##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921652_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3146842 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34226281459317 33.0 31.0 34.0 28.0 34.0 2 31.46858151759764 34.0 31.0 34.0 28.0 34.0 3 31.545860262447242 34.0 31.0 34.0 28.0 34.0 4 35.019728667661106 37.0 35.0 37.0 32.0 37.0 5 34.751905243415464 37.0 35.0 37.0 32.0 37.0 6 34.72093514704583 37.0 35.0 37.0 32.0 37.0 7 34.59759307902971 37.0 35.0 37.0 32.0 37.0 8 34.54267866006619 37.0 35.0 37.0 32.0 37.0 9 36.1290055236329 39.0 37.0 39.0 32.0 39.0 10-11 36.02103982341662 39.0 37.0 39.0 31.0 39.0 12-13 35.940673062073024 39.0 37.0 39.0 31.0 39.0 14-15 37.174926640740146 40.0 38.0 41.0 31.0 41.0 16-17 37.13885047295034 40.0 38.0 41.0 31.0 41.0 18-19 37.09151460416507 40.0 38.0 41.0 31.0 41.0 20-21 37.02587864277901 40.0 38.0 41.0 31.0 41.0 22-23 36.934911253885645 40.0 37.0 41.0 30.0 41.0 24-25 36.8428365644033 40.0 37.0 41.0 30.0 41.0 26-27 36.713214231918855 40.0 37.0 41.0 30.0 41.0 28-29 36.58798900612106 40.0 37.0 41.0 30.0 41.0 30-31 36.43001237431049 40.0 37.0 41.0 30.0 41.0 32-33 36.377062464527924 40.0 36.5 41.0 29.5 41.0 34-35 36.5020341027608 40.0 37.0 41.0 30.0 41.0 36-37 36.49044200503235 40.0 37.0 41.0 30.0 41.0 38-39 36.380011293862225 40.0 37.0 41.0 29.5 41.0 40-41 36.29039160529827 40.0 36.5 41.0 29.0 41.0 42-43 36.16316484907726 40.0 36.0 41.0 28.5 41.0 44-45 36.026365638948505 40.0 36.0 41.0 28.0 41.0 46-47 35.86984983675698 40.0 35.5 41.0 27.5 41.0 48-49 35.71922200097748 40.0 35.0 41.0 27.0 41.0 50-51 35.555038511625305 39.5 35.0 41.0 27.0 41.0 52-53 35.36625607513819 39.0 35.0 41.0 26.0 41.0 54-55 35.14530408581047 39.0 35.0 41.0 26.0 41.0 56-57 34.913570017179126 39.0 35.0 41.0 26.0 41.0 58-59 34.66065693797147 38.0 34.5 40.0 25.5 41.0 60-61 34.37676836015281 38.0 34.0 40.0 25.0 41.0 62-63 34.06758299272731 37.0 34.0 40.0 23.5 41.0 64-65 33.722204991543904 37.0 34.0 40.0 23.0 41.0 66-67 33.36789247760135 36.0 34.0 39.0 22.0 41.0 68-69 33.00574178811647 36.0 33.0 39.0 22.0 40.5 70-71 32.606247628574934 35.0 33.0 38.5 21.0 40.0 72-73 32.246185064264424 35.0 33.0 37.0 20.0 39.5 74-75 31.84936008862218 35.0 32.5 37.0 19.0 39.0 76-77 29.152122032183378 33.0 28.5 34.5 11.5 36.5 78-79 30.72312083034356 34.5 31.5 35.5 12.5 37.0 80-81 30.909926999830304 35.0 32.0 35.0 15.0 37.0 82-83 30.742053461851597 35.0 32.0 35.0 11.5 37.0 84-85 30.5515875916236 35.0 32.0 35.0 8.5 36.0 86-87 30.35053793612771 35.0 32.0 35.0 7.0 36.0 88-89 30.08920625821061 35.0 31.0 35.0 2.0 35.5 90-91 29.897294811750953 34.0 31.0 35.0 2.0 35.0 92-93 29.74262975389295 34.0 31.0 35.0 2.0 35.0 94-95 29.635604361451893 34.0 31.0 35.0 2.0 35.0 96-97 29.431659581256383 34.0 31.0 35.0 2.0 35.0 98-99 29.224252758797547 34.0 31.0 35.0 2.0 35.0 100-101 28.09568720005644 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 61085.0 3 21592.0 4 11768.0 5 8330.0 6 7126.0 7 7394.0 8 7752.0 9 8220.0 10 8984.0 11 9746.0 12 10306.0 13 10915.0 14 11785.0 15 12384.0 16 13122.0 17 13851.0 18 13407.0 19 12326.0 20 11983.0 21 11792.0 22 12472.0 23 13874.0 24 16610.0 25 19845.0 26 23677.0 27 28992.0 28 34674.0 29 41592.0 30 50953.0 31 62726.0 32 79885.0 33 104758.0 34 149106.0 35 224512.0 36 396734.0 37 754650.0 38 770398.0 39 87514.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.05629757325095 18.800414038871526 12.39621177349833 26.747076614379196 2 15.837167340676578 20.758424806106955 36.59679970815149 26.807608145064982 3 18.320112861587237 23.829075333965356 28.79397452859661 29.056837275850793 4 13.345941483015864 16.01008312988894 34.552675518854706 36.0912998682405 5 14.395601880694404 36.88729946422078 34.207799440063674 14.509299215021143 6 34.861774531989695 34.75528468951903 16.265775257811242 14.117165520680036 7 29.508567637015144 31.245642456786836 20.649559145327284 18.59623076087074 8 26.990169827401566 34.52632829992736 19.636289333878217 18.84721253879286 9 26.798462330953488 14.98299405657928 18.851889879406045 39.366653733061185 10-11 25.910341458622415 24.824689314636284 27.765813887795122 21.49915533894618 12-13 26.345401562842607 22.264564657131146 27.36951154018488 24.020522239841362 14-15 23.481875428028456 24.051202928787188 24.39963199483903 28.06728964834533 16-17 23.944878706970353 27.015751029126978 25.325516819719578 23.71385344418309 18-19 23.899635788622025 26.420133602432184 26.538698531428285 23.141532077517503 20-21 24.34975183017106 25.725816113132012 26.379599578878725 23.544832477818204 22-23 24.28429835371461 25.467373322206832 26.110748490073544 24.137579834005013 24-25 24.04030100228167 25.584161153164146 26.187230283270097 24.188307561284088 26-27 23.84798296021057 25.815487554232497 26.232806679266957 24.103722806289976 28-29 24.054406034564124 26.113104221506333 25.951886325652524 23.88060341827702 30-31 24.239869079337755 25.82500008740334 25.804500032259774 24.130630800999132 32-33 23.990390559127967 25.889507320699355 25.715551524254494 24.40455059591818 34-35 24.31110000896223 25.85265139019456 25.871767637956385 23.96448096288683 36-37 24.361369815606146 25.661407902938794 25.91646750397359 24.06075477748147 38-39 24.156586850656446 25.844994099639273 25.94128112267491 24.057137927029373 40-41 24.33195386007549 25.630252968754096 26.005483465785538 24.032309705384872 42-43 24.201482029522047 25.5776023588909 25.791422928537756 24.4294926830493 44-45 24.04357031911048 25.699147105441924 25.951003253472955 24.306279321974646 46-47 24.145290623353947 25.649488238177597 25.83690516576348 24.368315972704977 48-49 23.893009247209104 25.719346552167423 25.906963485012735 24.480680715610738 50-51 23.986760362950754 25.76206088605974 25.946742732134574 24.30443601885493 52-53 24.204288011877566 25.559231631897184 25.87909900078588 24.357381355439365 54-55 23.665235863282273 25.52897194123272 26.102966997032144 24.702825198452864 56-57 23.733827281572264 25.5972244490395 25.992347022684832 24.676601246703406 58-59 23.74390351846699 25.50190544099108 26.00780355992727 24.746387480614654 60-61 23.707008946241988 25.51627877266096 26.140200535271322 24.636511745825732 62-63 23.73678010912191 25.54084189020045 26.060563103623856 24.661814897053784 64-65 23.510381626316768 25.423273783514556 25.942406758329295 25.12393783183938 66-67 23.521064264891027 25.544064853284087 25.827832152334185 25.107038729490704 68-69 23.543983330196404 25.457313195952853 25.88129123576301 25.117412238087727 70-71 23.427854774186297 25.248702489195164 25.881880448229705 25.441562288388837 72-73 23.37630157174046 25.367186596020357 25.8121432558589 25.444368576380278 74-75 23.322984352563576 25.445206159802353 25.7793084486303 25.452501039003767 76-77 23.35100612958437 25.138939581267156 25.933451045812962 25.576603243335516 78-79 23.195419721569095 25.165881480016143 25.995360438996357 25.643338359418404 80-81 23.266205296556006 25.23699169050469 25.857342004479726 25.639461008459584 82-83 23.150984613159594 25.245924827540723 25.896235973404597 25.70685458589509 84-85 23.092778293628708 25.169710187157712 25.87449450185571 25.863017017357866 86-87 23.048140186058507 25.245380137488876 25.805215559135053 25.901264117317567 88-89 22.88040832489429 25.030790890453908 25.888776722421458 26.200024062230348 90-91 22.722906265776633 24.90659915755978 25.983919947780944 26.38657462888265 92-93 22.784004405403298 24.759822696506788 26.094908525723966 26.36126437236595 94-95 22.60519588698276 24.662943960942577 26.158710827887017 26.573149324187646 96-97 22.58312880047737 24.49846213010276 26.14312082310007 26.7752882463198 98-99 22.37406711230244 24.533425066297195 26.117598269996805 26.974909551403563 100-101 22.251140194328773 24.433970418503435 26.205784102869174 27.109105284298625 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 63.0 1 56.5 2 78.5 3 115.0 4 112.0 5 128.5 6 206.5 7 418.5 8 626.0 9 620.5 10 502.0 11 440.0 12 436.0 13 437.0 14 453.0 15 495.0 16 560.0 17 646.5 18 730.5 19 800.0 20 917.5 21 1045.0 22 1191.0 23 1427.0 24 1716.5 25 2059.0 26 2559.0 27 3314.5 28 4459.0 29 6279.0 30 9199.5 31 13176.5 32 19430.5 33 24970.0 34 29802.5 35 36560.5 36 44826.5 37 54326.0 38 63573.5 39 72580.5 40 81367.0 41 90008.0 42 98516.0 43 106778.0 44 115201.0 45 124101.5 46 130364.0 47 135579.0 48 141182.5 49 143801.5 50 144040.5 51 143520.5 52 143212.0 53 142807.0 54 139561.0 55 131505.5 56 120401.5 57 108191.5 58 97610.5 59 85742.0 60 70781.0 61 58121.0 62 48101.5 63 37212.5 64 26740.0 65 19644.5 66 15028.0 67 11705.0 68 9024.0 69 6946.0 70 5251.0 71 3860.5 72 2783.0 73 2059.5 74 1567.5 75 1168.5 76 805.0 77 496.5 78 293.0 79 165.5 80 107.5 81 62.0 82 37.0 83 23.5 84 15.5 85 11.5 86 9.0 87 6.5 88 5.5 89 5.5 90 3.0 91 1.5 92 1.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16232146386758536 2 1.271115613685085E-4 3 0.010582037483928332 4 0.006355578068425425 5 0.024468975563437884 6 0.002002007091554009 7 0.0 8 0.0 9 3.177789034212712E-5 10-11 0.04758739078733537 12-13 3.813346841055255E-4 14-15 0.004671349880292687 16-17 0.0 18-19 0.0013664492847114663 20-21 1.5888945171063561E-4 22-23 0.0 24-25 6.991135875267966E-4 26-27 0.0028441211856203774 28-29 0.005370463467819484 30-31 0.016174946184142707 32-33 0.011217595290770875 34-35 0.009660478664006645 36-37 0.004019903128279081 38-39 1.588894517106356E-5 40-41 0.0034796789924629195 42-43 0.008850142460282404 44-45 0.006498578574964997 46-47 0.003638568444173556 48-49 0.00861180828271645 50-51 0.002510453337028043 52-53 0.0021926744336067715 54-55 0.00397223629276589 56-57 0.007102358491465412 58-59 0.014538384831523157 60-61 0.006784579588044141 62-63 0.02021073825759285 64-65 0.03853069203982914 66-67 0.05832831772297433 68-69 0.04811172597798046 70-71 0.06579612195337421 72-73 0.03273122705239094 74-75 0.025406423328530634 76-77 0.22206389771078436 78-79 0.08195517919234585 80-81 0.06374644802630701 82-83 0.025724202231951904 84-85 0.04936695264649448 86-87 0.06605034507611122 88-89 0.29059291823358147 90-91 0.29521660127836097 92-93 0.05127362606702211 94-95 0.009390366596098564 96-97 0.014125272257075506 98-99 8.580030392374323E-4 100-101 3.1777890342127123E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3146842.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.18807252959629 #Duplication Level Percentage of deduplicated Percentage of total 1 79.07639114491818 47.59455565609061 2 11.48731615076418 13.827988353051948 3 3.7773902436778015 6.820615138772068 4 1.7272335211478946 4.1583542578559785 5 0.9955400603204737 2.995981867834367 6 0.6076602929673235 2.1944341071883797 7 0.4308839366242269 1.8153851540563857 8 0.32306092865405933 1.5555531684247403 9 0.2289129623231946 1.2400046981345862 >10 1.2768897038516696 13.392418503800457 >50 0.054236980507638276 2.1602033591203873 >100 0.01284199836744328 1.3300418997580925 >500 0.001112373981415309 0.4588738278307054 >1k 5.297018944940762E-4 0.4555900080812497 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.355578068425425E-5 2 0.0 0.0 0.0 0.0 6.355578068425425E-5 3 0.0 0.0 0.0 0.0 6.355578068425425E-5 4 0.0 0.0 0.0 0.0 6.355578068425425E-5 5 0.0 0.0 0.0 0.0 6.355578068425425E-5 6 0.0 0.0 0.0 0.0 1.5888945171063561E-4 7 0.0 0.0 0.0 0.0 1.9066734205276274E-4 8 0.0 0.0 0.0 0.0 2.2244523239488986E-4 9 0.0 0.0 0.0 0.0 3.495567937633984E-4 10-11 0.0 0.0 0.0 0.0 3.495567937633984E-4 12-13 0.0 1.588894517106356E-5 0.0 0.0 4.7666835513190687E-4 14-15 0.0 3.177789034212712E-5 0.0 0.0 6.037799165004153E-4 16-17 0.0 3.177789034212712E-5 0.0 0.0 6.991135875267968E-4 18-19 0.0 3.177789034212712E-5 0.0 3.177789034212712E-5 7.785583133821145E-4 20-21 0.0 3.177789034212712E-5 0.0 3.177789034212712E-5 9.056698747506231E-4 22-23 0.0 3.177789034212712E-5 0.0 9.533367102638137E-5 0.0010327814361191315 24-25 0.0 3.177789034212712E-5 0.0 2.8600101307914413E-4 0.0012075598330008306 26-27 0.0 3.177789034212712E-5 0.0 8.738919844084959E-4 0.0012075598330008306 28-29 0.0 3.177789034212712E-5 0.0 0.005990132329490963 0.0012075598330008306 30-31 0.0 3.177789034212712E-5 0.0 0.028123432952782506 0.0012234487781718944 32-33 0.0 3.177789034212712E-5 0.0 0.07922228062292291 0.001271115613685085 34-35 0.0 3.177789034212712E-5 0.0 0.15070664494753788 0.0013346713943693392 36-37 0.0 3.177789034212712E-5 0.0 0.2649004938919717 0.0013346713943693392 38-39 0.0 3.177789034212712E-5 0.0 0.4382647746534462 0.0013346713943693392 40-41 0.0 3.177789034212712E-5 0.0 0.6292975624451435 0.0013664492847114663 42-43 0.0 3.177789034212712E-5 0.0 0.8308170540497426 0.0013664492847114663 44-45 0.0 3.177789034212712E-5 0.0 1.07712748209157 0.0014617829557378478 46-47 0.0 3.177789034212712E-5 0.0 1.369388739568113 0.001557116626764229 48-49 0.0 3.177789034212712E-5 0.0 1.6545476385531908 0.0016206724074484832 50-51 0.0 3.177789034212712E-5 0.0 1.9519886921555007 0.0016206724074484832 52-53 0.0 3.177789034212712E-5 0.0 2.2554357670324725 0.0017160060784748646 54-55 0.0 3.177789034212712E-5 0.0 2.6091395754855187 0.001811339749501246 56-57 0.0 3.177789034212712E-5 0.0 3.0138310089925073 0.001811339749501246 58-59 0.0 3.177789034212712E-5 0.0 3.424655575335527 0.0018431176398433732 60-61 0.0 6.355578068425425E-5 0.0 3.844663951987421 0.0019066734205276275 62-63 0.0 6.355578068425425E-5 0.0 4.280481829084524 0.0019702292012118818 64-65 0.0 6.355578068425425E-5 0.0 4.760931753167144 0.002002007091554009 66-67 0.0 6.355578068425425E-5 0.0 5.315614829088972 0.002033784981896136 68-69 0.0 6.355578068425425E-5 0.0 5.898198892731189 0.002065562872238263 70-71 0.0 6.355578068425425E-5 0.0 6.488886318410648 0.002065562872238263 72-73 0.0 6.355578068425425E-5 0.0 7.101341598974464 0.0021450075980935807 74-75 0.0 6.355578068425425E-5 0.0 7.747481443300934 0.002176785488435708 76-77 1.588894517106356E-5 6.355578068425425E-5 0.0 8.483759273582848 0.0021926744336067715 78-79 3.177789034212712E-5 6.355578068425425E-5 0.0 9.270055503263272 0.0021926744336067715 80-81 3.177789034212712E-5 6.355578068425425E-5 0.0 10.070445227310428 0.002208563378777835 82-83 3.177789034212712E-5 6.355578068425425E-5 0.0 10.885103224121199 0.002351563885317407 84-85 3.177789034212712E-5 6.355578068425425E-5 0.0 11.749016950962266 0.0024151196660016612 86-87 3.177789034212712E-5 6.355578068425425E-5 0.0 12.680140915876933 0.0024310086111727245 88-89 3.177789034212712E-5 6.355578068425425E-5 0.0 13.66266561841999 0.0024468975563437883 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2055 0.0 43.721916 1 GTATCAA 3655 0.0 40.190212 1 TCAACGC 4455 0.0 32.601604 4 CAACGCA 4615 0.0 31.700193 5 ATCAACG 4690 0.0 31.272156 3 TATCAAC 4825 0.0 30.495556 2 AACGCAG 4965 0.0 29.463196 6 GTACATG 7235 0.0 28.845308 1 TACATGG 7720 0.0 26.49916 2 ACATGGG 8025 0.0 25.255444 3 ACGCAGA 5885 0.0 24.372606 7 CGCAGAG 6240 0.0 22.60546 8 CATGGGG 6635 0.0 22.176144 4 GAGTACA 5440 0.0 19.050518 1 ATGGGGG 3790 0.0 18.423029 5 CCCTATA 425 3.6379788E-12 17.869123 2 AGAGTAC 5915 0.0 17.704975 10-11 GCAGAGT 7305 0.0 17.489346 9 GTATAGT 700 0.0 16.978182 1 GTATAAA 1065 0.0 16.515863 1 >>END_MODULE