##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921647_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2524877 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.604469445442295 31.0 31.0 34.0 27.0 34.0 2 30.673921937583494 33.0 31.0 34.0 27.0 34.0 3 30.73069222777981 33.0 31.0 34.0 27.0 34.0 4 34.19318604431028 37.0 35.0 37.0 30.0 37.0 5 34.193054156697535 37.0 35.0 37.0 30.0 37.0 6 34.236690737806235 37.0 35.0 37.0 30.0 37.0 7 34.14619801281409 37.0 35.0 37.0 30.0 37.0 8 34.122614289725796 37.0 35.0 37.0 30.0 37.0 9 35.70226272408517 39.0 37.0 39.0 30.0 39.0 10-11 35.61231596628271 39.0 37.0 39.0 30.0 39.0 12-13 35.502857564942765 39.0 37.0 39.0 30.0 39.0 14-15 36.67584539761739 40.0 37.0 41.0 30.0 41.0 16-17 36.6127526212168 40.0 37.0 41.0 30.0 41.0 18-19 36.57332832450848 40.0 37.0 41.0 30.0 41.0 20-21 36.4950108460729 40.0 37.0 41.0 29.0 41.0 22-23 36.39802572560961 40.0 37.0 41.0 29.0 41.0 24-25 36.288006504871326 40.0 37.0 41.0 28.0 41.0 26-27 36.14041792926943 40.0 36.0 41.0 27.5 41.0 28-29 36.00361958226084 40.0 36.0 41.0 27.0 41.0 30-31 35.858272303957776 40.0 36.0 41.0 27.0 41.0 32-33 35.67938477795156 40.0 36.0 41.0 26.5 41.0 34-35 35.50579691604779 39.5 35.0 41.0 25.5 41.0 36-37 35.46851173344286 39.5 35.0 41.0 25.5 41.0 38-39 35.65226009029351 40.0 35.5 41.0 26.5 41.0 40-41 35.71248381604332 40.0 36.0 41.0 26.0 41.0 42-43 35.550271557782814 40.0 35.0 41.0 25.0 41.0 44-45 35.425509440657905 40.0 35.0 41.0 25.0 41.0 46-47 35.2622430716427 40.0 35.0 41.0 24.0 41.0 48-49 35.08842668375529 40.0 35.0 41.0 24.0 41.0 50-51 33.37354671138436 37.0 32.5 39.5 20.5 40.0 52-53 33.49567365063724 37.5 33.5 39.5 21.0 40.0 54-55 34.40754876376156 39.0 34.0 40.5 22.0 41.0 56-57 34.41539667080812 39.0 34.0 41.0 22.0 41.0 58-59 34.21475224337661 38.0 34.0 41.0 22.0 41.0 60-61 33.95791795006252 38.0 34.0 40.0 20.5 41.0 62-63 33.653253207978054 37.0 34.0 40.0 20.0 41.0 64-65 33.3528595650402 37.0 34.0 40.0 18.5 41.0 66-67 33.00381860185665 36.0 33.0 39.0 17.5 41.0 68-69 32.63717480099031 36.0 33.0 39.0 14.0 41.0 70-71 32.223132651610356 35.0 33.0 39.0 9.5 40.5 72-73 31.851481280078197 35.0 32.5 37.5 7.5 40.0 74-75 31.447066530369597 35.0 32.0 37.0 4.0 39.0 76-77 31.065555470622925 35.0 32.0 36.5 2.0 39.0 78-79 30.719602578660265 35.0 32.0 36.0 2.0 38.0 80-81 30.402292666137797 35.0 31.5 35.5 2.0 37.0 82-83 30.089563174760592 35.0 31.0 35.0 2.0 37.0 84-85 29.82636243270464 35.0 31.0 35.0 2.0 36.0 86-87 29.59196962861953 35.0 31.0 35.0 2.0 36.0 88-89 29.361494639144798 35.0 31.0 35.0 2.0 36.0 90-91 29.124953611601676 35.0 31.0 35.0 2.0 35.0 92-93 28.920439688745233 34.5 30.0 35.0 2.0 35.0 94-95 28.683258233965457 34.0 30.0 35.0 2.0 35.0 96-97 28.42749825040982 34.0 30.0 35.0 2.0 35.0 98-99 28.145402132460312 34.0 29.5 35.0 2.0 35.0 100-101 27.057955892504864 33.0 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 77088.0 3 13692.0 4 9533.0 5 7379.0 6 6869.0 7 6940.0 8 7429.0 9 7894.0 10 8669.0 11 9023.0 12 9214.0 13 9206.0 14 9829.0 15 10441.0 16 10376.0 17 11127.0 18 10673.0 19 10248.0 20 10478.0 21 10992.0 22 12059.0 23 13874.0 24 16515.0 25 18912.0 26 22614.0 27 27138.0 28 31367.0 29 37203.0 30 44338.0 31 53810.0 32 66817.0 33 86882.0 34 121934.0 35 180276.0 36 306947.0 37 556197.0 38 574362.0 39 96524.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.47727187172472 17.711673835558628 12.349210563334239 25.461843729382416 2 16.576560723320654 19.32991457869378 38.52717703846118 25.56634765952438 3 19.558239600701167 22.92813595944552 29.10539417245325 28.40823026740007 4 13.702927212054439 15.067255332472 35.56031578697061 35.669501668502946 5 14.68088715289612 36.57147680742898 34.09409394334738 14.653542096327518 6 34.62383982356128 34.26968695437247 16.61516048381219 14.491312738254056 7 29.506556431577348 31.16570754956143 20.68020997059271 18.64752604826852 8 26.97905476278754 34.20776807019879 19.861492706639922 18.951684460373748 9 26.974426085100095 15.158110539738848 19.087178345646905 38.78028502951415 10-11 26.097610005594973 24.652185753118083 27.660023667232764 21.590180574054177 12-13 26.403182441744434 22.203350484936525 27.368420635640607 24.025046437678437 14-15 23.625340117692854 23.822214650294132 24.436967165456423 28.115478066556587 16-17 24.010635255042494 26.84155981627781 25.33104935097451 23.816755577705184 18-19 24.037995172770415 26.244154356478646 26.556199278589215 23.161651192161724 20-21 24.462960905284994 25.51773763523153 26.46177607890603 23.55752538057744 22-23 24.43671519480324 25.29349842355531 26.118249595686905 24.151536785954548 24-25 24.204220741596203 25.488608236854382 26.160812889436063 24.146358132113352 26-27 23.972502756597265 25.6872478731072 26.181781521419857 24.158467848875684 28-29 24.11962570030674 25.92911453976221 25.974329480061854 23.97693027986919 30-31 24.37783050752125 25.619505718400067 25.84938248963653 24.153281284442155 32-33 24.087146437210386 25.715958336320494 25.7794512045623 24.417444021906825 34-35 24.478238982052602 25.709085234399847 25.846345425142204 23.96633035840535 36-37 24.524325582086153 25.547965483268893 25.932818123759215 23.994890810885742 38-39 24.299057462059057 25.621549450466752 25.873017004656646 24.206376082817545 40-41 24.430431736367808 25.491088385017573 25.93115395720381 24.147325921410808 42-43 24.323772439630318 25.490078569340675 25.761666980536564 24.424482010492447 44-45 24.108404916263893 25.583490406111743 25.97552263524378 24.332582042380587 46-47 24.3590486318329 25.514372103358518 25.806714653037904 24.31986461177068 48-49 24.115184629774177 25.58826645671866 25.847473937386233 24.449074976120926 50-51 24.158386966217236 25.67291744371523 25.96793137107078 24.200764218996753 52-53 24.42400071268894 25.484581851788874 25.860310983961128 24.23110645156106 54-55 23.90673816296418 25.33106916487063 26.152554401448658 24.609638270716534 56-57 24.010881489107696 25.517314174526433 26.005100276402203 24.466704059963664 58-59 24.045902632115215 25.34270318278171 26.070264743355327 24.54112944174775 60-61 24.011079701382243 25.331015901224845 26.216205382850553 24.441699014542355 62-63 24.011656675664984 25.39104583506772 26.205398116980234 24.391899372287064 64-65 23.844332346274225 25.273970904076705 26.12815896115749 24.753537788491585 66-67 23.894729365530335 25.289823788406412 26.015315742859958 24.8001311032033 68-69 23.949139788210083 25.272087769595487 26.151731920316013 24.627040521878417 70-71 23.84796349714665 25.096267130550153 26.08759391388994 24.968175458413256 72-73 23.8451824612604 25.237615777366212 25.98309454535715 24.934107216016237 74-75 23.865601602397565 25.349358896145517 26.05997047484082 24.725069026616094 76-77 23.8873506444194 25.011550885693545 26.116170664658494 24.98492780522856 78-79 23.84016816383513 25.063975156388672 26.16835392026782 24.927502759508375 80-81 23.972689047698516 25.143685716479897 26.05605504101068 24.827570194810903 82-83 23.89749640532175 25.1622913389983 26.109865590981773 24.830346664698176 84-85 23.832616881179003 25.178524373130823 26.097437757557675 24.891420988132502 86-87 23.87331970168075 25.21364866734157 26.013071065259467 24.899960565718214 88-89 23.777481912894142 24.977262746207796 26.083931474094413 25.16132386680365 90-91 23.800520398481314 24.92691261127829 26.212964872209447 25.05960211803095 92-93 23.86911856518531 24.777348198087175 26.263129004487766 25.09040423223975 94-95 23.836734272660863 24.682144924648526 26.319025381371514 25.162095421319098 96-97 23.85602345757494 24.48398277041597 26.334815441686217 25.325178330322874 98-99 23.726835704148748 24.443270012580268 26.320704971359497 25.509189311911484 100-101 23.992689913978673 24.361945318047887 26.329666779001286 25.315697988972154 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 50.0 1 40.5 2 65.0 3 95.0 4 93.5 5 107.0 6 179.0 7 346.0 8 514.5 9 553.5 10 514.0 11 468.0 12 487.5 13 555.5 14 588.0 15 659.0 16 759.5 17 848.0 18 924.0 19 1023.5 20 1137.5 21 1206.0 22 1319.5 23 1519.0 24 1714.0 25 1947.0 26 2383.0 27 3127.0 28 4070.0 29 5707.0 30 8351.5 31 12063.0 32 17453.0 33 22040.5 34 25881.0 35 30974.0 36 37372.0 37 44065.5 38 51270.0 39 58555.0 40 65068.5 41 71166.0 42 77172.5 43 83912.5 44 89890.0 45 96381.0 46 101529.0 47 105233.0 48 109076.5 49 111288.0 50 111954.0 51 112178.5 52 112068.5 53 111576.5 54 110228.0 55 105458.5 56 97177.0 57 87361.5 58 78929.0 59 69583.0 60 58134.0 61 48532.5 62 40559.0 63 31615.0 64 22983.5 65 17171.0 66 13324.0 67 10577.5 68 8278.5 69 6279.0 70 4863.5 71 3596.5 72 2616.5 73 2006.0 74 1547.5 75 1229.5 76 935.5 77 638.0 78 407.0 79 298.5 80 233.0 81 152.5 82 111.5 83 98.0 84 70.5 85 51.5 86 49.5 87 45.0 88 40.0 89 34.5 90 28.0 91 24.0 92 21.5 93 16.5 94 16.0 95 17.5 96 11.5 97 7.5 98 9.0 99 7.5 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.049190515023108054 2 0.06875582454115586 3 0.06550814158471878 4 0.06562695925385673 5 0.062141640959143755 6 0.010337137215000968 7 0.01318876127431158 8 0.015406691098219835 9 0.006178518795172993 10-11 0.011465905071811418 12-13 0.02083269798885253 14-15 0.037011703936468986 16-17 0.024991316408680502 18-19 0.009525216475891697 20-21 0.01808008865382353 22-23 0.03338776502776175 24-25 0.03146687937669835 26-27 0.018951418227501775 28-29 0.010653984332702147 30-31 0.010436151939282587 32-33 0.007287483707127119 34-35 0.004356647868391212 36-37 5.742854008333871E-4 38-39 0.003881377191839444 40-41 0.001029753132528832 42-43 0.20814875338481834 44-45 0.18014738935797664 46-47 0.18682098177455772 48-49 0.19359358891542044 50-51 0.1844446283917989 52-53 0.19183112682320763 54-55 0.18798935552108081 56-57 0.1908013736906788 58-59 0.19888097519205886 60-61 0.20333663778473168 62-63 0.1891577292676039 64-65 0.18870226153590847 66-67 0.1871378288922589 68-69 0.18204847206418373 70-71 0.17491941191590718 72-73 0.1855337903588967 74-75 0.18430600777780462 76-77 0.1785235478797581 78-79 0.19618777469159887 80-81 0.20707939436257686 82-83 0.20515850871151348 84-85 0.20012856071800725 86-87 0.21765416691585374 88-89 0.21123801278240484 90-91 0.2163075666656237 92-93 0.21228756885978997 94-95 0.21587190187878458 96-97 0.22201081478424495 98-99 0.2160699313273478 100-101 0.22250588840565305 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2524877.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.24379910264275 #Duplication Level Percentage of deduplicated Percentage of total 1 79.07898600583367 48.43097532181975 2 11.581240671032734 14.185583540321685 3 3.7436759522347254 6.878308137721752 4 1.7679845242145058 4.331123560702984 5 0.9825576443258193 3.0087781487928194 6 0.6022818406018685 2.213161682939444 7 0.43179139774670366 1.8511181932493903 8 0.3218924538997013 1.5771133423432 9 0.22764441393821064 1.2547627878663559 >10 1.2088052516710097 12.621016610870758 >50 0.04087916501579739 1.6568994037345413 >100 0.01083744195516162 1.21666330350516 >500 9.70389225123847E-4 0.41315960378966343 >1k 4.528483050490149E-4 0.36133636234250666 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 3.9605889712647385E-5 0.0 8 0.0 0.0 0.0 3.9605889712647385E-5 0.0 9 0.0 0.0 0.0 3.9605889712647385E-5 3.9605889712647385E-5 10-11 0.0 0.0 0.0 3.9605889712647385E-5 3.9605889712647385E-5 12-13 0.0 0.0 0.0 3.9605889712647385E-5 5.940883456897108E-5 14-15 0.0 0.0 0.0 3.9605889712647385E-5 9.901472428161847E-5 16-17 0.0 0.0 0.0 5.940883456897108E-5 1.1881766913794217E-4 18-19 0.0 0.0 0.0 7.921177942529477E-5 1.1881766913794217E-4 20-21 0.0 0.0 0.0 7.921177942529477E-5 1.1881766913794217E-4 22-23 0.0 0.0 0.0 7.921177942529477E-5 1.3862061399426586E-4 24-25 0.0 0.0 0.0 2.1783239341956065E-4 1.5842355885058954E-4 26-27 0.0 0.0 0.0 6.53497180258682E-4 1.5842355885058954E-4 28-29 0.0 0.0 0.0 0.003425909460143999 1.5842355885058954E-4 30-31 0.0 0.0 0.0 0.015980976499053223 1.7822650370691323E-4 32-33 0.0 0.0 0.0 0.048794456125981586 1.9802944856323694E-4 34-35 0.0 0.0 0.0 0.09358871739098579 1.9802944856323694E-4 36-37 0.0 0.0 0.0 0.1617900594761646 1.9802944856323694E-4 38-39 0.0 0.0 0.0 0.27551837178603156 1.9802944856323694E-4 40-41 0.0 0.0 0.0 0.39827682695038213 1.9802944856323694E-4 42-43 0.0 0.0 0.0 0.5328378372491016 1.9802944856323694E-4 44-45 0.0 0.0 0.0 0.7033807983517613 2.1783239341956065E-4 46-47 1.9802944856323693E-5 0.0 0.0 0.8992319229808026 2.3763533827588434E-4 48-49 3.9605889712647385E-5 0.0 0.0 1.1019150635852757 2.3763533827588434E-4 50-51 3.9605889712647385E-5 0.0 0.0 1.3089350491132836 2.3763533827588434E-4 52-53 3.9605889712647385E-5 0.0 0.0 1.5209255738002287 2.772412279885317E-4 54-55 3.9605889712647385E-5 0.0 0.0 1.7779281921455976 2.772412279885317E-4 56-57 3.9605889712647385E-5 0.0 0.0 2.070259264114648 3.168471177011791E-4 58-59 3.9605889712647385E-5 0.0 0.0 2.3755810679094465 3.564530074138265E-4 60-61 3.9605889712647385E-5 0.0 0.0 2.697022468817293 3.960588971264739E-4 62-63 3.9605889712647385E-5 0.0 0.0 3.027414800800197 4.3566478683912125E-4 64-65 3.9605889712647385E-5 0.0 0.0 3.3917097743771283 4.752706765517687E-4 66-67 3.9605889712647385E-5 0.0 0.0 3.8235327899141227 4.752706765517687E-4 68-69 3.9605889712647385E-5 0.0 0.0 4.277752936083619 4.752706765517687E-4 70-71 3.9605889712647385E-5 0.0 0.0 4.744191499229467 4.950736214080924E-4 72-73 3.9605889712647385E-5 0.0 0.0 5.233839113746927 5.742854008333871E-4 74-75 3.9605889712647385E-5 0.0 0.0 5.756953705071574 5.940883456897108E-4 76-77 3.9605889712647385E-5 0.0 0.0 6.351022247816428 5.940883456897108E-4 78-79 3.9605889712647385E-5 0.0 0.0 6.996934900195138 5.940883456897108E-4 80-81 3.9605889712647385E-5 0.0 0.0 7.656372963910718 6.138912905460345E-4 82-83 3.9605889712647385E-5 0.0 0.0 8.335475351868626 7.525119045403004E-4 84-85 3.9605889712647385E-5 0.0 0.0 9.047767475405733 7.525119045403004E-4 86-87 3.9605889712647385E-5 0.0 0.0 9.810161049429338 7.723148493966241E-4 88-89 3.9605889712647385E-5 0.0 0.0 10.638676656328208 7.921177942529478E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1855 0.0 51.4358 1 GTATCAA 3175 0.0 38.573524 1 TCAACGC 3925 0.0 30.11551 4 CAACGCA 3990 0.0 29.742706 5 ATCAACG 4070 0.0 29.158081 3 TATCAAC 4160 0.0 28.414276 2 GTACATG 6150 0.0 28.404428 1 AACGCAG 4295 0.0 27.943327 6 TACATGG 6400 0.0 26.776745 2 ACATGGG 6795 0.0 24.520594 3 ACGCAGA 5130 0.0 22.842937 7 GTATAGA 740 0.0 22.45172 1 CATGGGG 5760 0.0 22.004896 4 GTATTAG 645 0.0 20.606852 1 CGCAGAG 5625 0.0 20.411045 8 GAGTACA 4760 0.0 19.945107 1 TAAGGCG 840 0.0 18.648676 5 GTATTAA 1295 0.0 18.327936 1 TAAGGTG 1145 0.0 18.241499 5 CATACCG 210 1.9682044E-5 18.083565 5 >>END_MODULE