##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921653_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2259806 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.538707747479208 31.0 31.0 34.0 27.0 34.0 2 30.58598702720499 33.0 31.0 34.0 27.0 34.0 3 30.64723166501903 33.0 31.0 34.0 26.0 34.0 4 34.115764362073556 37.0 35.0 37.0 30.0 37.0 5 34.119744349736216 37.0 35.0 37.0 30.0 37.0 6 34.17037303202133 37.0 35.0 37.0 30.0 37.0 7 34.08418466009914 37.0 35.0 37.0 30.0 37.0 8 34.05519987113938 37.0 35.0 37.0 30.0 37.0 9 35.63192238625793 39.0 37.0 39.0 30.0 39.0 10-11 35.537443479661526 39.0 37.0 39.0 30.0 39.0 12-13 35.4335980610725 39.0 37.0 39.0 30.0 39.0 14-15 36.590407981924116 40.0 37.0 41.0 30.0 41.0 16-17 36.53718549291399 40.0 37.0 41.0 29.0 41.0 18-19 36.51412090241375 40.0 37.0 41.0 29.0 41.0 20-21 36.43942134855824 40.0 37.0 41.0 29.0 41.0 22-23 36.3405856520427 40.0 37.0 41.0 28.5 41.0 24-25 36.2269022208101 40.0 36.5 41.0 28.0 41.0 26-27 36.080437878295754 40.0 36.0 41.0 27.0 41.0 28-29 35.94296346677547 40.0 36.0 41.0 27.0 41.0 30-31 35.782617844186625 40.0 36.0 41.0 27.0 41.0 32-33 35.585785239971926 40.0 35.5 41.0 26.0 41.0 34-35 35.399469246475135 39.0 35.0 41.0 25.0 41.0 36-37 35.358437184430876 39.0 35.0 41.0 25.0 41.0 38-39 35.51091244115645 40.0 35.0 41.0 25.5 41.0 40-41 35.55534988401659 40.0 35.0 41.0 25.5 41.0 42-43 35.37092254821874 40.0 35.0 41.0 24.5 41.0 44-45 35.227978419386446 40.0 35.0 41.0 24.0 41.0 46-47 35.048379816674526 40.0 35.0 41.0 23.5 41.0 48-49 34.864954558046136 39.5 35.0 41.0 22.5 41.0 50-51 33.15153269793956 37.0 32.5 39.5 18.5 40.0 52-53 33.2629132766264 37.5 33.0 39.5 19.0 40.0 54-55 34.1729894070553 39.0 34.0 40.5 20.0 41.0 56-57 34.18929058512102 39.0 34.0 41.0 19.5 41.0 58-59 33.9996758571311 38.0 34.0 41.0 18.5 41.0 60-61 33.748624439443034 38.0 34.0 40.5 17.5 41.0 62-63 33.45235741475153 37.0 34.0 40.0 13.5 41.0 64-65 33.15978584002343 37.0 33.5 40.0 12.5 41.0 66-67 32.81730113115905 36.0 33.0 39.5 8.0 41.0 68-69 32.45431289234563 36.0 33.0 39.0 7.0 41.0 70-71 32.04165534563586 35.0 32.5 39.0 2.0 40.5 72-73 31.673185662840083 35.0 32.0 37.5 2.0 40.0 74-75 31.27459348280339 35.0 32.0 37.0 2.0 39.0 76-77 30.889398913004037 35.0 32.0 36.5 2.0 39.0 78-79 30.521784392111535 35.0 31.0 36.0 2.0 39.0 80-81 30.18528935669699 35.0 31.0 36.0 2.0 37.0 82-83 29.851048497083376 35.0 31.0 35.0 2.0 37.0 84-85 29.562790566977874 35.0 31.0 35.0 2.0 36.5 86-87 29.300079520100397 35.0 30.5 35.0 2.0 36.0 88-89 29.038329396417215 35.0 30.0 35.0 2.0 36.0 90-91 28.77948527439966 34.5 30.0 35.0 2.0 35.5 92-93 28.555439050962782 34.0 30.0 35.0 2.0 35.0 94-95 28.290574500642975 34.0 29.5 35.0 2.0 35.0 96-97 28.017279359378637 34.0 29.0 35.0 2.0 35.0 98-99 27.702657440505956 34.0 29.0 35.0 2.0 35.0 100-101 26.591829121614865 33.0 26.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 69007.0 3 12201.0 4 8472.0 5 6399.0 6 5967.0 7 6482.0 8 6843.0 9 7484.0 10 8052.0 11 8703.0 12 8948.0 13 9205.0 14 10046.0 15 11175.0 16 11626.0 17 12235.0 18 11286.0 19 10465.0 20 10477.0 21 10983.0 22 11649.0 23 13096.0 24 15352.0 25 17965.0 26 21129.0 27 24973.0 28 29304.0 29 34813.0 30 40947.0 31 50097.0 32 61735.0 33 79873.0 34 108174.0 35 158747.0 36 264612.0 37 472422.0 38 510022.0 39 98828.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.42596727326983 18.090331229857927 12.255721687756765 25.227979809115475 2 16.443390503013475 19.784561972198976 38.50397885031818 25.268068674469372 3 19.33064101882849 23.150583630019305 29.751979382538924 27.766795968613277 4 13.482637074561833 15.379318590419173 36.334478757981806 34.80356557703719 5 14.082782018509654 36.84024319990932 34.747778172847994 14.329196608733039 6 33.825872372967766 35.20532983062369 16.751756075454598 14.217041720953945 7 28.808736765376903 31.783498096267813 21.01983218477997 18.387932953575312 8 26.486028107101394 34.443392556260896 20.174079380232794 18.896499956404913 9 26.47694785941248 15.234061761503941 19.652646858376922 38.63634352070665 10-11 25.41314806856791 25.01483708416886 28.289373815301428 21.282641031961802 12-13 25.98827170794083 22.787843969189 27.689334371402406 23.534549951467763 14-15 23.045109361965007 24.532641033297203 25.036017943786554 27.38623166095124 16-17 23.23768262330434 27.563786197668495 26.093482416773522 23.105048762253638 18-19 23.173218946420413 26.74666669617064 27.534201561571663 22.545912795837282 20-21 23.574943778500792 26.146659661754818 27.457491412417728 22.820905147326663 22-23 23.505146835371875 26.057128135140644 27.105839971013847 23.331885058473638 24-25 23.29930444551962 26.125213086322148 27.251743091488013 23.32373937667022 26-27 23.121037164867882 26.295222323750867 27.22504665608693 23.35869385529432 28-29 23.238530299234984 26.657268090010366 27.05688093533172 23.047320675422934 30-31 23.448382229999545 26.322878647666514 26.804476621786264 23.424262500547673 32-33 23.178677379932143 26.396750616307063 26.70611562918418 23.71845637457662 34-35 23.790517885919634 26.331611346922028 26.726332496421534 23.1515382707368 36-37 23.72316844949958 26.09566451440464 26.794378954178544 23.38678808191724 38-39 23.39595221284327 26.249281716808014 26.873228354645256 23.481537715703457 40-41 23.651954846076933 26.069577965834306 26.978803039143383 23.29966414894537 42-43 23.535345807345806 26.116878724878724 26.63876923076923 23.709006237006236 44-45 23.35707715748937 26.226044368754277 26.907876607784846 23.509001865971506 46-47 23.60992560936514 26.198388919755043 26.56850194900182 23.623183521877994 48-49 23.271348742973437 26.333248119210495 26.592992295032136 23.80241084278393 50-51 23.360545704745586 26.41188887171935 26.667022866949665 23.56054255658541 52-53 23.685855316763828 26.123456932460332 26.615092324089133 23.575595426686707 54-55 23.06993752897463 26.08551637533697 26.978605719079702 23.865940376608695 56-57 23.17404607232335 26.25146886016451 26.794492605813357 23.77999246169878 58-59 23.165858962851537 25.97396751682519 26.912501906914205 23.947671613409067 60-61 22.982386894057488 26.085335864168652 27.079036124274065 23.853241117499795 62-63 23.15546338285916 26.00174619665686 27.08320862083721 23.75958179964677 64-65 22.946998929566924 25.97695863977843 26.93952806938038 24.136514361274266 66-67 22.8804937158141 26.002200667827086 26.911888372975728 24.20541724338309 68-69 23.15865737197706 25.834908115768012 26.96726610379464 24.039168408460284 70-71 23.005140480379655 25.80149175680999 26.856898505161876 24.336469257648485 72-73 23.027809074829587 25.89369525879595 26.81684374073005 24.26165192564441 74-75 23.03430185034141 26.10371232213734 26.73988426747555 24.122101560045696 76-77 23.14542795906405 25.809048933549583 26.820764680375238 24.22475842701113 78-79 23.064177098992907 25.908222136487204 26.848639252154094 24.1789615123658 80-81 23.242227735978634 26.004179150416817 26.68524806027414 24.068345053330404 82-83 23.215402382656684 25.99445891731129 26.68826952706101 24.101869172971014 84-85 23.200285063838912 25.995023800036677 26.70389171121898 24.100799424905436 86-87 23.2913621996322 26.058556140956295 26.540284570407625 24.10979708900388 88-89 23.127288726420836 25.91093889537051 26.58877780318189 24.37299457502676 90-91 23.168715153181843 25.89427414382726 26.65191105827874 24.285099644712155 92-93 23.40163514519864 25.729674563259753 26.772475484575764 24.096214806965843 94-95 23.34265373224759 25.524616187776466 26.829886012881488 24.302844067094455 96-97 23.4289999254788 25.28854786567731 26.773116654069035 24.509335554774857 98-99 23.297821874665257 25.429086011477775 26.713987679474727 24.55910443438224 100-101 23.561654773192274 25.26448980044469 26.838753319915053 24.33510210644798 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 134.0 1 115.0 2 147.0 3 206.0 4 184.0 5 206.5 6 319.0 7 557.0 8 853.5 9 918.5 10 792.5 11 712.0 12 726.5 13 779.5 14 854.0 15 979.0 16 1063.5 17 1140.0 18 1279.5 19 1404.0 20 1582.0 21 1808.5 22 2007.0 23 2282.5 24 2650.0 25 3159.5 26 4109.0 27 5528.0 28 7432.0 29 10249.0 30 14283.5 31 19483.0 32 27087.5 33 31878.0 34 33881.0 35 38068.5 36 43735.5 37 49668.5 38 54735.0 39 59545.0 40 63983.5 41 68258.0 42 72547.5 43 76831.5 44 80485.5 45 85680.5 46 89561.5 47 91561.5 48 93887.5 49 94587.5 50 94582.5 51 93854.0 52 92390.5 53 90966.5 54 88632.0 55 84016.0 56 77020.0 57 68835.5 58 62002.5 59 54356.5 60 44816.5 61 37053.5 62 31295.5 63 24481.0 64 17433.0 65 12570.5 66 9515.0 67 7555.5 68 5901.5 69 4573.0 70 3623.5 71 2699.5 72 1891.5 73 1445.0 74 1159.0 75 886.0 76 664.0 77 466.0 78 290.0 79 197.0 80 146.0 81 103.5 82 90.5 83 83.0 84 68.0 85 47.0 86 37.5 87 35.5 88 27.0 89 22.0 90 20.5 91 13.5 92 9.5 93 13.0 94 12.5 95 8.0 96 9.0 97 6.5 98 6.5 99 7.5 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.051464594748398755 2 0.07151056329614135 3 0.06752792053831169 4 0.06841295226227384 5 0.062704497642718 6 0.009823852135979813 7 0.013142721100837858 8 0.016682847996686442 9 0.0064607315849236615 10-11 0.011726670342498427 12-13 0.02137351613368581 14-15 0.038166993095867525 16-17 0.025621668408704112 18-19 0.009890229515276974 20-21 0.019426446340969093 22-23 0.035246388406792444 24-25 0.032967431717589916 26-27 0.020112345927039754 28-29 0.010797387032338174 30-31 0.01084163861853628 32-33 0.00785465655016404 34-35 0.004845548688692746 36-37 5.752706205753946E-4 38-39 0.0034294979303533136 40-41 0.0010841638618536281 42-43 0.22650174395501205 44-45 0.19526012409914834 46-47 0.20130046561519 48-49 0.20809308409659943 50-51 0.20003929540854393 52-53 0.20707529761404297 54-55 0.2035794223043925 56-57 0.20603538533838744 58-59 0.21479719940561268 60-61 0.2190896032668291 62-63 0.2043980766490575 64-65 0.2055043663040102 66-67 0.20273864216662849 68-69 0.19771608713314326 70-71 0.18928615996240386 72-73 0.2006809434084165 74-75 0.19999504382234584 76-77 0.19382194754770984 78-79 0.21223060740612246 80-81 0.22309437181775782 82-83 0.22178895002491367 84-85 0.21561585375027767 86-87 0.2354184385739307 88-89 0.22747527885137042 90-91 0.2343564005051761 92-93 0.23032950616114836 94-95 0.2324535822986575 96-97 0.23957808767655275 98-99 0.2334492429881149 100-101 0.23977721981444425 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2259806.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.37983262261686 #Duplication Level Percentage of deduplicated Percentage of total 1 79.14342861807587 49.36953830375598 2 11.95594198707842 14.91619319999338 3 3.85010936583177 7.20507533458066 4 1.7113949654122071 4.270261259744106 5 0.9004597734873561 2.8085264976770383 6 0.5539968301665966 2.073493772355156 7 0.36881019864310416 1.6104422922609642 8 0.26366681290804445 1.3157993325874118 9 0.205463238852694 1.153508620475862 >10 0.9951170992820338 10.54847359515042 >50 0.03508215690288739 1.4721833002632079 >100 0.014109372815112951 1.6889761972600583 >500 0.0014232826728911665 0.6153184469909729 >1k 9.96297871022798E-4 0.9522098469047194 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2370 0.10487625928951422 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.4251586198107274E-5 0.0 3 0.0 0.0 0.0 4.4251586198107274E-5 0.0 4 0.0 0.0 0.0 8.850317239621455E-5 0.0 5 0.0 0.0 0.0 8.850317239621455E-5 4.4251586198107274E-5 6 0.0 0.0 0.0 8.850317239621455E-5 4.4251586198107274E-5 7 0.0 0.0 0.0 8.850317239621455E-5 4.4251586198107274E-5 8 0.0 0.0 0.0 8.850317239621455E-5 8.850317239621455E-5 9 0.0 0.0 0.0 1.327547585943218E-4 8.850317239621455E-5 10-11 0.0 0.0 0.0 1.327547585943218E-4 8.850317239621455E-5 12-13 0.0 0.0 0.0 1.327547585943218E-4 8.850317239621455E-5 14-15 0.0 0.0 0.0 1.327547585943218E-4 1.327547585943218E-4 16-17 0.0 0.0 0.0 1.327547585943218E-4 1.327547585943218E-4 18-19 0.0 0.0 0.0 1.327547585943218E-4 1.327547585943218E-4 20-21 0.0 0.0 0.0 1.327547585943218E-4 1.327547585943218E-4 22-23 0.0 0.0 0.0 2.2125793099053636E-4 1.327547585943218E-4 24-25 0.0 0.0 0.0 6.858995860706627E-4 1.770063447924291E-4 26-27 0.0 0.0 0.0 0.002013447172013881 1.770063447924291E-4 28-29 0.0 0.0 0.0 0.007279385929588647 1.770063447924291E-4 30-31 0.0 0.0 0.0 0.029515807994137548 1.770063447924291E-4 32-33 0.0 0.0 0.0 0.08109103170803159 1.770063447924291E-4 34-35 0.0 0.0 0.0 0.15361938148672938 2.2125793099053636E-4 36-37 0.0 0.0 0.0 0.2665273036712001 2.2125793099053636E-4 38-39 0.0 0.0 0.0 0.4287757444665604 2.2125793099053636E-4 40-41 0.0 0.0 0.0 0.6065564920174564 2.655095171886436E-4 42-43 0.0 0.0 0.0 0.7952895071523839 3.097611033867509E-4 44-45 0.0 0.0 0.0 1.0363500229665732 3.540126895848582E-4 46-47 0.0 0.0 0.0 1.3209983511858983 3.540126895848582E-4 48-49 0.0 0.0 0.0 1.5984115450618326 3.9826427578296543E-4 50-51 0.0 0.0 0.0 1.8827722379708702 4.425158619810727E-4 52-53 0.0 0.0 0.0 2.1705624288102605 4.8676744817918E-4 54-55 0.0 0.0 0.0 2.5112996425356866 5.310190343772872E-4 56-57 0.0 0.0 0.0 2.910338321077119 5.310190343772872E-4 58-59 0.0 0.0 0.0 3.3150633284450084 5.310190343772872E-4 60-61 0.0 0.0 0.0 3.7278199987078535 5.310190343772872E-4 62-63 0.0 0.0 0.0 4.151285552830641 5.752706205753946E-4 64-65 0.0 0.0 0.0 4.620927637151153 5.752706205753946E-4 66-67 0.0 0.0 0.0 5.173497194006919 5.752706205753946E-4 68-69 0.0 0.0 0.0 5.758724421476888 5.752706205753946E-4 70-71 0.0 0.0 0.0 6.343310000946984 6.63773792971609E-4 72-73 0.0 0.0 0.0 6.955774079721888 7.080253791697164E-4 74-75 0.0 0.0 0.0 7.6008737033178955 7.080253791697164E-4 76-77 0.0 0.0 0.0 8.334742008827307 7.080253791697164E-4 78-79 0.0 0.0 0.0 9.116313524258278 7.080253791697164E-4 80-81 0.0 0.0 0.0 9.924081978718528 7.301511722687701E-4 82-83 0.0 0.0 0.0 10.747869507382493 7.965285515659309E-4 84-85 0.0 0.0 0.0 11.625776725966741 7.965285515659309E-4 86-87 0.0 0.0 0.0 12.554064375437537 7.965285515659309E-4 88-89 0.0 0.0 0.0 13.537666507655967 7.965285515659309E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1950 0.0 48.680717 1 GTATCAA 3385 0.0 42.345757 1 TCAACGC 4005 0.0 34.011185 4 CAACGCA 4100 0.0 32.872932 5 ATCAACG 4180 0.0 32.587994 3 TATCAAC 4375 0.0 31.680037 2 AACGCAG 4435 0.0 30.588966 6 GTACATG 4780 0.0 27.008635 1 TACATGG 4930 0.0 25.706635 2 ACGCAGA 5160 0.0 25.468267 7 CGCAGAG 5370 0.0 23.678745 8 ACATGGG 5200 0.0 23.36623 3 CATGGGG 4040 0.0 22.086092 4 GAGTACA 3620 0.0 21.502895 1 CGTATAC 135 3.817732E-4 21.094515 3 GCAGAGT 6020 0.0 19.939865 9 GTATATA 660 0.0 19.416971 1 GTATAGA 565 0.0 19.321507 1 TAAGGTG 1060 0.0 19.251585 5 GGTAAGG 915 0.0 18.67383 3 >>END_MODULE