##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921652_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3146842 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.456466832462514 31.0 31.0 34.0 26.0 34.0 2 30.50264074268743 31.0 31.0 34.0 26.0 34.0 3 30.565087474998744 33.0 31.0 34.0 26.0 34.0 4 34.029197525646346 37.0 35.0 37.0 30.0 37.0 5 34.02473114315876 37.0 35.0 37.0 30.0 37.0 6 34.07150247772211 37.0 35.0 37.0 30.0 37.0 7 33.9813028426594 37.0 35.0 37.0 30.0 37.0 8 33.954961196018104 37.0 35.0 37.0 30.0 37.0 9 35.52180567057386 39.0 37.0 39.0 30.0 39.0 10-11 35.42171246602149 39.0 36.0 39.0 30.0 39.0 12-13 35.313172062658374 39.0 35.0 39.0 29.0 39.0 14-15 36.46318960405384 40.0 37.0 41.0 29.0 41.0 16-17 36.39911044151565 40.0 37.0 41.0 29.0 41.0 18-19 36.362556175365654 40.0 37.0 41.0 28.0 41.0 20-21 36.2817246623758 40.0 37.0 41.0 27.5 41.0 22-23 36.17979072352536 40.0 36.5 41.0 27.0 41.0 24-25 36.07227515712578 40.0 36.0 41.0 27.0 41.0 26-27 35.91994068974547 40.0 36.0 41.0 27.0 41.0 28-29 35.782886144267806 40.0 36.0 41.0 27.0 41.0 30-31 35.63303448345992 40.0 36.0 41.0 26.0 41.0 32-33 35.45491893142395 39.5 35.0 41.0 25.0 41.0 34-35 35.28017707911614 39.0 35.0 41.0 25.0 41.0 36-37 35.24767846622105 39.0 35.0 41.0 25.0 41.0 38-39 35.42909653551084 40.0 35.0 41.0 25.0 41.0 40-41 35.48811904124834 40.0 35.0 41.0 25.0 41.0 42-43 35.32311155119958 40.0 35.0 41.0 24.0 41.0 44-45 35.20130213083466 40.0 35.0 41.0 24.0 41.0 46-47 35.04207202013956 40.0 35.0 41.0 23.5 41.0 48-49 34.87294389105014 39.0 35.0 41.0 23.0 41.0 50-51 33.15241121098549 37.0 32.5 39.5 18.5 40.0 52-53 33.26944679777377 37.5 33.0 39.5 19.0 40.0 54-55 34.18456503377037 39.0 34.0 40.5 21.0 41.0 56-57 34.200417752146436 39.0 34.0 41.0 20.0 41.0 58-59 34.00537491237247 38.0 34.0 41.0 19.5 41.0 60-61 33.75078062387625 38.0 34.0 40.0 18.5 41.0 62-63 33.44891688238558 37.0 34.0 40.0 17.5 41.0 64-65 33.15352264270021 37.0 33.0 40.0 14.0 41.0 66-67 32.808230600710175 36.0 33.0 39.0 12.5 41.0 68-69 32.439176164548456 36.0 33.0 39.0 8.0 41.0 70-71 32.02285783652309 35.0 32.0 38.5 7.0 40.5 72-73 31.6519528149173 35.0 32.0 37.5 2.0 40.0 74-75 31.247345116151365 35.0 32.0 37.0 2.0 39.0 76-77 30.86313342074372 35.0 32.0 36.5 2.0 39.0 78-79 30.502983149455865 35.0 31.0 36.0 2.0 38.0 80-81 30.173567023701857 35.0 31.0 35.5 2.0 37.0 82-83 29.846716168145715 35.0 31.0 35.0 2.0 37.0 84-85 29.568890017357084 35.0 31.0 35.0 2.0 36.0 86-87 29.31140632418151 35.0 30.5 35.0 2.0 36.0 88-89 29.061441597639792 35.0 30.0 35.0 2.0 36.0 90-91 28.813355421085646 34.0 30.0 35.0 2.0 35.0 92-93 28.59129787895293 34.0 30.0 35.0 2.0 35.0 94-95 28.329453146996258 34.0 29.5 35.0 2.0 35.0 96-97 28.050230199037635 34.0 29.0 35.0 2.0 35.0 98-99 27.734018104499686 34.0 29.0 35.0 2.0 35.0 100-101 26.61532641295623 33.0 26.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 101541.0 3 17908.0 4 12673.0 5 9595.0 6 8937.0 7 8953.0 8 9654.0 9 10372.0 10 11326.0 11 12057.0 12 12030.0 13 12191.0 14 12862.0 15 13707.0 16 13689.0 17 14135.0 18 13906.0 19 13385.0 20 13780.0 21 14582.0 22 15737.0 23 18011.0 24 21173.0 25 25163.0 26 29933.0 27 35098.0 28 41356.0 29 48985.0 30 58524.0 31 71567.0 32 88302.0 33 113029.0 34 156707.0 35 225663.0 36 377688.0 37 672756.0 38 694709.0 39 115150.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.8551039128064 17.493629150590507 11.942127410629263 25.70913952597383 2 16.692277114372487 19.49681194447536 38.11639185257032 25.69451908858183 3 19.56781808329581 22.815621971044138 29.106214749631754 28.510345196028297 4 13.695133003672904 14.946687230693401 35.59327747126071 35.76490229437298 5 14.576539695935473 36.5317526463586 34.265275965699495 14.626431692006436 6 34.708778901550396 34.25447093700263 16.60752241189063 14.42922774955634 7 29.587184246322828 31.13849302704008 20.67158439379108 18.602738332846013 8 27.02016100709368 34.10936137793951 19.891613093514614 18.9788645214522 9 26.919967381100236 15.00866638149494 18.99682264458429 39.07454359282054 10-11 25.92321210610128 24.605296800692464 27.87034516557011 21.601145927636146 12-13 26.348207547034875 22.12089730637403 27.443911994646154 24.086983151944942 14-15 23.546345562001513 23.870428952318463 24.50392463729968 28.079300848380345 16-17 23.974712167981185 26.824472452327846 25.43954756789454 23.761267811796433 18-19 23.938547885517785 26.289418610748715 26.584252736757968 23.18778076697553 20-21 24.362499129911313 25.597166895882722 26.493827058470913 23.546506915735048 22-23 24.291150481440855 25.354851927869465 26.208585111136156 24.145412479553528 24-25 24.053191895173853 25.41350634818709 26.307815549720576 24.225486206918475 26-27 23.86872817707813 25.661491489189594 26.286546217831674 24.183234115900603 28-29 24.025672309862728 25.925908858183195 26.086086680991567 23.962332150962514 30-31 24.25016351574423 25.66934987157102 25.90806061110712 24.172426001577634 32-33 23.99508037688508 25.758072448442082 25.85087154079068 24.395975633882156 34-35 24.373357689228126 25.685092962516105 25.922295987998744 24.01925336025702 36-37 24.40527574622662 25.518607620942507 25.951807470123367 24.124309162707505 38-39 24.156079156935604 25.646635487021207 26.054219786945797 24.143065569097384 40-41 24.351508499260994 25.45246715475993 26.124863869775133 24.071160476203946 42-43 24.24368467266545 25.430775438785346 25.87687798918487 24.448661899364335 44-45 24.030987266196167 25.535075112058365 26.085815152570675 24.348122469174797 46-47 24.198763669432182 25.460981142360783 25.94213369233238 24.39812149587465 48-49 23.96080105351667 25.573795444728187 25.989912874069827 24.475490627685318 50-51 24.00960126140337 25.66122900858395 26.061324021398264 24.267845708614423 52-53 24.228383808502706 25.426547475487908 26.033892616487957 24.31117609952143 54-55 23.741136967730483 25.343237268558138 26.303465767022953 24.61215999668843 56-57 23.802604809992037 25.474227818499497 26.224270567544927 24.498896803963547 58-59 23.899085059485227 25.29699620989383 26.209452766500448 24.5944659641205 60-61 23.815681593047486 25.331360749823766 26.34176044320391 24.511197213924834 62-63 23.876118897785975 25.314943994212346 26.327082588356742 24.481854519644934 64-65 23.721463629919892 25.214824806254864 26.211460337414895 24.85225122641035 66-67 23.669164533810363 25.330133677392404 26.141250597825984 24.859451190971253 68-69 23.76502525541979 25.238051117071542 26.230660436232295 24.766263191276373 70-71 23.66975722134068 25.117766242763377 26.211903464155 25.000573071740938 72-73 23.69505283470831 25.30801075528168 26.089295457089122 24.907640952920886 74-75 23.715991234277702 25.417617573474217 26.10959381718868 24.756797375059403 76-77 23.781607987722953 25.16290331824173 26.14492393706102 24.910564756974292 78-79 23.733204341315936 25.268752830192287 26.199587548236668 24.798455280255112 80-81 23.89349669297056 25.35172668578085 26.046573102190273 24.708203519058316 82-83 23.852061269684608 25.378580324380724 26.052084423129685 24.717273982804986 84-85 23.868238974733448 25.35164440942831 26.050960474845148 24.7291561409931 86-87 23.889731541657483 25.440110002815686 26.0083272921394 24.661831163387436 88-89 23.744812301706546 25.244162809285232 26.070579609680294 24.94044527932792 90-91 23.835144598922746 25.19906031523172 26.113964568641467 24.851830517204064 92-93 23.98590941447948 25.102868599875467 26.176766140552317 24.73445584509274 94-95 23.96747401405665 24.973435954213013 26.194824661372117 24.86426537035822 96-97 24.042650581915932 24.818634051215994 26.15756468413577 24.981150682732306 98-99 23.928128866446478 24.837323581746222 26.08813917351987 25.146408378287433 100-101 24.148619434089497 24.77093560204638 26.205667896519113 24.874777067345015 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 57.0 1 52.5 2 98.0 3 157.0 4 146.5 5 167.0 6 251.5 7 423.5 8 645.0 9 728.5 10 645.5 11 573.5 12 611.5 13 694.5 14 795.5 15 915.0 16 1076.0 17 1163.5 18 1231.0 19 1353.0 20 1471.5 21 1654.0 22 1835.0 23 1969.5 24 2190.0 25 2487.0 26 2941.0 27 3640.5 28 4724.0 29 6467.0 30 9075.0 31 13032.5 32 19131.5 33 24772.0 34 29947.5 35 36944.0 36 45759.5 37 55326.0 38 64802.5 39 74025.5 40 82609.0 41 90703.0 42 99095.5 43 107884.5 44 116416.0 45 125103.5 46 130700.0 47 135622.5 48 141135.5 49 143276.0 50 143096.5 51 142217.5 52 140912.0 53 139730.5 54 136018.0 55 127757.5 56 117447.5 57 105788.5 58 95686.0 59 84285.0 60 69632.0 61 57630.5 62 48190.0 63 37596.5 64 27369.5 65 20254.5 66 15531.0 67 12157.5 68 9402.5 69 7350.5 70 5682.5 71 4173.0 72 3050.5 73 2311.5 74 1809.0 75 1416.5 76 1066.5 77 749.5 78 485.5 79 313.5 80 231.0 81 177.5 82 130.5 83 113.5 84 96.5 85 78.5 86 64.0 87 51.0 88 43.5 89 42.5 90 38.0 91 29.5 92 30.0 93 24.0 94 16.0 95 13.0 96 11.5 97 12.5 98 12.0 99 8.0 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05265596429690464 2 0.07283492466415536 3 0.06972069141062691 4 0.06965713562994266 5 0.06511289731101848 6 0.009469811321953882 7 0.012774711917535103 8 0.016556280868248233 9 0.006355578068425425 10-11 0.012568155630311278 12-13 0.02200618906192303 14-15 0.03816524630089467 16-17 0.02615320375157062 18-19 0.010391370141875569 20-21 0.019416290999039673 22-23 0.03586134925109046 24-25 0.033748119543339006 26-27 0.02025840509310604 28-29 0.010772704825981095 30-31 0.011312928961797256 32-33 0.008246362543781988 34-35 0.005418130303332674 36-37 8.421140940663688E-4 38-39 0.004162903634818653 40-41 0.0012393377233429577 42-43 0.22184145247838943 44-45 0.19282823859602738 46-47 0.1988660377610315 48-49 0.20663573194968163 50-51 0.19743603269563584 52-53 0.2050627263777463 54-55 0.20145593582391488 56-57 0.20404583388679826 58-59 0.21267353111468576 60-61 0.21601020960060913 62-63 0.20220271624695488 64-65 0.20261582882140253 66-67 0.20007359759403237 68-69 0.19479846779723928 70-71 0.1866633278696547 72-73 0.19846881413175493 74-75 0.19700703117601712 76-77 0.19136645564028953 78-79 0.2096069646966705 80-81 0.22052267002919115 82-83 0.21991889011269075 84-85 0.21299131001810703 86-87 0.2315337090327382 88-89 0.22506690834811538 90-91 0.23129537485517226 92-93 0.22743436117860383 94-95 0.2307074838838429 96-97 0.23741261874603176 98-99 0.2304055939255927 100-101 0.23645928203576794 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3146842.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.7666088269346 #Duplication Level Percentage of deduplicated Percentage of total 1 79.64590084598993 48.398113013770896 2 11.193302514124895 13.603580707147422 3 3.6166928624773393 6.593224812639805 4 1.6967910488888842 4.1243295171549965 5 0.9338350860769685 2.8372995692252974 6 0.6350764855169608 2.315486662235613 7 0.42697615628231045 1.8162125147064678 8 0.3005484318122638 1.4610647191587571 9 0.23847260683151142 1.3042054453742846 >10 1.2472396330796574 13.231793170560449 >50 0.050724517092169026 2.0540335773577043 >100 0.012971318734871323 1.3830266700218277 >500 9.964774559893589E-4 0.43400247588889584 >1k 4.7201563630832423E-4 0.44362714475764936 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.177789034212712E-5 2 0.0 0.0 0.0 0.0 3.177789034212712E-5 3 0.0 0.0 0.0 0.0 3.177789034212712E-5 4 0.0 0.0 0.0 0.0 3.177789034212712E-5 5 0.0 0.0 0.0 0.0 3.177789034212712E-5 6 0.0 0.0 0.0 0.0 6.355578068425425E-5 7 0.0 0.0 0.0 0.0 6.355578068425425E-5 8 0.0 0.0 0.0 0.0 9.533367102638137E-5 9 0.0 0.0 0.0 0.0 1.9066734205276274E-4 10-11 0.0 0.0 0.0 0.0 1.9066734205276274E-4 12-13 0.0 0.0 0.0 0.0 3.0188995825020765E-4 14-15 0.0 0.0 0.0 0.0 4.607794099608433E-4 16-17 0.0 0.0 0.0 0.0 5.402241358161611E-4 18-19 0.0 0.0 0.0 4.7666835513190684E-5 5.720020261582883E-4 20-21 0.0 0.0 0.0 9.533367102638137E-5 5.720020261582883E-4 22-23 0.0 0.0 0.0 1.5888945171063561E-4 6.673356971846696E-4 24-25 0.0 0.0 0.0 3.495567937633983E-4 7.944472585531781E-4 26-27 0.0 3.177789034212712E-5 0.0 9.215588199216866E-4 8.580030392374323E-4 28-29 0.0 3.177789034212712E-5 0.0 0.005831242877780326 8.897809295795594E-4 30-31 0.0 3.177789034212712E-5 0.0 0.027789765104190168 9.056698747506231E-4 32-33 0.0 3.177789034212712E-5 0.0 0.0783166107481723 9.215588199216866E-4 34-35 0.0 3.177789034212712E-5 0.0 0.14916541726594473 9.533367102638137E-4 36-37 0.0 3.177789034212712E-5 0.0 0.2627078194583649 9.533367102638137E-4 38-39 0.0 4.7666835513190684E-5 0.0 0.43689832536873474 0.0010327814361191315 40-41 0.0 6.355578068425425E-5 0.0 0.6278675573797476 0.001048670381290195 42-43 0.0 6.355578068425425E-5 0.0 0.8292281595326362 0.0010645593264612587 44-45 0.0 6.355578068425425E-5 0.0 1.0760470338199375 0.0010963372168033858 46-47 0.0 6.355578068425425E-5 0.0 1.368880293322639 0.0011916708878297673 48-49 0.0 6.355578068425425E-5 0.0 1.6541345259787432 0.0013346713943693392 50-51 0.0 6.355578068425425E-5 0.0 1.9507493544321577 0.0013982271750535935 52-53 0.0 6.355578068425425E-5 0.0 2.2541328735284454 0.0014776719009089111 54-55 0.0 6.355578068425425E-5 0.0 2.6078366819814915 0.0016365613526195468 56-57 0.0 6.355578068425425E-5 0.0 3.013020672788783 0.0016842281881327375 58-59 0.0 6.355578068425425E-5 0.0 3.4237340165156054 0.001700117133303801 60-61 0.0 6.355578068425425E-5 0.0 3.843710615277157 0.0017477839688169918 62-63 0.0 9.533367102638137E-5 0.0 4.280100494400418 0.0018431176398433732 64-65 0.0 9.533367102638137E-5 0.0 4.760312084305472 0.0018748955301855002 66-67 0.0 9.533367102638137E-5 0.0 5.315185827569353 0.0019066734205276275 68-69 0.0 9.533367102638137E-5 0.0 5.898802672647689 0.001954340256040818 70-71 0.0 9.533367102638137E-5 0.0 6.489919099846767 0.002049673927067199 72-73 0.0 9.533367102638137E-5 0.0 7.100960264290358 0.0022721191594620893 74-75 0.0 9.533367102638137E-5 0.0 7.74457376633463 0.002288008104633153 76-77 0.0 9.533367102638137E-5 0.0 8.479707592564228 0.0023038970498042164 78-79 0.0 9.533367102638137E-5 0.0 9.260681025612344 0.00231978599497528 80-81 0.0 9.533367102638137E-5 0.0 10.057162069147418 0.002335674940146344 82-83 0.0 9.533367102638137E-5 0.0 10.869706836250437 0.002383341775659534 84-85 0.0 1.1122261619744493E-4 0.0 11.72859965641745 0.002383341775659534 86-87 3.177789034212712E-5 1.271115613685085E-4 0.0 12.65379704478331 0.0024786754466859153 88-89 3.177789034212712E-5 1.271115613685085E-4 0.0 13.630156836599994 0.00254223122737017 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3660 0.0 42.14215 1 GGTATCA 2115 0.0 41.73659 1 TCAACGC 4425 0.0 34.75152 4 CAACGCA 4445 0.0 34.380516 5 ATCAACG 4690 0.0 32.68519 3 TATCAAC 4670 0.0 32.31704 2 AACGCAG 4815 0.0 31.722967 6 GTACATG 7080 0.0 28.354471 1 ACGCAGA 5810 0.0 25.88485 7 TACATGG 7665 0.0 25.633595 2 ACATGGG 7980 0.0 24.502796 3 CGCAGAG 6145 0.0 24.166052 8 CATGGGG 6775 0.0 22.627432 4 GAGTACA 5365 0.0 19.991858 1 GCAGAGT 7170 0.0 19.389791 9 TATACCG 150 7.7689614E-4 18.984022 5 ATGGGGG 4000 0.0 18.153471 5 AGAGTAC 5845 0.0 18.103058 10-11 AGTACAT 5735 0.0 17.212788 2 TAAGGCG 995 0.0 17.171476 5 >>END_MODULE