##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921649_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3519894 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.289169787499283 33.0 31.0 34.0 28.0 34.0 2 31.416566521605482 34.0 31.0 34.0 28.0 34.0 3 31.490954273054815 34.0 31.0 34.0 28.0 34.0 4 34.96550322254022 37.0 35.0 37.0 32.0 37.0 5 34.69950515555298 37.0 35.0 37.0 32.0 37.0 6 34.670275298062954 37.0 35.0 37.0 32.0 37.0 7 34.553241660118175 37.0 35.0 37.0 32.0 37.0 8 34.49450835735394 37.0 35.0 37.0 31.0 37.0 9 36.075315904399396 39.0 37.0 39.0 31.0 39.0 10-11 35.96895815612629 39.0 37.0 39.0 31.0 39.0 12-13 35.89012268551269 39.0 37.0 39.0 30.5 39.0 14-15 37.124711852118274 40.0 38.0 41.0 31.0 41.0 16-17 37.087509311359945 40.0 38.0 41.0 31.0 41.0 18-19 37.04558716824995 40.0 38.0 41.0 31.0 41.0 20-21 36.98574914471857 40.0 38.0 41.0 30.5 41.0 22-23 36.892504575421874 40.0 37.0 41.0 30.0 41.0 24-25 36.8084126965187 40.0 37.0 41.0 30.0 41.0 26-27 36.67722849040341 40.0 37.0 41.0 30.0 41.0 28-29 36.55531217701442 40.0 37.0 41.0 30.0 41.0 30-31 36.400262479495126 40.0 37.0 41.0 29.5 41.0 32-33 36.34680405148564 40.0 36.5 41.0 29.5 41.0 34-35 36.47216620727784 40.0 37.0 41.0 30.0 41.0 36-37 36.46457592188855 40.0 37.0 41.0 30.0 41.0 38-39 36.35739329082069 40.0 37.0 41.0 29.0 41.0 40-41 36.275641113056246 40.0 36.5 41.0 29.0 41.0 42-43 36.151907415393765 40.0 36.0 41.0 28.5 41.0 44-45 36.022043419489336 40.0 36.0 41.0 28.0 41.0 46-47 35.873053279445344 40.0 36.0 41.0 27.5 41.0 48-49 35.728837004750716 40.0 35.0 41.0 27.0 41.0 50-51 35.57093778960389 39.5 35.0 41.0 27.0 41.0 52-53 35.39707360505743 39.0 35.0 41.0 26.0 41.0 54-55 35.18401733120372 39.0 35.0 41.0 26.0 41.0 56-57 34.96037778410373 39.0 35.0 41.0 26.0 41.0 58-59 34.71911014933973 38.5 35.0 40.5 25.5 41.0 60-61 34.44500388363967 38.0 34.0 40.0 25.0 41.0 62-63 34.14374680032978 37.5 34.0 40.0 24.0 41.0 64-65 33.810157209279595 37.0 34.0 40.0 23.0 41.0 66-67 33.464664987070634 36.0 34.0 39.0 22.5 41.0 68-69 33.10807967512658 36.0 33.5 39.0 22.0 41.0 70-71 32.71299732321485 35.0 33.0 38.5 21.0 40.0 72-73 32.35197082639421 35.0 33.0 37.5 20.0 40.0 74-75 31.949902326604153 35.0 33.0 37.0 19.0 39.0 76-77 29.23600625473381 33.0 29.0 34.5 11.5 36.5 78-79 30.805154217712236 34.5 31.5 36.0 13.0 37.5 80-81 30.98232120058161 35.0 32.0 35.5 14.5 37.0 82-83 30.797315061192183 35.0 32.0 35.0 11.5 37.0 84-85 30.589200839570736 35.0 32.0 35.0 8.5 36.5 86-87 30.372872023987085 35.0 32.0 35.0 6.0 36.0 88-89 30.09200703202994 35.0 31.0 35.0 2.0 36.0 90-91 29.884130885759628 34.0 31.0 35.0 2.0 35.0 92-93 29.715545127211218 34.0 31.0 35.0 2.0 35.0 94-95 29.596433443734384 34.0 31.0 35.0 2.0 35.0 96-97 29.378903171515958 34.0 31.0 35.0 2.0 35.0 98-99 29.164089458375734 34.0 31.0 35.0 2.0 35.0 100-101 28.039392805578803 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 73242.0 3 24119.0 4 12935.0 5 9083.0 6 8156.0 7 8033.0 8 8305.0 9 9096.0 10 9663.0 11 10524.0 12 11448.0 13 11946.0 14 12761.0 15 13622.0 16 14176.0 17 15203.0 18 14436.0 19 13546.0 20 13290.0 21 13039.0 22 13980.0 23 15886.0 24 18454.0 25 22681.0 26 26975.0 27 31780.0 28 38745.0 29 46411.0 30 56333.0 31 69934.0 32 88512.0 33 116106.0 34 164895.0 35 247090.0 36 433095.0 37 828588.0 38 882023.0 39 111782.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.41247055147669 19.512671935411447 12.66880523865718 26.406052274454687 2 15.542828505574185 21.111274310794638 36.910076942810946 26.435820240820227 3 17.92559271559965 24.56425178312617 29.197183366713826 28.312972134560354 4 12.965500547066936 16.527018515040716 35.479343428761545 35.0281375091308 5 13.998803642496553 37.391485969795525 34.534493317021955 14.075217070685971 6 33.80633940067526 35.68225492836582 16.691639477838123 13.8197661931208 7 28.880443558811713 31.72547241479431 21.162938429395886 18.23114559699809 8 26.692593583784056 34.73124474771115 19.982505154984782 18.59365651352001 9 26.646541060611483 15.006162117381944 19.19293592363861 39.15436089836796 10-11 25.568971373430145 25.176047080425267 28.17281960983277 21.082161936311817 12-13 25.941884464975416 22.69819894684059 27.778038202952654 23.581878385231335 14-15 23.150330431442416 24.349546334200493 24.796755647791517 27.703367586565562 16-17 23.558667328997313 27.42727869465369 25.673688706774794 23.340365269574207 18-19 23.534946778800613 26.837343082266855 26.865923943090564 22.761786195841967 20-21 24.028302633225607 26.1022769355074 26.692935521037693 23.1764849102293 22-23 23.8897108833391 25.898535580901015 26.43652053158419 23.775233004175693 24-25 23.705425352327154 26.011852101860235 26.49620072491066 23.786521820901953 26-27 23.486390412177062 26.253566255790815 26.48177537460957 23.778267957422557 28-29 23.60763011833789 26.44121624242001 26.361664222572912 23.58948941666919 30-31 23.914206319517483 26.16290410872492 26.174468897041702 23.74842067471589 32-33 23.64884792574353 26.252941487345566 26.05650610687153 24.041704480039368 34-35 24.00114390403708 26.22311924958077 26.20611411877622 23.569622727605932 36-37 24.002606426600213 26.044307263432483 26.27314379113471 23.679942518832597 38-39 23.83716668740593 26.17404103646303 26.266827921522633 23.721964354608403 40-41 23.981051015742093 26.025263323575583 26.29069286272257 23.70299279795975 42-43 23.88212662699046 25.97340274325852 26.11306455171344 24.03140607803758 44-45 23.70309400434021 26.04760535576589 26.30116778789685 23.948132851997048 46-47 23.870290827530745 25.998500184600314 26.11239978561078 24.01880920225816 48-49 23.61739934384235 26.152161294199512 26.200419879525434 24.03001948243271 50-51 23.715536354947844 26.098188645023747 26.239006465147412 23.947268534881 52-53 23.914258951637166 25.957325792062175 26.160261671654123 23.968153584646533 54-55 23.38328394999294 25.917630917939178 26.43492720917408 24.2641579228938 56-57 23.4906659760625 25.98265126937583 26.266687331755794 24.259995422805876 58-59 23.512583024577307 25.860492711113043 26.351547275083327 24.27537698922632 60-61 23.47518336013765 25.957877279935516 26.422696951354034 24.144242408572797 62-63 23.476337224914644 25.92115676153373 26.365058458967898 24.237447554583728 64-65 23.24329002335814 25.779205101303166 26.311552438863046 24.665952436475646 66-67 23.214620491059403 25.955109759572913 26.17429489006276 24.655974859304923 68-69 23.380219197371577 25.85177139087308 26.19113975555643 24.576869656198912 70-71 23.215503602695662 25.667028191857582 26.221554766802036 24.89591343864472 72-73 23.179803567802555 25.870128076384585 26.127679081075065 24.82238927473779 74-75 23.177247141719423 25.979282128082517 26.009561111044015 24.83390961915405 76-77 23.14938007159947 25.700365685501925 26.195867049081016 24.95438719381759 78-79 23.10571003121738 25.757964782563075 26.18255130651522 24.953773879704325 80-81 23.187502256533858 25.892926437991303 25.973692582051832 24.945878723423007 82-83 23.13749756673539 25.84432505857596 26.049770740295003 24.968406634393645 84-85 23.05546384781306 25.778124996002838 26.06594913391966 25.10046202226445 86-87 22.96167458378619 25.961177353238096 25.985854089415643 25.09129397356007 88-89 22.872799356725178 25.732616962555227 26.015645346315846 25.37893833440375 90-91 22.731835255192713 25.727815813811144 26.116167569287313 25.424181361708833 92-93 22.861468724271003 25.54125671414434 26.158219656146553 25.439054905438102 94-95 22.73220558098898 25.454196751703883 26.19999076583216 25.613606901474984 96-97 22.64324376775261 25.355641830307157 26.21769793598383 25.7834164659564 98-99 22.478776132446253 25.33519818129027 26.16940797043517 26.01661771582831 100-101 22.358309331609036 25.36519648647712 26.219584952467212 26.056909229446635 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 61.0 1 55.5 2 86.5 3 128.0 4 120.5 5 129.5 6 224.5 7 433.0 8 604.5 9 628.5 10 528.5 11 418.5 12 413.5 13 463.5 14 500.5 15 566.5 16 642.5 17 667.0 18 717.0 19 790.5 20 894.5 21 1063.0 22 1261.5 23 1477.0 24 1812.5 25 2311.0 26 3091.5 27 4276.5 28 6125.5 29 9198.0 30 14092.5 31 20947.0 32 30502.0 33 38531.0 34 45152.5 35 53734.0 36 64137.0 37 74548.0 38 83379.5 39 92264.5 40 99913.0 41 107086.5 42 115107.5 43 123171.0 44 131332.0 45 139975.5 46 145422.0 47 149258.0 48 153917.0 49 155379.5 50 154430.5 51 153522.0 52 152091.5 53 150043.0 54 145767.5 55 136933.5 56 125128.5 57 111849.5 58 100354.0 59 87447.5 60 71391.0 61 58600.0 62 48692.0 63 37633.0 64 27112.5 65 20126.0 66 15181.0 67 11694.0 68 9143.0 69 6971.5 70 5228.5 71 3734.5 72 2677.0 73 2062.5 74 1563.5 75 1100.5 76 737.0 77 454.5 78 262.5 79 154.0 80 101.0 81 68.5 82 40.0 83 25.0 84 17.0 85 12.5 86 10.0 87 6.0 88 4.5 89 3.5 90 2.0 91 1.5 92 1.5 93 1.5 94 1.0 95 1.5 96 1.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1622492040953506 2 1.9886962505120893E-4 3 0.010596910020585848 4 0.006108138483715702 5 0.024972342917144664 6 0.0018750564647685415 7 0.0 8 0.0 9 0.0 10-11 0.04713210113713651 12-13 2.5568951792298295E-4 14-15 0.005042765492369941 16-17 1.4204973217943495E-5 18-19 0.0015909570004096715 20-21 2.698944911409264E-4 22-23 0.0 24-25 3.4091935723064385E-4 26-27 0.002727354857845151 28-29 0.00524163511742115 30-31 0.01677607337039127 32-33 0.011818537717328988 34-35 0.010454860288406413 36-37 0.003764317902755026 38-39 0.0 40-41 0.003622268170575591 42-43 0.00910538783270178 44-45 0.0070456667160999735 46-47 0.003622268170575591 48-49 0.008892313234432628 50-51 0.002784174750716925 52-53 0.0017898266254608806 54-55 0.004289901911818936 56-57 0.007684890510907432 58-59 0.015043066637802163 60-61 0.007088281635753804 62-63 0.021563149344838228 64-65 0.04035632891217747 66-67 0.05941940297065764 68-69 0.049447511771661304 70-71 0.06787136203533402 72-73 0.03333907214251338 74-75 0.02703206403374647 76-77 0.22718013667457032 78-79 0.08361047236081541 80-81 0.06622358514205257 82-83 0.027245138632015626 84-85 0.050385040004045575 86-87 0.06849638085692354 88-89 0.2940997655043021 90-91 0.30044938853272285 92-93 0.052686245665352426 94-95 0.010128145904393713 96-97 0.014702147280571518 98-99 0.0010227580716919318 100-101 2.2727957148709592E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3519894.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.596766625597716 #Duplication Level Percentage of deduplicated Percentage of total 1 77.96559601583466 45.68531834565495 2 12.141307729679992 14.228827511312483 3 4.002302615984445 7.0356597706157915 4 1.8257084318082948 4.279224436202265 5 1.008671679358905 2.9552449498621742 6 0.6416761669113811 2.256008916102857 7 0.44064976810191436 1.8074456137564143 8 0.3258059200981641 1.5272938772184208 9 0.25235796039766856 1.3308624460380614 >10 1.3102135847585672 13.550266580599061 >50 0.06430243219077927 2.542480465369057 >100 0.019707022910925652 1.8570754161471779 >500 0.001068993815348616 0.4262908197898686 >1k 6.316781489667943E-4 0.5180008513314609 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.840994643588699E-5 2 0.0 0.0 0.0 0.0 2.840994643588699E-5 3 0.0 0.0 0.0 0.0 2.840994643588699E-5 4 0.0 0.0 0.0 0.0 2.840994643588699E-5 5 0.0 0.0 0.0 0.0 2.840994643588699E-5 6 0.0 0.0 0.0 0.0 2.840994643588699E-5 7 0.0 0.0 0.0 0.0 2.840994643588699E-5 8 0.0 0.0 0.0 0.0 2.840994643588699E-5 9 0.0 0.0 0.0 2.840994643588699E-5 2.840994643588699E-5 10-11 0.0 0.0 0.0 2.840994643588699E-5 2.840994643588699E-5 12-13 0.0 0.0 0.0 2.840994643588699E-5 7.102486608971748E-5 14-15 0.0 0.0 0.0 5.681989287177398E-5 1.4204973217943497E-4 16-17 0.0 0.0 0.0 5.681989287177398E-5 1.8466465183326544E-4 18-19 0.0 0.0 0.0 5.681989287177398E-5 1.9886962505120893E-4 20-21 0.0 0.0 0.0 1.4204973217943497E-4 2.2727957148709592E-4 22-23 0.0 0.0 0.0 2.556895179229829E-4 2.9830443757681343E-4 24-25 0.0 0.0 0.0 5.539939554997963E-4 3.409193572306439E-4 26-27 0.0 0.0 0.0 0.0011079879109995926 3.693293036665309E-4 28-29 0.0 0.0 0.0 0.0041052372599856704 3.693293036665309E-4 30-31 0.0 0.0 0.0 0.017259042459801345 3.693293036665309E-4 32-33 0.0 0.0 0.0 0.052927730210057464 3.9773925010241787E-4 34-35 0.0 0.0 0.0 0.10356845973202602 3.9773925010241787E-4 36-37 0.0 0.0 0.0 0.18950854770058417 3.9773925010241787E-4 38-39 0.0 0.0 0.0 0.32621720995007236 4.1194422332036136E-4 40-41 0.0 0.0 0.0 0.4767331061674016 4.2614919653830485E-4 42-43 0.0 0.0 0.0 0.6379595521910603 4.2614919653830485E-4 44-45 0.0 0.0 0.0 0.8367155374565257 4.4035416975624834E-4 46-47 0.0 0.0 0.0 1.0693361788735682 4.829690894100788E-4 48-49 0.0 0.0 0.0 1.3053802188361354 5.966088751536267E-4 50-51 0.0 0.0 0.0 1.5535553059268263 5.966088751536267E-4 52-53 0.0 0.0 0.0 1.8094578984480783 6.534287680254008E-4 54-55 0.0 0.0 0.0 2.1077907459713274 6.818387144612878E-4 56-57 0.0 0.0 0.0 2.450087985604112 7.102486608971748E-4 58-59 0.0 0.0 0.0 2.809274938393031 7.528635805510053E-4 60-61 0.0 0.0 0.0 3.179271875800805 7.670685537689488E-4 62-63 0.0 0.0 0.0 3.553430870361437 7.670685537689488E-4 64-65 0.0 0.0 0.0 3.9628892233686583 7.812735269868922E-4 66-67 0.0 0.0 0.0 4.4418383053580595 7.954785002048357E-4 68-69 0.0 0.0 0.0 4.951058185274897 7.954785002048357E-4 70-71 0.0 0.0 0.0 5.47316197590041 8.522983930766097E-4 72-73 0.0 0.0 0.0 6.014882834539904 9.517332056022141E-4 74-75 0.0 0.0 0.0 6.578919706104786 9.80143152038101E-4 76-77 0.0 0.0 0.0 7.224890863190767 9.943481252560446E-4 78-79 0.0 0.0 0.0 7.929542764640072 0.001036963044909875 80-81 0.0 0.0 0.0 8.644237582154464 0.001093782937781649 82-83 0.0 0.0 0.0 9.379870530192102 0.0011648078038713665 84-85 0.0 0.0 0.0 10.135262595975902 0.0011648078038713665 86-87 0.0 0.0 0.0 10.948852437033615 0.0011790127770893101 88-89 0.0 0.0 0.0 11.825796458643357 0.0011932177503072535 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2425 0.0 44.09867 1 GTATCAA 4145 0.0 38.527378 1 TCAACGC 4835 0.0 32.099686 4 CAACGCA 5010 0.0 30.619514 5 ATCAACG 5155 0.0 30.291649 3 TATCAAC 5385 0.0 28.733437 2 AACGCAG 5385 0.0 28.483185 6 GTACATG 8310 0.0 27.510517 1 TACATGG 8650 0.0 26.008654 2 ACATGGG 8835 0.0 24.013567 3 ACGCAGA 6725 0.0 22.313124 7 CGCAGAG 7060 0.0 21.052574 8 CATGGGG 7440 0.0 20.732895 4 GAGTACA 6410 0.0 17.350523 1 ATGGGGG 4345 0.0 16.833113 5 GCAGAGT 8200 0.0 16.678482 9 AGAGTAC 6885 0.0 16.31192 10-11 CCGTATA 235 5.1509363E-5 16.165905 9 GTATTAA 2065 0.0 15.881217 1 GTATTAT 1085 0.0 15.331796 1 >>END_MODULE