##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921648_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2567008 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.95124985975891 33.0 31.0 34.0 28.0 34.0 2 31.020206014161232 33.0 31.0 34.0 28.0 34.0 3 31.08274458046099 34.0 31.0 34.0 27.0 34.0 4 34.53253632244231 37.0 35.0 37.0 32.0 37.0 5 34.53188459093232 37.0 35.0 37.0 32.0 37.0 6 34.58376600306661 37.0 35.0 37.0 32.0 37.0 7 34.50956366322193 37.0 35.0 37.0 32.0 37.0 8 34.48481539597851 37.0 35.0 37.0 32.0 37.0 9 36.11598950996647 39.0 37.0 39.0 32.0 39.0 10-11 36.02711639387178 39.0 37.0 39.0 32.0 39.0 12-13 35.936099147334176 39.0 37.0 39.0 31.0 39.0 14-15 37.16947239743702 40.0 38.0 41.0 31.0 41.0 16-17 37.11401444794874 40.0 38.0 41.0 31.0 41.0 18-19 37.07882425765716 40.0 38.0 41.0 31.0 41.0 20-21 37.0058614932248 40.0 38.0 41.0 31.0 41.0 22-23 36.90776168208279 40.0 38.0 41.0 30.5 41.0 24-25 36.80791158422568 40.0 37.0 41.0 30.0 41.0 26-27 36.672930703760954 40.0 37.0 41.0 30.0 41.0 28-29 36.54648836310599 40.0 37.0 41.0 30.0 41.0 30-31 36.40997982865655 40.0 37.0 41.0 30.0 41.0 32-33 36.24644722571959 40.0 36.5 41.0 29.0 41.0 34-35 36.07916317362471 40.0 36.0 41.0 28.5 41.0 36-37 36.053523985901094 40.0 36.5 41.0 28.5 41.0 38-39 36.238409268689466 40.0 37.0 41.0 29.5 41.0 40-41 36.30184381973098 40.0 37.0 41.0 29.0 41.0 42-43 36.149214766763485 40.0 37.0 41.0 28.0 41.0 44-45 36.03529926669492 40.0 36.0 41.0 28.0 41.0 46-47 35.88090473422755 40.0 36.0 41.0 27.5 41.0 48-49 35.72410311927349 40.0 36.0 41.0 27.0 41.0 50-51 34.026229953315294 38.0 33.0 39.5 24.0 40.0 52-53 34.157958993505275 38.5 34.0 39.5 23.5 40.0 54-55 35.06103214325783 39.0 35.0 40.5 26.0 41.0 56-57 35.06817664767698 39.0 35.0 41.0 26.0 41.0 58-59 34.87313518306137 39.0 35.0 41.0 26.0 41.0 60-61 34.61824778107431 38.5 35.0 41.0 25.0 41.0 62-63 34.32341406805121 37.5 34.5 40.0 24.0 41.0 64-65 34.02444694367918 37.0 34.0 40.0 23.5 41.0 66-67 33.676778958226855 36.5 34.0 39.5 23.0 41.0 68-69 33.31531826157145 36.0 34.0 39.0 22.0 41.0 70-71 32.9047102696992 35.5 34.0 39.0 21.5 41.0 72-73 32.535316796831175 35.0 33.0 37.5 20.0 40.0 74-75 32.12806037223102 35.0 33.0 37.0 18.5 39.0 76-77 31.756278710467598 35.0 33.0 37.0 17.5 39.0 78-79 31.412708296974532 35.0 33.0 36.0 14.0 39.0 80-81 31.099352631546143 35.0 32.5 36.0 9.5 37.0 82-83 30.792578363604633 35.0 32.0 35.0 6.0 37.0 84-85 30.533092222540795 35.0 32.0 35.0 2.0 36.5 86-87 30.30475869183111 35.0 32.0 35.0 2.0 36.0 88-89 30.0872628756903 35.0 32.0 35.0 2.0 36.0 90-91 29.867464378763135 35.0 32.0 35.0 2.0 35.5 92-93 29.680656234807216 35.0 31.0 35.0 2.0 35.0 94-95 29.453969757788055 35.0 31.0 35.0 2.0 35.0 96-97 29.219015873733156 35.0 31.0 35.0 2.0 35.0 98-99 28.962645811777758 35.0 31.0 35.0 2.0 35.0 100-101 27.898402926675725 34.0 28.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 67477.0 3 12167.0 4 8285.0 5 6574.0 6 5936.0 7 6090.0 8 6380.0 9 6620.0 10 7483.0 11 7764.0 12 7963.0 13 8041.0 14 8612.0 15 9306.0 16 9191.0 17 9790.0 18 9434.0 19 8979.0 20 9273.0 21 9769.0 22 10427.0 23 12063.0 24 14267.0 25 16879.0 26 20117.0 27 23647.0 28 27970.0 29 33070.0 30 39392.0 31 48283.0 32 61182.0 33 80506.0 34 114109.0 35 174074.0 36 310581.0 37 592883.0 38 646404.0 39 116013.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.25007969708094 17.845053285974952 12.467975023831182 25.436891993112926 2 16.45539670951313 19.4255582792864 38.77600499236606 25.34304001883441 3 19.49705586929907 22.99423178788071 29.069816842992296 28.438895499827915 4 13.51999005301292 15.237365436012848 35.834683569268954 35.40796094170528 5 14.488750966115507 36.7406858280063 34.239484395407544 14.531078810470646 6 34.28350919514973 34.80680913265918 16.64212237239694 14.267559299794138 7 29.357621593570332 31.151345663173373 20.922053650427177 18.568979092829117 8 26.76831273347245 34.40926113226248 19.931631630539638 18.89079450372543 9 26.78741521311695 15.111748634624877 19.20002399803341 38.90081215422476 10-11 25.841240206545248 24.778027363135134 27.847531160129062 21.533201270190556 12-13 26.209743955298304 22.266804778212716 27.515381209102035 24.008070057386945 14-15 23.39212166015419 23.928928696827363 24.605617320298244 28.07333232272021 16-17 23.798458704214287 26.900221008941667 25.545606083512702 23.755714203331344 18-19 23.79272567325333 26.286830092338455 26.69436833228597 23.226075902122254 20-21 24.27775326341382 25.628023911732704 26.491254216551773 23.6029686083017 22-23 24.175160221657578 25.408944433825674 26.260472396944834 24.155422947571918 24-25 23.96801793745039 25.622259864681986 26.258674619123383 24.151047578744244 26-27 23.76997377741585 25.776040428756787 26.304778121091456 24.149207672735916 28-29 23.982760672843366 25.939503005720017 26.10798851984239 23.96974780159423 30-31 24.09022577482439 25.70650694891815 25.956809429404238 24.246457846853218 32-33 23.825294961921042 25.797655576732176 25.946694914858035 24.430354546488743 34-35 24.221696202058233 25.800704673095264 25.976249618211174 24.001349506635332 36-37 24.37278729345475 25.54834607976963 25.964611498594465 24.114255128181156 38-39 24.040979152017112 25.766357670589013 26.014905051394376 24.177758125999496 40-41 24.27194432043332 25.562919608846833 26.105406599365633 24.05972947135421 42-43 24.127775145591965 25.55218011332015 25.933185757472394 24.38685898361549 44-45 24.00388924091132 25.599032059705777 26.097145965146655 24.299932734236247 46-47 24.18359208556851 25.635376297598107 25.902348670132653 24.278682946700734 48-49 23.966867330012054 25.72823546719102 25.87097738410804 24.43391981868889 50-51 23.97495228491044 25.794905200949643 26.045074103489895 24.18506841065002 52-53 24.262642497772383 25.585536123693792 25.975903294766823 24.175918083767005 54-55 23.81591480119668 25.47592262869821 26.205175750041263 24.502986820063846 56-57 23.863014243855844 25.627370772995402 26.109671017384272 24.399943965764486 58-59 23.920004604837615 25.449805806583157 26.15850202290907 24.471687565670155 60-61 23.835372609348397 25.512765426866462 26.27419140198616 24.37767056179898 62-63 23.909772969155295 25.4934772408236 26.332358797115994 24.264390992905103 64-65 23.77765607693765 25.434255109890717 26.170319740450736 24.61776907272089 66-67 23.736481903001565 25.476248866236713 26.13142699169214 24.655842239069585 68-69 23.90412450135158 25.428299195295377 26.203857463026665 24.463718840326376 70-71 23.764684125606518 25.222235812538685 26.173115792032263 24.839964269822534 72-73 23.78621002075415 25.34382473337415 26.088188161589727 24.78177708428198 74-75 23.75619058767296 25.50238258977998 26.134254178677164 24.607172643869895 76-77 23.80432621843031 25.16755263996242 26.224360861420042 24.803760280187227 78-79 23.719062010317398 25.253598395826373 26.238256153842705 24.789083440013535 80-81 23.87395535687977 25.328957574615135 26.113409503225327 24.68367756527977 82-83 23.7689659290388 25.306065741008865 26.23001938058616 24.694948949366168 84-85 23.739856402819807 25.33479309686127 26.204368324796473 24.72098217552245 86-87 23.774792059047208 25.36179998676859 26.172858009617556 24.69054994456664 88-89 23.644465224905122 25.17268120501 26.205704704796908 24.977148865287976 90-91 23.647176833111835 25.225195688701284 26.228940656218224 24.898686821968656 92-93 23.782266493584757 25.01305529904636 26.42310565464226 24.781572552726626 94-95 23.663898528983285 24.859766794174167 26.46056130752011 25.015773369322442 96-97 23.743741051675062 24.73221381363752 26.436435471355214 25.087609663332206 98-99 23.6097092607988 24.752311589366492 26.367652970816795 25.27032617901791 100-101 23.806879759273023 24.58856324381862 26.44893558761805 25.15562140929031 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 39.0 1 32.0 2 52.5 3 76.0 4 66.0 5 77.5 6 135.0 7 252.0 8 404.0 9 459.5 10 413.5 11 398.0 12 419.5 13 452.5 14 538.5 15 623.5 16 693.0 17 775.0 18 846.5 19 929.5 20 1007.5 21 1110.5 22 1199.0 23 1319.0 24 1504.0 25 1739.5 26 2151.0 27 2811.5 28 3869.5 29 5567.0 30 8496.5 31 12962.5 32 18964.5 33 24182.5 34 28997.0 35 35038.0 36 42463.0 37 50100.0 38 56782.5 39 62940.5 40 68924.0 41 74805.0 42 80487.5 43 86569.5 44 92495.5 45 99389.0 46 104155.5 47 107477.0 48 110933.0 49 112149.0 50 111604.0 51 110791.5 52 110692.0 53 110584.5 54 108706.0 55 103432.5 56 95463.5 57 85965.0 58 78675.5 59 70105.0 60 58119.5 61 48200.5 62 40169.5 63 31175.5 64 22512.0 65 16655.5 66 12890.5 67 10272.5 68 7986.0 69 6110.5 70 4720.5 71 3456.5 72 2510.0 73 1932.0 74 1519.5 75 1202.0 76 885.0 77 616.0 78 437.0 79 301.5 80 208.5 81 143.5 82 119.5 83 98.5 84 82.5 85 74.5 86 53.5 87 41.0 88 39.0 89 33.0 90 31.5 91 27.0 92 22.5 93 20.0 94 15.0 95 10.0 96 12.0 97 12.0 98 8.5 99 6.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.040592004387987886 2 0.058083184781660205 3 0.05434342238123138 4 0.05481089268128499 5 0.05146068886423416 6 0.00857028883431606 7 0.010946596192921876 8 0.012621698101447287 9 0.005103217442251835 10-11 0.011939970580535784 12-13 0.01883515750632643 14-15 0.035410875229060446 16-17 0.02321769156932896 18-19 0.00993374387613907 20-21 0.01891306922300203 22-23 0.03106729702439572 24-25 0.029489584761714805 26-27 0.020179134618980542 28-29 0.012407440880589387 30-31 0.012212661588900385 32-33 0.009193582567720864 34-35 0.005609643600643239 36-37 6.232937334048044E-4 38-39 0.0036228948254154254 40-41 0.0013244991834852093 42-43 0.18348209277103927 44-45 0.1573816676847131 46-47 0.16345878158540994 48-49 0.169107381044391 50-51 0.16125777558932422 52-53 0.16721802191500768 54-55 0.16552344207731334 56-57 0.16708167641082536 58-59 0.17473650257420312 60-61 0.17837887532878743 62-63 0.16558187586482007 64-65 0.16585456687318464 66-67 0.16336139193956545 68-69 0.1589399020182251 70-71 0.15225897231329236 72-73 0.16154994452685772 74-75 0.16149151073935103 76-77 0.15611560228873458 78-79 0.1730614006656777 80-81 0.18346261484187038 82-83 0.18114474127077126 84-85 0.17500919358256772 86-87 0.19176021266782184 88-89 0.1858973559879829 90-91 0.19100057343023472 92-93 0.18815679577157532 94-95 0.19230559468455102 96-97 0.1977399369226742 98-99 0.19158491130530172 100-101 0.19873331131028807 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2567008.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.837263768754525 #Duplication Level Percentage of deduplicated Percentage of total 1 80.04579346331828 49.498128439704594 2 11.076491317930905 13.698798305184257 3 3.5380689848990086 6.5635351515374865 4 1.6422888064308705 4.0621858443095515 5 0.9383631461258483 2.901290468893121 6 0.5822981689583473 2.1604635279564066 7 0.41833186389279564 1.8107948467289465 8 0.30533258254776424 1.510474515536089 9 0.23201370706290397 1.2912383521453807 >10 1.1612306291829178 12.366158237576668 >50 0.04621662131571148 1.9376302086666721 >100 0.01205370574202623 1.3298648740214702 >500 9.481266203534367E-4 0.4146282193842426 >1k 5.688759721919975E-4 0.4548090083551673 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1686757501340082E-4 2 0.0 0.0 0.0 0.0 1.558234333512011E-4 3 0.0 0.0 0.0 0.0 1.558234333512011E-4 4 0.0 0.0 0.0 0.0 1.9477929168900136E-4 5 0.0 3.895585833780027E-5 0.0 0.0 1.9477929168900136E-4 6 0.0 3.895585833780027E-5 0.0 0.0 1.9477929168900136E-4 7 0.0 3.895585833780027E-5 0.0 0.0 1.9477929168900136E-4 8 0.0 3.895585833780027E-5 0.0 0.0 1.9477929168900136E-4 9 0.0 3.895585833780027E-5 0.0 0.0 2.3373515002680163E-4 10-11 0.0 3.895585833780027E-5 0.0 3.895585833780027E-5 2.3373515002680163E-4 12-13 0.0 3.895585833780027E-5 0.0 3.895585833780027E-5 2.726910083646019E-4 14-15 0.0 3.895585833780027E-5 0.0 3.895585833780027E-5 3.311247958713023E-4 16-17 0.0 3.895585833780027E-5 0.0 3.895585833780027E-5 4.6747030005360327E-4 18-19 0.0 3.895585833780027E-5 0.0 3.895585833780027E-5 4.6747030005360327E-4 20-21 0.0 3.895585833780027E-5 0.0 3.895585833780027E-5 5.64859945898104E-4 22-23 0.0 3.895585833780027E-5 0.0 9.738964584450068E-5 6.232937334048044E-4 24-25 0.0 3.895585833780027E-5 0.0 4.0903651254690286E-4 6.622495917426046E-4 26-27 0.0 3.895585833780027E-5 0.0 6.817275209115047E-4 6.622495917426046E-4 28-29 0.0 3.895585833780027E-5 0.0 0.0029216893753350203 7.012054500804049E-4 30-31 0.0 3.895585833780027E-5 0.0 0.011881536793029083 7.012054500804049E-4 32-33 0.0 3.895585833780027E-5 0.0 0.03544983108739825 7.791171667560054E-4 34-35 0.0 3.895585833780027E-5 0.0 0.06579644473254466 7.791171667560054E-4 36-37 0.0 3.895585833780027E-5 0.0 0.11795833904685922 7.791171667560054E-4 38-39 0.0 3.895585833780027E-5 0.0 0.2028041985065882 7.791171667560054E-4 40-41 0.0 3.895585833780027E-5 0.0 0.3017520786846009 7.985950959249056E-4 42-43 0.0 3.895585833780027E-5 0.0 0.40792627058427555 8.180730250938057E-4 44-45 0.0 3.895585833780027E-5 0.0 0.5443107306249143 8.180730250938057E-4 46-47 0.0 3.895585833780027E-5 0.0 0.7002315536219599 8.180730250938057E-4 48-49 0.0 3.895585833780027E-5 0.0 0.8633786883406673 8.57028883431606E-4 50-51 0.0 3.895585833780027E-5 0.0 1.0401408955484361 8.959847417694063E-4 52-53 0.0 3.895585833780027E-5 0.0 1.2228828270110572 9.738964584450067E-4 54-55 0.0 3.895585833780027E-5 0.0 1.432017352497538 0.0010907640334584076 56-57 0.0 3.895585833780027E-5 0.0 1.6795428763759208 0.0010907640334584076 58-59 0.0 3.895585833780027E-5 0.0 1.9378007392263679 0.0011102419626273078 60-61 0.0 3.895585833780027E-5 0.0 2.21208893778282 0.0011297198917962078 62-63 0.0 3.895585833780027E-5 0.0 2.4962524464279037 0.0011297198917962078 64-65 0.0 3.895585833780027E-5 0.0 2.8095744150388313 0.0011297198917962078 66-67 0.0 3.895585833780027E-5 0.0 3.176694424014261 0.0011297198917962078 68-69 0.0 3.895585833780027E-5 0.0 3.5731481943180543 0.0011297198917962078 70-71 0.0 5.843378750670041E-5 0.0 3.9846389259402386 0.0011297198917962078 72-73 0.0 7.791171667560054E-5 0.0 4.414614212343709 0.0012271095376407085 74-75 0.0 7.791171667560054E-5 0.0 4.869073255712487 0.0012465874668096087 76-77 0.0 7.791171667560054E-5 0.0 5.393321719293434 0.0012465874668096087 78-79 0.0 7.791171667560054E-5 0.0 5.971329267380545 0.0012465874668096087 80-81 0.0 7.791171667560054E-5 0.0 6.564841247086102 0.0012465874668096087 82-83 0.0 7.791171667560054E-5 0.0 7.17496790037273 0.0012855433251474089 84-85 0.0 7.791171667560054E-5 0.0 7.816921489921341 0.0012855433251474089 86-87 0.0 7.791171667560054E-5 0.0 8.50778415961306 0.001324499183485209 88-89 0.0 7.791171667560054E-5 0.0 9.26341094379137 0.0013634550418230094 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1895 0.0 44.578438 1 GTATCAA 3200 0.0 38.560036 1 TCAACGC 3725 0.0 32.36538 4 CAACGCA 3885 0.0 31.274963 5 ATCAACG 4005 0.0 30.101461 3 TATCAAC 4045 0.0 29.803211 2 AACGCAG 4125 0.0 29.670994 6 GTACATG 6245 0.0 26.598042 1 ACGCAGA 4750 0.0 24.973778 7 TACATGG 6695 0.0 23.819717 2 CGCAGAG 4990 0.0 23.584293 8 ACATGGG 6710 0.0 22.069294 3 TAAGGCG 825 0.0 20.13548 5 GAGTACA 4800 0.0 19.47776 1 CATGGGG 5340 0.0 19.37709 4 GCAGAGT 6060 0.0 18.637003 9 GTATTAA 1560 0.0 18.55749 1 GTATAGG 710 0.0 18.0476 1 AGAGTAC 4960 0.0 17.652039 10-11 TAAGGTG 1160 0.0 17.593748 5 >>END_MODULE