##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921650_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3332077 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.276737902515457 33.0 31.0 34.0 28.0 34.0 2 31.40452846677913 34.0 31.0 34.0 28.0 34.0 3 31.482613396989326 34.0 31.0 34.0 28.0 34.0 4 34.95899194406372 37.0 35.0 37.0 32.0 37.0 5 34.68684697262398 37.0 35.0 37.0 32.0 37.0 6 34.65566642067395 37.0 35.0 37.0 32.0 37.0 7 34.53609355366037 37.0 35.0 37.0 31.0 37.0 8 34.47806218163626 37.0 35.0 37.0 31.0 37.0 9 36.05933926496897 39.0 37.0 39.0 31.0 39.0 10-11 35.952748991094744 39.0 37.0 39.0 31.0 39.0 12-13 35.86715358018437 39.0 37.0 39.0 30.0 39.0 14-15 37.09352710036413 40.0 38.0 41.0 31.0 41.0 16-17 37.0521272467593 40.0 38.0 41.0 31.0 41.0 18-19 37.006179479045656 40.0 38.0 41.0 31.0 41.0 20-21 36.942329063824154 40.0 37.5 41.0 30.0 41.0 22-23 36.849319358466204 40.0 37.0 41.0 30.0 41.0 24-25 36.75699541157062 40.0 37.0 41.0 30.0 41.0 26-27 36.624194308835 40.0 37.0 41.0 30.0 41.0 28-29 36.49958239260377 40.0 37.0 41.0 30.0 41.0 30-31 36.33896740681563 40.0 36.5 41.0 29.5 41.0 32-33 36.281958520166256 40.0 36.5 41.0 29.5 41.0 34-35 36.4074157049792 40.0 37.0 41.0 30.0 41.0 36-37 36.39484126567304 40.0 37.0 41.0 30.0 41.0 38-39 36.285457839059546 40.0 37.0 41.0 29.0 41.0 40-41 36.19695733321889 40.0 36.0 41.0 28.5 41.0 42-43 36.065585219069064 40.0 36.0 41.0 28.0 41.0 44-45 35.92771025399473 40.0 36.0 41.0 28.0 41.0 46-47 35.765058100398036 40.0 35.0 41.0 27.0 41.0 48-49 35.61679201891193 40.0 35.0 41.0 27.0 41.0 50-51 35.44753497593243 39.0 35.0 41.0 26.0 41.0 52-53 35.26195523092653 39.0 35.0 41.0 26.0 41.0 54-55 35.03824881597875 39.0 35.0 41.0 26.0 41.0 56-57 34.80557997309186 39.0 35.0 41.0 25.0 41.0 58-59 34.55242015715723 38.0 34.5 40.0 24.5 41.0 60-61 34.263165437053225 38.0 34.0 40.0 23.5 41.0 62-63 33.953032898099295 37.0 34.0 40.0 23.0 41.0 64-65 33.61095736983269 37.0 34.0 40.0 22.0 41.0 66-67 33.2549399368622 36.0 33.5 39.0 22.0 41.0 68-69 32.89092538977941 35.5 33.0 39.0 21.0 40.5 70-71 32.49276202200609 35.0 33.0 38.5 20.0 40.0 72-73 32.13508346295718 35.0 33.0 37.0 19.5 39.5 74-75 31.737078104737677 35.0 32.5 37.0 17.5 39.0 76-77 29.044817691788033 33.0 28.5 34.5 9.5 36.5 78-79 30.614659415133563 34.5 31.0 35.5 11.0 37.0 80-81 30.799233481099026 35.0 32.0 35.0 10.5 37.0 82-83 30.6322553470403 35.0 32.0 35.0 7.5 37.0 84-85 30.44168201995332 35.0 32.0 35.0 7.0 36.0 86-87 30.240560317183547 35.0 32.0 35.0 2.0 36.0 88-89 29.973152781283268 35.0 31.0 35.0 2.0 35.5 90-91 29.775560108604935 34.0 31.0 35.0 2.0 35.0 92-93 29.615974510793116 34.0 31.0 35.0 2.0 35.0 94-95 29.5051756006839 34.0 31.0 35.0 2.0 35.0 96-97 29.298152923836994 34.0 31.0 35.0 2.0 35.0 98-99 29.08781339686928 34.0 31.0 35.0 2.0 35.0 100-101 27.940519231698428 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 69730.0 3 22931.0 4 12869.0 5 9079.0 6 7919.0 7 7645.0 8 8329.0 9 8883.0 10 9700.0 11 10351.0 12 10965.0 13 11613.0 14 12370.0 15 13405.0 16 14322.0 17 14849.0 18 14374.0 19 13277.0 20 13079.0 21 12917.0 22 13717.0 23 15043.0 24 18029.0 25 21555.0 26 25472.0 27 30383.0 28 37017.0 29 44675.0 30 54465.0 31 67273.0 32 85193.0 33 112296.0 34 159798.0 35 239611.0 36 420844.0 37 793753.0 38 799602.0 39 94742.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.97273195946017 18.984670557520356 12.453056494534218 26.589540988485254 2 15.777859275380933 20.844412538999805 36.67104032690809 26.706687858711163 3 18.29515545832209 24.03959025478963 28.910544645137705 28.754709641750576 4 13.292099281065251 16.059700937070247 34.672259515215764 35.975940266648735 5 14.26875369043041 37.13286690195365 34.1894081232546 14.408971284361341 6 34.61342690687504 34.875942228021884 16.37715051278573 14.13348035231735 7 29.349591861172474 31.474872879588318 20.710625834877167 18.46490942436204 8 26.997545374851782 34.58248413827171 19.685409430814474 18.73456105606203 9 26.954989335480544 14.930087149846777 18.874713879661247 39.24020963501144 10-11 25.971058930172152 24.860949162242065 27.77485781902651 21.393134088559272 12-13 26.31221969325919 22.35558800791341 27.441384679285875 23.89080761954152 14-15 23.46923692532373 24.08820650387008 24.453462632602303 27.989093938203887 16-17 23.87888995362352 27.109832695943105 25.410397178696652 23.600880171736726 18-19 23.909207505187176 26.50871522056245 26.570959828968384 23.011117445281993 20-21 24.283204692097602 25.765946428804554 26.464235975799433 23.486612903298415 22-23 24.257992837500453 25.507678844156363 26.208247888629227 24.026080429713957 24-25 24.037875736707747 25.681456543021213 26.19375316246375 24.086914557807287 26-27 23.792243908229192 25.906155644348416 26.296584802794857 24.005015644627534 28-29 23.923181680053723 26.129873832774962 26.09721966903144 23.849724818139865 30-31 24.19572313028778 25.8490014413919 25.868377086371254 24.086898341949066 32-33 23.93523919121175 25.91936099419046 25.79400364771419 24.3513961668836 34-35 24.26759995431809 25.949816829642337 25.903639680772883 23.878943535266693 36-37 24.29875772221862 25.760471964714892 26.0040084707306 23.936761842335883 38-39 24.14582918489416 25.852392644646667 25.970787285345942 24.030990885113233 40-41 24.299624155264723 25.702641777619846 26.022183332878146 23.975550734237284 42-43 24.15396016157236 25.70102630503176 25.77243005044184 24.372583482954045 44-45 23.941450053454236 25.691663600276364 26.027876038996077 24.339010307273316 46-47 24.069684750529607 25.667893726448654 25.92184423018543 24.34057729283631 48-49 23.85029070072817 25.77411393379569 25.980085101734 24.39551026374214 50-51 23.935881425565498 25.803883153065303 26.036702468169853 24.223532953199342 52-53 24.130198796697595 25.59670671972394 25.990224480994428 24.282870002584037 54-55 23.575594224899156 25.556101286208616 26.195416492780677 24.672887996111555 56-57 23.68229991575147 25.659874260499326 26.045040396973533 24.612785426775666 58-59 23.70514747308841 25.475926121029897 26.082144174630663 24.736782231251034 60-61 23.65951997099483 25.585344584242936 26.204405730862675 24.550729713899567 62-63 23.679757215361054 25.587483743440153 26.10185518022362 24.630903860975177 64-65 23.4190881534892 25.43795125161526 26.035671995618987 25.107288599276558 66-67 23.477202804048574 25.495392274167234 25.909642419094723 25.117762502689473 68-69 23.548831579759653 25.480289823827924 25.934179208314106 25.03669938809832 70-71 23.340230551271908 25.340699041546976 25.930321081011275 25.388749326169837 72-73 23.377444475799912 25.474695134765145 25.805363586692202 25.342496802742737 74-75 23.318879489646083 25.604692153242464 25.780981115241946 25.295447241869507 76-77 23.22941710639785 25.262146762482594 25.985248012599527 25.523188118520025 78-79 23.17777456719452 25.324538404399526 26.001489216695443 25.49619781171051 80-81 23.29868910300639 25.42949170627126 25.782205477619343 25.48961371310301 82-83 23.120029815291986 25.38124293323995 25.92354382903458 25.575183422433483 84-85 23.070742253182804 25.39867583473457 25.857254383857796 25.67332752822484 86-87 23.003092655948183 25.46777247085732 25.813511464870214 25.715623408324284 88-89 22.866171479807292 25.19832129878874 25.903885070337413 26.031622151066554 90-91 22.746298091994873 25.16760155310898 25.9586041283297 26.12749622656645 92-93 22.807889124903237 24.981458160301184 26.04212645925029 26.168526255545288 94-95 22.631047774407012 24.89310055293723 26.162447540746196 26.313404131909557 96-97 22.552512621638982 24.738112247041943 26.221447481375204 26.48792764994387 98-99 22.317969199704926 24.792334799699645 26.115110655735247 26.774585344860185 100-101 22.220861707199262 24.78650293068441 26.168601123955476 26.824034238160856 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 79.0 1 74.0 2 107.5 3 147.0 4 143.5 5 152.0 6 232.0 7 461.0 8 686.5 9 692.0 10 550.5 11 458.5 12 464.0 13 486.5 14 546.5 15 612.5 16 655.5 17 732.5 18 825.5 19 894.5 20 971.5 21 1093.0 22 1286.5 23 1481.5 24 1742.5 25 2150.5 26 2762.5 27 3707.0 28 5148.0 29 7532.5 30 11130.5 31 16500.0 32 24176.5 33 30634.5 34 35828.5 35 42718.5 36 51685.5 37 60904.0 38 69272.5 39 77730.5 40 85468.0 41 93199.0 42 101806.0 43 110663.0 44 118797.0 45 127813.5 46 135829.5 47 141743.5 48 147706.5 49 150703.5 50 151204.0 51 151711.0 52 151090.0 53 150125.5 54 146936.0 55 138822.5 56 127227.0 57 113647.0 58 102424.5 59 89759.0 60 73718.0 61 60663.0 62 50539.0 63 39326.0 64 28162.0 65 20712.5 66 15793.5 67 12410.5 68 9582.0 69 7217.5 70 5557.5 71 4093.5 72 2876.5 73 2155.0 74 1706.5 75 1278.0 76 872.5 77 533.5 78 305.5 79 181.5 80 98.0 81 59.5 82 43.5 83 31.5 84 19.5 85 10.5 86 8.5 87 6.5 88 4.5 89 2.5 90 3.0 91 3.5 92 2.5 93 2.0 94 0.5 95 0.5 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16422189523231304 2 2.7010180136893597E-4 3 0.010443936319598857 4 0.006092296186432666 5 0.024789343103415677 6 0.0024309162123204234 7 0.0 8 0.0 9 0.0 10-11 0.04653253811361502 12-13 3.901470464217964E-4 14-15 0.0050569059478517454 16-17 0.0 18-19 0.001845695642687729 20-21 1.950735232108982E-4 22-23 0.0 24-25 6.902601590539475E-4 26-27 0.0030761594044795486 28-29 0.005687143484379263 30-31 0.017256503976348685 32-33 0.012049541472180864 34-35 0.010278874107651175 36-37 0.003991504398007609 38-39 1.5005655631607554E-5 40-41 0.003481312106532952 42-43 0.00957360829296562 44-45 0.007652884372119852 46-47 0.003856453497323141 48-49 0.009003393378964532 50-51 0.00282106325874222 52-53 0.002400904901057208 54-55 0.004576724967640304 56-57 0.008043031418541648 58-59 0.015605881856871855 60-61 0.007727912650277889 62-63 0.021893251566515417 64-65 0.04024516840397146 66-67 0.058927209665322854 68-69 0.04921855047167278 70-71 0.06698524673949612 72-73 0.032922408455746975 74-75 0.026965163169998772 76-77 0.22532492496421902 78-79 0.08433178464963445 80-81 0.06546967552070375 82-83 0.027025185792525205 84-85 0.050328968988411736 86-87 0.06761548427602364 88-89 0.2889338991866034 90-91 0.2952362745518786 92-93 0.05315003224715396 94-95 0.009738670504913302 96-97 0.014915621697817908 98-99 9.303506491596682E-4 100-101 1.650622119476831E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3332077.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.00921223232323 #Duplication Level Percentage of deduplicated Percentage of total 1 77.90323306795676 45.19105180623245 2 11.85634549757486 13.755545245371403 3 4.1049755674460435 7.143791967014371 4 1.8658402091986441 4.3294368274802615 5 1.045180297690929 3.031504285489794 6 0.6781010067276598 2.3601663128530115 7 0.45614980509893177 1.8522623597601768 8 0.3327165718394326 1.544050098323573 9 0.2707784429857656 1.4136879750389382 >10 1.4062529020798402 14.334818787854092 >50 0.06214772674288936 2.4282579777381232 >100 0.016305927606073505 1.5420581491129435 >500 0.0014018521188731486 0.5570443081377868 >1k 5.711249333464106E-4 0.5163238995931269 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.0022622526430215E-5 2 0.0 0.0 0.0 0.0 6.0022622526430215E-5 3 0.0 0.0 0.0 0.0 6.0022622526430215E-5 4 0.0 0.0 0.0 0.0 6.0022622526430215E-5 5 0.0 0.0 0.0 0.0 6.0022622526430215E-5 6 0.0 0.0 0.0 0.0 9.003393378964532E-5 7 0.0 0.0 0.0 3.0011311263215107E-5 9.003393378964532E-5 8 0.0 0.0 0.0 3.0011311263215107E-5 9.003393378964532E-5 9 0.0 0.0 0.0 3.0011311263215107E-5 9.003393378964532E-5 10-11 0.0 0.0 0.0 3.0011311263215107E-5 9.003393378964532E-5 12-13 0.0 0.0 0.0 3.0011311263215107E-5 1.3505090068446798E-4 14-15 0.0 0.0 0.0 4.501696689482266E-5 1.650622119476831E-4 16-17 0.0 0.0 0.0 1.2004524505286043E-4 1.8006786757929064E-4 18-19 0.0 0.0 0.0 1.2004524505286043E-4 2.851074570005435E-4 20-21 0.0 0.0 0.0 1.2004524505286043E-4 4.0515270205340395E-4 22-23 0.0 0.0 0.0 1.8006786757929064E-4 4.6517532457983416E-4 24-25 0.0 0.0 0.0 5.101922914746568E-4 5.101922914746568E-4 26-27 0.0 0.0 0.0 0.0011254241723705665 5.402036027378719E-4 28-29 0.0 0.0 0.0 0.006587482822275716 5.552092583694795E-4 30-31 0.0 0.0 0.0 0.028780847501423287 5.70214914001087E-4 32-33 0.0 0.0 0.0 0.0790798051785718 6.002262252643021E-4 34-35 0.0 0.0 0.0 0.14869104165359925 6.002262252643021E-4 36-37 0.0 0.0 0.0 0.2582923503868608 6.002262252643021E-4 38-39 0.0 0.0 0.0 0.4283064286929744 6.152318808959098E-4 40-41 0.0 0.0 0.0 0.6127259364054312 6.902601590539475E-4 42-43 0.0 0.0 0.0 0.8048583511125342 7.202714703171626E-4 44-45 0.0 0.0 0.0 1.0470046160397855 7.652884372119852E-4 46-47 0.0 0.0 0.0 1.3246842735026831 7.802940928435928E-4 48-49 0.0 0.0 0.0 1.6032942816147404 8.553223710016306E-4 50-51 0.0 0.0 0.0 1.8903224625361297 8.703280266332381E-4 52-53 0.0 0.0 0.0 2.1832328604651092 9.453563047912758E-4 54-55 0.0 0.0 0.0 2.5235161132230735 0.0010203845829493134 56-57 0.0 0.0 0.0 2.91496865168482 0.0010654015498441363 58-59 0.0 0.0 0.0 3.3197312066918023 0.0010804072054757439 60-61 0.0 0.0 0.0 3.73780377824402 0.0010804072054757439 62-63 0.0 0.0 0.0 4.163919381214781 0.001140429828002174 64-65 0.0 0.0 0.0 4.631510616351303 0.001170441139265389 66-67 0.0 0.0 0.0 5.16970346123454 0.001170441139265389 68-69 0.0 0.0 0.0 5.743114579885159 0.001170441139265389 70-71 0.0 1.5005655631607554E-5 0.0 6.32961063024654 0.0012004524505286043 72-73 1.5005655631607554E-5 3.0011311263215107E-5 0.0 6.93756476816112 0.0014255372850027175 74-75 3.0011311263215107E-5 3.0011311263215107E-5 0.0 7.574960002424914 0.0014405429406343252 76-77 3.0011311263215107E-5 3.0011311263215107E-5 0.0 8.28247666545521 0.0015005655631607552 78-79 3.0011311263215107E-5 3.0011311263215107E-5 0.0 9.05889929914585 0.0015305768744239704 80-81 3.0011311263215107E-5 6.0022622526430215E-5 0.0 9.83919339198944 0.001545582530055578 82-83 3.0011311263215107E-5 6.0022622526430215E-5 0.0 10.646182546201665 0.0015905994969504006 84-85 3.0011311263215107E-5 6.0022622526430215E-5 0.0 11.483948300114314 0.0015905994969504006 86-87 6.0022622526430215E-5 6.0022622526430215E-5 0.0 12.38413758145445 0.0015905994969504006 88-89 6.0022622526430215E-5 6.0022622526430215E-5 0.0 13.347950842672603 0.0015905994969504006 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2445 0.0 44.52184 1 GTATCAA 4370 0.0 39.05076 1 TCAACGC 5230 0.0 32.033024 4 ATCAACG 5395 0.0 31.053793 3 CAACGCA 5425 0.0 30.9048 5 TATCAAC 5675 0.0 29.688885 2 AACGCAG 5855 0.0 28.712341 6 GTACATG 8375 0.0 27.811712 1 GTATACG 150 1.0542699E-6 25.352173 1 TACATGG 9070 0.0 24.95988 2 ACATGGG 9425 0.0 23.365122 3 ACGCAGA 7190 0.0 23.182348 7 CGCAGAG 7560 0.0 21.796505 8 CATGGGG 7840 0.0 21.247898 4 TAAGGCG 1150 0.0 19.411137 5 GAGTACA 6605 0.0 18.999735 1 GCAGAGT 8600 0.0 18.112051 9 AGAGTAC 7050 0.0 17.816763 10-11 ATGGGGG 4715 0.0 17.628172 5 GTATTAA 2125 0.0 17.224564 1 >>END_MODULE