##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921629_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1685389 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.214014687410444 31.0 31.0 34.0 27.0 34.0 2 30.482167024942015 31.0 31.0 34.0 27.0 34.0 3 30.53561996666645 33.0 31.0 34.0 27.0 34.0 4 34.046277150260266 37.0 35.0 37.0 30.0 37.0 5 34.02344087922729 37.0 35.0 37.0 30.0 37.0 6 34.071141439750704 37.0 35.0 37.0 30.0 37.0 7 34.00494900583782 37.0 35.0 37.0 30.0 37.0 8 34.02880462611302 37.0 35.0 37.0 30.0 37.0 9 35.64620452607677 39.0 37.0 39.0 30.0 39.0 10-11 35.66864563611131 39.0 37.0 39.0 30.0 39.0 12-13 35.608731574728445 39.0 37.0 39.0 30.0 39.0 14-15 36.929053174074355 41.0 38.0 41.0 30.0 41.0 16-17 36.89409358907646 41.0 38.0 41.0 30.0 41.0 18-19 36.84809649285714 41.0 38.0 41.0 30.0 41.0 20-21 36.89764440138153 41.0 38.0 41.0 30.0 41.0 22-23 36.827259166874825 40.0 38.0 41.0 30.0 41.0 24-25 36.810366330858926 40.5 38.0 41.0 30.0 41.0 26-27 36.76174135466648 40.0 38.0 41.0 30.0 41.0 28-29 36.70139326885366 40.0 38.0 41.0 30.0 41.0 30-31 36.60810916648916 40.0 38.0 41.0 30.0 41.0 32-33 36.51101882117422 40.0 38.0 41.0 29.5 41.0 34-35 36.37378314442542 40.0 37.0 41.0 28.5 41.0 36-37 36.267420755683105 40.0 37.0 41.0 28.0 41.0 38-39 36.14776054667498 40.0 37.0 41.0 27.0 41.0 40-41 36.02890549303454 40.0 37.0 41.0 27.0 41.0 42-43 35.79330291107868 40.0 36.0 41.0 26.5 41.0 44-45 35.47786950075027 40.0 35.0 41.0 26.0 41.0 46-47 35.23943374496926 39.5 35.0 41.0 25.0 41.0 48-49 35.04466149951139 39.0 35.0 41.0 24.0 41.0 50-51 34.8377914534864 39.0 35.0 41.0 24.0 41.0 52-53 34.62025918052153 39.0 35.0 40.5 23.0 41.0 54-55 34.366492246003745 38.0 34.0 40.0 23.0 41.0 56-57 34.10202511111678 38.0 34.0 40.0 22.0 41.0 58-59 34.0896045364008 38.0 34.0 40.0 22.5 41.0 60-61 33.862598189498094 37.0 34.0 40.0 22.0 41.0 62-63 33.55026643700653 37.0 34.0 40.0 21.5 41.0 64-65 33.24452752450621 36.0 34.0 39.5 20.5 41.0 66-67 32.914817884773186 36.0 33.0 39.0 20.0 41.0 68-69 32.57449556155879 35.0 33.0 39.0 18.5 40.5 70-71 32.21390877714285 35.0 33.0 37.5 17.5 40.0 72-73 31.87491404061614 35.0 33.0 37.0 16.0 39.0 74-75 31.511629362716857 35.0 32.5 36.5 12.5 39.0 76-77 31.228333933590406 35.0 32.0 36.0 11.0 38.5 78-79 30.966509808714783 35.0 32.0 36.0 8.0 37.0 80-81 30.70844772334458 35.0 32.0 35.0 7.0 37.0 82-83 30.49554494541023 35.0 32.0 35.0 6.5 36.5 84-85 30.284554188973583 35.0 31.5 35.0 2.0 36.0 86-87 30.116580801227492 35.0 31.0 35.0 2.0 36.0 88-89 29.95295744780582 35.0 31.0 35.0 2.0 35.5 90-91 29.760949252665114 35.0 31.0 35.0 2.0 35.0 92-93 29.682527001184887 34.5 31.0 35.0 2.0 35.0 94-95 29.55255611612512 34.0 31.0 35.0 2.0 35.0 96-97 29.456244819445242 34.0 31.0 35.0 2.0 35.0 98-99 29.346299281649518 34.0 30.5 35.0 2.0 35.0 100-101 29.222410671957633 34.0 30.0 35.0 2.0 35.0 102-103 28.348331453450804 33.5 29.0 34.5 2.0 35.0 104-105 29.268922189476733 34.0 30.5 35.0 2.0 35.0 106-107 29.53824072662157 35.0 31.0 35.0 2.0 35.0 108-109 29.525665588181717 35.0 31.0 35.0 2.0 35.0 110-111 29.44639130788204 35.0 31.0 35.0 2.0 35.0 112-113 29.348802561307807 35.0 31.0 35.0 2.0 35.0 114-115 29.218766112749044 35.0 31.0 35.0 2.0 35.0 116-117 29.086533435307814 35.0 31.0 35.0 2.0 35.0 118-119 28.773107573385136 35.0 31.0 35.0 2.0 35.0 120-121 28.625790247830025 35.0 30.0 35.0 2.0 35.0 122-123 28.35557844509487 34.0 30.0 35.0 2.0 35.0 124-125 27.56450943966052 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 61401.0 3 11394.0 4 5973.0 5 5195.0 6 5832.0 7 5983.0 8 5941.0 9 6138.0 10 6548.0 11 6884.0 12 6662.0 13 6544.0 14 6454.0 15 6176.0 16 5463.0 17 5128.0 18 4721.0 19 4521.0 20 4561.0 21 4866.0 22 5467.0 23 7120.0 24 10078.0 25 12864.0 26 14751.0 27 16385.0 28 19454.0 29 23469.0 30 28682.0 31 35709.0 32 47122.0 33 64198.0 34 98396.0 35 164953.0 36 332276.0 37 500694.0 38 127333.0 39 53.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.668970764447295 17.211533268564587 11.651015537971322 25.468480429016793 2 17.384738174147053 19.49038236158048 36.74403700483923 26.380842459433236 3 20.484389232234463 23.04275715561516 28.00882973389152 28.46402387825886 4 14.25777344197371 14.926895613736823 33.35255961780045 37.46277132648901 5 15.298881904127773 36.81835526382161 32.09548174378092 15.787281088269697 6 35.16854352994419 32.812551039377006 16.662875523608328 15.356029907070473 7 30.487180050428442 31.202997921474356 19.686564745094152 18.62325728300305 8 27.906213306137083 34.11209904627122 18.86828854777489 19.113399099816807 9 27.88188701126279 15.699415227585256 18.15761969792199 38.26107806322997 10-11 26.83498322503739 25.076305821682283 26.016968194504674 22.071742758775653 12-13 26.604039279542736 22.84719716678377 26.0422501946412 24.5065133590323 14-15 24.487450976668217 24.194497991586505 23.127765723076337 28.19028530866894 16-17 24.890312348645285 26.993757063219974 24.09902396983827 24.01690661829647 18-19 24.88274253219145 26.250209613583852 25.39308668430636 23.473961169918336 20-21 25.55057790945986 25.132681174645345 25.18155746510405 24.135183450790745 22-23 25.73769937159107 24.755168629294527 24.818413147262085 24.688718851852315 24-25 25.126955373909986 25.359499158379055 24.85951221596777 24.654033251743186 26-27 24.722053205982483 25.431782902020377 25.1961759127619 24.64998797923524 28-29 24.860835701092746 25.594299450406755 25.1640810526119 24.380783795888604 30-31 25.199584909680468 25.190356064286178 25.02168481920217 24.588374206831183 32-33 24.77075192182596 25.339257479570954 24.98008731903498 24.909903279568105 34-35 24.961719796927195 25.528406299946425 25.059308715479922 24.450565187646454 36-37 25.024855738805122 25.518914542246446 24.97895680961201 24.477272909336413 38-39 24.957115019579764 25.637607153104945 25.114827298378277 24.290450528937015 40-41 24.913186818405226 25.382482554260466 25.202029855424147 24.502300771910164 42-43 24.895496381431457 25.229148312200167 25.05980007590552 24.81555523046286 44-45 24.756430718615057 25.333786720099837 25.18290506383763 24.726877497447475 46-47 24.785812718771922 25.421994642053825 25.129853635723755 24.662339003450498 48-49 24.643060633398225 25.671205070984282 25.138555861545036 24.547178434072457 50-51 24.58724700369041 25.593979723497927 25.25882749542111 24.55994577739055 52-53 24.835107312668345 25.447673964863842 25.12891259404158 24.588306128426233 54-55 24.684562033734746 25.259043257308537 25.104057956134678 24.952336752822035 56-57 24.596580949546322 25.533942869826635 24.959086116639657 24.910390063987382 58-59 24.532187272265464 25.58252565462923 25.163583126221013 24.721703946884293 60-61 24.78733521762031 25.424788017715265 25.207546050044883 24.580330714619546 62-63 24.58766161412492 25.393925851939485 25.339177866264766 24.679234667670823 64-65 24.517200716669326 25.188558928485588 25.26671837732201 25.027521977523076 66-67 24.548258334122206 25.55401803850743 24.989116535713936 24.908607091656425 68-69 24.489644522677125 25.450147833652426 25.163263901170446 24.896943742500007 70-71 24.354197213532235 25.26983147034555 25.474839276491924 24.90113203963029 72-73 24.488010654031225 25.42750843325444 25.232285417888235 24.852195494826102 74-75 24.330801922116084 25.44661665557023 25.29930703656364 24.92327438575004 76-77 24.400431426481695 25.225660677434526 25.286962404475677 25.086945491608105 78-79 24.33905249923069 25.256053820042574 25.352169517347267 25.052724163379477 80-81 24.33944197620101 25.44811896705867 25.27426877731894 24.938170279421378 82-83 24.390323515857688 25.384880397086835 25.398322760948776 24.8264733261067 84-85 24.363733035205122 25.34748492891861 25.283396857666922 25.005385178209345 86-87 24.244528257994606 25.432595716726027 25.338179366733932 24.984696658545435 88-89 24.280259857489657 25.26729220555127 25.328508804596794 25.123939132362278 90-91 24.3395658707155 25.14860287188106 25.379578262200987 25.132252995202453 92-93 24.28919915003557 25.205800692717446 25.56355240507771 24.941447752169267 94-95 24.27628887146252 24.92583160726223 25.68746882761571 25.110410693659542 96-97 24.281003795223498 24.961627919742195 25.535643975932032 25.221724309102278 98-99 24.120716024512284 25.103640201687856 25.444978645950002 25.330665127849866 100-101 24.03990109285629 25.18791348532563 25.554839525117533 25.217345896700543 102-103 23.805015707648167 25.033977115993324 25.837204741754633 25.32380243460388 104-105 23.72712700293091 25.16840358592462 25.735509429562427 25.36895998158204 106-107 23.793353878723657 25.183727766062606 25.640095314155793 25.38282304105795 108-109 23.790500486752066 25.248917084211225 25.684516418276242 25.276066010760466 110-111 23.658238539524145 25.532576406880754 25.601878758265627 25.20730629532948 112-113 23.514274440696468 25.53933740962587 25.790293439661085 25.156094710016585 114-115 23.369354459212833 25.53895945717001 25.776265103459977 25.315420980157178 116-117 23.334082957927667 25.44209061003223 25.80333450425091 25.420491927789197 118-119 23.483828625948636 25.390632553858218 25.701555866085503 25.42398295410765 120-121 23.31892005749488 25.605483670475433 25.833149149962843 25.242447122066846 122-123 23.23049556389001 25.52070075882312 25.831848498818953 25.41695517846791 124-125 23.031299570549773 25.430328173780026 26.031320403201086 25.507051852469115 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1074.0 1 856.5 2 567.0 3 387.5 4 249.5 5 212.0 6 208.0 7 213.0 8 225.5 9 235.0 10 233.5 11 236.0 12 262.0 13 299.5 14 333.5 15 356.0 16 407.0 17 462.5 18 506.5 19 564.0 20 646.5 21 739.5 22 850.0 23 966.0 24 1129.0 25 1483.0 26 2062.0 27 2854.5 28 3825.5 29 5094.5 30 6774.0 31 8794.5 32 11805.0 33 14704.5 34 17168.5 35 20167.5 36 23719.5 37 27284.0 38 30171.5 39 33252.5 40 35920.0 41 38152.5 42 41341.5 43 46390.0 44 51420.0 45 55775.5 46 59269.0 47 62735.0 48 68249.0 49 72424.5 50 73937.0 51 74236.0 52 73317.5 53 72801.5 54 73549.0 55 72228.5 56 68215.0 57 63571.5 58 59532.0 59 54597.0 60 47229.5 61 40495.0 62 34572.5 63 27265.0 64 20520.5 65 15955.5 66 12598.5 67 10071.0 68 8274.5 69 6815.0 70 5404.0 71 4168.5 72 3180.0 73 2564.0 74 2085.5 75 1675.5 76 1280.0 77 808.5 78 528.5 79 352.5 80 232.0 81 163.0 82 125.0 83 86.5 84 66.0 85 61.5 86 48.0 87 43.5 88 39.5 89 26.5 90 24.5 91 19.5 92 15.0 93 17.5 94 14.0 95 10.5 96 11.5 97 11.5 98 9.5 99 6.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.024920062964692426 2 0.012104030582850605 3 0.010324026085372575 4 0.011629362716856464 5 0.01732537710878616 6 0.09730691252879899 7 0.06063881988075156 8 0.05001812637913265 9 0.027293402294663132 10-11 0.05248046593397726 12-13 0.014062035530076438 14-15 0.02830207150990068 16-17 0.03589675736580694 18-19 0.04399577782933198 20-21 0.031031411739366993 22-23 0.039041431978018126 24-25 0.03233674837085088 26-27 0.047704120532411215 28-29 0.04625045019280415 30-31 0.026967068136792158 32-33 0.03162474657185967 34-35 0.04577578232681001 36-37 0.009760357994504532 38-39 0.02127105374486246 40-41 0.043728777154710276 42-43 0.023703726558082436 44-45 0.017414377333660063 46-47 0.024623395548446086 48-49 0.03020074297387725 50-51 0.028658072409396287 52-53 0.02548373105556047 54-55 0.023169725208839028 56-57 0.026551733754047284 58-59 0.01857138025702078 60-61 0.023822393524580973 62-63 0.023466392625085365 64-65 0.02207205576872758 66-67 0.029281073983513598 68-69 0.02296205801746659 70-71 0.04859412278115023 72-73 0.023318058916962196 74-75 0.009671357769630632 76-77 0.016702375534668853 78-79 0.02613639937130241 80-81 0.018838380931642487 82-83 0.024771729256569255 84-85 0.012341364515847678 86-87 0.017770378233155668 88-89 0.023051058242340494 90-91 0.02141938745298563 92-93 0.00842535462139601 94-95 0.012074363841225972 96-97 0.014507036654445946 98-99 0.006615683382293346 100-101 0.01020535911887404 102-103 0.0037676761863284975 104-105 0.004598344951818245 106-107 8.900022487390153E-4 108-109 0.014210369238199608 110-111 0.0012163364066099874 112-113 0.0020173384304751013 114-115 0.013083033056463522 116-117 0.005992681808176035 118-119 0.28180437869239683 120-121 0.001275669889859255 122-123 9.493357319882829E-4 124-125 0.3164847996515938 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1685389.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.610441312719196 #Duplication Level Percentage of deduplicated Percentage of total 1 80.38113450912348 47.915549013058936 2 10.498478252058087 12.516378434343348 3 3.3877715786947946 6.058396766180523 4 1.6882789506907458 4.0255621323859945 5 0.9696021344724529 2.889920556682871 6 0.621143101729887 2.2215968647481876 7 0.429777212203156 1.793344649990621 8 0.34112244485403226 1.6267567583538063 9 0.23691142747720478 1.2710155269548198 >10 1.3479530726446802 14.278784505026135 >50 0.07350994055705691 2.9425868282084005 >100 0.023920421378673416 2.284176458580243 >500 2.9771558678172503E-4 0.09666176192480332 >1k 9.923852892724169E-5 0.07926974356134422 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.933348324926768E-5 2 0.0 0.0 0.0 0.0 5.933348324926768E-5 3 0.0 0.0 0.0 0.0 5.933348324926768E-5 4 0.0 0.0 0.0 0.0 5.933348324926768E-5 5 0.0 0.0 0.0 0.0 5.933348324926768E-5 6 0.0 0.0 0.0 0.0 1.1866696649853536E-4 7 0.0 0.0 0.0 0.0 1.1866696649853536E-4 8 0.0 0.0 0.0 0.0 1.1866696649853536E-4 9 0.0 0.0 0.0 0.0 1.1866696649853536E-4 10-11 0.0 0.0 0.0 0.0 1.483337081231692E-4 12-13 0.0 0.0 0.0 0.0 2.3733393299707071E-4 14-15 0.0 0.0 0.0 0.0 2.670006746217045E-4 16-17 0.0 0.0 0.0 0.0 3.263341578709722E-4 18-19 0.0 0.0 0.0 0.0 5.340013492434091E-4 20-21 0.0 0.0 0.0 8.900022487390152E-5 5.340013492434091E-4 22-23 0.0 5.933348324926768E-5 0.0 2.6700067462170457E-4 5.340013492434091E-4 24-25 0.0 5.933348324926768E-5 0.0 0.0011273361817360859 5.933348324926767E-4 26-27 0.0 5.933348324926768E-5 0.0 0.002136005396973636 7.416685406158459E-4 28-29 0.0 8.900022487390152E-5 0.0 0.006200348999548473 7.713352822404798E-4 30-31 0.0 1.1866696649853536E-4 0.0 0.020974386328616125 8.010020238651136E-4 32-33 0.0 1.1866696649853536E-4 0.0 0.05013679334563119 8.306687654897474E-4 34-35 0.0 1.1866696649853536E-4 0.0 0.09155156465362002 8.900022487390152E-4 36-37 0.0 1.1866696649853536E-4 0.0 0.14771070654905188 0.0010086692152375505 38-39 0.0 1.1866696649853536E-4 0.0 0.2271582406198213 0.0010680026984868183 40-41 0.0 1.1866696649853536E-4 0.0 0.3107591185180395 0.0010680026984868183 42-43 0.0 1.1866696649853536E-4 0.0 0.39967034316706707 0.0010680026984868183 44-45 0.0 1.1866696649853536E-4 0.0 0.5113359586421888 0.001097669440111452 46-47 0.0 1.1866696649853536E-4 0.0 0.6348682707671641 0.0011570029233607198 48-49 0.0 1.1866696649853536E-4 0.0 0.7519628999595939 0.0013053366314838889 50-51 0.0 1.1866696649853536E-4 0.0 0.8604541740808798 0.0013350033731085228 52-53 0.0 1.1866696649853536E-4 0.0 0.9743447951778491 0.0015130038228563258 54-55 0.0 1.1866696649853536E-4 0.0 1.113867481038502 0.0016910042726041288 56-57 0.0 1.1866696649853536E-4 0.0 1.280772569418692 0.0017800044974780303 58-59 0.0 1.1866696649853536E-4 0.0 1.4446516501531694 0.001809671239102664 60-61 0.0 1.1866696649853536E-4 0.0 1.6024193821129722 0.001839337980727298 62-63 0.0 1.7800044974780304E-4 0.0 1.7609287826133908 0.0018986714639765657 64-65 0.0 1.7800044974780304E-4 0.0 1.9453669152937394 0.0018986714639765657 66-67 0.0 1.7800044974780304E-4 0.0 2.165108470507402 0.0018986714639765657 68-69 0.0 1.7800044974780304E-4 0.0 2.3988230610262677 0.0018986714639765657 70-71 0.0 1.7800044974780304E-4 0.0 2.6301346454735377 0.0018986714639765657 72-73 0.0 1.7800044974780304E-4 0.0 2.8499355341704495 0.0021656721385982704 74-75 0.0 1.7800044974780304E-4 0.0 3.0972968258366467 0.002195338880222904 76-77 0.0 1.7800044974780304E-4 0.0 3.406453940306956 0.002195338880222904 78-79 0.0 1.7800044974780304E-4 0.0 3.7387807799861044 0.002195338880222904 80-81 0.0 1.7800044974780304E-4 0.0 4.060457259422009 0.002225005621847538 82-83 0.0 1.7800044974780304E-4 0.0 4.372017379963913 0.0023140058467214395 84-85 0.0 1.7800044974780304E-4 0.0 4.711434570891349 0.0023140058467214395 86-87 0.0 1.7800044974780304E-4 0.0 5.109947911135055 0.0023140058467214395 88-89 0.0 1.7800044974780304E-4 0.0 5.558182710341648 0.0023140058467214395 90-91 0.0 1.7800044974780304E-4 0.0 6.0149615311361355 0.0023140058467214395 92-93 0.0 1.7800044974780304E-4 0.0 6.452783304032481 0.0023140058467214395 94-95 0.0 1.7800044974780304E-4 0.0 6.907426119429996 0.0024326728132199747 96-97 0.0 1.7800044974780304E-4 0.0 7.428581769549938 0.0024623395548446086 98-99 0.0 1.7800044974780304E-4 0.0 8.026188612836561 0.0024920062964692426 100-101 0.0 1.7800044974780304E-4 0.0 8.641684501322839 0.0024920062964692426 102-103 0.0 2.3733393299707071E-4 0.0 9.242080018322179 0.00255133977971851 104-105 0.0 2.3733393299707071E-4 0.0 9.849358219378434 0.0026106732629677777 106-107 0.0 2.3733393299707071E-4 0.0 10.525433594262214 0.002699673487841679 108-109 0.0 2.670006746217045E-4 0.0 11.270958811289264 0.0028183404543402147 110-111 0.0 2.9666741624633837E-4 0.0 12.05214345174912 0.0028480071959648486 112-113 0.0 2.9666741624633837E-4 0.0 12.803008682268604 0.0028480071959648486 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3195 0.0 40.988644 1 GGTATCA 2255 0.0 40.3884 1 GTACATG 8670 0.0 35.633625 1 TCAACGC 3740 0.0 33.893513 4 TACATGG 9165 0.0 33.117622 2 CAACGCA 3900 0.0 32.50204 5 ACATGGG 9395 0.0 31.735802 3 TATCAAC 4290 0.0 30.381433 2 AACGCAG 4230 0.0 29.823076 6 ATCAACG 4280 0.0 29.478178 3 CATGGGG 7665 0.0 29.348654 4 ATGGGGG 4340 0.0 26.32735 5 ACGCAGA 5060 0.0 24.924488 7 CGCAGAG 5295 0.0 23.705248 8 GAGTACA 6300 0.0 21.44851 1 ATGGGTA 840 0.0 21.25385 5 GCAGAGT 6075 0.0 21.053925 9 AGTACAT 6370 0.0 21.02154 2 ATGGGGA 3150 0.0 20.970467 5 CGCCTTA 685 0.0 20.851734 2 >>END_MODULE