##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921646_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2577242 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.918649859035355 33.0 31.0 34.0 28.0 34.0 2 30.984897033340292 33.0 31.0 34.0 28.0 34.0 3 31.049823415884113 34.0 31.0 34.0 27.0 34.0 4 34.46487407856926 37.0 35.0 37.0 32.0 37.0 5 34.45772379931726 37.0 35.0 37.0 32.0 37.0 6 34.50463518753769 37.0 35.0 37.0 32.0 37.0 7 34.43287475526163 37.0 35.0 37.0 32.0 37.0 8 34.40494101834442 37.0 35.0 37.0 31.0 37.0 9 36.03807131809896 39.0 37.0 39.0 32.0 39.0 10-11 35.94931694423729 39.0 37.0 39.0 31.0 39.0 12-13 35.853755875466874 39.0 37.0 39.0 31.0 39.0 14-15 37.107956489922174 40.0 38.0 41.0 31.0 41.0 16-17 37.05001955578871 40.0 38.0 41.0 31.0 41.0 18-19 36.99953108788387 40.0 38.0 41.0 31.0 41.0 20-21 36.926102205380786 40.0 38.0 41.0 30.5 41.0 22-23 36.83181885907493 40.0 38.0 41.0 30.0 41.0 24-25 36.7344504318958 40.0 38.0 41.0 30.0 41.0 26-27 36.599003508401616 40.0 37.0 41.0 30.0 41.0 28-29 36.472415667601254 40.0 37.0 41.0 30.0 41.0 30-31 36.34787575245165 40.0 37.0 41.0 29.5 41.0 32-33 36.19581475080726 40.0 37.0 41.0 29.0 41.0 34-35 36.039314701529776 40.0 36.0 41.0 28.0 41.0 36-37 36.02751022216773 40.0 36.5 41.0 28.0 41.0 38-39 36.22882018840295 40.0 37.0 41.0 29.0 41.0 40-41 36.29939699104702 40.0 37.0 41.0 29.0 41.0 42-43 36.165844922595554 40.0 37.0 41.0 28.0 41.0 44-45 36.05634705627178 40.0 37.0 41.0 28.0 41.0 46-47 35.91253479494746 40.0 36.0 41.0 27.5 41.0 48-49 35.75783686592101 40.0 36.0 41.0 27.0 41.0 50-51 34.07720384814465 38.0 33.5 39.5 24.5 40.0 52-53 34.207306686760504 38.5 34.0 39.5 23.5 40.0 54-55 35.09896121512842 39.0 35.0 40.5 26.0 41.0 56-57 35.09227965398671 39.0 35.0 41.0 26.0 41.0 58-59 34.88248852843466 39.0 35.0 41.0 26.0 41.0 60-61 34.618253155893 38.0 35.0 41.0 25.5 41.0 62-63 34.313175867846326 37.5 34.5 40.0 25.0 41.0 64-65 33.99996721301298 37.0 34.0 40.0 24.0 41.0 66-67 33.64456830208417 36.5 34.0 39.5 23.0 41.0 68-69 33.27375911924453 36.0 34.0 39.0 22.5 41.0 70-71 32.864272738066504 35.5 34.0 39.0 22.0 40.5 72-73 32.4979157952571 35.0 33.5 37.5 20.5 39.5 74-75 32.1044963957595 35.0 33.0 37.0 20.0 39.0 76-77 31.747175274964476 35.0 33.0 36.5 18.0 39.0 78-79 31.43229021566465 35.0 33.0 36.0 17.5 37.5 80-81 31.139083368965743 35.0 33.0 35.5 14.0 37.0 82-83 30.866339288277935 35.0 32.5 35.0 9.0 37.0 84-85 30.637517741834102 35.0 32.0 35.0 7.0 36.0 86-87 30.437531865459277 35.0 32.0 35.0 2.0 36.0 88-89 30.25333573641901 35.0 32.0 35.0 2.0 36.0 90-91 30.061516923905476 35.0 32.0 35.0 2.0 35.0 92-93 29.904736536188686 35.0 32.0 35.0 2.0 35.0 94-95 29.710860485744064 35.0 32.0 35.0 2.0 35.0 96-97 29.51577015274468 35.0 31.0 35.0 2.0 35.0 98-99 29.288051335497407 35.0 31.0 35.0 2.0 35.0 100-101 28.264935539619486 34.0 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 77600.0 3 13336.0 4 8954.0 5 6762.0 6 6122.0 7 6075.0 8 6305.0 9 6833.0 10 7095.0 11 7430.0 12 7380.0 13 7383.0 14 7637.0 15 7979.0 16 7813.0 17 8079.0 18 8060.0 19 7848.0 20 7993.0 21 8490.0 22 9225.0 23 10854.0 24 12713.0 25 15231.0 26 18074.0 27 21569.0 28 26077.0 29 30807.0 30 36951.0 31 45674.0 32 58134.0 33 77397.0 34 110389.0 35 171850.0 36 317485.0 37 631137.0 38 662454.0 39 96035.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.255787523124084 16.589722231494715 11.761048131480663 26.393442113900534 2 16.886540769946286 18.46600835135962 37.922983631148796 26.72446724754529 3 20.162602067871592 21.91645749077439 27.718089645036336 30.202850796317676 4 13.789066109099773 14.416600606998417 34.692040308173205 37.1022929757286 5 15.454039040467071 35.68718714152897 33.53540019681333 15.323373621190623 6 35.71326017446373 33.276006581193926 16.273825784621117 14.73690745972123 7 30.968637453526227 29.778062864790755 19.953620326962724 19.299679354720293 8 27.747171192202934 33.48678234002815 19.16837183528401 19.597674632484907 9 26.87122739541475 14.897801121556832 18.258824150256952 39.97214733277147 10-11 26.581983266400748 24.104287553100132 26.969182035808707 22.344547144690413 12-13 26.882441502689474 21.300978556209014 26.917174417248635 24.899405523852877 14-15 24.040807153827554 22.818622494625277 23.76631678718962 29.37425356435755 16-17 24.782807889258073 25.884685159488313 24.57389674014391 24.7586102111097 18-19 24.70880249403286 25.394378259322455 25.627340144530663 24.269479102114023 20-21 25.088898504549224 24.610594862262133 25.571490386387847 24.729016246800796 22-23 24.908855250669166 24.41600312978659 25.37145354407385 25.303688075470394 24-25 24.774480628669508 24.643142338454194 25.32874839538492 25.253628637491378 26-27 24.69947374068675 24.833711487417492 25.334784244547876 25.132030527347887 28-29 24.770793508875276 24.969518039654876 25.214848343030905 25.044840108438944 30-31 24.85946466573429 24.788702224195283 25.117601085321617 25.23423202474881 32-33 24.624924282492948 24.85916834722991 25.143412159736872 25.372495210540265 34-35 24.83987853041357 24.850355398652596 25.256528058993304 25.053238011940525 36-37 24.899499598114797 24.78026298405438 25.2528248853371 25.067412532493723 38-39 24.832406954890683 24.878911805887938 25.231607544844586 25.05707369437679 40-41 24.91659121381537 24.749744540282123 25.285380564651827 25.048283681250684 42-43 24.773533537478137 24.700588592257773 25.226923097101693 25.298954773162404 44-45 24.70931401546168 24.73674446073046 25.354628839072458 25.199312684735403 46-47 24.902656834109994 24.73738424410375 25.233940271842037 25.12601864994422 48-49 24.715668327575266 24.766766233105148 25.209141978736277 25.308423460583306 50-51 24.614408759450242 24.864440086219037 25.362831978754137 25.158319175576583 52-53 24.885954400411574 24.77284137131382 25.29076770757076 25.05043652070384 54-55 24.574088328514527 24.61554781109863 25.509102629510373 25.301261230876477 56-57 24.61060400530476 24.7574058581633 25.471714609115782 25.16027552741616 58-59 24.695392015500428 24.67609808776386 25.401650806332682 25.226859090403032 60-61 24.60252137056049 24.698235677925826 25.50813493890878 25.191108012604914 62-63 24.6490936477533 24.679712409010698 25.49921112005022 25.171982823185786 64-65 24.534556628870632 24.572577381557196 25.548255562405032 25.34461042716714 66-67 24.505183917054218 24.73548093298462 25.410382910073036 25.348952239888128 68-69 24.65161141800316 24.62552100686063 25.438655965000383 25.284211610135827 70-71 24.53386829387501 24.501174677930003 25.529984300071057 25.434972728123928 72-73 24.522706043806604 24.519092535346328 25.51111717248014 25.447084248366924 74-75 24.47147540830735 24.655997612751264 25.561570735065903 25.310956243875488 76-77 24.501658063901996 24.459871356776112 25.551260109138873 25.48721047018302 78-79 24.487413215273918 24.424500178460853 25.593209899690816 25.49487670657441 80-81 24.50783922615271 24.583778237876817 25.44679751313339 25.461585022837085 82-83 24.446270540667843 24.60642207254192 25.528682707987134 25.418624678803102 84-85 24.428757956585603 24.578485547964902 25.581928544226567 25.410827951222924 86-87 24.37069570788753 24.61452178936901 25.589554053037762 25.425228449705696 88-89 24.36562407698167 24.39420849720957 25.620248884605218 25.61991854120354 90-91 24.29536354654837 24.42018097458256 25.697504584217857 25.586950894651217 92-93 24.32819552970471 24.46892337755385 25.730888013706682 25.471993079034753 94-95 24.305958521331846 24.23252104501587 25.812524752840822 25.64899568081146 96-97 24.29416312285812 24.2748844934132 25.800208877731123 25.63074350599756 98-99 24.288918504734067 24.17671254013394 25.779388382271378 25.754980572860614 100-101 24.45380739761834 23.986726459142076 25.901556191484914 25.657909951754664 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 10.0 2 20.0 3 30.0 4 27.0 5 25.5 6 57.5 7 123.0 8 173.5 9 205.5 10 208.5 11 192.0 12 216.5 13 259.5 14 309.0 15 368.5 16 431.0 17 439.0 18 477.5 19 575.0 20 636.0 21 664.0 22 694.5 23 758.5 24 849.5 25 985.0 26 1136.0 27 1351.5 28 1651.5 29 1986.0 30 2485.5 31 3413.0 32 5391.0 33 8122.0 34 11763.5 35 17401.0 36 25508.5 37 34233.5 38 42696.5 39 50224.0 40 56801.0 41 63784.0 42 71639.5 43 81285.5 44 90403.0 45 99271.0 46 106394.5 47 111894.5 48 118109.0 49 121807.5 50 122046.5 51 122734.5 52 123571.0 53 123360.5 54 122686.5 55 118050.0 56 109586.5 57 99768.0 58 91432.5 59 82162.5 60 69471.0 61 57419.5 62 47040.0 63 36569.0 64 26897.5 65 19963.0 66 15324.5 67 12227.5 68 9684.0 69 7412.0 70 5674.5 71 4203.0 72 3013.5 73 2250.5 74 1815.0 75 1418.0 76 1065.0 77 747.5 78 511.0 79 358.0 80 254.0 81 179.5 82 140.5 83 125.5 84 95.5 85 71.5 86 69.0 87 56.0 88 50.0 89 44.5 90 36.0 91 37.5 92 27.5 93 17.0 94 17.5 95 17.0 96 13.0 97 8.5 98 9.5 99 9.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03585227929701596 2 0.05331280492867957 3 0.04888947176865812 4 0.04997590447462831 5 0.04644499818022522 6 0.007837835950213446 7 0.009739093185661261 8 0.01059271888320926 9 0.004268128487739995 10-11 0.010515116547068533 12-13 0.016897908694643343 14-15 0.032243770666472146 16-17 0.02128244068659443 18-19 0.008187046462846717 20-21 0.01656809876604525 22-23 0.027490627577852606 24-25 0.026753405384515695 26-27 0.018255949577106072 28-29 0.011950759765671986 30-31 0.012028362101812714 32-33 0.008885467488113263 34-35 0.005276958857569449 36-37 5.238157689499085E-4 38-39 0.0035503068784382683 40-41 9.894297857942717E-4 42-43 0.15786255229427426 44-45 0.13423264093942283 46-47 0.14026622257436439 48-49 0.14554318143193382 50-51 0.13830676358681102 52-53 0.14395233354104892 54-55 0.1414302576164753 56-57 0.1437583277006971 58-59 0.15107234788196064 60-61 0.15361382439056945 62-63 0.14187647104928447 64-65 0.14152726053665118 66-67 0.1400334155659422 68-69 0.1357846876622374 70-71 0.1297899071953662 72-73 0.13836496533891657 74-75 0.1384425676750573 76-77 0.1341356380192469 78-79 0.1493262953187943 80-81 0.16003541770621463 82-83 0.157299935357254 84-85 0.1514021578105587 86-87 0.16690322445466899 88-89 0.16149046150885327 90-91 0.16622420401343763 92-93 0.16259629479885862 94-95 0.16703902854291527 96-97 0.17247119207276615 98-99 0.16665101686221162 100-101 0.17283980316943462 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2577242.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.67081541469371 #Duplication Level Percentage of deduplicated Percentage of total 1 78.41189509652386 46.789017186210025 2 11.7938660939978 14.074992134411149 3 3.9647230766572172 7.097347766327681 4 1.8339203873980727 4.377260996866959 5 1.0024205628160177 2.9907626185843985 6 0.6294979439764465 2.2537593371368647 7 0.4561736924384046 1.905417933897191 8 0.34499219346138027 1.646877239643546 9 0.24673809857029355 1.325075718200444 >10 1.2365675027012395 13.028392347278 >50 0.06019064039454883 2.42259001711693 >100 0.018363497145624217 1.8246188646937587 >500 5.209711352993518E-4 0.17676715984696545 >1k 1.302427838138505E-4 0.0871206797861044 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.880116807036359E-5 2 0.0 0.0 0.0 0.0 7.760233614072718E-5 3 0.0 0.0 0.0 0.0 7.760233614072718E-5 4 0.0 0.0 0.0 0.0 7.760233614072718E-5 5 0.0 0.0 0.0 0.0 1.1640350421109077E-4 6 0.0 0.0 0.0 0.0 2.3280700842218154E-4 7 0.0 0.0 0.0 0.0 2.7160817649254514E-4 8 0.0 0.0 0.0 0.0 3.1040934456290874E-4 9 0.0 0.0 0.0 0.0 3.880116807036359E-4 10-11 0.0 0.0 0.0 0.0 3.880116807036359E-4 12-13 0.0 0.0 0.0 3.880116807036359E-5 5.238157689499085E-4 14-15 0.0 0.0 0.0 3.880116807036359E-5 5.626169370202721E-4 16-17 0.0 0.0 0.0 3.880116807036359E-5 6.208186891258175E-4 18-19 0.0 0.0 0.0 1.7460525631663614E-4 6.984210252665447E-4 20-21 0.0 0.0 0.0 2.5220759245736334E-4 7.372221933369082E-4 22-23 0.0 0.0 0.0 3.1040934456290874E-4 9.118274496535444E-4 24-25 0.0 0.0 0.0 4.462134328091813E-4 0.0010088303698294534 26-27 0.0 0.0 0.0 5.626169370202721E-4 0.0010864327059701806 28-29 0.0 0.0 0.0 0.0011640350421109075 0.0011252338740405442 30-31 0.0 0.0 0.0 0.004694941336513995 0.0011252338740405442 32-33 0.0 0.0 0.0 0.014511636858315982 0.0011834356261460894 34-35 0.0 0.0 0.0 0.029915700582250328 0.0012804385463219986 36-37 0.0 0.0 0.0 0.057658535752560296 0.0012804385463219986 38-39 0.0 0.0 0.0 0.10802245190789224 0.0013192397143923622 40-41 0.0 0.0 0.0 0.1669614262067745 0.0013192397143923622 42-43 0.0 0.0 0.0 0.23162357279603546 0.0013774414664979074 44-45 0.0 0.0 0.0 0.3129508210715175 0.0014744443866738163 46-47 0.0 0.0 0.0 0.4116415920584873 0.0015520467228145435 48-49 0.0 0.0 0.0 0.5177433861468965 0.0015520467228145435 50-51 0.0 0.0 0.0 0.6344961008706206 0.0015520467228145435 52-53 0.0 0.0 0.0 0.7574958036536732 0.0017654531472015432 54-55 0.0 0.0 0.0 0.899837888719802 0.0019206578194829976 56-57 0.0 0.0 0.0 1.0675365371199135 0.0019400584035181795 58-59 0.0 0.0 0.0 1.2474187522941191 0.0019400584035181795 60-61 0.0 0.0 0.0 1.443888466818405 0.0019400584035181795 62-63 0.0 0.0 0.0 1.6503494821208098 0.00205646190772927 64-65 0.0 0.0 0.0 1.87289358158838 0.00205646190772927 66-67 0.0 0.0 0.0 2.1328032059077104 0.002095263075799634 68-69 0.0 0.0 0.0 2.4227255337294675 0.0021340642438699973 70-71 0.0 0.0 0.0 2.7386252435743326 0.002289268916151452 72-73 0.0 0.0 0.0 3.0721018825550725 0.002502675340538452 74-75 0.0 0.0 0.0 3.4136491644944478 0.0025996782607143605 76-77 0.0 0.0 0.0 3.7921545590208448 0.0025996782607143605 78-79 0.0 0.0 0.0 4.2250591911818915 0.0026190788447495424 80-81 0.0 0.0 0.0 4.686036468441846 0.002735482348960633 82-83 0.0 0.0 0.0 5.168703598653133 0.003104093445629087 84-85 0.0 0.0 0.0 5.666231576235371 0.003104093445629087 86-87 0.0 0.0 0.0 6.187447666924565 0.003142894613699451 88-89 0.0 0.0 0.0 6.7668849103033395 0.0031816957817698143 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2390 0.0 40.71595 1 GGTATCA 1485 0.0 35.1621 1 CAACGCA 2825 0.0 33.102806 5 TCAACGC 2835 0.0 32.819874 4 ATCAACG 3050 0.0 30.349518 3 TATCAAC 3295 0.0 29.100775 2 AACGCAG 3285 0.0 28.746931 6 GTACATG 6405 0.0 27.569725 1 TACATGG 6645 0.0 25.431013 2 ACATGGG 7180 0.0 23.073742 3 ACGCAGA 3965 0.0 22.982157 7 GTATACG 105 0.0022053514 22.604208 1 CGCAGAG 4440 0.0 20.311665 8 TATACCG 235 1.14087015E-7 20.199898 5 GAGTACA 4835 0.0 19.93004 1 CATGGGG 6340 0.0 19.917109 4 AGTACAT 4755 0.0 19.366888 2 ATGGGGG 3365 0.0 18.621124 5 GTCTTAG 870 0.0 18.00542 1 GTATAAG 835 0.0 17.054672 1 >>END_MODULE