##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921653_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2259806 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31177145294773 33.0 31.0 34.0 28.0 34.0 2 31.4435363035588 34.0 31.0 34.0 28.0 34.0 3 31.513820655401393 34.0 31.0 34.0 28.0 34.0 4 34.996519170229654 37.0 35.0 37.0 32.0 37.0 5 34.734067437647305 37.0 35.0 37.0 32.0 37.0 6 34.7040064501112 37.0 35.0 37.0 32.0 37.0 7 34.589419180230514 37.0 35.0 37.0 32.0 37.0 8 34.529799903177526 37.0 35.0 37.0 31.0 37.0 9 36.112502577654894 39.0 37.0 39.0 32.0 39.0 10-11 36.00528408190792 39.0 37.0 39.0 31.0 39.0 12-13 35.92532434200104 39.0 37.0 39.0 31.0 39.0 14-15 37.15579213436906 40.0 38.0 41.0 31.0 41.0 16-17 37.1209765351539 40.0 38.0 41.0 31.0 41.0 18-19 37.08644680118559 40.0 38.0 41.0 31.0 41.0 20-21 37.02612348139619 40.0 38.0 41.0 31.0 41.0 22-23 36.92981742680567 40.0 37.0 41.0 30.0 41.0 24-25 36.83787103848738 40.0 37.0 41.0 30.0 41.0 26-27 36.70549529472884 40.0 37.0 41.0 30.0 41.0 28-29 36.576964128779196 40.0 37.0 41.0 30.0 41.0 30-31 36.40237967329939 40.0 36.5 41.0 29.5 41.0 32-33 36.32533788298642 40.0 36.5 41.0 29.5 41.0 34-35 36.42839318950388 40.0 37.0 41.0 30.0 41.0 36-37 36.40602157884349 40.0 37.0 41.0 30.0 41.0 38-39 36.279721577869964 40.0 36.5 41.0 29.0 41.0 40-41 36.17347595324554 40.0 36.0 41.0 28.5 41.0 42-43 36.02229306409488 40.0 36.0 41.0 28.0 41.0 44-45 35.86611483463625 40.0 36.0 41.0 27.0 41.0 46-47 35.68618744263888 40.0 35.0 41.0 26.5 41.0 48-49 35.51893038605969 40.0 35.0 41.0 26.0 41.0 50-51 35.34874121937901 39.5 35.0 41.0 26.0 41.0 52-53 35.160875092817705 39.0 35.0 41.0 25.5 41.0 54-55 34.941544318406095 39.0 35.0 41.0 24.0 41.0 56-57 34.70954011096528 39.0 35.0 41.0 24.0 41.0 58-59 34.46276760040463 38.0 34.5 40.0 23.0 41.0 60-61 34.186602080001556 38.0 34.0 40.0 23.0 41.0 62-63 33.882143422930994 37.0 34.0 40.0 22.0 41.0 64-65 33.54262777424257 37.0 34.0 40.0 22.0 41.0 66-67 33.1890591493252 36.0 33.5 39.0 20.5 41.0 68-69 32.828178392304466 36.0 33.0 39.0 19.5 41.0 70-71 32.43173285671425 35.0 33.0 38.5 18.0 40.0 72-73 32.073711415935705 35.0 33.0 37.5 16.0 40.0 74-75 31.675298012307252 35.0 32.5 37.0 12.0 39.0 76-77 28.97677145737289 33.0 28.0 34.5 7.0 36.5 78-79 30.536004196820436 34.5 31.0 36.0 7.0 37.5 80-81 30.716055050743293 35.0 32.0 35.5 6.5 37.0 82-83 30.54200249932959 35.0 32.0 35.0 2.0 37.0 84-85 30.333078370444188 35.0 32.0 35.0 2.0 36.5 86-87 30.117670720406974 35.0 31.5 35.0 2.0 36.0 88-89 29.84079695336679 35.0 31.0 35.0 2.0 36.0 90-91 29.635337723680706 34.0 31.0 35.0 2.0 35.0 92-93 29.470294352701075 34.0 31.0 35.0 2.0 35.0 94-95 29.358496039040517 34.0 31.0 35.0 2.0 35.0 96-97 29.148395702993973 34.0 31.0 35.0 2.0 35.0 98-99 28.93666292593258 34.0 31.0 35.0 2.0 35.0 100-101 27.81283680988545 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 44686.0 3 15218.0 4 8533.0 5 5999.0 6 5421.0 7 5295.0 8 5541.0 9 5996.0 10 6642.0 11 7272.0 12 7882.0 13 8686.0 14 9425.0 15 10482.0 16 11363.0 17 12349.0 18 11154.0 19 9975.0 20 9527.0 21 9293.0 22 9580.0 23 10615.0 24 12443.0 25 14973.0 26 17745.0 27 21024.0 28 25278.0 29 30525.0 30 36465.0 31 45163.0 32 57294.0 33 74773.0 34 105137.0 35 158254.0 36 277018.0 37 524385.0 38 554353.0 39 74041.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.465164901748636 19.526253478900102 12.762194600330393 26.246387019020865 2 15.554320442976666 21.160871102481057 36.97357690028733 26.31123155425495 3 18.057036896074067 24.20204550383034 29.484596763129595 28.256320836965998 4 13.050393511224717 16.623105463840517 35.21120028889353 35.11530073604124 5 13.808225871988286 37.261858075778726 34.75298570949275 14.17693034274024 6 33.86378742540144 35.73460390961526 16.4523520618543 13.949256603129001 7 28.695427837610836 32.026687246604354 20.920114381500003 18.3577705342848 8 26.495283223427148 34.91799738561629 19.83922513702504 18.74749425393153 9 26.341110697112942 15.262504834485794 19.508444530194186 38.88793993820708 10-11 25.384701375660907 25.29226015032767 28.177307405812773 21.145731068198646 12-13 25.955804033898588 22.913232548558522 27.65606587134519 23.474897546197692 14-15 22.972324417472322 24.724194522324762 24.97821059835611 27.325270461846806 16-17 23.131830785474506 27.834491102333565 26.008648530006557 23.025029582185375 18-19 23.12093695991617 26.94779771362345 27.448289687055333 22.482975639405048 20-21 23.49967331172522 26.279189813078553 27.43515519850323 22.785981676692998 22-23 23.411368055487948 26.132884858257743 27.128788931439246 23.32695815481506 24-25 23.267978570617814 26.287921313199053 27.199287368829335 23.244812747353798 26-27 23.02234235382415 26.51703024767407 27.210847777447356 23.24977962105442 28-29 23.19452084377908 26.746687932111072 27.03679396873289 23.021997255376952 30-31 23.436645949262942 26.43018022503677 26.75758247682072 23.375591348879574 32-33 23.10258679825629 26.54468810161315 26.656878582018546 23.695846518112013 34-35 23.656099329590322 26.518257638503652 26.753986400621177 23.071656631284856 36-37 23.6781070524854 26.196346086274637 26.798081527131313 23.327465334108652 38-39 23.383494729966806 26.39368742132896 26.882490550624823 23.340327298079412 40-41 23.585596174415297 26.237104118052883 26.904417468789454 23.272882238742366 42-43 23.509318598118888 26.296467416438418 26.51400389711372 23.68021008832897 44-45 23.355925227689124 26.30690015312038 26.84976943433968 23.487405184850818 46-47 23.546286503254812 26.326065503400848 26.49949330229718 23.62815469104716 48-49 23.223986703950246 26.49298985647356 26.517883439173474 23.765140000402724 50-51 23.34881290123301 26.492121041547463 26.54484804312684 23.614218014092692 52-53 23.615657125181464 26.268102834655043 26.511623893385305 23.60461614677819 54-55 22.966757769560424 26.255401121202844 26.790733879832686 23.987107229404046 56-57 23.092524591832557 26.37713709137618 26.595490215819538 23.934848100971724 58-59 23.037320502587225 26.17392099071087 26.687426711193364 24.101331795508546 60-61 22.86401688407181 26.306416783702037 26.84714343340291 23.982422898823245 62-63 22.994459033183393 26.23569667953613 26.789837621655405 23.98000666562507 64-65 22.724908351775127 26.124691167284738 26.69633880780501 24.454061673135126 66-67 22.728471261474457 26.20642430030811 26.6188770525502 24.446227385667232 68-69 22.984690833737144 26.004309154973072 26.61867254738886 24.39232746390092 70-71 22.784868421780953 25.97465080930762 26.51409327767095 24.72638749124048 72-73 22.766518876059514 26.059293898502556 26.473250726410903 24.700936499027026 74-75 22.730420445177245 26.22661657546601 26.35666188992846 24.686301089428287 76-77 22.757062683135448 25.94263542958673 26.586948436996526 24.713353450281296 78-79 22.654522593870137 25.980199265128732 26.57213091629939 24.793147224701737 80-81 22.823090505526867 26.022594554502028 26.3938050403237 24.76050989964741 82-83 22.65208043085905 25.99882923547306 26.43816471041283 24.910925623255057 84-85 22.575141556611356 25.96251633175229 26.45850129967764 25.003840811958717 86-87 22.617416587107734 26.011985206466505 26.3705096436055 25.000088562820267 88-89 22.389642563981138 25.873218517498547 26.379866005043173 25.357272913477143 90-91 22.277688822607114 25.79753951107575 26.476099169665435 25.448672496651696 92-93 22.411062214997628 25.65183482917955 26.60446413964842 25.332638816174395 94-95 22.211165604965874 25.448578542402977 26.734745629943944 25.605510222687204 96-97 22.164500171941683 25.184389199849345 26.767403397319832 25.883707230889136 98-99 21.992970137021704 25.349612441521064 26.658429905814174 25.998987515643062 100-101 21.92973799882202 25.25682593894413 26.67128802163378 26.142148040600073 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 147.0 1 111.5 2 114.0 3 171.5 4 172.5 5 175.0 6 286.0 7 519.5 8 779.5 9 842.0 10 672.0 11 541.0 12 537.0 13 565.5 14 601.5 15 678.0 16 724.5 17 759.5 18 875.5 19 1018.0 20 1114.5 21 1251.5 22 1496.0 23 1755.5 24 2166.0 25 2780.0 26 3729.5 27 5179.0 28 7275.0 29 10316.0 30 14425.0 31 19728.5 32 27639.0 33 32361.0 34 33940.5 35 38187.5 36 44029.5 37 49801.0 38 54600.5 39 59178.5 40 63739.5 41 68389.5 42 72657.0 43 76780.5 44 80602.5 45 85944.5 46 89956.5 47 92249.5 48 94552.0 49 95164.5 50 95389.0 51 94691.0 52 93489.5 53 92494.0 54 90229.5 55 85083.5 56 77557.0 57 69115.5 58 61978.5 59 54362.5 60 44937.0 61 37089.0 62 31016.5 63 23985.5 64 16949.0 65 12216.0 66 9154.0 67 7115.0 68 5572.0 69 4283.5 70 3277.5 71 2436.5 72 1737.5 73 1294.5 74 1026.0 75 774.0 76 537.5 77 323.5 78 177.0 79 116.5 80 69.0 81 39.5 82 21.0 83 12.5 84 10.5 85 10.5 86 9.0 87 5.5 88 2.5 89 2.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.5 95 1.0 96 0.0 97 0.0 98 1.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16395212686398744 2 1.327547585943218E-4 3 0.00955834261879117 4 0.00663773792971609 5 0.024072862891770356 6 0.0019470697927167198 7 0.0 8 0.0 9 0.0 10-11 0.04750407778366816 12-13 3.097611033867509E-4 14-15 0.004712793930098424 16-17 0.0 18-19 0.0013054217928441646 20-21 2.876353102876973E-4 22-23 0.0 24-25 5.088932412782337E-4 26-27 0.002743598344282651 28-29 0.005088932412782336 30-31 0.015620809927931868 32-33 0.011328406066715462 34-35 0.009624719998088331 36-37 0.004071145930225869 38-39 2.2125793099053637E-5 40-41 0.0032303657924618308 42-43 0.008186543446649845 44-45 0.0064607315849236615 46-47 0.003363120551056153 48-49 0.008297172412145113 50-51 0.0023453340684996852 52-53 0.001880692413419559 54-55 0.003982642757829654 56-57 0.007235134343390539 58-59 0.014934910341861203 60-61 0.007146631170994324 62-63 0.02004596854774259 64-65 0.03969367281970222 66-67 0.060425540953515475 68-69 0.04984941185216784 70-71 0.06852358122776911 72-73 0.033365695993372885 74-75 0.026263316408576664 76-77 0.22818330423054015 78-79 0.08228582453538047 80-81 0.06719603364182589 82-83 0.0264845743395672 84-85 0.0517301042655874 86-87 0.06735091419351927 88-89 0.2947819414586916 90-91 0.3008444087678323 92-93 0.051442468955299706 94-95 0.009912355308376029 96-97 0.01411625599719622 98-99 7.965285515659309E-4 100-101 3.097611033867509E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2259806.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.01971514901143 #Duplication Level Percentage of deduplicated Percentage of total 1 78.85729105972982 48.90706728947129 2 12.120759373491106 15.034520874672571 3 3.8581800819979355 7.178496890373047 4 1.718618345387438 4.26352880923177 5 0.9339177138182015 2.8960655291810413 6 0.5989601134706047 2.228840137383988 7 0.3704639248697119 1.6083246965383016 8 0.2787880942955607 1.3832286556117128 9 0.1969265160069077 1.099199378523209 >10 1.012403748959396 10.64625571868571 >50 0.03736289741215881 1.5572827289396083 >100 0.014110697254824172 1.7216836147057288 >500 0.0011444817064216338 0.4812916742733352 >1k 0.0010729515997692145 0.9942140024086511 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 4.4251586198107274E-5 7 0.0 0.0 0.0 0.0 4.4251586198107274E-5 8 0.0 0.0 0.0 0.0 4.4251586198107274E-5 9 0.0 0.0 0.0 0.0 8.850317239621455E-5 10-11 0.0 0.0 0.0 4.4251586198107274E-5 8.850317239621455E-5 12-13 0.0 0.0 0.0 4.4251586198107274E-5 2.2125793099053636E-4 14-15 0.0 0.0 0.0 4.4251586198107274E-5 2.655095171886436E-4 16-17 0.0 0.0 0.0 4.4251586198107274E-5 3.9826427578296543E-4 18-19 0.0 0.0 0.0 4.4251586198107274E-5 3.9826427578296543E-4 20-21 0.0 0.0 0.0 4.4251586198107274E-5 4.425158619810727E-4 22-23 0.0 0.0 0.0 1.327547585943218E-4 4.425158619810727E-4 24-25 0.0 0.0 0.0 5.752706205753946E-4 4.425158619810727E-4 26-27 0.0 0.0 0.0 0.001880692413419559 4.425158619810727E-4 28-29 0.0 0.0 0.0 0.007235134343390539 4.425158619810727E-4 30-31 0.0 0.0 0.0 0.029471556407939442 4.425158619810727E-4 32-33 0.0 0.0 0.0 0.08175480550100318 4.425158619810727E-4 34-35 0.0 0.0 0.0 0.15410614893490857 4.8676744817918E-4 36-37 0.0 0.0 0.0 0.26679281318838877 4.8676744817918E-4 38-39 0.0 0.0 0.0 0.4283996059838765 4.8676744817918E-4 40-41 0.0 0.0 0.0 0.6053174476039094 4.8676744817918E-4 42-43 0.0 0.0 0.0 0.7936079468768558 4.8676744817918E-4 44-45 0.0 0.0 0.0 1.0346905884841442 4.8676744817918E-4 46-47 0.0 0.0 0.0 1.31885214925529 4.8676744817918E-4 48-49 0.0 0.0 0.0 1.5955573177520548 4.8676744817918E-4 50-51 0.0 0.0 0.0 1.8786568404544461 4.8676744817918E-4 52-53 0.0 0.0 0.0 2.1656283769491718 4.8676744817918E-4 54-55 0.0 2.2125793099053637E-5 0.0 2.5038653760544047 4.8676744817918E-4 56-57 0.0 4.4251586198107274E-5 0.0 2.902395161354559 4.8676744817918E-4 58-59 0.0 4.4251586198107274E-5 0.0 3.3061245080329904 5.088932412782336E-4 60-61 0.0 4.4251586198107274E-5 0.0 3.7172438696065058 5.310190343772872E-4 62-63 0.0 4.4251586198107274E-5 0.0 4.14006777572942 5.310190343772872E-4 64-65 0.0 4.4251586198107274E-5 0.0 4.609134589429358 5.310190343772872E-4 66-67 0.0 4.4251586198107274E-5 0.0 5.160022586009596 5.310190343772872E-4 68-69 0.0 4.4251586198107274E-5 0.0 5.743678882169531 5.310190343772872E-4 70-71 0.0 4.4251586198107274E-5 0.0 6.327335178329467 5.310190343772872E-4 72-73 0.0 4.4251586198107274E-5 0.0 6.940241772966352 6.416479998725554E-4 74-75 0.0 4.4251586198107274E-5 0.0 7.587133585803383 6.63773792971609E-4 76-77 0.0 4.4251586198107274E-5 0.0 8.323502105932988 6.63773792971609E-4 78-79 0.0 4.4251586198107274E-5 0.0 9.107728716535846 7.080253791697164E-4 80-81 0.0 4.4251586198107274E-5 0.0 9.918948794719547 7.301511722687701E-4 82-83 0.0 4.4251586198107274E-5 0.0 10.746785343520639 7.965285515659309E-4 84-85 0.0 4.4251586198107274E-5 0.0 11.628498198517926 7.965285515659309E-4 86-87 0.0 4.4251586198107274E-5 0.0 12.562361547849683 8.186543446649845E-4 88-89 0.0 4.4251586198107274E-5 0.0 13.553309443376998 8.407801377640382E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1760 0.0 53.481403 1 GTATCAA 3335 0.0 42.336105 1 TCAACGC 4290 0.0 32.303856 4 CAACGCA 4315 0.0 32.03294 5 ATCAACG 4415 0.0 31.281754 3 TATCAAC 4495 0.0 30.619432 2 AACGCAG 4650 0.0 29.824697 6 GTACATG 4920 0.0 24.735756 1 ACGCAGA 5675 0.0 24.354164 7 CGCAGAG 5945 0.0 23.088308 8 TACATGG 5340 0.0 22.396912 2 ACATGGG 5355 0.0 21.62515 3 TAAGGTG 1060 0.0 20.164675 5 GCAGAGT 6545 0.0 20.029253 9 CATGGGG 4315 0.0 18.478098 4 AGAGTAC 5680 0.0 18.313068 10-11 GAGTACT 3540 0.0 18.029371 12-13 GAGTACA 4070 0.0 17.170115 1 CAGAGTA 6360 0.0 16.728472 10-11 TCTATAC 455 9.094947E-12 16.689274 3 >>END_MODULE