##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921646_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2577242 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.902341728095383 31.0 31.0 34.0 26.0 34.0 2 30.068523250823944 31.0 31.0 34.0 26.0 34.0 3 30.13385588159746 31.0 31.0 34.0 26.0 34.0 4 33.59316820073551 37.0 35.0 37.0 28.0 37.0 5 33.21911834433864 37.0 35.0 37.0 27.0 37.0 6 33.16347785733742 37.0 35.0 37.0 26.0 37.0 7 32.98742221335831 37.0 35.0 37.0 26.0 37.0 8 32.907890683141126 37.0 35.0 37.0 25.0 37.0 9 34.35250899993093 39.0 35.0 39.0 25.0 39.0 10-11 34.17801161086153 39.0 35.0 39.0 25.0 39.0 12-13 34.05377822493968 39.0 35.0 39.0 23.0 39.0 14-15 35.12046365843797 40.0 36.0 41.0 23.0 41.0 16-17 35.05309687642837 40.0 36.0 41.0 22.0 41.0 18-19 34.97468320786329 40.0 36.0 41.0 20.0 41.0 20-21 34.89125914446528 40.0 35.5 41.0 18.5 41.0 22-23 34.774322124193226 39.5 35.0 41.0 18.0 41.0 24-25 34.6663446816403 39.0 35.0 41.0 18.0 41.0 26-27 34.509479901382946 39.0 35.0 41.0 17.0 41.0 28-29 34.362014704090655 39.0 34.5 41.0 16.0 41.0 30-31 34.19019866974075 39.0 34.0 41.0 15.5 41.0 32-33 34.14438690662344 39.0 34.0 41.0 15.0 41.0 34-35 34.29729920589529 39.0 35.0 41.0 15.0 41.0 36-37 34.29070126127077 39.0 35.0 41.0 14.0 41.0 38-39 34.179564821619394 39.0 35.0 41.0 9.0 41.0 40-41 34.08662535376965 39.0 34.0 41.0 9.0 41.0 42-43 33.94969389758509 39.0 34.0 41.0 8.5 41.0 44-45 33.81312659036288 39.0 34.0 41.0 7.5 41.0 46-47 33.64396649596739 39.0 34.0 41.0 3.5 41.0 48-49 33.481742692382014 39.0 33.0 40.5 2.0 41.0 50-51 33.30394972610256 38.5 33.0 40.0 2.0 41.0 52-53 33.11670130317603 38.0 33.0 40.0 2.0 41.0 54-55 32.888056496052755 38.0 33.0 40.0 2.0 41.0 56-57 32.63675180677639 38.0 33.0 40.0 2.0 41.0 58-59 32.37674265746096 37.0 32.0 40.0 2.0 41.0 60-61 32.082430365483724 37.0 32.0 40.0 2.0 41.0 62-63 31.767399607797792 36.0 32.0 39.5 2.0 41.0 64-65 31.42150911711046 36.0 31.0 39.0 2.0 41.0 66-67 31.06751189837819 35.0 31.0 39.0 2.0 40.0 68-69 30.70654773591304 35.0 31.0 38.0 2.0 40.0 70-71 30.329985697889448 35.0 30.5 37.0 2.0 39.5 72-73 29.98578422204822 35.0 30.0 37.0 2.0 39.0 74-75 29.59876837332311 35.0 30.0 36.0 2.0 39.0 76-77 27.11732910607541 32.0 26.0 34.0 2.0 36.0 78-79 28.585983194438086 34.0 29.0 35.0 2.0 37.0 80-81 28.78448259806413 34.0 29.0 35.0 2.0 37.0 82-83 28.63576315301396 34.0 29.0 35.0 2.0 36.0 84-85 28.44453004413245 34.0 29.0 35.0 2.0 36.0 86-87 28.24623531666797 34.0 29.0 35.0 2.0 35.5 88-89 27.998033944813876 34.0 29.0 35.0 2.0 35.0 90-91 27.791487178930034 34.0 29.0 35.0 2.0 35.0 92-93 27.61905013188517 34.0 29.0 35.0 2.0 35.0 94-95 27.487457134409574 34.0 28.5 35.0 2.0 35.0 96-97 27.2313267438603 34.0 27.0 35.0 2.0 35.0 98-99 26.983042337506525 34.0 27.0 35.0 2.0 35.0 100-101 25.842109316858874 32.5 23.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 132507.0 3 33503.0 4 16701.0 5 10984.0 6 9249.0 7 8906.0 8 8687.0 9 9285.0 10 9885.0 11 10202.0 12 10395.0 13 10753.0 14 11216.0 15 11685.0 16 11929.0 17 12021.0 18 11868.0 19 11090.0 20 10582.0 21 10940.0 22 11612.0 23 13088.0 24 15596.0 25 18805.0 26 22852.0 27 27180.0 28 32706.0 29 39675.0 30 47823.0 31 58261.0 32 74398.0 33 98307.0 34 139410.0 35 214033.0 36 372492.0 37 603293.0 38 402605.0 39 22718.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.51088881318986 22.056396466452235 13.559599195656826 28.87311552470108 2 14.192125759388244 23.214571873233332 32.91293512165539 29.680367245723037 3 16.402091970329348 25.826707001535066 27.361731750360484 30.409469277775102 4 13.027542159137647 18.22473749970898 31.954375780904414 36.79334456024896 5 14.728431876287443 36.950347949326535 33.588558265018946 14.732661909367078 6 35.71779174907234 35.154658816252905 15.384707912380504 13.742841522294253 7 30.363116851269687 30.663748301478865 20.04670108588949 18.926433761361952 8 27.80751671748326 35.014833686553295 18.43738383900309 18.740265756960348 9 26.83722632070497 14.774947317693613 17.752006894194217 40.6358194674072 10-11 26.68746607368432 25.062981409203815 26.699867312566145 21.549685204545725 12-13 26.91716793110439 21.996094648038156 26.73912811513901 24.34760930571844 14-15 24.0781493939177 23.50796892633829 23.436398075172868 28.977483604571148 16-17 24.86832823615322 26.753696393276222 24.13514136429563 24.242834006274926 18-19 24.859833862943624 26.11673595025938 25.253146862915106 23.7702833238819 20-21 25.43957026780272 25.180241755402015 25.054719538357613 24.32546843843766 22-23 25.090620128028334 25.0240955253717 24.99786593575613 24.88741841084384 24-25 24.974007941473587 25.32013544001417 24.94845724837466 24.757399370137584 26-27 24.958603096284687 25.431657907434293 24.940521355564044 24.669217640716976 28-29 25.069729649186527 25.541986018371066 24.816285462396433 24.571998870045974 30-31 25.178537229754156 25.432743587260926 24.70730178219981 24.681417400785108 32-33 24.96223296777666 25.38452911796469 24.729305548387398 24.923932365871256 34-35 25.151223475867006 25.389692570633205 24.893818099554007 24.56526585394578 36-37 25.198196861094864 25.350941778247282 24.88180360453171 24.569057756126142 38-39 25.21779095637895 25.388457894136447 24.815190036480857 24.578561113003747 40-41 25.13936435535801 25.2569750082213 24.919043244517436 24.684617391903256 42-43 25.07300989349054 25.297840785270587 24.82010424330474 24.809045077934133 44-45 25.01438153389706 25.267942770322875 24.857363316252695 24.860312379527368 46-47 25.1680444833333 25.32436087220548 24.800117959990608 24.707476684470606 48-49 25.01981954993421 25.353715423470923 24.855229004567715 24.771236022027153 50-51 25.011383617330413 25.342832647535463 24.83710320066383 24.80868053447029 52-53 25.21835764013109 25.29601962444426 24.775744472476653 24.709878262947996 54-55 24.86990036899152 25.18410288536662 24.999869041865665 24.94612770377619 56-57 24.937138107577653 25.291725745204452 24.89930456121235 24.87183158600555 58-59 24.97677476136407 25.155843873620555 24.91313333886962 24.95424802614576 60-61 24.958014627362356 25.288387513348397 24.951709060769364 24.80188879851988 62-63 24.95359990065091 25.284964039316627 24.92274735158032 24.838688708452143 64-65 24.8043226685282 25.060166982905997 24.979355655812835 25.15615469275297 66-67 24.815308477205512 25.317776562708357 24.836232516150623 25.030682443935515 68-69 24.9048931159909 25.151867270169927 24.879991910504717 25.06324770333445 70-71 24.774089881101776 24.98421400088553 25.019367329377758 25.222328788634936 72-73 24.762271620271097 25.16617990937582 24.856485838758818 25.215062631594265 74-75 24.704863260458097 25.20579721169083 24.80865933658221 25.280680191268868 76-77 24.730562359732676 24.972791928997818 25.04467953945287 25.251966171816637 78-79 24.57624420695286 25.050151084144723 25.093731182424158 25.27987352647826 80-81 24.73169603974445 25.118732351743972 24.833021560013144 25.31655004849843 82-83 24.577689214423252 25.210129365757144 24.887874407693758 25.324307012125846 84-85 24.571733675339548 25.087770748181942 24.99781167519321 25.3426839012853 86-87 24.504259987448414 25.19873179695163 24.877041646373385 25.419966569226567 88-89 24.461134301792796 24.9803769492749 24.971644788942324 25.58684395998998 90-91 24.290300151218254 25.126697558627463 25.00883484146395 25.574167448690332 92-93 24.36454604470899 25.089744995541135 24.974095878726597 25.571613081023276 94-95 24.20782290824096 24.88976292553587 25.169830188243616 25.732583977979555 96-97 24.099333545337405 25.026595904647834 25.05841591823343 25.815654631781328 98-99 24.114038760234344 24.886864923528332 25.013357369484822 25.9857389467525 100-101 24.040135959398427 24.84048827427791 25.079794664059225 26.039581102264435 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10.0 1 10.0 2 19.0 3 28.5 4 27.5 5 28.5 6 45.5 7 98.0 8 146.0 9 157.5 10 152.0 11 140.0 12 148.5 13 137.0 14 139.5 15 178.5 16 200.5 17 220.0 18 256.5 19 303.0 20 332.0 21 377.0 22 467.0 23 572.5 24 688.5 25 817.5 26 1039.5 27 1350.0 28 1700.0 29 2163.0 30 2839.5 31 4180.0 32 6637.5 33 9784.0 34 13768.5 35 19536.0 36 27640.0 37 36091.0 38 44274.5 39 51695.0 40 58287.5 41 65551.5 42 73377.0 43 82445.0 44 91466.5 45 100652.5 46 107798.0 47 113200.0 48 119227.0 49 122167.5 50 122367.0 51 122966.0 52 123560.0 53 123255.5 54 121407.5 55 116043.5 56 108006.5 57 98573.5 58 89206.0 59 79335.5 60 67207.0 61 55581.5 62 45361.0 63 35080.5 64 25922.5 65 19321.0 66 14823.5 67 11869.0 68 9175.0 69 6788.0 70 5157.5 71 3768.0 72 2781.0 73 2084.0 74 1539.0 75 1167.0 76 883.0 77 595.5 78 353.0 79 192.5 80 118.5 81 77.0 82 40.5 83 19.5 84 16.5 85 9.5 86 4.5 87 4.0 88 5.5 89 4.0 90 1.0 91 0.5 92 0.5 93 1.5 94 1.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1055003759833186 2 1.1640350421109078E-4 3 0.0058201752105545386 4 0.003957719143177087 5 0.016684502270256342 6 0.0020564619077292705 7 0.0 8 0.0 9 3.8801168070363586E-5 10-11 0.03439723549437732 12-13 3.686110966684541E-4 14-15 0.002929488189312451 16-17 0.0 18-19 0.0012610379622868166 20-21 3.4921051263327234E-4 22-23 0.0 24-25 4.850146008795449E-4 26-27 0.002192265995975543 28-29 0.005664970538273084 30-31 0.015462265476039891 32-33 0.01004950253022417 34-35 0.006926008500559901 36-37 0.0026966811808902696 38-39 0.0 40-41 0.0036667103826493594 42-43 0.007527426605650537 44-45 0.005917178130730448 46-47 0.0037637133028252685 48-49 0.009351081504957625 50-51 0.002851885853171724 52-53 0.0018624560673774525 54-55 0.003201096365804996 56-57 0.0063633915635396285 58-59 0.01179555509339053 60-61 0.005975379882835993 62-63 0.018217148409035707 64-65 0.03377641680525151 66-67 0.048792468848482214 68-69 0.04118743990669095 70-71 0.053681416025348025 72-73 0.025880379102932515 74-75 0.021534648279051792 76-77 0.17367402828294742 78-79 0.05917178130730447 80-81 0.053759018361488754 82-83 0.021554048863086976 84-85 0.04153665041932422 86-87 0.05709591881554002 88-89 0.24390414249030554 90-91 0.2504421393101618 92-93 0.035483668200347505 94-95 0.007081213172841355 96-97 0.009603289097414988 98-99 5.044151849147267E-4 100-101 7.760233614072717E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2577242.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.417174634702555 #Duplication Level Percentage of deduplicated Percentage of total 1 80.21896220357743 50.07040972875296 2 10.977877396070856 13.704161810978166 3 3.543735443370159 6.635698620840609 4 1.6961616140998363 4.2347846270379375 5 0.9088151162116089 2.8362835909618744 6 0.5686339494377525 2.129551471516609 7 0.4036573814801001 1.7636607290701112 8 0.2787372015860584 1.3918390870868236 9 0.21769439818166833 1.2229082341471498 >10 1.1212621534031801 12.229667521170787 >50 0.04917932952176644 2.0487849398949876 >100 0.014722055125431323 1.5100649212309323 >500 4.99340385941543E-4 0.1806541354014053 >1k 6.241754823427289E-5 0.04153058190963547 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.880116807036359E-5 0.0 2 0.0 0.0 0.0 3.880116807036359E-5 0.0 3 0.0 0.0 0.0 3.880116807036359E-5 0.0 4 0.0 0.0 0.0 3.880116807036359E-5 0.0 5 0.0 0.0 0.0 3.880116807036359E-5 0.0 6 0.0 0.0 0.0 3.880116807036359E-5 3.880116807036359E-5 7 0.0 0.0 0.0 3.880116807036359E-5 3.880116807036359E-5 8 0.0 0.0 0.0 3.880116807036359E-5 3.880116807036359E-5 9 0.0 0.0 0.0 3.880116807036359E-5 3.880116807036359E-5 10-11 0.0 0.0 0.0 3.880116807036359E-5 3.880116807036359E-5 12-13 0.0 0.0 0.0 5.8201752105545385E-5 1.5520467228145434E-4 14-15 0.0 0.0 0.0 7.760233614072718E-5 2.1340642438699974E-4 16-17 0.0 0.0 0.0 7.760233614072718E-5 3.1040934456290874E-4 18-19 0.0 0.0 0.0 1.3580408824627257E-4 3.4921051263327234E-4 20-21 0.0 0.0 0.0 2.1340642438699974E-4 4.656140168443631E-4 22-23 0.0 0.0 0.0 2.3280700842218154E-4 5.626169370202721E-4 24-25 0.0 0.0 0.0 3.4921051263327234E-4 6.402192731609993E-4 26-27 0.0 0.0 0.0 4.462134328091813E-4 6.984210252665447E-4 28-29 0.0 0.0 0.0 9.700292017590898E-4 6.984210252665447E-4 30-31 0.0 0.0 0.0 0.003880116807036359 6.984210252665447E-4 32-33 0.0 0.0 0.0 0.012474575534621894 6.984210252665447E-4 34-35 0.0 0.0 0.0 0.026501197792058333 6.984210252665447E-4 36-37 0.0 0.0 0.0 0.051469749445337304 6.984210252665447E-4 38-39 1.9400584035181796E-5 0.0 0.0 0.09659550791117016 8.53625697547999E-4 40-41 3.880116807036359E-5 0.0 0.0 0.14969490641546274 9.312280336887262E-4 42-43 3.880116807036359E-5 0.0 0.0 0.2087890853866265 9.312280336887262E-4 44-45 5.8201752105545385E-5 0.0 0.0 0.2823172988799655 9.50628617723908E-4 46-47 7.760233614072718E-5 0.0 0.0 0.3716375877779424 9.700292017590898E-4 48-49 7.760233614072718E-5 0.0 0.0 0.46823309568911264 0.001047631537899817 50-51 7.760233614072718E-5 0.0 0.0 0.5749557084666477 0.001047631537899817 52-53 9.700292017590897E-5 1.9400584035181796E-5 0.0 0.6873626923664911 0.001144634458075726 54-55 1.1640350421109077E-4 3.880116807036359E-5 0.0 0.8175406112425608 0.001241637378251635 56-57 1.1640350421109077E-4 3.880116807036359E-5 0.0 0.9704948157759341 0.001241637378251635 58-59 1.5520467228145437E-4 7.760233614072718E-5 0.0 1.1349147654740999 0.001241637378251635 60-61 1.5520467228145437E-4 7.760233614072718E-5 0.0 1.3147775800642703 0.001241637378251635 62-63 1.5520467228145437E-4 7.760233614072718E-5 0.0 1.5052719147057203 0.0013968420505330894 64-65 1.5520467228145437E-4 7.760233614072718E-5 0.0 1.711112111318999 0.0013968420505330894 66-67 1.5520467228145437E-4 7.760233614072718E-5 0.0 1.950457116561037 0.001416242634568271 68-69 1.5520467228145437E-4 7.760233614072718E-5 0.0 2.21752555638935 0.0014356432186034527 70-71 1.5520467228145437E-4 7.760233614072718E-5 0.0 2.5099117583835744 0.0014356432186034527 72-73 1.5520467228145437E-4 7.760233614072718E-5 0.0 2.820825518131398 0.0015714473068497254 74-75 1.5520467228145437E-4 7.760233614072718E-5 0.0 3.138432479371359 0.0016102484749200888 76-77 1.5520467228145437E-4 7.760233614072718E-5 0.0 3.4912709012192105 0.0016490496429904526 78-79 1.5520467228145437E-4 7.760233614072718E-5 0.0 3.8970535168990725 0.0016684502270256343 80-81 1.5520467228145437E-4 7.760233614072718E-5 0.0 4.328444903505375 0.001687850811060816 82-83 1.5520467228145437E-4 7.760233614072718E-5 0.0 4.780769520285638 0.001901257235447816 84-85 1.5520467228145437E-4 7.760233614072718E-5 0.0 5.248013186188957 0.001901257235447816 86-87 1.5520467228145437E-4 7.760233614072718E-5 0.0 5.7364228892746585 0.0019788595715885433 88-89 1.5520467228145437E-4 7.760233614072718E-5 0.0 6.281521098911162 0.0020176607396589067 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2435 0.0 40.006542 1 GGTATCA 1495 0.0 34.01095 1 TCAACGC 3080 0.0 30.208296 4 CAACGCA 3175 0.0 29.319218 5 ATCAACG 3375 0.0 27.28656 3 GTACATG 6525 0.0 26.436396 1 TATCAAC 3650 0.0 26.14111 2 AACGCAG 3645 0.0 25.797281 6 TACATGG 6850 0.0 24.809233 2 ACATGGG 7570 0.0 21.69707 3 ACGCAGA 4695 0.0 20.141586 1 CATGGGG 6600 0.0 19.347692 4 CGCAGAG 4900 0.0 18.988071 2 AGAGTAC 4830 0.0 17.79801 5 TACCGTA 215 2.400843E-5 17.67052 7 TATACCG 275 5.921029E-7 17.270596 5 CAGAGTA 5455 0.0 17.056196 4 AGTACAT 4820 0.0 15.764159 7 TTTATAC 725 0.0 15.714265 3 TATAGTG 635 0.0 15.706722 5 >>END_MODULE