##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921647_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2524877 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.96102820058165 33.0 31.0 34.0 28.0 34.0 2 31.102480239631475 33.0 31.0 34.0 28.0 34.0 3 31.171649945720127 34.0 31.0 34.0 27.0 34.0 4 34.65366233681878 37.0 35.0 37.0 32.0 37.0 5 34.35344810856133 37.0 35.0 37.0 30.0 37.0 6 34.3157282513168 37.0 35.0 37.0 30.0 37.0 7 34.17977945064255 37.0 35.0 37.0 30.0 37.0 8 34.11662627526014 37.0 35.0 37.0 30.0 37.0 9 35.6573678638603 39.0 37.0 39.0 30.0 39.0 10-11 35.53612413594801 39.0 37.0 39.0 30.0 39.0 12-13 35.44014361887727 39.0 37.0 39.0 30.0 39.0 14-15 36.62162196415905 40.0 37.0 41.0 30.0 41.0 16-17 36.57284671688957 40.0 37.0 41.0 30.0 41.0 18-19 36.5268422976644 40.0 37.0 41.0 29.0 41.0 20-21 36.45690938608099 40.0 37.0 41.0 29.0 41.0 22-23 36.35774138700618 40.0 37.0 41.0 28.5 41.0 24-25 36.263328273020825 40.0 37.0 41.0 28.0 41.0 26-27 36.123891777698475 40.0 36.0 41.0 27.0 41.0 28-29 35.989469982102094 40.0 36.0 41.0 27.0 41.0 30-31 35.82198538780305 40.0 36.0 41.0 27.0 41.0 32-33 35.763506301495084 40.0 36.0 41.0 27.0 41.0 34-35 35.892079297328145 40.0 36.0 41.0 27.0 41.0 36-37 35.880525269151725 40.0 36.0 41.0 27.0 41.0 38-39 35.76203137816218 40.0 36.0 41.0 26.0 41.0 40-41 35.6694282533367 40.0 36.0 41.0 26.0 41.0 42-43 35.53498051588255 40.0 35.0 41.0 25.5 41.0 44-45 35.39007127871972 40.0 35.0 41.0 25.0 41.0 46-47 35.219989132143866 40.0 35.0 41.0 24.0 41.0 48-49 35.06613213237714 39.0 35.0 41.0 24.0 41.0 50-51 34.894506742308636 39.0 35.0 41.0 23.5 41.0 52-53 34.70766377926529 39.0 35.0 41.0 23.0 41.0 54-55 34.48153335786258 39.0 34.5 41.0 22.5 41.0 56-57 34.23881539575987 38.0 34.0 40.0 22.0 41.0 58-59 33.98691956083405 38.0 34.0 40.0 21.0 41.0 60-61 33.70125237783861 37.5 34.0 40.0 20.0 41.0 62-63 33.39053130112873 37.0 33.5 40.0 18.5 41.0 64-65 33.04748251102925 36.5 33.0 39.5 18.0 41.0 66-67 32.69198816417592 36.0 33.0 39.0 14.0 41.0 68-69 32.32942674039171 35.0 33.0 39.0 12.5 40.5 70-71 31.936890985184625 35.0 32.0 38.0 8.0 40.0 72-73 31.579115537113292 35.0 32.0 37.0 7.0 39.5 74-75 31.185372594387765 35.0 32.0 37.0 2.0 39.0 76-77 28.530393955824383 32.0 27.5 34.5 2.0 36.0 78-79 30.082003796620587 34.5 30.5 35.0 2.0 37.0 80-81 30.271012409713425 35.0 31.0 35.0 2.0 37.0 82-83 30.106550140858346 35.0 31.0 35.0 2.0 36.5 84-85 29.91508556654443 35.0 31.0 35.0 2.0 36.0 86-87 29.709754574183215 34.5 31.0 35.0 2.0 36.0 88-89 29.440679486565088 34.0 31.0 35.0 2.0 35.5 90-91 29.236961444062423 34.0 31.0 35.0 2.0 35.0 92-93 29.070787210624516 34.0 30.0 35.0 2.0 35.0 94-95 28.959490105854663 34.0 30.0 35.0 2.0 35.0 96-97 28.736058429776975 34.0 30.0 35.0 2.0 35.0 98-99 28.516612096351622 34.0 30.0 35.0 2.0 35.0 100-101 27.38066388976572 33.0 27.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 67702.0 3 21746.0 4 11500.0 5 8119.0 6 6922.0 7 6933.0 8 7075.0 9 7613.0 10 8142.0 11 8632.0 12 9056.0 13 9694.0 14 10231.0 15 10822.0 16 11610.0 17 12141.0 18 11583.0 19 10422.0 20 10288.0 21 10324.0 22 10770.0 23 12153.0 24 14135.0 25 17153.0 26 20184.0 27 24469.0 28 29250.0 29 34910.0 30 42591.0 31 53387.0 32 66539.0 33 87505.0 34 124462.0 35 186412.0 36 327431.0 37 598026.0 38 557475.0 39 57470.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.51800491279258 19.59659253847316 13.10124295318092 26.78415959555334 2 15.388706987406486 21.08052252966587 36.51964793448854 27.011122548439108 3 17.915067274485207 24.315025763895846 28.864911154267688 28.90499580735126 4 13.386382225320482 16.512873730302232 34.21229722958829 35.88844681478899 5 14.39814158233299 37.06424518816716 34.04451455414535 14.493098675354494 6 34.632738466315644 34.99494221770881 16.24296683092907 14.12935248504647 7 29.385550266409016 31.424738710044092 20.625836426883367 18.56387459666352 8 26.936797317255458 34.82601330678683 19.48288966155579 18.754299714401927 9 26.787324689479924 15.113488696677106 18.886662597821598 39.212524016021376 10-11 26.03675191712998 25.012842943236073 27.51967847966496 21.430726659968986 12-13 26.35309414878902 22.406772941424123 27.289320382966174 23.950812526820684 14-15 23.532468550952498 23.99716646166356 24.3808071148191 28.08955787256484 16-17 24.024556443739638 27.070823648043053 25.19285097848331 23.711768929734003 18-19 23.971438959648104 26.469440811648116 26.448092907346926 23.111027321356854 20-21 24.409865773313918 25.701417161791067 26.333865439831467 23.554851625063545 22-23 24.28448989792374 25.443100792632674 26.12515381937417 24.147255490069416 24-25 24.139819835804985 25.61512731282305 26.062577244274788 24.182475607097174 26-27 23.91246616324855 25.853882267809436 26.15034063006413 24.08331093887789 28-29 24.05700125339068 26.075298895752713 25.923204719355546 23.94449513150106 30-31 24.337919810622875 25.802098763451497 25.714120475589787 24.14586095033584 32-33 24.105603012905778 25.86746209111442 25.63221746284371 24.3947174331361 34-35 24.35863589975357 25.888359858252976 25.799297602409215 23.95370663958424 36-37 24.41412438687436 25.718759109747907 25.88109085666485 23.986025646712886 38-39 24.256013263220346 25.78872158921009 25.82169349239587 24.133571655173697 40-41 24.345899980394524 25.67614132576575 25.871958428472695 24.10600026536703 42-43 24.31095617703467 25.60641877038395 25.661020225313685 24.421604827267693 44-45 24.0951340569277 25.692386178061565 25.820796914973638 24.391682850037093 46-47 24.265023611687063 25.69653783711956 25.703944337967744 24.334494213225636 48-49 24.017717874964053 25.78237576059084 25.76774025402011 24.432166110424998 50-51 24.135047936052523 25.79005569501533 25.81007690839196 24.26481946054019 52-53 24.368308079782906 25.651386342784342 25.729787769575452 24.250517807857292 54-55 23.84756204307864 25.539294939990764 25.9985828456997 24.614560171230895 56-57 23.970026252873637 25.639943501661204 25.797211206507292 24.59281903895787 58-59 23.964812118650563 25.51289747635725 25.892278705671266 24.630011699320917 60-61 23.870471354432272 25.559231470763272 26.022971114304017 24.54732606050044 62-63 23.883845673448022 25.61526271035873 25.966561273136413 24.53433034305683 64-65 23.744008368225707 25.459890860427542 25.832161999657266 24.963938771689484 66-67 23.77142146085209 25.535546428554447 25.73779307633657 24.955239034256902 68-69 23.83820892565258 25.495289514091834 25.782099162910495 24.88440239734509 70-71 23.69783265389917 25.32793960632187 25.788767181704976 25.185460558073984 72-73 23.697595950323556 25.495418381583434 25.6704146722722 25.13657099582081 74-75 23.672307811767094 25.590188860435337 25.631984413230057 25.105518914567515 76-77 23.667336311842043 25.221041451386956 25.79669286703855 25.314929369732447 78-79 23.576052443769548 25.325994820549504 25.799684444743047 25.2982682909379 80-81 23.80163710539728 25.344835239220775 25.607890508767717 25.245637146614225 82-83 23.62045479170616 25.38569980593932 25.668362444415788 25.32548295793873 84-85 23.547237564025448 25.352095374634555 25.678929278183677 25.421737783156324 86-87 23.553226222592656 25.432241735934337 25.556132868682134 25.458399172790873 88-89 23.3951217962212 25.21378384497146 25.606300119552138 25.784794239255206 90-91 23.29197086090611 25.18366844350527 25.71393957689527 25.81042111869335 92-93 23.369554341914565 25.007434734325884 25.805908360088804 25.817102563670748 94-95 23.291943917526424 24.875695099378564 25.834743105846027 25.997617877248985 96-97 23.194597497993687 24.752053250223604 25.8911941768263 26.162155074956406 98-99 23.03234923565787 24.706150976829917 25.829662819706982 26.43183696780523 100-101 22.97810327677543 24.752606613672633 25.784598092064343 26.484692017487593 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 32.5 2 54.0 3 91.0 4 86.5 5 92.5 6 150.0 7 309.5 8 446.0 9 439.5 10 373.5 11 333.5 12 347.5 13 355.0 14 386.5 15 431.0 16 443.0 17 503.5 18 606.0 19 678.5 20 762.5 21 851.0 22 935.5 23 1125.5 24 1409.0 25 1713.5 26 2210.5 27 2960.0 28 4016.0 29 5779.5 30 8495.5 31 12261.0 32 17621.5 33 22243.5 34 26061.5 35 31098.0 36 37518.5 37 44197.5 38 51111.0 39 58012.0 40 64482.0 41 70870.5 42 76900.5 43 83434.5 44 89891.5 45 96599.5 46 101605.0 47 105610.0 48 109909.5 49 112252.5 50 112650.0 51 113129.5 52 113223.0 53 112912.0 54 112028.0 55 106859.5 56 98091.5 57 88153.5 58 79459.0 59 69739.0 60 58125.0 61 48361.0 62 40122.0 63 31137.5 64 22687.5 65 16774.0 66 12757.0 67 10237.0 68 8012.0 69 5998.5 70 4524.0 71 3329.5 72 2393.5 73 1736.0 74 1333.5 75 1075.5 76 750.5 77 445.0 78 270.5 79 164.5 80 97.0 81 60.0 82 34.0 83 21.5 84 19.0 85 17.0 86 10.0 87 6.5 88 4.0 89 1.5 90 2.0 91 2.0 92 1.0 93 1.0 94 0.5 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.14670021549564594 2 2.376353382758843E-4 3 0.008713295736782424 4 0.006416154133448877 5 0.022931810143622836 6 0.002178323934195606 7 0.0 8 0.0 9 0.0 10-11 0.04425958175388346 12-13 2.57438283132208E-4 14-15 0.004693297930948716 16-17 0.0 18-19 0.0015446296987932481 20-21 2.57438283132208E-4 22-23 0.0 24-25 5.346795111207397E-4 26-27 0.002792215224741641 28-29 0.004970539158937247 30-31 0.015466099932788805 32-33 0.010733196112127443 34-35 0.009446004696466403 36-37 0.004317041978678566 38-39 0.0 40-41 0.002851624059310612 42-43 0.008673689847069777 44-45 0.006574577692299466 46-47 0.0026932005004600226 48-49 0.00772314849396624 50-51 0.002178323934195606 52-53 0.002000097430488693 54-55 0.003920983081552092 56-57 0.007960783832242125 58-59 0.014713588028248504 60-61 0.0073072866519834434 62-63 0.020931712713134144 64-65 0.0413683518048602 66-67 0.0583394755467296 68-69 0.049586573920234536 70-71 0.06729040662178791 72-73 0.032615450178365125 74-75 0.02713003445316346 76-77 0.21321830726803723 78-79 0.08010291194382935 80-81 0.06507247679787967 82-83 0.026397325493479482 84-85 0.05033908582477483 86-87 0.06709237717322467 88-89 0.2830632937762909 90-91 0.289004177233188 92-93 0.049487559195952914 94-95 0.009426201751610078 96-97 0.013584820171438054 98-99 0.001029753132528832 100-101 5.940883456897108E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2524877.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.588776875811725 #Duplication Level Percentage of deduplicated Percentage of total 1 79.30555277833655 48.8433199507788 2 11.40802124908041 14.052121506082646 3 3.7485110327236915 6.92598628832814 4 1.7098446760326662 4.212289689778819 5 0.955878989116222 2.943570889047773 6 0.6337058830202681 2.341750214053472 7 0.421762064765585 1.8183066791070492 8 0.32734347660987806 1.6128547474142618 9 0.2474529994221768 1.3716294811796532 >10 1.1925289649472874 12.458880053231923 >50 0.037892412210278434 1.5445048052380104 >100 0.010086887496457558 1.1313152927404855 >500 0.001096180275277503 0.4877969638536183 >1k 3.2240596331401303E-4 0.25567343916540325 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.9605889712647385E-5 2 0.0 0.0 0.0 0.0 3.9605889712647385E-5 3 0.0 0.0 0.0 0.0 3.9605889712647385E-5 4 0.0 0.0 0.0 0.0 3.9605889712647385E-5 5 0.0 0.0 0.0 0.0 3.9605889712647385E-5 6 0.0 0.0 0.0 0.0 7.921177942529477E-5 7 0.0 0.0 3.9605889712647385E-5 3.9605889712647385E-5 7.921177942529477E-5 8 0.0 0.0 3.9605889712647385E-5 3.9605889712647385E-5 1.1881766913794217E-4 9 0.0 0.0 3.9605889712647385E-5 3.9605889712647385E-5 1.1881766913794217E-4 10-11 0.0 0.0 3.9605889712647385E-5 3.9605889712647385E-5 1.1881766913794217E-4 12-13 0.0 0.0 3.9605889712647385E-5 3.9605889712647385E-5 1.5842355885058954E-4 14-15 0.0 0.0 3.9605889712647385E-5 3.9605889712647385E-5 2.1783239341956065E-4 16-17 0.0 0.0 3.9605889712647385E-5 5.940883456897108E-5 2.772412279885317E-4 18-19 0.0 0.0 3.9605889712647385E-5 7.921177942529477E-5 3.564530074138265E-4 20-21 0.0 0.0 3.9605889712647385E-5 7.921177942529477E-5 3.564530074138265E-4 22-23 0.0 0.0 3.9605889712647385E-5 7.921177942529477E-5 3.762559522701502E-4 24-25 0.0 0.0 3.9605889712647385E-5 2.57438283132208E-4 3.960588971264739E-4 26-27 0.0 0.0 3.9605889712647385E-5 6.53497180258682E-4 3.960588971264739E-4 28-29 0.0 0.0 3.9605889712647385E-5 0.0032476829564370858 3.960588971264739E-4 30-31 0.0 0.0 3.9605889712647385E-5 0.015683932326208364 3.960588971264739E-4 32-33 0.0 0.0 3.9605889712647385E-5 0.048695441401699964 4.3566478683912125E-4 34-35 0.0 0.0 3.9605889712647385E-5 0.09345009677699151 4.3566478683912125E-4 36-37 1.9802944856323693E-5 0.0 3.9605889712647385E-5 0.16119597113047487 4.3566478683912125E-4 38-39 3.9605889712647385E-5 0.0 3.9605889712647385E-5 0.2734390625761176 4.3566478683912125E-4 40-41 3.9605889712647385E-5 0.0 3.9605889712647385E-5 0.39393998202684727 4.3566478683912125E-4 42-43 3.9605889712647385E-5 0.0 3.9605889712647385E-5 0.5277484804210265 4.3566478683912125E-4 44-45 3.9605889712647385E-5 0.0 3.9605889712647385E-5 0.6966676000454676 4.55467731695445E-4 46-47 5.940883456897108E-5 0.0 3.9605889712647385E-5 0.8903998095748823 4.752706765517687E-4 48-49 7.921177942529477E-5 0.0 3.9605889712647385E-5 1.0902115231751883 5.14876566264416E-4 50-51 7.921177942529477E-5 0.0 3.9605889712647385E-5 1.2949343670998625 5.14876566264416E-4 52-53 7.921177942529477E-5 0.0 3.9605889712647385E-5 1.5037762235546523 5.544824559770634E-4 54-55 7.921177942529477E-5 0.0 3.9605889712647385E-5 1.7572737206604518 6.138912905460345E-4 56-57 7.921177942529477E-5 0.0 3.9605889712647385E-5 2.0449114946985536 6.336942354023582E-4 58-59 7.921177942529477E-5 0.0 3.9605889712647385E-5 2.34496571516157 6.336942354023582E-4 60-61 7.921177942529477E-5 0.0 3.9605889712647385E-5 2.6622484976495886 6.336942354023582E-4 62-63 7.921177942529477E-5 0.0 3.9605889712647385E-5 2.9880069405361134 7.12906014827653E-4 64-65 7.921177942529477E-5 3.9605889712647385E-5 3.9605889712647385E-5 3.3472521631746814 7.12906014827653E-4 66-67 7.921177942529477E-5 3.9605889712647385E-5 3.9605889712647385E-5 3.771569862611129 7.12906014827653E-4 68-69 7.921177942529477E-5 3.9605889712647385E-5 3.9605889712647385E-5 4.218462919183786 7.12906014827653E-4 70-71 7.921177942529477E-5 3.9605889712647385E-5 3.9605889712647385E-5 4.678346707582191 7.12906014827653E-4 72-73 7.921177942529477E-5 3.9605889712647385E-5 3.9605889712647385E-5 5.160370188329966 7.12906014827653E-4 74-75 7.921177942529477E-5 3.9605889712647385E-5 3.9605889712647385E-5 5.679801431911336 7.12906014827653E-4 76-77 7.921177942529477E-5 3.9605889712647385E-5 3.9605889712647385E-5 6.268265741261851 7.12906014827653E-4 78-79 7.921177942529477E-5 7.921177942529477E-5 3.9605889712647385E-5 6.9095247015993255 7.12906014827653E-4 80-81 7.921177942529477E-5 7.921177942529477E-5 3.9605889712647385E-5 7.565418038185623 7.12906014827653E-4 82-83 7.921177942529477E-5 7.921177942529477E-5 3.9605889712647385E-5 8.240619246006835 7.327089596839767E-4 84-85 7.921177942529477E-5 7.921177942529477E-5 3.9605889712647385E-5 8.948970583517532 7.525119045403004E-4 86-87 7.921177942529477E-5 7.921177942529477E-5 3.9605889712647385E-5 9.706472830161628 7.525119045403004E-4 88-89 7.921177942529477E-5 7.921177942529477E-5 3.9605889712647385E-5 10.529384203666158 7.525119045403004E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1685 0.0 51.05671 1 GTATCAA 3290 0.0 40.162716 1 TCAACGC 4185 0.0 31.41698 4 ATCAACG 4345 0.0 30.370531 3 TATCAAC 4325 0.0 30.29147 2 CAACGCA 4355 0.0 30.104273 5 AACGCAG 4625 0.0 28.341213 6 GTACATG 6350 0.0 27.54535 1 TACATGG 6700 0.0 25.64668 2 ACATGGG 7150 0.0 24.231718 3 ACGCAGA 5660 0.0 22.822592 7 CATGGGG 6040 0.0 22.475494 4 CGCAGAG 5870 0.0 21.844301 8 GTATAGG 720 0.0 19.14431 1 TATAGGG 325 4.9294613E-10 18.987043 2 GTATTAC 470 0.0 18.203245 1 GCAGAGT 6665 0.0 18.098646 9 ATGGGGG 3475 0.0 17.77034 5 AGAGTAC 5630 0.0 17.334684 10-11 TAAGGTG 1190 0.0 17.164402 5 >>END_MODULE