##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921654_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3247286 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.30750201860877 31.0 31.0 34.0 26.0 34.0 2 30.355972649159945 31.0 31.0 34.0 26.0 34.0 3 30.416837937896446 33.0 31.0 34.0 26.0 34.0 4 33.87199772363753 37.0 35.0 37.0 30.0 37.0 5 33.86624461165416 37.0 35.0 37.0 30.0 37.0 6 33.914959446134404 37.0 35.0 37.0 30.0 37.0 7 33.81535904136562 37.0 35.0 37.0 29.0 37.0 8 33.78409323970848 37.0 35.0 37.0 29.0 37.0 9 35.33893873222131 39.0 37.0 39.0 29.0 39.0 10-11 35.2358611160212 39.0 35.0 39.0 29.0 39.0 12-13 35.124229125491254 39.0 35.0 39.0 28.0 39.0 14-15 36.25977077473311 40.0 37.0 41.0 27.0 41.0 16-17 36.19860846873358 40.0 36.5 41.0 27.0 41.0 18-19 36.16163821110922 40.0 36.5 41.0 27.0 41.0 20-21 36.08272477385731 40.0 36.5 41.0 27.0 41.0 22-23 35.984470262243605 40.0 36.0 41.0 27.0 41.0 24-25 35.87174351135071 40.0 36.0 41.0 27.0 41.0 26-27 35.722049736302864 40.0 36.0 41.0 26.5 41.0 28-29 35.581860513672034 40.0 36.0 41.0 25.5 41.0 30-31 35.436802455958606 40.0 36.0 41.0 25.0 41.0 32-33 35.255214970285955 39.0 35.0 41.0 25.0 41.0 34-35 35.08128942138143 39.0 35.0 41.0 24.0 41.0 36-37 35.04883354900061 39.0 35.0 41.0 24.0 41.0 38-39 35.226799548915615 39.5 35.0 41.0 24.5 41.0 40-41 35.28135187353377 40.0 35.0 41.0 24.0 41.0 42-43 35.11634885254948 40.0 35.0 41.0 23.5 41.0 44-45 34.99299107008129 40.0 35.0 41.0 23.0 41.0 46-47 34.83368973351901 40.0 35.0 41.0 22.0 41.0 48-49 34.66336981097446 39.0 35.0 41.0 20.5 41.0 50-51 32.9561515370066 37.0 32.5 39.5 17.0 40.0 52-53 33.071072427867456 37.5 32.5 39.5 16.0 40.0 54-55 33.98044505473186 38.5 34.0 40.5 18.0 41.0 56-57 34.00145690893873 39.0 34.0 41.0 17.5 41.0 58-59 33.80749647551832 38.0 34.0 41.0 14.5 41.0 60-61 33.553732871080655 38.0 34.0 40.0 13.0 41.0 62-63 33.26040838410907 37.0 33.5 40.0 10.5 41.0 64-65 32.961780237404405 37.0 33.0 40.0 8.0 41.0 66-67 32.620372982238095 36.0 33.0 39.0 6.5 41.0 68-69 32.25440475523253 36.0 33.0 39.0 2.0 41.0 70-71 31.845623391348962 35.0 32.0 39.0 2.0 40.5 72-73 31.48255866591363 35.0 32.0 37.5 2.0 40.0 74-75 31.083307260278275 35.0 32.0 37.0 2.0 39.0 76-77 30.70229801132392 35.0 31.0 36.5 2.0 39.0 78-79 30.35111135883935 35.0 31.0 36.0 2.0 38.5 80-81 30.030214924093535 35.0 31.0 35.5 2.0 37.0 82-83 29.704036848001685 35.0 31.0 35.0 2.0 37.0 84-85 29.428122130295883 35.0 31.0 35.0 2.0 36.5 86-87 29.17483015047027 35.0 30.0 35.0 2.0 36.0 88-89 28.92621176576378 34.5 30.0 35.0 2.0 36.0 90-91 28.676224699641487 34.0 30.0 35.0 2.0 35.5 92-93 28.459314024080417 34.0 30.0 35.0 2.0 35.0 94-95 28.201406035686418 34.0 29.0 35.0 2.0 35.0 96-97 27.93542361221032 34.0 29.0 35.0 2.0 35.0 98-99 27.62242100018292 34.0 29.0 35.0 2.0 35.0 100-101 26.51405958699049 33.0 26.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 117343.0 3 20697.0 4 13610.0 5 10260.0 6 9287.0 7 9689.0 8 10176.0 9 10883.0 10 11769.0 11 12547.0 12 12545.0 13 12685.0 14 13568.0 15 14220.0 16 14708.0 17 15355.0 18 14387.0 19 13800.0 20 13977.0 21 14710.0 22 16310.0 23 18711.0 24 21973.0 25 26031.0 26 30556.0 27 36066.0 28 42728.0 29 50160.0 30 59523.0 31 72528.0 32 89861.0 33 115833.0 34 159238.0 35 232541.0 36 386925.0 37 688460.0 38 707863.0 39 125747.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.13530933790639 17.480714329288773 11.537449540526868 25.84652679227797 2 16.699922497222687 19.588110488452397 37.75873678177037 25.95323023255456 3 19.44753366324033 22.769930699808977 29.426342084527807 28.356193552422887 4 13.354758073412759 14.80849314578828 35.8869429469998 35.949805833799154 5 14.127045607703678 36.8620903969948 34.63740102246105 14.373462972840473 6 34.58192496685366 34.80062150346554 16.352717075792317 14.264736453888476 7 29.46790047599908 31.435250419251858 20.709455765656305 18.387393339092753 8 27.23894525975498 34.20978873655888 19.79258040035087 18.75868560333527 9 26.846447816316243 14.72101369269853 18.9467145499974 39.48582394098783 10-11 25.925645882807498 24.69465447250562 27.984084288347383 21.395615356339498 12-13 26.170801146691 22.234156225098637 27.662934818064294 23.932107810146068 14-15 23.177708177918436 23.993708594429076 24.5248828910398 28.303700336612685 16-17 23.717888592407775 27.11067986585192 25.564218964780355 23.607212576959952 18-19 23.82121160044817 26.38622743979171 26.77728336933604 23.01527759042408 20-21 24.08464432476786 25.709764969450543 26.67159589486976 23.53399481091184 22-23 24.001025844820177 25.615437578266874 26.388333094585665 23.99520348232728 24-25 23.777321787840634 25.796206794893557 26.4339269656916 23.992544451574208 26-27 23.60663099756191 25.970118590199192 26.464558851635733 23.95869156060316 28-29 23.784029091213718 26.19858504643365 26.32504448101276 23.692341381339872 30-31 23.96363089264405 25.946105433945515 26.093200649916927 23.997063023493503 32-33 23.664480896363443 26.039560065925745 26.09998532485429 24.19597371285652 34-35 24.045342690211204 26.000598381106556 26.214389510376122 23.73966941830612 36-37 24.124216031844675 25.826727255146025 26.230313414809153 23.818743298200147 38-39 23.90204220404117 25.935161365177223 26.283928369878417 23.878868060903187 40-41 23.993369144224808 25.80284259601145 26.406354559852772 23.79743369991097 42-43 23.870228405672574 25.750633517142425 26.22059590811428 24.15854216907072 44-45 23.783779447483262 25.779784413814895 26.41020245453289 24.026233684168954 46-47 23.986317036884355 25.854965342860144 26.169808645562842 23.988908974692656 48-49 23.723430567185382 26.00091742567209 26.148298017999505 24.127353989143025 50-51 23.77833634232039 26.011764825676742 26.227186905151644 23.982711926851223 52-53 24.06225708790305 25.78545756731645 26.220126537241097 23.932158807539405 54-55 23.49416123171412 25.71162495618301 26.529783827951043 24.264429984151825 56-57 23.50695358930244 25.94086799173441 26.37213756623063 24.180040852732517 58-59 23.597482949142222 25.69524649813394 26.457564615502598 24.24970593722124 60-61 23.481458323431724 25.73462740423935 26.583383072846424 24.2005311994825 62-63 23.60684101169509 25.69398554857957 26.601191494666537 24.097981945058805 64-65 23.389667538343307 25.628280648300304 26.552327830234894 24.429723983121495 66-67 23.335816264722865 25.765437656771045 26.417855136073175 24.480890942432918 68-69 23.592453549756073 25.56467396351862 26.511019484773097 24.33185300195221 70-71 23.44456362226387 25.475346466273095 26.49629911990617 24.58379079155686 72-73 23.45783333281906 25.68897473795293 26.361256221400076 24.491935707827935 74-75 23.447114293529665 25.801765981051645 26.372370432985182 24.378749292433508 76-77 23.51615541247161 25.541461596502756 26.452643428526823 24.489739562498812 78-79 23.466252036351438 25.596046507967806 26.443776641525307 24.493924814155445 80-81 23.641693112385237 25.683541774204873 26.321525927606242 24.353239185803645 82-83 23.579282506532895 25.733540608263656 26.31254318870691 24.37463369649654 84-85 23.569110800683816 25.71927329152389 26.344794745854326 24.366821161937967 86-87 23.64175523003738 25.830522265248874 26.227886423023445 24.299836081690305 88-89 23.512068501215687 25.592522089512393 26.23856750544184 24.656841903830085 90-91 23.509292982639447 25.605841475345397 26.298615362794948 24.586250179220208 92-93 23.710080611184452 25.480582109236998 26.45600614591992 24.353331133658635 94-95 23.67993150181771 25.274971186439632 26.494940727712933 24.550156584029725 96-97 23.792875447823437 25.131700065255814 26.430719869809398 24.644704617111344 98-99 23.71283706669963 25.196522407991555 26.346202609104562 24.74443791620425 100-101 23.9104639601527 25.048146866541117 26.443410492822032 24.59797868048415 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 58.5 2 107.5 3 175.5 4 155.5 5 149.0 6 237.0 7 418.5 8 671.0 9 764.0 10 672.0 11 629.5 12 681.5 13 773.0 14 892.5 15 1000.5 16 1093.5 17 1187.5 18 1335.5 19 1462.5 20 1578.0 21 1760.0 22 1932.5 23 2199.5 24 2614.0 25 3235.5 26 4096.0 27 5383.5 28 7436.5 29 10537.0 30 14937.0 31 20845.0 32 29987.0 33 35786.0 34 38896.0 35 45593.5 36 54647.0 37 63641.5 38 72198.5 39 80057.5 40 86855.0 41 93845.0 42 100800.0 43 109014.0 44 116652.5 45 125602.5 46 131641.0 47 135393.5 48 140073.0 49 141873.5 50 141523.0 51 140428.0 52 139089.0 53 137710.0 54 135634.0 55 129184.0 56 118885.0 57 107404.0 58 97611.5 59 86123.0 60 70787.5 61 57710.5 62 47620.5 63 36765.0 64 26634.5 65 19811.0 66 15090.0 67 11762.0 68 9032.0 69 6846.0 70 5303.0 71 3948.5 72 2818.5 73 2051.0 74 1587.0 75 1206.0 76 818.5 77 553.5 78 374.5 79 252.0 80 186.5 81 148.5 82 124.5 83 105.0 84 85.5 85 72.5 86 60.5 87 42.5 88 43.0 89 46.5 90 40.0 91 27.5 92 23.0 93 25.5 94 20.5 95 13.5 96 13.5 97 11.0 98 8.0 99 8.0 100 5.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.049641454433025 2 0.06901147604491874 3 0.06556244199001873 4 0.0655316470431 5 0.06094319995220625 6 0.00988517796091875 7 0.01327262212198125 8 0.016444501654612496 9 0.0069904529505562495 10-11 0.013288019595440622 12-13 0.022387926409931248 14-15 0.03912498006027187 16-17 0.026899386133528123 18-19 0.009484843650975 20-21 0.02049403717442812 22-23 0.03636883231104375 24-25 0.03427477592056875 26-27 0.021109936112803124 28-29 0.012164004032906248 30-31 0.012610530763228121 32-33 0.009223086602165623 34-35 0.005897232334940624 36-37 7.390787260499999E-4 38-39 0.004080330466734374 40-41 0.0013241827175062499 42-43 0.22294001821829057 44-45 0.19283795760521247 46-47 0.1991663191970156 48-49 0.20621836204140934 50-51 0.1982886632098312 52-53 0.2050635515319562 54-55 0.20121418316711245 56-57 0.2039087410225031 58-59 0.21268530089434684 60-61 0.21778186460939997 62-63 0.20221501894197186 64-65 0.20313886734953435 66-67 0.19995159034344373 68-69 0.1953939381994687 70-71 0.1877721888370781 72-73 0.19881217730744996 74-75 0.19784213647950935 76-77 0.19155996730808436 78-79 0.2096827935697687 80-81 0.22044562751787183 82-83 0.22002989573446874 84-85 0.21400948361185312 86-87 0.23288678607304683 88-89 0.2261426926978406 90-91 0.23270201639153434 92-93 0.22828294150869372 94-95 0.23071574231527497 96-97 0.23798334978809998 98-99 0.2314394235678656 100-101 0.23770619526583123 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3247286.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.143119555538256 #Duplication Level Percentage of deduplicated Percentage of total 1 78.61550004007667 45.709504177486004 2 11.608374422903397 13.498942038326492 3 3.916600914810769 6.831701857235191 4 1.7499814242561034 4.0699751668197495 5 1.0391173236544913 3.0208761390737013 6 0.6441571340862098 2.247198315583643 7 0.4356790250419885 1.7732216348599679 8 0.31699826626339295 1.4745014475400644 9 0.24366899181947257 1.275090779100336 >10 1.3379126982549654 13.797466515731086 >50 0.06648264049893723 2.617421561343275 >100 0.02334793761650227 2.3380364597209446 >500 0.0013287687315730818 0.5342597713558335 >1k 8.504119855123099E-4 0.8118041358238505 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 3.079494691875E-5 0.0 0.0 0.0 3 0.0 3.079494691875E-5 0.0 0.0 0.0 4 0.0 3.079494691875E-5 0.0 0.0 0.0 5 0.0 3.079494691875E-5 0.0 0.0 0.0 6 0.0 3.079494691875E-5 0.0 0.0 0.0 7 0.0 3.079494691875E-5 0.0 0.0 0.0 8 0.0 3.079494691875E-5 0.0 0.0 0.0 9 0.0 3.079494691875E-5 0.0 0.0 0.0 10-11 0.0 3.079494691875E-5 0.0 0.0 0.0 12-13 0.0 3.079494691875E-5 0.0 0.0 6.15898938375E-5 14-15 0.0 3.079494691875E-5 0.0 0.0 1.23179787675E-4 16-17 0.0 3.079494691875E-5 0.0 0.0 1.847696815125E-4 18-19 0.0 3.079494691875E-5 0.0 3.079494691875E-5 2.1556462843124998E-4 20-21 0.0 3.079494691875E-5 0.0 3.079494691875E-5 2.1556462843124998E-4 22-23 0.0 3.079494691875E-5 0.0 9.238484075625E-5 2.3096210189062498E-4 24-25 0.0 4.6192420378125E-5 0.0 4.7732167724062497E-4 2.4635957535E-4 26-27 0.0 6.15898938375E-5 0.0 0.001108618089075 2.4635957535E-4 28-29 0.0 6.15898938375E-5 0.0 0.006975055477096874 2.4635957535E-4 30-31 0.0 6.15898938375E-5 0.0 0.029024237470921872 2.4635957535E-4 32-33 1.5397473459375E-5 6.15898938375E-5 0.0 0.07246051009981874 2.4635957535E-4 34-35 3.079494691875E-5 9.238484075625E-5 0.0 0.13274161869327186 3.0794946918749996E-4 36-37 3.079494691875E-5 1.23179787675E-4 0.0 0.22531122913103435 3.0794946918749996E-4 38-39 3.079494691875E-5 1.23179787675E-4 0.0 0.3718489840439062 3.0794946918749996E-4 40-41 3.079494691875E-5 1.23179787675E-4 0.0 0.5375104009933218 3.0794946918749996E-4 42-43 3.079494691875E-5 1.23179787675E-4 0.0 0.7104548228890217 3.2334694264687496E-4 44-45 3.079494691875E-5 1.23179787675E-4 0.0 0.9232325086241249 3.3874441610624997E-4 46-47 4.6192420378125E-5 1.23179787675E-4 0.0 1.1735646321266435 3.3874441610624997E-4 48-49 6.15898938375E-5 1.23179787675E-4 0.0 1.429224281446106 3.3874441610624997E-4 50-51 6.15898938375E-5 1.23179787675E-4 0.0 1.696647600488531 3.3874441610624997E-4 52-53 6.15898938375E-5 1.23179787675E-4 0.0 1.9646560235224122 4.0033430994374994E-4 54-55 6.15898938375E-5 1.23179787675E-4 0.0 2.271512272094297 4.6192420378124996E-4 56-57 6.15898938375E-5 1.23179787675E-4 0.0 2.6294727350778464 4.6192420378124996E-4 58-59 6.15898938375E-5 1.23179787675E-4 0.0 2.997333773495775 4.6192420378124996E-4 60-61 6.15898938375E-5 1.23179787675E-4 0.0 3.3784982289826027 4.6192420378124996E-4 62-63 6.15898938375E-5 1.23179787675E-4 0.0 3.7728891141710337 4.927191507E-4 64-65 6.15898938375E-5 1.23179787675E-4 0.0 4.197027918082977 4.927191507E-4 66-67 6.15898938375E-5 1.23179787675E-4 0.0 4.695767480905593 4.927191507E-4 68-69 6.15898938375E-5 1.23179787675E-4 0.0 5.22574851737728 4.927191507E-4 70-71 6.15898938375E-5 1.5397473459375E-4 3.079494691875E-5 5.775700076925777 4.927191507E-4 72-73 6.15898938375E-5 1.847696815125E-4 3.079494691875E-5 6.334797735709143 6.005014649156249E-4 74-75 6.15898938375E-5 1.847696815125E-4 3.079494691875E-5 6.913973699883533 6.312964118343749E-4 76-77 6.15898938375E-5 1.847696815125E-4 3.079494691875E-5 7.571353431758089 6.466938852937499E-4 78-79 6.15898938375E-5 1.847696815125E-4 3.079494691875E-5 8.29047703220474 6.466938852937499E-4 80-81 6.15898938375E-5 1.847696815125E-4 3.079494691875E-5 9.016375520973515 6.928863056718749E-4 82-83 6.15898938375E-5 1.847696815125E-4 3.079494691875E-5 9.756131735855726 7.3907872605E-4 84-85 6.15898938375E-5 1.847696815125E-4 3.079494691875E-5 10.528607581839111 7.3907872605E-4 86-87 6.15898938375E-5 1.847696815125E-4 3.079494691875E-5 11.362688719133455 7.3907872605E-4 88-89 6.15898938375E-5 2.1556462843124998E-4 3.079494691875E-5 12.25241632550998 7.54476199509375E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2310 0.0 44.99861 1 GTATCAA 3925 0.0 40.873703 1 CAACGCA 4410 0.0 36.270336 5 TCAACGC 4465 0.0 35.825764 4 ATCAACG 4670 0.0 34.14989 3 AACGCAG 4960 0.0 32.422825 6 TATCAAC 5125 0.0 31.211145 2 GTACATG 7185 0.0 30.057411 1 TACATGG 7680 0.0 27.626123 2 ACGCAGA 5905 0.0 27.077988 7 ACATGGG 7880 0.0 25.900564 3 CGCAGAG 6075 0.0 25.618519 8 CATGGGG 6800 0.0 22.686186 4 GCAGAGT 7100 0.0 20.584114 9 GAGTACA 5430 0.0 20.19199 1 CAGAGTA 6520 0.0 17.794035 10-11 AGAGTAC 5815 0.0 17.625732 10-11 TATACCG 245 3.793628E-6 17.43559 5 GTATATG 830 0.0 17.155767 1 GTACCGT 370 2.7976057E-9 16.667652 6 >>END_MODULE