##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921644_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1762120 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.76441559031167 31.0 31.0 34.0 26.0 34.0 2 29.924545433909156 31.0 31.0 34.0 26.0 34.0 3 30.207458629378248 31.0 31.0 34.0 26.0 34.0 4 33.67731709531701 37.0 35.0 37.0 28.0 37.0 5 33.75999023903026 37.0 35.0 37.0 30.0 37.0 6 33.668777381790115 37.0 35.0 37.0 29.0 37.0 7 33.63293532790048 37.0 35.0 37.0 28.0 37.0 8 33.49668751276871 37.0 35.0 37.0 28.0 37.0 9 35.173530747054684 39.0 37.0 39.0 28.0 39.0 10-11 35.202594318207616 39.0 37.0 39.0 28.0 39.0 12-13 35.131222901959006 39.0 37.0 39.0 27.0 39.0 14-15 36.41947653962273 40.0 38.0 41.0 27.0 41.0 16-17 36.38252843166187 40.0 38.0 41.0 27.0 41.0 18-19 36.35107001793294 40.0 38.0 41.0 27.0 41.0 20-21 36.40301057816721 40.0 38.0 41.0 27.0 41.0 22-23 36.34027960638322 40.0 38.0 41.0 27.0 41.0 24-25 36.32887204049668 40.0 38.0 41.0 27.0 41.0 26-27 36.27986289242503 40.0 38.0 41.0 27.0 41.0 28-29 36.22169120150727 40.0 37.0 41.0 27.0 41.0 30-31 36.12516003450389 40.0 37.0 41.0 27.0 41.0 32-33 36.018522858829144 40.0 37.0 41.0 27.0 41.0 34-35 35.89263585907884 40.0 37.0 41.0 26.0 41.0 36-37 35.79548668649127 40.0 37.0 41.0 25.0 41.0 38-39 35.6843308060745 40.0 36.0 41.0 25.0 41.0 40-41 35.56462641590811 40.0 36.0 41.0 24.5 41.0 42-43 35.351075976664475 40.0 35.5 41.0 24.0 41.0 44-45 35.07033488071187 40.0 35.0 41.0 23.0 41.0 46-47 34.83363817447166 39.5 35.0 41.0 22.5 41.0 48-49 34.648569336935054 39.0 35.0 41.0 21.5 41.0 50-51 34.45327332985268 39.0 35.0 41.0 20.0 41.0 52-53 34.25076981136358 39.0 34.0 41.0 19.5 41.0 54-55 34.00944742696298 38.0 34.0 40.0 18.0 41.0 56-57 33.76399365536967 38.0 34.0 40.0 16.5 41.0 58-59 33.76784186094024 38.0 34.0 40.0 17.5 41.0 60-61 33.55241612376002 37.5 34.0 40.0 14.5 41.0 62-63 33.24699821805552 37.0 34.0 40.0 13.0 41.0 64-65 32.946668217828524 36.5 33.0 39.5 9.5 41.0 66-67 32.623883163462196 36.0 33.0 39.0 7.5 41.0 68-69 32.291966211154744 35.5 33.0 39.0 7.0 41.0 70-71 31.927875797335027 35.0 33.0 38.5 3.5 40.0 72-73 31.5871546773205 35.0 32.0 37.0 2.0 39.5 74-75 31.22463963861712 35.0 32.0 37.0 2.0 39.0 76-77 30.93011769913513 35.0 32.0 36.0 2.0 39.0 78-79 30.663980886659253 35.0 32.0 36.0 2.0 37.5 80-81 30.412123748666378 35.0 32.0 35.5 2.0 37.0 82-83 30.196402628651853 35.0 31.0 35.0 2.0 37.0 84-85 29.99051001066897 35.0 31.0 35.0 2.0 36.0 86-87 29.832937030395208 35.0 31.0 35.0 2.0 36.0 88-89 29.67952891971035 35.0 31.0 35.0 2.0 36.0 90-91 29.507819842008487 35.0 31.0 35.0 2.0 35.0 92-93 29.44202977095771 34.5 31.0 35.0 2.0 35.0 94-95 29.33089063173904 34.0 31.0 35.0 2.0 35.0 96-97 29.252333836515106 34.0 30.5 35.0 2.0 35.0 98-99 29.180020940685083 34.0 30.0 35.0 2.0 35.0 100-101 29.08797414478015 34.0 30.0 35.0 2.0 35.0 102-103 28.257545172859963 33.5 29.0 34.5 2.0 35.0 104-105 29.156997253308514 34.0 30.5 35.0 2.0 35.0 106-107 29.424536353937302 35.0 31.0 35.0 2.0 35.0 108-109 29.43634627607654 35.0 31.0 35.0 2.0 35.0 110-111 29.389208737202914 35.0 31.0 35.0 2.0 35.0 112-113 29.328761662088848 35.0 31.0 35.0 2.0 35.0 114-115 29.234547874151588 35.0 31.0 35.0 2.0 35.0 116-117 29.13549417746805 35.0 31.0 35.0 2.0 35.0 118-119 28.88352495857263 35.0 31.0 35.0 2.0 35.0 120-121 28.794460082173746 35.0 31.0 35.0 2.0 35.0 122-123 28.586299457471682 35.0 30.0 35.0 2.0 35.0 124-125 27.86006571629628 34.0 28.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 79356.0 3 13495.0 4 6703.0 5 5544.0 6 5829.0 7 6335.0 8 6383.0 9 6653.0 10 7116.0 11 7588.0 12 7903.0 13 7826.0 14 8055.0 15 6862.0 16 5836.0 17 5218.0 18 4907.0 19 4597.0 20 4583.0 21 4780.0 22 5312.0 23 7333.0 24 10906.0 25 13793.0 26 14749.0 27 16155.0 28 18727.0 29 22735.0 30 27429.0 31 34220.0 32 44248.0 33 61643.0 34 97269.0 35 163426.0 36 333480.0 37 536084.0 38 148950.0 39 92.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.84340187605546 17.549377722905756 12.676231427476692 24.930988973562094 2 16.932425920849433 19.096980418665183 38.7408034244208 25.2297902360646 3 20.119719764714965 23.553078751472803 27.85485156202113 28.472349921791107 4 13.811997284798732 14.997230313088133 34.2181764108944 36.97259599121873 5 14.808188730392613 37.37073144151896 32.594293680002 15.226786148086427 6 34.247253864584195 33.36311697872277 16.908457608575873 15.481171548117153 7 30.16432371413954 31.471463525291338 19.77801336326165 18.586199397307475 8 27.78222223483956 34.2636600813629 19.35999818310343 18.594119500694113 9 27.88935966340379 16.154302023800604 18.264442824737912 37.69189548805769 10-11 26.797424958011916 25.41752450298487 26.090015182709198 21.69503535629401 12-13 26.528088841767346 22.786703248926994 26.510352045605984 24.174855863699673 14-15 24.272758984483765 24.055939848087526 23.71976942637303 27.95153174105568 16-17 24.64333755604939 27.12289409422457 24.291195395754027 23.942572953972014 18-19 24.64785653780383 26.40295317925507 25.74527806985073 23.20391221309037 20-21 25.510861537605667 25.212748987700266 25.474360277091684 23.802029197602383 22-23 25.398889892480685 24.748573761064034 25.40800169859962 24.444534647855658 24-25 24.84271615051451 25.09561921370706 25.3619479950691 24.699716640709333 26-27 24.570233190863135 25.334837143389215 25.532985787802676 24.561943877944977 28-29 24.651510575047293 25.80331979042943 25.325977848381555 24.219191786141725 30-31 25.266212132995093 25.276514921446203 25.346392235954855 24.110880709603848 32-33 24.771980138273676 25.279053621779095 25.367837604785255 24.581128635161978 34-35 24.80148388876966 25.57411552030922 25.4343054462624 24.190095144658716 36-37 24.904856375765032 25.642366673354367 25.26792177833373 24.184855172546875 38-39 24.926748139612766 25.668859586883347 25.323091506644037 24.081300766859847 40-41 24.914136512371183 25.396345972442496 25.411589775354038 24.277927739832283 42-43 24.699878129149045 25.392050069790507 25.3056279130227 24.602443888037755 44-45 24.557144519399138 25.463147170089766 25.56114325932779 24.418565051183304 46-47 24.53879303983352 25.43083825571244 25.383922864625962 24.646445839828075 48-49 24.452341350711574 25.723607649907187 25.375683331535715 24.448367667845524 50-51 24.515341442244868 25.63398295073629 25.503107684430244 24.3475679225886 52-53 24.658489913780237 25.56408412288176 25.331349220990873 24.446076742347138 54-55 24.405068866895558 25.26980400415395 25.64018583234163 24.684941296608866 56-57 24.548085609781086 25.524900171402347 25.24294771164103 24.68406650717554 58-59 24.5027419610719 25.752382595734503 25.405887716814725 24.33898772637888 60-61 24.834577490731967 25.539152217090187 25.50977719828734 24.116493093890508 62-63 24.735800191577678 25.516699187568737 25.493057083052474 24.254443537801116 64-65 24.549799161795303 25.270790294716903 25.47084802168763 24.70856252180016 66-67 24.519931482645724 25.561968610877344 25.369245812394713 24.548854094082216 68-69 24.470377677060867 25.51487807113967 25.47639259387292 24.538351657926547 70-71 24.367412915126845 25.39747652159003 25.62338932799031 24.611721235292816 72-73 24.518379596176214 25.73679875620775 25.291151943936256 24.45366970367978 74-75 24.461566359117327 25.653434751874283 25.33705044923506 24.54794843977333 76-77 24.39098315364857 25.275401704642686 25.421470960257075 24.912144181451673 78-79 24.374923013084796 25.319995935658525 25.61519995595071 24.689881095305967 80-81 24.53252680306428 25.625622415441608 25.278531353561483 24.56331942793263 82-83 24.54668504704224 25.6675871045601 25.42193832356557 24.363789524832097 84-85 24.565514935854193 25.70358613178106 25.181673373027575 24.549225559337177 86-87 24.317665683004094 25.888659386541928 25.314014268499584 24.479660661954394 88-89 24.249396611031518 25.547562717259765 25.42779312897198 24.775247542736743 90-91 24.546310628855956 25.413870398467864 25.396132082058305 24.64368689061788 92-93 24.51551388502642 25.607019415767578 25.45678984318689 24.420676856019117 94-95 24.500615105632154 25.424536400489817 25.404926804558166 24.669921689319864 96-97 24.2802378433358 25.44357237239419 25.506489835580236 24.769699948689773 98-99 24.129335656864306 25.505604936737132 25.341470799645965 25.0235886067526 100-101 24.152505697637427 25.579816727769707 25.54142099403802 24.726256580554846 102-103 23.9895008654692 25.53188048012258 25.60338809908913 24.87523055531909 104-105 24.111586036677572 25.565817390788638 25.507390479336195 24.81520609319759 106-107 24.122246356969466 25.449868693417933 25.535193143398704 24.8926918062139 108-109 24.102495264939208 25.482970524849634 25.55000207167778 24.864532138533377 110-111 23.979010140804466 25.842480147143533 25.506628779817593 24.671880932234412 112-113 23.90083517940339 25.882190699438983 25.54145634426201 24.67551777689561 114-115 24.006958505794262 25.904967584203735 25.516630743711595 24.57144316629041 116-117 23.909017051924785 25.728029021558168 25.531859951231567 24.83109397528548 118-119 23.927793240375646 25.589474001685552 25.609447972926446 24.873284785012352 120-121 23.87673965852511 25.722812918625394 25.705702569928974 24.694744852920522 122-123 23.81589606734001 25.806302414303367 25.605945170612948 24.771856347743675 124-125 23.769334635781345 25.64920316139653 25.67345328606267 24.908008916759456 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 413.0 1 333.5 2 240.5 3 200.0 4 176.5 5 170.5 6 161.5 7 173.0 8 209.0 9 239.0 10 252.5 11 282.0 12 309.5 13 351.5 14 403.0 15 435.5 16 465.0 17 526.5 18 573.0 19 625.0 20 722.0 21 789.0 22 954.5 23 1224.0 24 1478.0 25 1860.5 26 2447.5 27 3259.5 28 4416.0 29 5890.5 30 7695.5 31 9873.0 32 12592.0 33 15163.0 34 17785.5 35 20959.0 36 24540.0 37 28212.0 38 31459.5 39 35341.5 40 39323.0 41 42775.5 42 46315.0 43 51050.5 44 56525.0 45 61639.0 46 65382.0 47 68876.0 48 73733.0 49 77651.0 50 79550.5 51 80132.0 52 79661.5 53 78338.5 54 77661.5 55 75456.0 56 70462.5 57 64804.0 58 59466.0 59 53606.5 60 45867.0 61 38770.0 62 32517.5 63 25327.5 64 18835.0 65 14391.5 66 11280.5 67 8917.5 68 7070.5 69 5469.0 70 4270.0 71 3238.0 72 2465.5 73 2070.5 74 1655.5 75 1241.5 76 936.5 77 647.0 78 414.0 79 298.0 80 213.0 81 142.5 82 106.0 83 92.5 84 75.0 85 56.0 86 44.5 87 36.0 88 37.0 89 34.0 90 28.0 91 27.5 92 25.5 93 24.0 94 24.0 95 20.0 96 12.5 97 10.5 98 9.0 99 6.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.025253671713617688 2 0.010612217102126982 3 0.009760969740993804 4 0.010668966926202528 5 0.016116950037454884 6 0.09341021042834767 7 0.05805507002928292 8 0.04965609606610219 9 0.027466914852563955 10-11 0.0514153406124441 12-13 0.013960456722584159 14-15 0.029141034662792546 16-17 0.03492951671849817 18-19 0.043356865593716654 20-21 0.03047465552856786 22-23 0.03796563230653985 24-25 0.03265952375547636 26-27 0.046307856445645015 28-29 0.045626858556738474 30-31 0.02616166889882641 32-33 0.030701654824870042 34-35 0.04551335890858738 36-37 0.010129843597484848 38-39 0.022132431389462692 40-41 0.042477243320545706 42-43 0.02377817628765351 44-45 0.01787619458379679 46-47 0.024856422945088868 48-49 0.030077406760039043 50-51 0.029453158695208047 52-53 0.026048169250675324 54-55 0.024090300320069008 56-57 0.02698454134792182 58-59 0.01892606632919438 60-61 0.02377817628765351 62-63 0.02454429891267337 64-65 0.02147980841259392 66-67 0.02965178307947245 68-69 0.023636301727464643 70-71 0.046591605566022744 72-73 0.023324177695049145 74-75 0.010243343245635939 76-77 0.016145324949492657 78-79 0.02593466960252423 80-81 0.018982816153269924 82-83 0.02601979433863755 84-85 0.013364583569790934 86-87 0.01912469071345879 88-89 0.02292692892652033 90-91 0.02252968015799151 92-93 0.008512473611331806 94-95 0.01291058497718657 96-97 0.016343949333757064 98-99 0.008313849227067396 100-101 0.011662088847524572 102-103 0.003972487685288175 104-105 0.00507910925476131 106-107 0.0012768710416997708 108-109 0.01492520373186843 110-111 0.0017592445463419065 112-113 0.0024686173472862234 114-115 0.014045581458697477 116-117 0.006781603977027671 118-119 0.27427189975711075 120-121 0.001617369986153043 122-123 9.931219213220439E-4 124-125 0.30803804508206023 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1762120.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.65717328637108 #Duplication Level Percentage of deduplicated Percentage of total 1 82.43773957759556 53.30191213205329 2 9.653269285435618 12.483062099368286 3 3.112166676630907 6.036717003209825 4 1.4882558920502162 3.8490567642701445 5 0.8226258950889755 2.6594332524312003 6 0.5406196288242163 2.097296221374058 7 0.38608374567852244 1.7474158553171213 8 0.2704672073003663 1.3990116072560506 9 0.19801946652854954 1.1523041065270068 >10 1.0288660243869465 11.54597147639351 >50 0.04739729740071447 2.0413811723389936 >100 0.01413816030977302 1.5224026398200303 >500 2.63357077314728E-4 0.10211078535750312 >1k 8.778569243824262E-5 0.061924884282954895 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 5.6749824075545367E-5 5.6749824075545367E-5 10-11 0.0 0.0 0.0 5.6749824075545367E-5 5.6749824075545367E-5 12-13 0.0 0.0 0.0 5.6749824075545367E-5 8.512473611331805E-5 14-15 0.0 0.0 0.0 5.6749824075545367E-5 1.986243842644088E-4 16-17 0.0 0.0 0.0 5.6749824075545367E-5 2.2699929630218147E-4 18-19 0.0 0.0 0.0 5.6749824075545367E-5 2.2699929630218147E-4 20-21 0.0 0.0 0.0 8.512473611331805E-5 2.2699929630218147E-4 22-23 0.0 0.0 0.0 2.553742083399542E-4 2.8374912037772685E-4 24-25 0.0 2.8374912037772683E-5 0.0 3.688738564910449E-4 2.8374912037772685E-4 26-27 0.0 5.6749824075545367E-5 0.0 5.674982407554537E-4 2.8374912037772685E-4 28-29 0.0 5.6749824075545367E-5 0.0 0.0020146187546818605 2.8374912037772685E-4 30-31 0.0 5.6749824075545367E-5 0.0 0.007689601162236397 3.1212403241549953E-4 32-33 0.0 5.6749824075545367E-5 0.0 0.02054343631534742 3.404989444532722E-4 34-35 0.0 1.1349964815109073E-4 0.0 0.03649013688057567 5.107484166799082E-4 36-37 0.0 1.1349964815109073E-4 0.0 0.05933194107098268 5.107484166799082E-4 38-39 0.0 1.1349964815109073E-4 0.0 0.09812044582661794 5.107484166799082E-4 40-41 0.0 1.1349964815109073E-4 0.0 0.14474042630467845 5.107484166799082E-4 42-43 0.0 1.1349964815109073E-4 0.0 0.18724604453726193 5.107484166799082E-4 44-45 0.0 1.1349964815109073E-4 0.0 0.23897350918212154 5.107484166799082E-4 46-47 0.0 1.1349964815109073E-4 0.0 0.2940208385354005 5.39123328717681E-4 48-49 0.0 1.1349964815109073E-4 0.0 0.35145166049985244 5.674982407554537E-4 50-51 0.0 1.1349964815109073E-4 0.0 0.41274147050144144 6.242480648309991E-4 52-53 0.0 1.1349964815109073E-4 0.0 0.4828558781467777 6.242480648309991E-4 54-55 0.0 1.1349964815109073E-4 0.0 0.5560064013801558 6.242480648309991E-4 56-57 0.0 1.1349964815109073E-4 0.0 0.6327889133543686 6.242480648309991E-4 58-59 0.0 1.1349964815109073E-4 0.0 0.7206943908473884 6.242480648309991E-4 60-61 0.0 1.1349964815109073E-4 0.0 0.8128561051460741 6.242480648309991E-4 62-63 0.0 1.1349964815109073E-4 0.0 0.9206807708896103 7.944975370576351E-4 64-65 0.0 1.1349964815109073E-4 0.0 1.0220359566885344 7.944975370576351E-4 66-67 0.0 1.1349964815109073E-4 0.0 1.1409835879508774 7.944975370576351E-4 68-69 0.0 1.1349964815109073E-4 0.0 1.2653792023244728 7.944975370576351E-4 70-71 0.0 1.1349964815109073E-4 0.0 1.389065443897124 7.944975370576351E-4 72-73 0.0 1.1349964815109073E-4 0.0 1.5177172950763853 9.931219213220439E-4 74-75 0.0 1.1349964815109073E-4 0.0 1.655165368987356 0.001078246657435362 76-77 0.0 1.1349964815109073E-4 0.0 1.8229178489546682 0.001078246657435362 78-79 0.0 1.1349964815109073E-4 0.0 2.007184527727964 0.0011349964815109072 80-81 0.0 1.1349964815109073E-4 0.0 2.1792499943250174 0.0012484961296619981 82-83 0.0 1.1349964815109073E-4 0.0 2.362353301704765 0.0013336208657753162 84-85 0.0 1.1349964815109073E-4 0.0 2.562311306834949 0.0013619957778130889 86-87 0.0 1.1349964815109073E-4 0.0 2.781848001271196 0.0013619957778130889 88-89 0.0 1.1349964815109073E-4 0.0 3.031121603523029 0.0013619957778130889 90-91 0.0 1.1349964815109073E-4 0.0 3.2925680430390667 0.0013619957778130889 92-93 0.0 1.1349964815109073E-4 0.0 3.5427780173881462 0.001418745601888634 94-95 0.0 1.1349964815109073E-4 0.0 3.8049622046171656 0.0014754954259641796 96-97 0.0 1.1349964815109073E-4 0.0 4.100430163666493 0.0015606201620774977 98-99 0.0 1.1349964815109073E-4 0.0 4.4345447529112665 0.0016457448981908155 100-101 0.0 1.1349964815109073E-4 0.0 4.797261253490114 0.0016457448981908155 102-103 0.0 1.1349964815109073E-4 0.0 5.161453249494927 0.001872744194492997 104-105 0.0 1.702494722266361E-4 0.0 5.544259187796518 0.0019294940185685425 106-107 0.0 1.702494722266361E-4 0.0 5.959043651964679 0.0019294940185685425 108-109 0.0 1.702494722266361E-4 0.0 6.413921866842212 0.0019862438426440877 110-111 0.0 1.702494722266361E-4 0.0 6.89984223548907 0.002042993666719633 112-113 0.0 1.702494722266361E-4 0.0 7.369078155857717 0.002042993666719633 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3460 0.0 50.752586 1 GGTATCA 2025 0.0 50.267044 1 TCAACGC 4120 0.0 41.458214 4 CAACGCA 4225 0.0 40.285885 5 TATCAAC 4470 0.0 38.744617 2 ATCAACG 4495 0.0 38.39673 3 AACGCAG 4510 0.0 37.997543 6 GTACATG 9340 0.0 37.15643 1 TACATGG 9535 0.0 36.0148 2 ACATGGG 9855 0.0 34.060295 3 CATGGGG 8640 0.0 32.788315 4 ACGCAGA 5285 0.0 32.30377 7 ATGGGGG 5355 0.0 31.229168 5 CGCAGAG 5790 0.0 29.27994 8 TATACCG 210 3.1322998E-9 28.339636 5 GCAGAGT 6540 0.0 25.284748 9 TGGGGGG 4350 0.0 24.074816 6 GAGTACA 6785 0.0 22.81055 1 AGTACAT 6715 0.0 22.246086 2 CTATACG 135 0.0025520981 22.042566 4 >>END_MODULE