##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921654_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3247286 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.274712482978092 33.0 31.0 34.0 28.0 34.0 2 31.394972909685194 34.0 31.0 34.0 28.0 34.0 3 31.472944483485595 34.0 31.0 34.0 28.0 34.0 4 34.94179293108152 37.0 35.0 37.0 32.0 37.0 5 34.66651720852429 37.0 35.0 37.0 32.0 37.0 6 34.63739381132429 37.0 35.0 37.0 32.0 37.0 7 34.51068061143983 37.0 35.0 37.0 31.0 37.0 8 34.45293269517991 37.0 35.0 37.0 31.0 37.0 9 36.03620561909237 39.0 37.0 39.0 31.0 39.0 10-11 35.923907225911115 39.0 37.0 39.0 31.0 39.0 12-13 35.84180589575418 39.0 37.0 39.0 30.0 39.0 14-15 37.0774953299463 40.0 38.0 41.0 31.0 41.0 16-17 37.03561050674317 40.0 38.0 41.0 31.0 41.0 18-19 36.99185027127268 40.0 38.0 41.0 31.0 41.0 20-21 36.928503833662944 40.0 37.5 41.0 30.0 41.0 22-23 36.836562748091794 40.0 37.0 41.0 30.0 41.0 24-25 36.74886997942282 40.0 37.0 41.0 30.0 41.0 26-27 36.619113622883845 40.0 37.0 41.0 30.0 41.0 28-29 36.49550655532035 40.0 37.0 41.0 30.0 41.0 30-31 36.33398382526208 40.0 37.0 41.0 29.0 41.0 32-33 36.27647149034609 40.0 36.5 41.0 29.5 41.0 34-35 36.40076174380698 40.0 37.0 41.0 30.0 41.0 36-37 36.391804879520926 40.0 37.0 41.0 30.0 41.0 38-39 36.27825020648012 40.0 37.0 41.0 29.0 41.0 40-41 36.18635623717775 40.0 36.5 41.0 28.5 41.0 42-43 36.0581853584809 40.0 36.0 41.0 28.0 41.0 44-45 35.92153293550368 40.0 36.0 41.0 27.5 41.0 46-47 35.761693303269254 40.0 35.5 41.0 27.0 41.0 48-49 35.61299220333534 40.0 35.0 41.0 26.5 41.0 50-51 35.44896984743568 39.5 35.0 41.0 26.0 41.0 52-53 35.266746292134414 39.0 35.0 41.0 26.0 41.0 54-55 35.04706484122433 39.0 35.0 41.0 25.5 41.0 56-57 34.81436759804957 39.0 35.0 41.0 25.0 41.0 58-59 34.5666030032464 38.0 34.5 40.0 24.0 41.0 60-61 34.28371015056881 38.0 34.0 40.0 23.5 41.0 62-63 33.97523932292998 37.0 34.0 40.0 23.0 41.0 64-65 33.63289590137734 37.0 34.0 40.0 22.0 41.0 66-67 33.283111958724916 36.0 34.0 39.0 22.0 41.0 68-69 32.92170800477692 36.0 33.0 39.0 21.0 41.0 70-71 32.527492496811185 35.0 33.0 38.5 20.0 40.0 72-73 32.16764769102568 35.0 33.0 37.5 18.5 39.5 74-75 31.775254628018597 35.0 32.5 37.0 17.5 39.0 76-77 29.092137403357757 33.0 28.5 34.5 9.0 36.5 78-79 30.65754617856265 34.5 31.0 36.0 10.5 37.0 80-81 30.846303343776924 35.0 32.0 35.5 10.5 37.0 82-83 30.681284771344437 35.0 32.0 35.0 7.0 37.0 84-85 30.4908706840112 35.0 32.0 35.0 6.5 36.0 86-87 30.286664463801465 35.0 32.0 35.0 2.0 36.0 88-89 30.019515219786616 35.0 31.0 35.0 2.0 36.0 90-91 29.823756207491424 34.0 31.0 35.0 2.0 35.0 92-93 29.66907334309328 34.0 31.0 35.0 2.0 35.0 94-95 29.563543833219494 34.0 31.0 35.0 2.0 35.0 96-97 29.36295401760116 34.0 31.0 35.0 2.0 35.0 98-99 29.159565403232115 34.0 31.0 35.0 2.0 35.0 100-101 28.043162659525525 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 69945.0 3 23743.0 4 12938.0 5 8863.0 6 7709.0 7 7542.0 8 7910.0 9 8399.0 10 9290.0 11 9850.0 12 10553.0 13 11402.0 14 12273.0 15 13147.0 16 13913.0 17 14656.0 18 14013.0 19 12735.0 20 12245.0 21 11930.0 22 12903.0 23 14505.0 24 16862.0 25 20557.0 26 24385.0 27 29455.0 28 35577.0 29 42481.0 30 51718.0 31 64147.0 32 81296.0 33 106619.0 34 151499.0 35 227802.0 36 404694.0 37 773899.0 38 796438.0 39 99393.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.206098763535735 18.925395434455858 12.001386769613335 26.867119032395077 2 15.827374241634304 20.79571850771061 36.24683927682222 27.130067973832862 3 18.10659044425466 23.840733676646273 29.203394283134315 28.849281595964754 4 13.034197707546666 15.905815947761209 34.824022378197824 36.235963966494296 5 13.95423620642497 37.266708638987936 34.615737649172175 14.163317505414922 6 34.74306313897004 35.240781493573884 16.026734269149774 13.989421098306304 7 29.330400833188087 31.611536526194488 20.740550724512715 18.31751191610471 8 27.21133894581506 34.64767193280789 19.567386426696014 18.573602694681036 9 26.69885766109227 14.667391374640662 18.814270998695832 39.81947996557123 10-11 25.88821039269935 24.936008429510682 27.937188437767656 21.238592740022305 12-13 26.097882746538403 22.337435134034003 27.709619733234625 23.85506238619297 14-15 23.129701077382844 24.127998649883835 24.488332458714286 28.25396781401903 16-17 23.69586844150291 27.304420877067937 25.482899486355603 23.516811195073547 18-19 23.781508749141192 26.55403846905966 26.68464197056386 22.97981081123529 20-21 24.080356544828707 25.83932232462424 26.625396197276025 23.454924933271023 22-23 23.94778285620669 25.7074677130379 26.38851336161952 23.95623606913589 24-25 23.751719138499894 25.963549028629007 26.413204215484658 23.87152761738644 26-27 23.57013569435088 26.11566163025695 26.452707150418632 23.861495524973535 28-29 23.752131903625944 26.321364492232757 26.310693425329323 23.615810178811973 30-31 23.932478441359077 26.0836916943407 26.091899963224492 23.891929901075727 32-33 23.63929987675882 26.166552531649174 26.064346894893582 24.12980069669842 34-35 23.97202970361828 26.136449206323054 26.186219074579192 23.705302015479475 36-37 24.070962514524272 26.001731979818615 26.18550846572888 23.741797039928233 38-39 23.860082521231966 26.08235401537684 26.245613451604427 23.811950011786767 40-41 23.920389016264956 25.95057534803436 26.347829568254156 23.781206067446526 42-43 23.87407891503074 25.959643805054906 26.096847969162784 24.069429310751573 44-45 23.735490586782383 25.938904167808737 26.313523435262375 24.012081810146505 46-47 23.929281446041895 25.982541324270624 26.124527220533306 23.963650009154172 48-49 23.639300352620136 26.136129327619507 26.13676068381728 24.087809635943078 50-51 23.737813279329583 26.112610873058546 26.162531080795592 23.987044766816272 52-53 23.986412358526866 25.906488189650485 26.119917202908155 23.987182248914493 54-55 23.400371401470824 25.878121188977442 26.373815888345508 24.347691521206226 56-57 23.445890645631945 26.02843382955871 26.232683120252847 24.292992404556497 58-59 23.44494269793924 25.864566661394782 26.29476138784037 24.3957292528256 60-61 23.354360715434012 25.973995976638385 26.3814906887389 24.290152619188703 62-63 23.47419264768867 25.881214550245033 26.35982522555627 24.28476757651002 64-65 23.172947975525215 25.781488518164004 26.32582788475372 24.71973562155706 66-67 23.1582113090373 25.92244852115659 26.204488074176435 24.71485209562968 68-69 23.347201270883556 25.724854696304185 26.251580593637698 24.67636343917457 70-71 23.18728748427607 25.601238068765575 26.222383356332436 24.98909109062592 72-73 23.093316443600095 25.749721940136226 26.140276484152707 25.016685132110972 74-75 22.95679733758341 25.787001128027764 26.162697212335978 25.09350432205285 76-77 22.94756806306153 25.501495365755044 26.38263462149808 25.16830194968534 78-79 22.819822475678205 25.572175291668124 26.308960248809587 25.299041983844084 80-81 22.867903759567174 25.60253503687581 26.204800434873583 25.32476076868343 82-83 22.703316024860868 25.62285396041815 26.219594275112613 25.45423573960837 84-85 22.634035722318593 25.505840232438477 26.288979815688364 25.571144229554566 86-87 22.600621246252032 25.638826658120422 26.188041009648423 25.572511085979126 88-89 22.43057520227022 25.427056089603024 26.19370006560115 25.948668642525607 90-91 22.299886661499333 25.349154084610536 26.27014715781973 26.0808120960704 92-93 22.30712657362415 25.181283165922743 26.478495741790535 26.033094518662576 94-95 22.092401213184388 24.99548813178474 26.618744364014447 26.293366291016422 96-97 22.06584872800945 24.873872762599593 26.57159519597711 26.488683313413848 98-99 21.9059212708318 24.899230397082587 26.518904097270962 26.67594423481465 100-101 21.748715040565468 24.786271224099295 26.559107980013437 26.905905755321797 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 61.0 1 51.0 2 77.0 3 127.5 4 116.0 5 117.5 6 229.0 7 436.0 8 613.5 9 638.5 10 533.5 11 466.5 12 479.0 13 507.5 14 568.0 15 612.0 16 661.5 17 720.0 18 771.5 19 861.0 20 1015.0 21 1207.5 22 1389.0 23 1718.5 24 2145.5 25 2690.5 26 3605.0 27 5140.5 28 7532.5 29 10806.0 30 15334.0 31 21349.5 32 30445.5 33 36372.5 34 39283.0 35 45465.0 36 54145.0 37 62906.5 38 71227.5 39 79668.0 40 86738.0 41 93526.0 42 100525.5 43 109114.5 44 117252.0 45 125518.5 46 131525.0 47 135650.5 48 141014.5 49 143065.5 50 142335.0 51 141391.0 52 140555.0 53 139951.5 54 138175.0 55 131336.5 56 120603.5 57 108743.5 58 98356.5 59 86738.0 60 70921.0 61 57112.0 62 47042.0 63 36138.0 64 25921.5 65 19083.5 66 14289.5 67 11170.5 68 8629.5 69 6457.5 70 4828.0 71 3505.5 72 2493.5 73 1792.5 74 1293.5 75 907.5 76 602.5 77 369.0 78 203.0 79 121.0 80 80.0 81 44.0 82 25.5 83 23.5 84 16.0 85 9.5 86 6.5 87 4.0 88 4.0 89 4.0 90 2.5 91 1.5 92 1.0 93 0.0 94 0.5 95 0.5 96 0.5 97 0.5 98 1.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16071882796895623 2 2.1556462843124995E-4 3 0.009146099234868749 4 0.0060666045429937495 5 0.021618052736962497 6 0.002094056390475 7 0.0 8 0.0 9 3.079494691874999E-5 10-11 0.047608987936387494 12-13 4.0033430994374994E-4 14-15 0.0048656016131625 16-17 1.5397473459374996E-5 18-19 0.0016321321866937495 20-21 2.61757048809375E-4 22-23 0.0 24-25 6.158989383749999E-4 26-27 0.0030333022714968748 28-29 0.005789450020725 30-31 0.017245170274499996 32-33 0.012333376240959372 34-35 0.010516474372753123 36-37 0.004157317834031249 38-39 1.5397473459374996E-5 40-41 0.00372618857716875 42-43 0.009238484075625 44-45 0.007883506411199998 46-47 0.004080330466734374 48-49 0.009469446177515623 50-51 0.0032026744795499995 52-53 0.0021710437577718744 54-55 0.0038801633117624993 56-57 0.008422417982278125 58-59 0.015412870932834374 60-61 0.007698736729687499 62-63 0.02160265526350312 64-65 0.04104966424269375 66-67 0.061482111523284366 68-69 0.05142756135431249 70-71 0.06873432152265 72-73 0.03487527738548437 74-75 0.0280849915899 76-77 0.22406403378082496 78-79 0.08365447330478436 80-81 0.06790285795584373 82-83 0.027684657279956247 84-85 0.052228229974199986 86-87 0.06762570343357499 88-89 0.29372220371103747 90-91 0.2968478908232906 92-93 0.05151994619506875 94-95 0.009053714394112499 96-97 0.014335047790678122 98-99 8.314635668062499E-4 100-101 1.38577261134375E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3247286.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.222925731903054 #Duplication Level Percentage of deduplicated Percentage of total 1 77.921657145186 44.58905199725792 2 11.97806797857332 13.708401886991743 3 3.934626811671818 6.754525734811527 4 1.8643446078960144 4.267330121452302 5 1.0654536575442313 3.048418775821901 6 0.6748325754600586 2.3169536608211874 7 0.46660947903866773 1.8690531695382158 8 0.33317006619611395 1.525197276322676 9 0.25888323029371935 1.333265027429939 >10 1.4054241318265217 14.172828329539849 >50 0.07010613887058403 2.6990371306405936 >100 0.024826235164613204 2.4485635233430796 >500 9.719719201859305E-4 0.38482221370610326 >1k 0.0010259703581565428 0.8825511523229354 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.15898938375E-5 2 0.0 0.0 0.0 0.0 6.15898938375E-5 3 0.0 0.0 0.0 0.0 6.15898938375E-5 4 0.0 0.0 0.0 0.0 6.15898938375E-5 5 0.0 3.079494691875E-5 0.0 0.0 6.15898938375E-5 6 0.0 3.079494691875E-5 0.0 0.0 6.15898938375E-5 7 0.0 3.079494691875E-5 0.0 0.0 6.15898938375E-5 8 0.0 3.079494691875E-5 0.0 0.0 6.15898938375E-5 9 0.0 3.079494691875E-5 0.0 3.079494691875E-5 6.15898938375E-5 10-11 0.0 3.079494691875E-5 0.0 4.6192420378125E-5 6.15898938375E-5 12-13 0.0 3.079494691875E-5 0.0 6.15898938375E-5 9.238484075625E-5 14-15 0.0 3.079494691875E-5 0.0 9.238484075625E-5 9.238484075625E-5 16-17 0.0 3.079494691875E-5 0.0 9.238484075625E-5 1.0778231421562499E-4 18-19 1.5397473459375E-5 3.079494691875E-5 0.0 9.238484075625E-5 1.5397473459375E-4 20-21 3.079494691875E-5 6.15898938375E-5 0.0 9.238484075625E-5 2.1556462843124998E-4 22-23 6.15898938375E-5 6.15898938375E-5 0.0 1.5397473459375E-4 2.3096210189062498E-4 24-25 6.15898938375E-5 6.15898938375E-5 0.0 5.2351409761875E-4 2.61757048809375E-4 26-27 6.15898938375E-5 6.15898938375E-5 0.0 0.0011702079829125 3.0794946918749996E-4 28-29 6.15898938375E-5 6.15898938375E-5 0.0 0.007067440317853124 3.3874441610624997E-4 30-31 6.15898938375E-5 9.238484075625E-5 0.0 0.029332186940109372 3.3874441610624997E-4 32-33 6.15898938375E-5 9.238484075625E-5 0.0 0.07355373071543436 3.69539363025E-4 34-35 6.15898938375E-5 9.238484075625E-5 0.0 0.13474329024299062 3.69539363025E-4 36-37 6.15898938375E-5 9.238484075625E-5 0.0 0.22811356930064058 3.69539363025E-4 38-39 6.15898938375E-5 9.238484075625E-5 0.0 0.37586772461680307 4.0033430994374994E-4 40-41 6.15898938375E-5 9.238484075625E-5 0.0 0.5422990152391874 4.3112925686249995E-4 42-43 6.15898938375E-5 9.238484075625E-5 0.0 0.7152126421879687 4.4652673032187496E-4 44-45 6.15898938375E-5 9.238484075625E-5 0.0 0.9289603687510124 4.7732167724062497E-4 46-47 6.15898938375E-5 9.238484075625E-5 0.0 1.1804165078160653 5.2351409761875E-4 48-49 6.15898938375E-5 9.238484075625E-5 0.0 1.4362763242904997 5.851039914562499E-4 50-51 6.15898938375E-5 9.238484075625E-5 0.0 1.7032069241822247 6.158989383749999E-4 52-53 6.15898938375E-5 9.238484075625E-5 0.0 1.971261539636484 6.312964118343749E-4 54-55 6.15898938375E-5 1.38577261134375E-4 0.0 2.277655864004587 6.466938852937499E-4 56-57 6.15898938375E-5 1.5397473459374998E-4 0.0 2.635231390151653 6.466938852937499E-4 58-59 6.15898938375E-5 1.847696815125E-4 0.0 3.0007828075506744 6.620913587531249E-4 60-61 6.15898938375E-5 1.847696815125E-4 0.0 3.380561490426159 6.774888322124999E-4 62-63 6.15898938375E-5 1.847696815125E-4 0.0 3.7726273571222246 7.0828377913125E-4 64-65 6.15898938375E-5 1.847696815125E-4 0.0 4.1959346974673615 7.3907872605E-4 66-67 6.15898938375E-5 1.847696815125E-4 0.0 4.692826563474853 7.3907872605E-4 68-69 6.15898938375E-5 2.4635957535E-4 0.0 5.220944505657956 7.3907872605E-4 70-71 6.15898938375E-5 2.61757048809375E-4 0.0 5.7714965666713685 8.006686198874999E-4 72-73 6.15898938375E-5 2.7715452226874994E-4 0.0 6.332857654053262 8.468610402656249E-4 74-75 6.15898938375E-5 2.7715452226874994E-4 0.0 6.916314115849358 8.776559871843749E-4 76-77 6.15898938375E-5 2.7715452226874994E-4 0.0 7.5758033015878485 8.930534606437499E-4 78-79 6.15898938375E-5 2.7715452226874994E-4 0.0 8.298699283032047 9.238484075624999E-4 80-81 6.15898938375E-5 2.7715452226874994E-4 0.0 9.029432578467064 9.392458810218748E-4 82-83 6.15898938375E-5 2.7715452226874994E-4 0.0 9.775224602945352 0.00101623324831875 84-85 6.15898938375E-5 2.7715452226874994E-4 0.0 10.553212744427192 0.00101623324831875 86-87 6.15898938375E-5 2.7715452226874994E-4 0.0 11.392482830277345 0.00101623324831875 88-89 6.15898938375E-5 2.7715452226874994E-4 0.0 12.287060640793573 0.00101623324831875 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2245 0.0 46.997784 1 GTATCAA 3805 0.0 39.845272 1 TCAACGC 4680 0.0 31.736801 4 CAACGCA 4800 0.0 30.968664 5 ATCAACG 4970 0.0 30.078234 3 AACGCAG 5210 0.0 28.893982 6 GTACATG 7810 0.0 28.844835 1 TATCAAC 5325 0.0 27.983465 2 TACATGG 8085 0.0 26.765556 2 ACATGGG 8250 0.0 25.655415 3 CATGGGG 6870 0.0 22.586851 4 ACGCAGA 6570 0.0 22.551483 7 CGCAGAG 6785 0.0 21.27696 8 GAGTACA 5695 0.0 19.11096 1 AGAGTAC 6375 0.0 18.436886 10-11 ATGGGGG 3720 0.0 17.617954 5 TATACCG 245 3.7721147E-6 17.445997 5 GTATATA 965 0.0 17.237787 1 GCAGAGT 7845 0.0 17.191666 9 CAGAGTA 7075 0.0 15.773715 10-11 >>END_MODULE