##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921651_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3161211 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.47314589250765 31.0 31.0 34.0 26.0 34.0 2 30.523698038504865 31.0 31.0 34.0 26.0 34.0 3 30.586877307462235 33.0 31.0 34.0 26.0 34.0 4 34.05527470327036 37.0 35.0 37.0 30.0 37.0 5 34.05188739378675 37.0 35.0 37.0 30.0 37.0 6 34.100234688541825 37.0 35.0 37.0 30.0 37.0 7 34.01291783433627 37.0 35.0 37.0 30.0 37.0 8 33.98205371296 37.0 35.0 37.0 30.0 37.0 9 35.546072691762745 39.0 37.0 39.0 30.0 39.0 10-11 35.44793767325243 39.0 36.0 39.0 30.0 39.0 12-13 35.3432540567523 39.0 35.0 39.0 29.0 39.0 14-15 36.49402507456794 40.0 37.0 41.0 29.0 41.0 16-17 36.43377253210873 40.0 37.0 41.0 29.0 41.0 18-19 36.400892411167746 40.0 37.0 41.0 29.0 41.0 20-21 36.32441855352268 40.0 37.0 41.0 28.0 41.0 22-23 36.22535398617808 40.0 36.5 41.0 27.5 41.0 24-25 36.116159914665616 40.0 36.0 41.0 27.0 41.0 26-27 35.968473157913216 40.0 36.0 41.0 27.0 41.0 28-29 35.82866597642486 40.0 36.0 41.0 27.0 41.0 30-31 35.681175663377104 40.0 36.0 41.0 26.5 41.0 32-33 35.50913241792465 39.5 35.5 41.0 25.5 41.0 34-35 35.332036994683364 39.0 35.0 41.0 25.0 41.0 36-37 35.29542159634393 39.0 35.0 41.0 25.0 41.0 38-39 35.467592482754235 40.0 35.0 41.0 25.5 41.0 40-41 35.53015094531811 40.0 35.0 41.0 25.0 41.0 42-43 35.36622879649603 40.0 35.0 41.0 24.5 41.0 44-45 35.239754638333224 40.0 35.0 41.0 24.0 41.0 46-47 35.08311435079784 40.0 35.0 41.0 23.5 41.0 48-49 34.91752938984459 39.0 35.0 41.0 23.0 41.0 50-51 33.20224069193736 37.0 32.5 39.5 19.0 40.0 52-53 33.32114591528373 37.5 33.0 39.5 19.5 40.0 54-55 34.23064167497836 39.0 34.0 40.5 21.0 41.0 56-57 34.2488546319749 39.0 34.0 41.0 21.0 41.0 58-59 34.05633537274165 38.0 34.0 41.0 20.0 41.0 60-61 33.799684677802276 38.0 34.0 40.0 19.0 41.0 62-63 33.50314120126749 37.0 34.0 40.0 18.0 41.0 64-65 33.212294434000135 37.0 33.0 40.0 16.0 41.0 66-67 32.866583565601914 36.0 33.0 39.0 13.0 41.0 68-69 32.503442351681045 36.0 33.0 39.0 10.0 41.0 70-71 32.092974179831714 35.0 32.5 39.0 7.5 40.5 72-73 31.725713974802694 35.0 32.0 37.5 4.0 40.0 74-75 31.32615428074874 35.0 32.0 37.0 2.0 39.0 76-77 30.948005526995825 35.0 32.0 36.5 2.0 39.0 78-79 30.596765448430997 35.0 31.0 36.0 2.0 38.5 80-81 30.27467211141553 35.0 31.0 36.0 2.0 37.0 82-83 29.953085858552306 35.0 31.0 35.0 2.0 37.0 84-85 29.683249710316712 35.0 31.0 35.0 2.0 36.0 86-87 29.43349431594411 35.0 31.0 35.0 2.0 36.0 88-89 29.191255819367957 35.0 30.5 35.0 2.0 36.0 90-91 28.9479612401703 34.0 30.0 35.0 2.0 35.5 92-93 28.7392760242831 34.0 30.0 35.0 2.0 35.0 94-95 28.484133612087266 34.0 30.0 35.0 2.0 35.0 96-97 28.223051071250858 34.0 29.0 35.0 2.0 35.0 98-99 27.924998521136363 34.0 29.0 35.0 2.0 35.0 100-101 26.818139788834088 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 99845.0 3 17609.0 4 12134.0 5 9449.0 6 8684.0 7 9018.0 8 9558.0 9 10349.0 10 11262.0 11 12057.0 12 12186.0 13 12248.0 14 12908.0 15 13770.0 16 13869.0 17 14162.0 18 14004.0 19 13452.0 20 13529.0 21 14241.0 22 15656.0 23 17859.0 24 20839.0 25 24799.0 26 29489.0 27 35168.0 28 41071.0 29 49173.0 30 58238.0 31 70602.0 32 87579.0 33 113096.0 34 155913.0 35 226850.0 36 377436.0 37 674777.0 38 705479.0 39 122846.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.894600396829034 17.69905622546523 12.285811858472115 25.120531519233612 2 16.265412283734175 19.47668197606466 38.56049871408654 25.697407026114615 3 19.21167108686142 23.386301806972238 29.260560192416175 28.141466913750175 4 13.5242841165825 15.37306596171762 36.07389555995428 35.0287543617456 5 14.404721582977484 36.87582895182504 34.308365330741886 14.41108413445559 6 34.107314881749886 34.906363249532966 16.81797977465172 14.168342094065428 7 29.32468820166687 31.39569795654676 20.917388351028876 18.362225490757496 8 26.663083016758254 34.35418842510609 20.066846988167946 18.915881569967706 9 26.784015569751478 15.30470885646667 19.35348960661512 38.55778596716673 10-11 25.693056017595538 24.800197038630866 28.054925309292596 21.451821634481 12-13 26.20589725197588 22.44823506742153 27.54818953649261 23.797678144109977 14-15 23.430133388186523 24.130492571084986 24.68632415069859 27.753049890029907 16-17 23.703545961725972 27.082405493203822 25.682208710672565 23.531839834397644 18-19 23.71372519988155 26.476744392053835 26.826125828568827 22.983404579495783 20-21 24.15681952867258 25.829432920653694 26.675168316530947 23.338579234142777 22-23 24.08339394752586 25.600887464563048 26.4303775917413 23.885340996169795 24-25 23.877320629124167 25.756006718125885 26.426553527055646 23.940119125694302 26-27 23.706672480002684 25.924831413782854 26.422830337387587 23.94566576882687 28-29 23.84995297149595 26.11102270307756 26.290246702705506 23.748777622720986 30-31 24.10037067637167 25.8272831286965 26.079304464140662 23.993041730791166 32-33 23.78424191115966 25.95660959167384 25.984449508356562 24.274698988809934 34-35 24.21279639459404 25.94669270880292 26.035951561373487 23.80455933522955 36-37 24.353893704151904 25.688171197744897 26.041693522353075 23.91624157575012 38-39 23.98156327776956 25.864826368815113 26.11148237984931 24.042127973566018 40-41 24.21797941901258 25.68988697222864 26.202956500283126 23.88917710847566 42-43 24.089210926900662 25.663701381858445 26.00511550469714 24.241972186543755 44-45 23.940825772840675 25.720128803345414 26.19190481307254 24.147140610741367 46-47 24.198925693226787 25.676981112697288 25.996822821165534 24.127270372910388 48-49 23.863623935379287 25.809958159353947 26.026428857983525 24.299989047283244 50-51 23.874082983686236 25.876854379069385 26.105733029007094 24.143329608237284 52-53 24.152966973328038 25.689401621994662 26.10011504160233 24.057516363074974 54-55 23.67565626190215 25.585152102696085 26.339488152091445 24.39970348331032 56-57 23.701406255795206 25.767344724931977 26.261758027380793 24.26949099189202 58-59 23.810000863906236 25.463279625841416 26.324094820446202 24.402624689806142 60-61 23.66793536758773 25.525855659774678 26.456884512284628 24.349324460352964 62-63 23.73559678576399 25.524735219240785 26.459071873342694 24.280596121652536 64-65 23.57269882932489 25.492314373658704 26.325053334981725 24.609933462034686 66-67 23.561330840097646 25.531268098174483 26.257937045059244 24.649464016668627 68-69 23.713659190172752 25.4873731346406 26.298148135821336 24.500819539365306 70-71 23.595184931040112 25.353119319703527 26.308035098784664 24.743660650471696 72-73 23.65257455495258 25.44991314601613 26.227620834812598 24.669891464218693 74-75 23.658659280565143 25.67705754553287 26.152039113033855 24.512244060868138 76-77 23.68031853658784 25.385000862143286 26.30326270520278 24.63141789606609 78-79 23.652682556298586 25.437729960796894 26.2724682358476 24.637119247056912 80-81 23.828349667244776 25.54204700742239 26.104100546295623 24.525502779037215 82-83 23.7700950956624 25.54750114496211 26.198936631796517 24.48346712757898 84-85 23.77921619253298 25.54613720435071 26.15449216991457 24.520154433201743 86-87 23.754356881208714 25.650234396403892 26.150435434445107 24.444973287942283 88-89 23.720149423507014 25.412919334103712 26.170246598249857 24.696684644139417 90-91 23.65184016397601 25.461610612779168 26.236447372426458 24.650101850818356 92-93 23.89363133706599 25.306742435916707 26.31048840980333 24.489137817213976 94-95 23.82628123589447 25.201022867386662 26.31747922706892 24.655216669649953 96-97 23.904868500184957 25.029273535883213 26.3113949487949 24.754463015136935 98-99 23.765482158012386 25.06162263939749 26.24651180267564 24.92638339991448 100-101 23.994097279148214 24.929276119159237 26.353948883464867 24.722677718227686 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 74.0 1 67.0 2 104.0 3 161.0 4 142.0 5 146.0 6 235.0 7 416.5 8 677.5 9 784.0 10 684.0 11 599.5 12 644.0 13 711.0 14 763.5 15 876.5 16 1035.5 17 1151.5 18 1247.5 19 1364.0 20 1471.5 21 1612.5 22 1744.0 23 1918.0 24 2165.5 25 2477.5 26 2980.0 27 3849.5 28 5222.5 29 7277.5 30 10679.0 31 15815.5 32 23536.0 33 30565.0 34 36549.5 35 44385.5 36 54309.5 37 64499.0 38 72869.5 39 81136.0 40 88481.0 41 94365.0 42 100825.0 43 108705.0 44 115642.0 45 123015.0 46 128619.0 47 131938.5 48 136439.0 49 138482.5 50 137754.0 51 136962.5 52 135418.5 53 133567.5 54 131086.0 55 124381.5 56 114394.0 57 103312.0 58 94062.0 59 83329.5 60 69101.0 61 57345.5 62 47919.5 63 37154.5 64 26851.5 65 19774.0 66 15119.5 67 11890.5 68 9148.0 69 7119.0 70 5600.5 71 4155.0 72 3029.0 73 2305.0 74 1845.5 75 1429.5 76 1037.5 77 705.0 78 467.0 79 321.5 80 245.0 81 184.0 82 125.5 83 106.0 84 91.5 85 72.0 86 67.0 87 55.5 88 41.5 89 35.5 90 32.0 91 26.5 92 23.0 93 20.5 94 17.0 95 13.5 96 10.5 97 10.5 98 10.5 99 7.5 100 5.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05263805547937167 2 0.0748763685815341 3 0.07038441913557811 4 0.06997318432714551 5 0.06646187173206723 6 0.010312503657617286 7 0.013728915912288045 8 0.017714730209403926 9 0.006643023828526473 10-11 0.012953896465626622 12-13 0.022839348591410066 14-15 0.03988977641796135 16-17 0.027505281994779848 18-19 0.010723738466049878 20-21 0.020498473528024544 22-23 0.03788105254600215 24-25 0.03490750854656649 26-27 0.020941341783259643 28-29 0.011451307742507539 30-31 0.011625291699921329 32-33 0.008920631998306979 34-35 0.0056940204244512625 36-37 7.750194466614219E-4 38-39 0.004064897914122152 40-41 0.0012969713189027875 42-43 0.22997515825422596 44-45 0.20004991757905433 46-47 0.20642405710975953 48-49 0.21328851506590354 50-51 0.20506381889725173 52-53 0.21194409357679697 54-55 0.20822716357750243 56-57 0.21080528949190672 58-59 0.2193305034051824 60-61 0.22352193510651458 62-63 0.20941341783259643 64-65 0.20944505127939894 66-67 0.2069460089820009 68-69 0.20213772506801983 70-71 0.19347016064413292 72-73 0.20533270319507305 74-75 0.2042571660037878 76-77 0.19875294626015158 78-79 0.21729014608642067 80-81 0.22905778829695328 82-83 0.2270174309781916 84-85 0.22039022387306634 86-87 0.23974989331620064 88-89 0.23271145140264285 90-91 0.23974989331620064 92-93 0.23487834250861456 94-95 0.23812077080587157 96-97 0.24564953114486823 98-99 0.23853200561430415 100-101 0.24515921271942936 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3161211.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.84584102613516 #Duplication Level Percentage of deduplicated Percentage of total 1 78.91073542684632 46.435685921836104 2 11.678830652221619 13.745012238635754 3 3.7433670840537907 6.608447529920894 4 1.7567574851210532 4.1351148676362595 5 0.9546481488545401 2.8088536601694236 6 0.6048086572406133 2.1354284457126833 7 0.4081204807641816 1.6811335051391219 8 0.316008845095365 1.4876645009067535 9 0.22990600767998828 1.2176111141000998 >10 1.303054864209882 13.644372587727757 >50 0.06854209574728112 2.7351443523090273 >100 0.023172685873842497 2.2064418690100065 >500 0.0014009664110564278 0.5768653699384096 >1k 6.465998805045961E-4 0.5822240369577054 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.326689360501403E-5 2 0.0 0.0 0.0 0.0 6.326689360501403E-5 3 0.0 0.0 0.0 0.0 6.326689360501403E-5 4 0.0 0.0 0.0 0.0 6.326689360501403E-5 5 0.0 0.0 0.0 0.0 6.326689360501403E-5 6 0.0 0.0 0.0 0.0 1.5816723401253506E-4 7 0.0 0.0 0.0 0.0 1.5816723401253506E-4 8 0.0 0.0 0.0 0.0 1.5816723401253506E-4 9 0.0 0.0 0.0 0.0 1.8980068081504207E-4 10-11 0.0 0.0 0.0 1.5816723401253507E-5 1.8980068081504207E-4 12-13 0.0 0.0 0.0 3.1633446802507014E-5 2.6888429782130966E-4 14-15 0.0 0.0 0.0 3.1633446802507014E-5 3.321511914263236E-4 16-17 0.0 0.0 0.0 3.1633446802507014E-5 5.061351488401122E-4 18-19 0.0 0.0 0.0 3.1633446802507014E-5 5.377685956426192E-4 20-21 0.0 0.0 0.0 6.326689360501403E-5 5.377685956426192E-4 22-23 0.0 0.0 0.0 3.163344680250701E-4 6.484856594513937E-4 24-25 0.0 0.0 0.0 5.852187658463798E-4 7.275692764576613E-4 26-27 0.0 0.0 0.0 0.001091353914686492 7.433859998589148E-4 28-29 0.0 0.0 0.0 0.004270515318338447 7.592027232601683E-4 30-31 0.0 0.0 0.0 0.019359669443134293 7.592027232601683E-4 32-33 0.0 0.0 0.0 0.057509606286957754 7.908361700626754E-4 34-35 0.0 0.0 0.0 0.11108084844700339 8.224696168651823E-4 36-37 0.0 0.0 0.0 0.1975508752816563 8.541030636676893E-4 38-39 0.0 0.0 0.0 0.3380666459783924 8.541030636676893E-4 40-41 0.0 0.0 0.0 0.49496854211882724 8.541030636676893E-4 42-43 0.0 0.0 0.0 0.6585292788111897 8.699197870689428E-4 44-45 0.0 0.0 0.0 0.8631660461766076 8.857365104701964E-4 46-47 0.0 0.0 0.0 1.1007964985570404 9.64820127476464E-4 48-49 1.5816723401253507E-5 0.0 0.0 1.3372406966823789 0.0011388040848902526 50-51 3.1633446802507014E-5 0.0 0.0 1.5871291096987832 0.0011388040848902526 52-53 3.1633446802507014E-5 0.0 0.0 1.8397538158636042 0.001249521148699027 54-55 3.1633446802507014E-5 0.0 0.0 2.141094030104286 0.0013602382125078017 56-57 3.1633446802507014E-5 0.0 0.0 2.4876226231023493 0.0013918716593103086 58-59 3.1633446802507014E-5 0.0 0.0 2.842059577801039 0.0013918716593103086 60-61 3.1633446802507014E-5 0.0 0.0 3.214954648708992 0.0014235051061128156 62-63 3.1633446802507014E-5 0.0 0.0 3.5819500817882766 0.0014235051061128156 64-65 3.1633446802507014E-5 0.0 0.0 3.987949554775053 0.0014867719997178296 66-67 3.1633446802507014E-5 0.0 0.0 4.469220814428395 0.0014867719997178296 68-69 3.1633446802507014E-5 0.0 0.0 4.976463133906595 0.0015342221699215903 70-71 3.1633446802507014E-5 1.5816723401253507E-5 0.0 5.495156761127302 0.0016449392337303647 72-73 3.1633446802507014E-5 3.1633446802507014E-5 0.0 6.036357585747993 0.0018505566379466603 74-75 3.1633446802507014E-5 3.1633446802507014E-5 0.0 6.604858074959248 0.0019138235315516745 76-77 3.1633446802507014E-5 3.1633446802507014E-5 0.0 7.2433475652210495 0.001929640254952928 78-79 3.1633446802507014E-5 3.1633446802507014E-5 0.0 7.940849250492928 0.001929640254952928 80-81 3.1633446802507014E-5 3.1633446802507014E-5 0.0 8.651099214826218 0.001992907148557942 82-83 3.1633446802507014E-5 3.1633446802507014E-5 0.0 9.38703553796314 0.002151074382570477 84-85 3.1633446802507014E-5 3.1633446802507014E-5 0.0 10.154858375476993 0.002151074382570477 86-87 3.1633446802507014E-5 6.326689360501403E-5 0.0 10.977929027831422 0.002245974722977998 88-89 3.1633446802507014E-5 7.908361700626753E-5 0.0 11.855140324388344 0.0023566917867867726 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2160 0.0 54.268387 1 GTATCAA 4180 0.0 43.029537 1 TCAACGC 4820 0.0 35.939915 4 CAACGCA 4945 0.0 35.22115 5 ATCAACG 5140 0.0 33.79475 3 TATCAAC 5305 0.0 32.833103 2 AACGCAG 5415 0.0 32.232853 6 GTACATG 8010 0.0 28.616621 1 ACGCAGA 6255 0.0 27.228676 7 TACATGG 8500 0.0 26.186962 2 CGCAGAG 6735 0.0 24.725754 8 ACATGGG 8875 0.0 24.49223 3 CATGGGG 7070 0.0 22.622559 4 GCAGAGT 7905 0.0 20.046171 9 CAGAGTA 7060 0.0 18.245775 10-11 GAGTACA 6060 0.0 18.090189 1 TAATACT 2310 0.0 18.080147 4 AGAGTAC 6350 0.0 17.894888 10-11 ATGGGGG 4105 0.0 17.225698 5 TTAATAC 2260 0.0 16.800135 3 >>END_MODULE