##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921648_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2567008 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.54892310425211 31.0 31.0 34.0 27.0 34.0 2 30.708793661726023 33.0 31.0 34.0 27.0 34.0 3 30.76877789239457 33.0 31.0 34.0 27.0 34.0 4 34.247509162417884 37.0 35.0 37.0 31.0 37.0 5 33.93014513394582 37.0 35.0 37.0 30.0 37.0 6 33.88476857103679 37.0 35.0 37.0 30.0 37.0 7 33.73272346638577 37.0 35.0 37.0 29.0 37.0 8 33.665516040464226 37.0 35.0 37.0 28.0 37.0 9 35.16666562784378 39.0 35.0 39.0 28.0 39.0 10-11 35.025001090764036 39.0 35.0 39.0 28.0 39.0 12-13 34.92256977773346 39.0 35.0 39.0 27.0 39.0 14-15 36.05998228287563 40.0 36.0 41.0 27.0 41.0 16-17 36.00497524744761 40.0 36.0 41.0 27.0 41.0 18-19 35.94923369931064 40.0 36.5 41.0 27.0 41.0 20-21 35.87746220502624 40.0 36.0 41.0 27.0 41.0 22-23 35.77223016056047 40.0 36.0 41.0 27.0 41.0 24-25 35.671409477492865 40.0 36.0 41.0 26.5 41.0 26-27 35.527988225981375 40.0 36.0 41.0 25.0 41.0 28-29 35.38806930091375 40.0 36.0 41.0 25.0 41.0 30-31 35.21732246257121 39.5 35.5 41.0 24.0 41.0 32-33 35.16046814034082 39.5 35.0 41.0 24.0 41.0 34-35 35.28987424269811 40.0 36.0 41.0 24.5 41.0 36-37 35.277784292062975 40.0 35.5 41.0 24.0 41.0 38-39 35.16101566492976 40.0 35.0 41.0 24.0 41.0 40-41 35.06219594952567 40.0 35.0 41.0 23.0 41.0 42-43 34.92725441447787 40.0 35.0 41.0 22.5 41.0 44-45 34.7836263073586 39.0 35.0 41.0 21.5 41.0 46-47 34.613400698400625 39.0 35.0 41.0 20.5 41.0 48-49 34.45377556283424 39.0 35.0 41.0 18.5 41.0 50-51 34.28802656633715 39.0 34.5 41.0 18.0 41.0 52-53 34.1031292072327 39.0 34.0 41.0 15.5 41.0 54-55 33.88422903239881 38.5 34.0 40.0 13.5 41.0 56-57 33.64384178000225 38.0 34.0 40.0 12.5 41.0 58-59 33.39729950198831 38.0 33.5 40.0 8.5 41.0 60-61 33.11104815411561 37.0 33.0 40.0 7.5 41.0 62-63 32.8077072607487 37.0 33.0 40.0 6.5 41.0 64-65 32.47460039080517 36.0 33.0 39.5 2.0 41.0 66-67 32.12521912670315 36.0 32.0 39.0 2.0 41.0 68-69 31.769323079632006 35.0 32.0 39.0 2.0 40.0 70-71 31.38439186788666 35.0 32.0 38.0 2.0 40.0 72-73 31.032971264600654 35.0 31.0 37.0 2.0 39.5 74-75 30.639767776337276 35.0 31.0 37.0 2.0 39.0 76-77 28.037990921726774 32.0 27.5 34.5 2.0 36.0 78-79 29.56077522937209 34.0 30.0 35.0 2.0 37.0 80-81 29.75045773133547 35.0 31.0 35.0 2.0 37.0 82-83 29.58861133272666 35.0 31.0 35.0 2.0 37.0 84-85 29.38725979817749 34.0 30.5 35.0 2.0 36.0 86-87 29.172822016916193 34.0 30.0 35.0 2.0 36.0 88-89 28.906624171019335 34.0 30.0 35.0 2.0 35.5 90-91 28.701365948216754 34.0 30.0 35.0 2.0 35.0 92-93 28.52987758511076 34.0 30.0 35.0 2.0 35.0 94-95 28.407707143881126 34.0 29.5 35.0 2.0 35.0 96-97 28.17009335381892 34.0 29.0 35.0 2.0 35.0 98-99 27.93668562778145 34.0 29.0 35.0 2.0 35.0 100-101 26.80917628616662 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 93157.0 3 26567.0 4 13665.0 5 9259.0 6 7785.0 7 7629.0 8 7695.0 9 8098.0 10 8870.0 11 9430.0 12 9767.0 13 10163.0 14 10858.0 15 11583.0 16 11909.0 17 12499.0 18 11820.0 19 10831.0 20 10606.0 21 10588.0 22 11092.0 23 12530.0 24 14708.0 25 17510.0 26 21082.0 27 25455.0 28 30477.0 29 36650.0 30 44263.0 31 54683.0 32 69460.0 33 91201.0 34 129323.0 35 195408.0 36 342010.0 37 601870.0 38 518532.0 39 47975.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.303291566618455 20.939719880613037 13.640491090443582 27.116497462324922 2 14.6526456522857 22.058360641432582 35.973843437719616 27.315150268562107 3 16.992097179178007 25.293195236880088 28.985294948389146 28.72941263555276 4 13.001019140836226 17.521197038569962 34.224938719092684 35.25284510150113 5 14.100070445803487 37.2971955712656 34.378759966834366 14.223974016096555 6 34.2288943679228 35.89635510061135 16.145537303507616 13.72921322795824 7 28.91253163215697 31.673722871140253 20.9781971852055 18.43554831149728 8 26.637509505229435 35.36849125518892 19.462035178698315 18.531964060883332 9 26.463709083656212 15.097705264420885 18.93419805017986 39.50438760174304 10-11 25.851108687976566 25.314301681289912 27.76024296124015 21.07434666949337 12-13 26.14891343070894 22.651486569057322 27.508826932902064 23.690773067331673 14-15 23.35004082726638 24.26429110152588 24.48301694799043 27.902651123217314 16-17 23.765819974070983 27.38353367032748 25.330072987696184 23.52057336790536 18-19 23.81085574755003 26.66332161005262 26.534668083640963 22.99115455875639 20-21 24.308902518266432 25.9037578437743 26.34164185174624 23.44569778621303 22-23 24.185101877360726 25.6755919732233 26.156229353395084 23.983076796020892 24-25 23.973252050398898 25.946372040052196 26.080848055931426 23.99952785361748 26-27 23.805825704147505 26.086955674854007 26.175251071163597 23.931967549834894 28-29 24.003027824467992 26.204239071129525 26.043127798775117 23.749605305627362 30-31 24.141625717487287 26.038788340666002 25.846744092175005 23.972841849671706 32-33 23.966070209669024 26.042306265759464 25.742389485068834 24.249234039502678 34-35 24.21470417788773 26.067623439805594 25.87481433503942 23.842858047267253 36-37 24.34454404660501 25.870527666366243 25.89565491445146 23.889273372577293 38-39 24.181074655995356 25.967688057008015 25.912117514265155 23.93911977273148 40-41 24.263253432482358 25.836058561449647 25.98649232219043 23.914195683877566 42-43 24.192459101145612 25.812829606790892 25.74083305234029 24.253878239723203 44-45 24.105323277314625 25.840095589057437 25.88185931157646 24.17272182205148 46-47 24.268421314057147 25.87382238675288 25.744580763353426 24.11317553583655 48-49 23.99610715151175 26.001827986900206 25.763765029659986 24.23829983192806 50-51 24.078714292448293 25.981630189226113 25.813452573094153 24.12620294523144 52-53 24.317622215993502 25.802588001417238 25.759618911308173 24.120170871281086 54-55 23.858324235196495 25.776578327897177 25.932816305938932 24.432281130967397 56-57 23.926488162778718 25.876817318078267 25.863025813294584 24.333668705848435 58-59 23.975313230771146 25.72022232975589 25.86206157627215 24.44240286320081 60-61 23.844392763579393 25.776237264648127 26.031630949016126 24.347739022756354 62-63 23.902227097078367 25.81063586675408 25.993163728602557 24.293973307565 64-65 23.74421785356514 25.689049468614435 25.855535535051803 24.711197142768622 66-67 23.72687885238774 25.792607430300613 25.80589900237202 24.67461471493963 68-69 23.83269525103858 25.71209867170013 25.834791315325162 24.620414761936125 70-71 23.720566709611028 25.581688161585138 25.828634466843514 24.869110661960327 72-73 23.689914258002243 25.755157359927395 25.720007933950257 24.83492044812011 74-75 23.658680758772952 25.873944124621932 25.61567889698771 24.851696219617402 76-77 23.68157988314192 25.586759259006264 25.82919547166158 24.90246538619023 78-79 23.607535165763707 25.67470608701754 25.823916325315356 24.8938424219034 80-81 23.754006680431885 25.770005726195844 25.60997239030281 24.86601520306946 82-83 23.597268718913675 25.752067680782154 25.722414573430697 24.92824902687347 84-85 23.51915907793223 25.728080038818984 25.724299475203203 25.028461408045583 86-87 23.540872146769292 25.82983008814164 25.605962828991412 25.02333493609765 88-89 23.37689299985547 25.701459714306917 25.636930732903924 25.284716552933684 90-91 23.213727305914063 25.8176277461868 25.675395099907593 25.293249847991543 92-93 23.348190249853804 25.66225259122408 25.7233028069264 25.26625435199571 94-95 23.163171029079265 25.530481696138903 25.825713745295932 25.480633529485903 96-97 23.15542382604952 25.386609109140796 25.839835664952084 25.618131399857603 98-99 23.02565981447925 25.50161366004276 25.699296510836326 25.773430014641658 100-101 22.891019474254914 25.510843475342565 25.71614112869689 25.88199592170563 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 34.0 1 27.5 2 36.0 3 55.5 4 59.0 5 54.0 6 92.0 7 240.5 8 368.0 9 392.0 10 340.0 11 286.0 12 286.5 13 307.5 14 347.5 15 370.5 16 399.5 17 462.0 18 536.0 19 591.0 20 685.5 21 778.0 22 897.0 23 1096.0 24 1286.5 25 1601.5 26 2067.0 27 2847.0 28 4102.0 29 6082.5 30 9328.0 31 13855.0 32 20056.5 33 25525.5 34 30059.5 35 35756.5 36 43049.5 37 50495.5 38 57323.0 39 63726.5 40 69554.0 41 75646.5 42 81495.0 43 87163.0 44 93217.5 45 100287.0 46 105428.5 47 109116.0 48 112554.5 49 113526.0 50 112668.5 51 111762.0 52 110971.5 53 110155.0 54 108493.5 55 102796.5 56 94430.0 57 85150.5 58 76862.5 59 68007.5 60 56788.5 61 46991.0 62 38852.5 63 30102.0 64 21803.5 65 16129.0 66 12503.0 67 9896.0 68 7620.5 69 5729.0 70 4282.0 71 3124.5 72 2212.0 73 1669.0 74 1283.5 75 979.5 76 711.0 77 464.5 78 279.5 79 163.5 80 94.5 81 52.0 82 28.0 83 19.0 84 16.5 85 11.0 86 9.5 87 7.5 88 4.5 89 3.0 90 1.5 91 2.0 92 1.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12637280444782406 2 1.558234333512011E-4 3 0.007908039242573455 4 0.005453820167292038 5 0.019322105735548933 6 0.001986748775227814 7 0.0 8 0.0 9 7.791171667560054E-5 10-11 0.03903377005447588 12-13 2.5321307919570177E-4 14-15 0.0037397624004288257 16-17 0.0 18-19 0.0014024109001608098 20-21 1.558234333512011E-4 22-23 0.0 24-25 2.9216893753350204E-4 26-27 0.0022010059960857154 28-29 0.005784944963163341 30-31 0.016049813635173712 32-33 0.01153093406798888 34-35 0.00858976676348496 36-37 0.0028632555878283198 38-39 1.9477929168900136E-5 40-41 0.0037981961879355267 42-43 0.00851185504680936 44-45 0.00728474550916865 46-47 0.00430462234632693 48-49 0.009738964584450067 50-51 0.003077512808686221 52-53 0.0018114474127077127 54-55 0.003525505179570925 56-57 0.008200208180106958 58-59 0.0144136675849861 60-61 0.00726526757999975 62-63 0.02144520001495905 64-65 0.04002714444208978 66-67 0.057362501402410906 68-69 0.04857795534723694 70-71 0.06517315099913985 72-73 0.031982759695334026 74-75 0.025477131352921376 76-77 0.19855800994776798 78-79 0.0715034779790324 80-81 0.06252415263216944 82-83 0.02596407958214388 84-85 0.048811690497263735 86-87 0.06421873246986375 88-89 0.2694966279809023 90-91 0.27726832171929344 92-93 0.0423644959423578 94-95 0.008317075755120357 96-97 0.011706235430508981 98-99 6.817275209115047E-4 100-101 1.3634550418230095E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2567008.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.311854312991336 #Duplication Level Percentage of deduplicated Percentage of total 1 80.9513853365307 51.25182314861255 2 10.605415280166918 13.428970142934002 3 3.426526635911342 6.508192655172095 4 1.554761903728016 3.937394365608689 5 0.8638899378128886 2.7347236942634376 6 0.5616730955643556 2.1336339118738405 7 0.3938508757750341 1.7454800487679107 8 0.2833706794946821 1.4352578541392542 9 0.21171621440909788 1.206373151013016 >10 1.0950425773103587 11.939751229586431 >50 0.040609558287890646 1.7170025915021714 >100 0.010338854451338352 1.1703125069448574 >500 9.87165605151604E-4 0.44831518354360594 >1k 4.3188495225008537E-4 0.3427695160381268 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.895585833780027E-5 2 0.0 0.0 0.0 0.0 7.791171667560054E-5 3 0.0 0.0 0.0 0.0 7.791171667560054E-5 4 0.0 0.0 0.0 0.0 7.791171667560054E-5 5 0.0 0.0 0.0 0.0 7.791171667560054E-5 6 0.0 0.0 0.0 0.0 1.1686757501340082E-4 7 0.0 0.0 0.0 0.0 1.1686757501340082E-4 8 0.0 0.0 0.0 0.0 1.1686757501340082E-4 9 0.0 0.0 0.0 3.895585833780027E-5 1.1686757501340082E-4 10-11 0.0 0.0 0.0 3.895585833780027E-5 1.1686757501340082E-4 12-13 0.0 0.0 0.0 3.895585833780027E-5 1.7530136252010123E-4 14-15 0.0 0.0 0.0 5.843378750670041E-5 2.3373515002680163E-4 16-17 0.0 0.0 0.0 7.791171667560054E-5 2.726910083646019E-4 18-19 0.0 0.0 0.0 7.791171667560054E-5 3.116468667024022E-4 20-21 0.0 0.0 0.0 7.791171667560054E-5 3.116468667024022E-4 22-23 0.0 0.0 0.0 9.738964584450068E-5 3.311247958713023E-4 24-25 0.0 0.0 0.0 3.895585833780027E-4 3.5060272504020245E-4 26-27 0.0 0.0 0.0 6.427716625737045E-4 3.5060272504020245E-4 28-29 0.0 0.0 0.0 0.0026295204378015183 3.5060272504020245E-4 30-31 0.0 0.0 0.0 0.010810250688739574 3.5060272504020245E-4 32-33 0.0 0.0 0.0 0.03322934716214363 3.895585833780027E-4 34-35 0.0 0.0 0.0 0.06197877061544023 4.28514441715803E-4 36-37 0.0 0.0 0.0 0.11118001969608196 4.28514441715803E-4 38-39 0.0 0.0 0.0 0.19027989005098545 4.28514441715803E-4 40-41 0.0 0.0 0.0 0.2831311783991324 4.4799237088470313E-4 42-43 0.0 3.895585833780027E-5 0.0 0.38246861716052305 5.064261583914035E-4 44-45 0.0 3.895585833780027E-5 0.0 0.5113735524003042 5.453820167292038E-4 46-47 0.0 3.895585833780027E-5 0.0 0.6586851307046959 6.622495917426046E-4 48-49 0.0 3.895585833780027E-5 0.0 0.8136904910308032 7.401613084182052E-4 50-51 0.0 3.895585833780027E-5 0.0 0.9802462633540683 8.180730250938057E-4 52-53 0.0 3.895585833780027E-5 0.0 1.1534440095239282 8.765068126005062E-4 54-55 0.0 7.791171667560054E-5 0.0 1.3523526221967366 9.349406001072065E-4 56-57 0.0 7.791171667560054E-5 0.0 1.5877433962028946 9.349406001072065E-4 58-59 0.0 7.791171667560054E-5 0.0 1.833593818172752 9.349406001072065E-4 60-61 0.0 7.791171667560054E-5 0.0 2.094792848327703 9.349406001072065E-4 62-63 0.0 7.791171667560054E-5 0.0 2.3653607624128945 9.349406001072065E-4 64-65 0.0 7.791171667560054E-5 0.0 2.664853401313903 9.738964584450068E-4 66-67 0.0 1.1686757501340082E-4 0.0 3.013313554145527 0.001032330245951707 68-69 0.0 1.1686757501340082E-4 0.0 3.391010078659669 0.0010518081751206072 70-71 0.0 1.3634550418230095E-4 0.0 3.783801998279709 0.0010518081751206072 72-73 0.0 1.558234333512011E-4 0.0 4.197727471048006 0.0011686757501340082 74-75 0.0 1.558234333512011E-4 0.0 4.636604171081664 0.0011686757501340082 76-77 0.0 1.558234333512011E-4 0.0 5.14104358069784 0.0011686757501340082 78-79 0.0 1.558234333512011E-4 0.0 5.698540869370099 0.0011686757501340082 80-81 0.0 1.558234333512011E-4 0.0 6.271114075219088 0.0011686757501340082 82-83 0.0 1.558234333512011E-4 0.0 6.863827459828719 0.0011686757501340082 84-85 0.0 1.558234333512011E-4 0.0 7.484939665166607 0.0012076316084718083 86-87 0.0 1.558234333512011E-4 0.0 8.155623200239344 0.0012076316084718083 88-89 0.0 1.558234333512011E-4 0.0 8.884350964235406 0.0012076316084718083 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1885 0.0 49.923454 1 GTATCAA 3240 0.0 39.75347 1 TCAACGC 4060 0.0 31.56181 4 CAACGCA 4190 0.0 30.60224 5 TATCAAC 4240 0.0 30.111162 2 ATCAACG 4260 0.0 30.08121 3 AACGCAG 4510 0.0 28.322294 6 GTACATG 6215 0.0 25.159708 1 TACATGG 6475 0.0 23.749054 2 ACGCAGA 5640 0.0 22.310152 7 ACATGGG 6675 0.0 22.042027 3 CGCAGAG 5810 0.0 21.493906 8 CATGGGG 5625 0.0 19.82757 4 GCAGAGT 6475 0.0 17.893108 9 AGAGTAC 5440 0.0 17.544174 10-11 GTATTAA 1645 0.0 16.75764 1 CCCTATA 455 9.094947E-12 16.689745 2 ATGGGGG 2940 0.0 16.637703 5 GAGTACA 4910 0.0 16.45577 1 TAAGGTG 1265 0.0 15.767479 5 >>END_MODULE