##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921655_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2726282 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.919799565855623 33.0 31.0 34.0 28.0 34.0 2 31.064559352260698 33.0 31.0 34.0 28.0 34.0 3 31.133831716601584 34.0 31.0 34.0 27.0 34.0 4 34.61565201252108 37.0 35.0 37.0 32.0 37.0 5 34.308759695438695 37.0 35.0 37.0 30.0 37.0 6 34.2705648205138 37.0 35.0 37.0 30.0 37.0 7 34.13694914906088 37.0 35.0 37.0 30.0 37.0 8 34.06865577368739 37.0 35.0 37.0 30.0 37.0 9 35.61151084150502 39.0 37.0 39.0 30.0 39.0 10-11 35.484523061077326 39.0 37.0 39.0 30.0 39.0 12-13 35.38883395041306 39.0 37.0 39.0 30.0 39.0 14-15 36.56829557617297 40.0 37.0 41.0 30.0 41.0 16-17 36.52080654165637 40.0 37.0 41.0 29.5 41.0 18-19 36.46874626322589 40.0 37.0 41.0 29.0 41.0 20-21 36.40029718128939 40.0 37.0 41.0 29.0 41.0 22-23 36.29890744977959 40.0 37.0 41.0 28.0 41.0 24-25 36.202694732239735 40.0 37.0 41.0 27.5 41.0 26-27 36.06251664354605 40.0 36.0 41.0 27.0 41.0 28-29 35.929640440717435 40.0 36.0 41.0 27.0 41.0 30-31 35.76857383058686 40.0 36.0 41.0 27.0 41.0 32-33 35.719320121689535 40.0 36.0 41.0 26.5 41.0 34-35 35.854116522061915 40.0 36.0 41.0 27.0 41.0 36-37 35.84496541443622 40.0 36.0 41.0 27.0 41.0 38-39 35.73353068391311 40.0 36.0 41.0 26.0 41.0 40-41 35.642790070873076 40.0 36.0 41.0 26.0 41.0 42-43 35.515288220367516 40.0 35.0 41.0 25.0 41.0 44-45 35.38093839888904 40.0 35.0 41.0 25.0 41.0 46-47 35.21792536502093 40.0 35.0 41.0 24.0 41.0 48-49 35.063268216567465 39.0 35.0 41.0 24.0 41.0 50-51 34.89051572801346 39.0 35.0 41.0 23.5 41.0 52-53 34.70706772080071 39.0 35.0 41.0 23.0 41.0 54-55 34.482087142856095 39.0 34.5 41.0 22.5 41.0 56-57 34.238327876573294 38.0 34.0 40.0 22.0 41.0 58-59 33.98280882168463 38.0 34.0 40.0 21.0 41.0 60-61 33.69032147077962 37.5 34.0 40.0 20.0 41.0 62-63 33.37774082064878 37.0 33.5 40.0 18.5 41.0 64-65 33.03244436929121 36.5 33.0 39.5 17.5 41.0 66-67 32.67235341024883 36.0 33.0 39.0 14.0 41.0 68-69 32.30831531734428 35.0 33.0 39.0 12.5 40.0 70-71 31.917645716767375 35.0 32.0 38.0 8.0 40.0 72-73 31.56133463082689 35.0 32.0 37.0 7.0 39.0 74-75 31.16564317264318 35.0 32.0 37.0 3.5 39.0 76-77 28.52779022859704 32.0 27.5 34.5 2.0 36.0 78-79 30.080686260628944 34.5 30.5 35.0 2.0 37.0 80-81 30.269383724794427 35.0 31.0 35.0 2.0 37.0 82-83 30.112137152356212 35.0 31.0 35.0 2.0 36.5 84-85 29.92444838795106 35.0 31.0 35.0 2.0 36.0 86-87 29.72602815849571 34.5 31.0 35.0 2.0 36.0 88-89 29.47211293622597 34.0 31.0 35.0 2.0 35.0 90-91 29.277819389190114 34.0 31.0 35.0 2.0 35.0 92-93 29.119858473921628 34.0 30.0 35.0 2.0 35.0 94-95 29.006663654016716 34.0 30.0 35.0 2.0 35.0 96-97 28.794045700334742 34.0 30.0 35.0 2.0 35.0 98-99 28.579931203008346 34.0 30.0 35.0 2.0 35.0 100-101 27.442157304343425 33.0 27.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 76719.0 3 23923.0 4 12874.0 5 8770.0 6 7473.0 7 7430.0 8 7603.0 9 8008.0 10 8698.0 11 9240.0 12 9691.0 13 10327.0 14 10716.0 15 11176.0 16 11940.0 17 12517.0 18 11887.0 19 10989.0 20 10475.0 21 10711.0 22 11223.0 23 12596.0 24 14914.0 25 17736.0 26 21504.0 27 26068.0 28 31280.0 29 37181.0 30 45673.0 31 56784.0 32 71431.0 33 94660.0 34 134515.0 35 203204.0 36 357792.0 37 658624.0 38 594407.0 39 55523.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.109669309710746 19.700877839350035 13.46079109127869 26.728661759660532 2 15.326480270699031 21.177027262473523 36.36027179943329 27.136220667394156 3 17.70170169729531 24.55742627684156 28.554391841948203 29.186480183914927 4 13.360199138562848 16.936755312085726 34.16795603457194 35.53508951477949 5 14.747258770521846 36.829202701845 33.74261151200814 14.680927015625016 6 34.531643916665786 35.00317471729243 16.367675912534065 14.097505453507722 7 29.548300579323783 31.128107803961587 20.66950520892556 18.65408640778907 8 26.999958184809934 34.481979487081674 19.525126160830027 18.992936167278366 9 26.757036417009104 15.117627273197442 18.731194620070347 39.39414168972311 10-11 25.9921690659758 25.00027522026795 27.49984404184816 21.507711671908083 12-13 26.37992366137813 22.356667011459596 27.268829178578528 23.994580148583744 14-15 23.672857552643684 23.96335795650876 24.224586395946236 28.139198094901325 16-17 24.126686087499387 26.92243502322944 25.034534211794675 23.916344677476506 18-19 24.19253257233406 26.38980794060684 26.17216385938142 23.24549562767768 20-21 24.729525882820074 25.546647397412777 25.93176960159045 23.792057118176707 22-23 24.585754518424725 25.326470262430668 25.734736905426516 24.3530383137181 24-25 24.403626347950258 25.53069781448566 25.675272689525503 24.390403148038583 26-27 24.231802859983542 25.6648024753829 25.757000254382973 24.34639441025059 28-29 24.318278192532077 25.812695883367958 25.63486019649963 24.234165727600335 30-31 24.60724225705902 25.59213800316712 25.398416587439787 24.402203152334074 32-33 24.38370913573091 25.66152288472438 25.366230793357904 24.58853718618681 34-35 24.624112210763485 25.64085351023638 25.494632637481917 24.24040164151822 36-37 24.665773966674696 25.510030219869407 25.482152449951606 24.342043363504295 38-39 24.559546664651712 25.584458981132546 25.48243358537378 24.373560768841962 40-41 24.638115222462506 25.4567153251337 25.546603056256224 24.358566396147573 42-43 24.59390083188816 25.4306862274867 25.376193013460064 24.599219927165077 44-45 24.42474386392232 25.431973999391065 25.47225146638592 24.671030670300688 46-47 24.59917616917382 25.466566330413055 25.359107743419194 24.575149756993934 48-49 24.35892474226672 25.501687346651746 25.422891311911794 24.716496599169744 50-51 24.402528503992926 25.540524034029822 25.442126889582816 24.61482057239444 52-53 24.615132365048503 25.42584914439522 25.39065401500497 24.568364475551306 54-55 24.271733369036724 25.354976679694737 25.539356568659638 24.8339333826089 56-57 24.259872508659452 25.405332039650524 25.504100687162 24.830694764528026 58-59 24.310555864019367 25.325038010751417 25.53794224126688 24.826463883962333 60-61 24.258216145854828 25.353304863887914 25.614393999003333 24.77408499125393 62-63 24.294026995381167 25.393088755373185 25.566494483870773 24.746389765374875 64-65 24.14678895716102 25.20705781766876 25.525143979994162 25.12100924517605 66-67 24.097020735918765 25.369098032767813 25.421360350700706 25.112520880612717 68-69 24.148267727862557 25.30897519831367 25.408847637557173 25.133909436266595 70-71 24.07388715790926 25.112560574601222 25.48816622885463 25.32538603863488 72-73 24.069136664950108 25.249544702115845 25.34125555626697 25.34006307666708 74-75 23.97985961460884 25.333980782357884 25.360837564713563 25.325322038319715 76-77 23.96225731971541 25.033223607976314 25.589428432645168 25.41509063966312 78-79 23.900132830009706 25.09195041331112 25.566886067752666 25.441030688926507 80-81 23.928179620318534 25.22028432616505 25.38535763926994 25.466178414246478 82-83 23.825268012893456 25.162567002076813 25.493543823976538 25.51862116105319 84-85 23.820340956652238 25.127905993154737 25.496720032162052 25.55503301803097 86-87 23.74441022621895 25.24185572689953 25.455509098620244 25.55822494826127 88-89 23.572353393387207 25.038051694394685 25.535206553204326 25.85438835901378 90-91 23.481213377678156 25.027831999009763 25.56059890158094 25.93035572173114 92-93 23.537061046753788 24.967348348261286 25.629996143086714 25.865594461898212 94-95 23.421846536029996 24.84695715460629 25.693791786896274 26.03740452246744 96-97 23.26709926782343 24.774832363536113 25.702282922770657 26.255785445869794 98-99 23.181296987516948 24.7196521529893 25.660521242319135 26.438529617174616 100-101 23.092221468855264 24.72228177631824 25.655715050492805 26.529781704333686 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 41.5 2 43.0 3 67.0 4 61.0 5 64.0 6 116.5 7 262.5 8 374.0 9 374.0 10 324.5 11 273.0 12 257.0 13 284.0 14 333.0 15 344.0 16 368.5 17 419.0 18 477.0 19 506.0 20 584.5 21 671.0 22 770.0 23 936.0 24 1067.0 25 1301.0 26 1695.5 27 2192.0 28 2872.5 29 3956.5 30 5820.0 31 8624.0 32 13060.0 33 18150.5 34 23192.5 35 29383.5 36 37596.5 37 46019.5 38 53988.0 39 61770.5 40 68818.0 41 75653.5 42 82341.0 43 89930.5 44 97805.0 45 105382.0 46 110711.5 47 115795.0 48 122228.0 49 125156.0 50 124598.5 51 123885.5 52 123708.5 53 123747.0 54 122516.0 55 117076.5 56 108509.0 57 98073.0 58 88399.5 59 78700.5 60 66039.5 61 54315.5 62 44640.0 63 34483.0 64 25300.0 65 18670.5 66 14159.5 67 11244.5 68 8718.5 69 6752.5 70 5247.0 71 3946.0 72 3020.5 73 2359.0 74 1789.0 75 1340.0 76 967.5 77 624.0 78 368.5 79 226.5 80 139.5 81 83.0 82 49.5 83 32.0 84 20.0 85 11.0 86 7.5 87 7.0 88 6.5 89 3.5 90 2.0 91 2.0 92 1.5 93 0.5 94 1.0 95 1.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1436388458714102 2 2.567599389938385E-4 3 0.008766517917075342 4 0.00513519877987677 5 0.021604514866767267 6 0.0020173995206658737 7 0.0 8 0.0 9 3.667999128483407E-5 10-11 0.04372254961152221 12-13 2.9343993027867256E-4 14-15 0.004548318919319424 16-17 0.0 18-19 0.001540559633963031 20-21 1.6505996078175332E-4 22-23 0.0 24-25 4.7683988670284294E-4 26-27 0.0028426993245746403 28-29 0.006235598518421792 30-31 0.01689113598666609 32-33 0.01236115706298908 34-35 0.009866917655620365 36-37 0.003502939167701654 38-39 0.0 40-41 0.0037963790979803264 42-43 0.009335057781990272 44-45 0.007042558326688141 46-47 0.004236538993398335 48-49 0.009408417764559938 50-51 0.003117799259210896 52-53 0.0019256995424537888 54-55 0.004291558980325586 56-57 0.007867858130596908 58-59 0.014983776439854716 60-61 0.007391018243894066 62-63 0.021769574827549022 64-65 0.039504350613766295 66-67 0.05742252635640774 68-69 0.047904068617993296 70-71 0.06415330475717479 72-73 0.03185657243087839 74-75 0.026171173781729107 76-77 0.20913097031048145 78-79 0.07788996149334515 80-81 0.06363978487918712 82-83 0.026171173781729107 84-85 0.04883940839575657 86-87 0.06512532452622288 88-89 0.279208093660157 90-91 0.2838481125576885 92-93 0.04786738862670846 94-95 0.009096637838638849 96-97 0.013516576788461356 98-99 9.536797734056859E-4 100-101 9.169997821208518E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2726282.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.76625473588162 #Duplication Level Percentage of deduplicated Percentage of total 1 78.54534547549825 47.72906471481954 2 11.823947278384091 14.36993984603844 3 3.9708019139427133 7.238722818251077 4 1.8010783504925922 4.377791433812574 5 1.0084770565469923 3.064068685671332 6 0.6363018537347563 2.319940831977594 7 0.42030981449100013 1.7878457278745885 8 0.30152061103087135 1.4657822606416486 9 0.23995526677782325 1.3123064579613875 >10 1.191205794145123 12.641458094749394 >50 0.04644629103183592 1.883683399903524 >100 0.013762562949582006 1.388862111285007 >500 6.055221245410984E-4 0.24814758187958808 >1k 2.422088497733872E-4 0.1723860351342977 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.667999128483407E-5 2 0.0 0.0 0.0 0.0 7.335998256966814E-5 3 0.0 0.0 0.0 0.0 7.335998256966814E-5 4 0.0 0.0 0.0 0.0 7.335998256966814E-5 5 0.0 0.0 0.0 0.0 7.335998256966814E-5 6 0.0 0.0 0.0 0.0 1.1003997385450222E-4 7 0.0 0.0 0.0 0.0 1.1003997385450222E-4 8 0.0 0.0 0.0 0.0 1.1003997385450222E-4 9 0.0 0.0 0.0 0.0 1.1003997385450222E-4 10-11 0.0 0.0 0.0 3.667999128483407E-5 1.1003997385450222E-4 12-13 0.0 0.0 0.0 3.667999128483407E-5 2.017399520665874E-4 14-15 1.8339995642417035E-5 3.667999128483407E-5 0.0 3.667999128483407E-5 4.2181989977559185E-4 16-17 3.667999128483407E-5 3.667999128483407E-5 0.0 5.50199869272511E-5 5.31859873630094E-4 18-19 3.667999128483407E-5 3.667999128483407E-5 0.0 1.1003997385450222E-4 5.501998692725111E-4 20-21 3.667999128483407E-5 3.667999128483407E-5 0.0 1.4671996513933628E-4 5.685398649149282E-4 22-23 3.667999128483407E-5 3.667999128483407E-5 0.0 2.200799477090044E-4 7.152598300542644E-4 24-25 3.667999128483407E-5 3.667999128483407E-5 0.0 5.31859873630094E-4 7.702798169815154E-4 26-27 3.667999128483407E-5 3.667999128483407E-5 0.0 7.702798169815154E-4 7.702798169815154E-4 28-29 3.667999128483407E-5 3.667999128483407E-5 0.0 0.0025492593942959677 7.702798169815154E-4 30-31 3.667999128483407E-5 3.667999128483407E-5 0.0 0.010875617415953302 7.886198126239325E-4 32-33 3.667999128483407E-5 5.50199869272511E-5 0.0 0.03501105168137412 8.436397995511836E-4 34-35 3.667999128483407E-5 7.335998256966814E-5 0.0 0.06884834364163356 9.536797734056859E-4 36-37 3.667999128483407E-5 7.335998256966814E-5 0.0 0.125115450272569 9.536797734056859E-4 38-39 3.667999128483407E-5 7.335998256966814E-5 0.0 0.21274394945203762 9.9035976469052E-4 40-41 3.667999128483407E-5 7.335998256966814E-5 0.0 0.31174324592980474 9.9035976469052E-4 42-43 5.50199869272511E-5 7.335998256966814E-5 0.0 0.41749166080398137 9.9035976469052E-4 44-45 7.335998256966814E-5 7.335998256966814E-5 0.0 0.5526024087016677 0.0010086997603329369 46-47 7.335998256966814E-5 7.335998256966814E-5 0.0 0.7116285109170658 0.001027039755975354 48-49 7.335998256966814E-5 7.335998256966814E-5 0.0 0.8796228710016059 0.001063719747260188 50-51 7.335998256966814E-5 7.335998256966814E-5 0.0 1.0548615293649006 0.0011003997385450222 52-53 7.335998256966814E-5 7.335998256966814E-5 0.0 1.2339882668043878 0.0012287797080419412 54-55 7.335998256966814E-5 7.335998256966814E-5 0.0 1.4446414567531898 0.0013571596775388607 56-57 1.1003997385450222E-4 7.335998256966814E-5 0.0 1.6909109182395659 0.0013754996731812777 58-59 1.1003997385450222E-4 7.335998256966814E-5 0.0 1.946038597621229 0.001430519660108529 60-61 1.1003997385450222E-4 7.335998256966814E-5 0.0 2.2153247536388383 0.0014671996513933628 62-63 1.1003997385450222E-4 7.335998256966814E-5 0.0 2.492001927900342 0.0014671996513933628 64-65 1.1003997385450222E-4 7.335998256966814E-5 0.0 2.803176633965232 0.0015222196383206138 66-67 1.1003997385450222E-4 7.335998256966814E-5 0.0 3.1629706684781693 0.001558899629605448 68-69 1.1003997385450222E-4 7.335998256966814E-5 0.0 3.5511183362542837 0.001577239625247865 70-71 1.1003997385450222E-4 7.335998256966814E-5 0.0 3.9614390587620796 0.0016139196165326991 72-73 1.1003997385450222E-4 7.335998256966814E-5 0.0 4.388467517300118 0.0017606395816720352 74-75 1.1003997385450222E-4 7.335998256966814E-5 0.0 4.837338910648275 0.0018523395598841206 76-77 1.1003997385450222E-4 7.335998256966814E-5 0.0 5.352179268322206 0.0018706795555265376 78-79 1.1003997385450222E-4 7.335998256966814E-5 0.0 5.9216361330192555 0.0018706795555265376 80-81 1.1003997385450222E-4 7.335998256966814E-5 0.0 6.4998595156333785 0.0019073595468113718 82-83 1.1003997385450222E-4 7.335998256966814E-5 0.0 7.099705753109913 0.002054079511950708 84-85 1.1003997385450222E-4 7.335998256966814E-5 0.0 7.738946301226359 0.002054079511950708 86-87 1.1003997385450222E-4 7.335998256966814E-5 0.0 8.417636179969644 0.002054079511950708 88-89 1.1003997385450222E-4 7.335998256966814E-5 0.0 9.151180985679398 0.002054079511950708 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3295 0.0 44.415085 1 GGTATCA 1785 0.0 38.86421 1 TCAACGC 4290 0.0 33.85112 4 CAACGCA 4410 0.0 33.059456 5 TATCAAC 4590 0.0 31.947641 2 ATCAACG 4575 0.0 31.741201 3 AACGCAG 4875 0.0 29.9991 6 GTACATG 7210 0.0 26.624489 1 TACATGG 7625 0.0 24.770582 2 ACGCAGA 5995 0.0 23.680899 7 ACATGGG 7985 0.0 22.702906 3 CGCAGAG 6335 0.0 21.810347 8 CATGGGG 6875 0.0 20.294744 4 GCAGAGT 7205 0.0 18.3204 9 AGAGTAC 5885 0.0 17.911446 10-11 TAAGGCG 655 0.0 16.675636 5 TAAGGTA 635 0.0 16.442123 4 GTATAAT 810 0.0 16.425106 1 GTATTAA 1455 0.0 15.675212 1 GTATATA 615 0.0 15.45219 1 >>END_MODULE