##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921628_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1587857 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.631028486822178 31.0 31.0 34.0 26.0 34.0 2 29.97243328586894 31.0 31.0 34.0 26.0 34.0 3 30.04898551947688 31.0 31.0 34.0 26.0 34.0 4 33.47437017313272 37.0 35.0 37.0 28.0 37.0 5 33.5233053102389 37.0 35.0 37.0 28.0 37.0 6 33.48732725931869 37.0 35.0 37.0 28.0 37.0 7 33.42474479754789 37.0 35.0 37.0 27.0 37.0 8 33.35911294279019 37.0 35.0 37.0 27.0 37.0 9 35.04810004931174 39.0 37.0 39.0 27.0 39.0 10-11 35.072951468551636 39.0 37.0 39.0 27.0 39.0 12-13 34.9968145746122 39.0 37.0 39.0 27.0 39.0 14-15 36.267769074922995 40.0 38.0 41.0 27.0 41.0 16-17 36.24015733154812 40.0 38.0 41.0 27.0 41.0 18-19 36.20294176364749 40.0 38.0 41.0 27.0 41.0 20-21 36.268315723645145 40.0 38.0 41.0 27.0 41.0 22-23 36.21368706375952 40.0 37.5 41.0 27.0 41.0 24-25 36.22090181924443 40.0 37.0 41.0 27.0 41.0 26-27 36.1922364545422 40.0 37.0 41.0 27.0 41.0 28-29 36.14003653981435 40.0 37.0 41.0 27.0 41.0 30-31 36.04272173123903 40.0 37.0 41.0 27.0 41.0 32-33 35.944882631118546 40.0 37.0 41.0 27.0 41.0 34-35 35.81766084729292 40.0 36.5 41.0 26.0 41.0 36-37 35.71809835520453 40.0 36.0 41.0 25.0 41.0 38-39 35.5984225909512 40.0 36.0 41.0 25.0 41.0 40-41 35.48649028218536 40.0 36.0 41.0 24.5 41.0 42-43 35.248875371018926 40.0 35.0 41.0 23.5 41.0 44-45 34.93250210818732 40.0 35.0 41.0 23.0 41.0 46-47 34.68660874373448 39.0 35.0 41.0 22.0 41.0 48-49 34.49762604567036 39.0 35.0 41.0 20.5 41.0 50-51 34.30360951899321 39.0 34.0 41.0 19.5 41.0 52-53 34.11181328041505 39.0 34.0 40.0 18.5 41.0 54-55 33.87863957522623 38.0 34.0 40.0 17.0 41.0 56-57 33.63653496505038 38.0 34.0 40.0 14.5 41.0 58-59 33.64514184841582 38.0 34.0 40.0 14.5 41.0 60-61 33.42972478000223 37.5 34.0 40.0 13.0 41.0 62-63 33.12564859430037 37.0 33.0 40.0 9.0 41.0 64-65 32.83326458238997 36.5 33.0 39.5 8.0 41.0 66-67 32.51022699147342 36.0 33.0 39.0 7.0 41.0 68-69 32.17460419924464 35.5 33.0 39.0 3.5 40.5 70-71 31.804282123642118 35.0 32.0 38.0 2.0 40.0 72-73 31.456931889962384 35.0 32.0 37.0 2.0 39.5 74-75 31.0848316315638 35.0 32.0 37.0 2.0 39.0 76-77 30.77910038498429 35.0 32.0 36.0 2.0 39.0 78-79 30.5053685564884 35.0 31.0 36.0 2.0 37.5 80-81 30.243328901783975 35.0 31.0 35.0 2.0 37.0 82-83 30.022126992544038 35.0 31.0 35.0 2.0 37.0 84-85 29.809294854637415 35.0 31.0 35.0 2.0 36.0 86-87 29.630651248821525 35.0 31.0 35.0 2.0 36.0 88-89 29.475013178138838 35.0 31.0 35.0 2.0 36.0 90-91 29.29431176736948 34.0 30.0 35.0 2.0 35.0 92-93 29.21214126964834 34.0 30.0 35.0 2.0 35.0 94-95 29.090355113842115 34.0 30.0 35.0 2.0 35.0 96-97 29.001280027105715 34.0 30.0 35.0 2.0 35.0 98-99 28.912183527861764 34.0 30.0 35.0 2.0 35.0 100-101 28.811022969952585 34.0 30.0 35.0 2.0 35.0 102-103 27.95259522740398 33.5 28.0 34.5 2.0 35.0 104-105 28.832352661480222 34.0 30.0 35.0 2.0 35.0 106-107 29.090779585315303 35.0 31.0 35.0 2.0 35.0 108-109 29.091511704139606 35.0 31.0 35.0 2.0 35.0 110-111 29.029503601394836 35.0 31.0 35.0 2.0 35.0 112-113 28.946200130112473 35.0 31.0 35.0 2.0 35.0 114-115 28.829253515902252 35.0 31.0 35.0 2.0 35.0 116-117 28.71016659560653 35.0 30.0 35.0 2.0 35.0 118-119 28.43496202743698 34.5 30.0 35.0 2.0 35.0 120-121 28.31282067591729 34.0 30.0 35.0 2.0 35.0 122-123 28.088527493344806 34.0 29.5 35.0 2.0 35.0 124-125 27.345225986974896 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 71731.0 3 12347.0 4 6215.0 5 5018.0 6 5370.0 7 5910.0 8 5935.0 9 6342.0 10 6686.0 11 7391.0 12 7283.0 13 7473.0 14 7832.0 15 7073.0 16 5821.0 17 5167.0 18 4585.0 19 4287.0 20 4285.0 21 4344.0 22 5093.0 23 7036.0 24 10671.0 25 13944.0 26 14674.0 27 15350.0 28 18485.0 29 22051.0 30 26633.0 31 32880.0 32 43410.0 33 58890.0 34 93246.0 35 148503.0 36 293164.0 37 464829.0 38 127782.0 39 121.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.03689266323263 17.45801266565162 12.663698791074705 24.84139588004105 2 16.384650510967294 19.298848945785505 39.164564536192856 25.151936007054342 3 19.906669379204615 24.06598521498858 27.986589313146343 28.040756092660462 4 13.629738711115927 15.247520262422624 34.908053824855074 36.21468720160638 5 14.546298594217888 37.819872435257054 31.998959426449968 15.63486954407509 6 33.761091625208344 33.53686365779673 17.78259532052559 14.91944939646934 7 29.601571356643642 32.915119896604025 19.305076724626304 18.178232022126032 8 27.37733385756916 35.09910073393016 18.656179429792726 18.867385978707958 9 28.27557316585352 16.653070480738037 17.964918690608553 37.10643766279989 10-11 26.57385222466388 25.87166339799784 26.105463796539148 21.44902058079913 12-13 26.310104144457487 23.258424949319764 26.38656933626135 24.0449015699614 14-15 24.150458564174574 24.34196663034943 23.8277296750253 27.679845130450698 16-17 24.59050268630238 27.303863386656186 24.384746036066005 23.720887890975433 18-19 24.563701516046464 26.667580232329197 25.760220515849575 23.008497735774757 20-21 25.41318910392197 25.60807016096035 25.337057292888872 23.641683442228807 22-23 25.351630399515134 25.043077677163446 25.354402491354538 24.250889431966883 24-25 24.72607484027529 25.261152222853255 25.37410845373126 24.638664483140197 26-27 24.39617658576203 25.41488001345838 25.571327354562413 24.61761604621718 28-29 24.622174281356944 26.183913774489405 25.24045602767997 23.953455916473683 30-31 25.3779421088787 25.504434640433328 25.329436506639126 23.78818674404885 32-33 24.800307676897678 25.44202567816959 25.449900291644184 24.30776635328855 34-35 24.738750380797054 25.95270146172513 25.38302591814226 23.925522239335557 36-37 24.714344424272102 26.01420601716626 25.320816334242924 23.95063322431871 38-39 24.894702412466703 25.972166098853904 25.221752483190023 23.911379005489366 40-41 24.881140946109248 25.654339095776518 25.381086131703267 24.083433826410968 42-43 24.768425342724193 25.601653164312964 25.176393589673328 24.45352790328951 44-45 24.360139242368078 25.727556490444805 25.614649612321553 24.29765465486556 46-47 24.315495097731972 25.641496472867836 25.41648569320108 24.626522736199114 48-49 24.282890223443804 25.876555000412633 25.447829409359706 24.392725366783864 50-51 24.412535392138118 25.83754437699285 25.50599457538411 24.24392565548492 52-53 24.467031968475318 25.814283181029758 25.38088493245003 24.337799918044894 54-55 24.18730958535474 25.33317543202648 25.80149349019316 24.67802149242562 56-57 24.462572521055517 25.609680812865754 25.292824431327837 24.634922234750892 58-59 24.319829123464093 25.94126024594682 25.529532703569398 24.209377927019695 60-61 24.833470185580467 25.681828131845563 25.533983609856765 23.950718072717205 62-63 24.653327978960466 25.717651320089136 25.57950850006693 24.04951220088347 64-65 24.435286843952746 25.36734425841231 25.59534289401103 24.602026003623916 66-67 24.455035507815627 25.642640120902332 25.47028248132005 24.432041889961994 68-69 24.233676923992732 25.559661593594203 25.637645870124683 24.569015612288382 70-71 24.25463919896692 25.5670954674893 25.77747911994231 24.40078621360147 72-73 24.294689803356615 26.022634430514024 25.27916658530148 24.403509180827886 74-75 24.280927502275297 25.864502536680302 25.365039475217372 24.489530485827025 76-77 24.17556668422997 25.45369854505932 25.559834226773216 24.810900543937496 78-79 24.153024569161694 25.440397616944075 25.812376079359606 24.594201734534625 80-81 24.351574258931887 25.680975763697226 25.37859282488529 24.588857152485595 82-83 24.47682179278735 25.824287966759496 25.460342017851147 24.238548222602006 84-85 24.459691911172364 25.94480300870653 25.16595188261459 24.429553197506518 86-87 24.121211701283 26.08786575957777 25.336528574024637 24.454393965114598 88-89 24.099251331508643 25.675203230266742 25.512776498675578 24.712768939549036 90-91 24.57709728534079 25.353407111323044 25.53202010317412 24.537475500162046 92-93 24.332482327751674 25.846153264772116 25.507210138754743 24.314154268721467 94-95 24.383297106401365 25.6049561718158 25.471522230277316 24.540224491505512 96-97 24.019682409507872 25.706431142903124 25.518381240234934 24.75550520735407 98-99 24.009907148041954 25.653057721891305 25.344978798514244 24.992056331552504 100-101 23.912152793195894 25.869747119790816 25.530039425239902 24.688060661773388 102-103 23.71507522259748 25.77656015052392 25.666469851916585 24.841894774962014 104-105 23.994207040668805 25.762168095959826 25.522337816190372 24.721287047181 106-107 23.888444890332355 25.702981969879897 25.739226107367035 24.66934703242071 108-109 23.918362462227442 25.638476279857837 25.769331911925185 24.673829345989535 110-111 23.687720781016093 26.16179072179687 25.61812386598305 24.53236463120399 112-113 23.641747259751156 26.284849843684267 25.579728582477017 24.493674314087563 114-115 23.755611718670036 26.362535528418796 25.46699104801946 24.414861704891702 116-117 23.641550455167824 26.036928615425698 25.622037504267002 24.699483425139473 118-119 23.60842838778617 25.857242595131027 25.776816155009886 24.757512862072918 120-121 23.6267805657756 26.00769096091667 25.842088424637776 24.523440048669954 122-123 23.55165242933185 26.147090016399595 25.764369799552096 24.536887754716457 124-125 23.474917232061998 25.997613857442353 25.73379253573923 24.79367637475642 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 469.0 1 389.0 2 284.0 3 239.5 4 217.5 5 200.5 6 203.5 7 237.5 8 271.0 9 314.0 10 326.5 11 328.0 12 356.0 13 401.0 14 459.0 15 520.0 16 579.5 17 639.5 18 709.0 19 780.5 20 873.0 21 1006.5 22 1181.5 23 1424.0 24 1737.0 25 2160.5 26 2842.5 27 3891.0 28 4952.5 29 6208.0 30 7890.0 31 9665.5 32 12073.5 33 14578.5 34 16819.0 35 19290.0 36 22386.5 37 25504.5 38 28238.5 39 31194.5 40 34122.5 41 36782.5 42 39930.5 43 44835.5 44 50058.0 45 55023.0 46 58538.0 47 62182.5 48 67758.5 49 72267.0 50 74434.0 51 74342.0 52 72599.5 53 70665.5 54 69739.0 55 67363.5 56 63312.5 57 58652.0 58 53739.0 59 48055.5 60 40497.0 61 33589.5 62 27695.5 63 21382.5 64 15887.0 65 12071.5 66 9315.0 67 7310.5 68 5631.0 69 4337.5 70 3408.0 71 2554.5 72 1984.0 73 1585.0 74 1251.0 75 976.0 76 687.0 77 442.5 78 280.0 79 199.0 80 147.0 81 105.0 82 81.5 83 62.5 84 54.5 85 51.5 86 42.5 87 40.5 88 36.5 89 23.0 90 20.0 91 22.0 92 15.5 93 10.5 94 11.0 95 8.5 96 9.0 97 9.5 98 5.0 99 2.0 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.026072876839665034 2 0.01146198933531168 3 0.010580297847980013 4 0.011902835078977514 5 0.017067028076205856 6 0.09604139415577095 7 0.05970310928503007 8 0.049437701253954226 9 0.02531714127909503 10-11 0.05161044099059298 12-13 0.0130049494381421 14-15 0.028749440283350452 16-17 0.03432299004255421 18-19 0.04216374648346797 20-21 0.03013495547772879 22-23 0.038290601735546714 24-25 0.03252811808620046 26-27 0.04669815984688797 28-29 0.04512371076236714 30-31 0.025915431931212953 32-33 0.030071977514347953 34-35 0.045690512432794636 36-37 0.009415205525434596 38-39 0.02094017282412711 40-41 0.04301394898910922 42-43 0.022420154963576695 44-45 0.01672064927761127 46-47 0.023774181176264616 48-49 0.030103466496038372 50-51 0.029190286027016284 52-53 0.02534863026078545 54-55 0.023144401542456276 56-57 0.024372471828382532 58-59 0.017507873819871688 60-61 0.023837159139645445 62-63 0.023270357469217948 64-65 0.02188484227483961 66-67 0.028969863155183368 68-69 0.022514621908647944 70-71 0.04764282929760048 72-73 0.02292397867062336 74-75 0.009572650433886679 76-77 0.016783627240992104 78-79 0.025159696370642946 80-81 0.01892487799594044 82-83 0.02493927349881003 84-85 0.012469636749405015 86-87 0.018106164471989605 88-89 0.023427802377670028 90-91 0.021821864311458775 92-93 0.00802969033105626 94-95 0.011336033408550016 96-97 0.015524067973375438 98-99 0.007210976807105425 100-101 0.01061178682967043 102-103 0.004376968454967922 104-105 0.004251012528206255 106-107 8.816914873316678E-4 108-109 0.014453442595901268 110-111 0.0017633829746633357 112-113 0.002834008352137504 114-115 0.013823662962092934 116-117 0.00573099466765584 118-119 0.2785200430517358 120-121 0.0011965813042358348 122-123 8.187135239508343E-4 124-125 0.31284303309428996 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1587857.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.7582369048641 #Duplication Level Percentage of deduplicated Percentage of total 1 83.26103248203492 53.918376664152035 2 9.229498264645123 11.953720702698421 3 2.9862719503465285 5.8015711926867315 4 1.3609090678457956 3.5252028728614317 5 0.7836388613323052 2.5373535515007686 6 0.4967603088342518 1.9301593058653161 7 0.35965271193853243 1.6303332866234632 8 0.2706563310503714 1.4021781444769021 9 0.1943530251588866 1.1327363321774575 >10 0.9853389526866931 11.110992232997887 >50 0.04965976996100355 2.208196872923452 >100 0.021160660631173944 2.3406464705174503 >500 8.735019827154872E-4 0.3376388449420819 >1k 1.9411155171455272E-4 0.17089352557660475 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1649 0.10385066161499429 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 6.297796338083342E-5 7 0.0 0.0 0.0 0.0 6.297796338083342E-5 8 0.0 0.0 0.0 0.0 6.297796338083342E-5 9 0.0 0.0 0.0 0.0 1.8893389014250023E-4 10-11 0.0 0.0 0.0 0.0 1.8893389014250023E-4 12-13 0.0 0.0 0.0 6.297796338083342E-5 1.8893389014250023E-4 14-15 0.0 0.0 0.0 9.446694507125013E-5 2.5191185352333367E-4 16-17 0.0 0.0 0.0 1.2595592676166683E-4 3.148898169041671E-4 18-19 0.0 0.0 0.0 2.5191185352333367E-4 3.148898169041671E-4 20-21 0.0 0.0 0.0 2.5191185352333367E-4 3.4637879859458374E-4 22-23 0.0 0.0 0.0 4.093567619754172E-4 4.408457436658339E-4 24-25 0.0 0.0 0.0 8.187135239508343E-4 5.353126887370841E-4 26-27 0.0 0.0 0.0 0.0011336033408550015 6.297796338083342E-4 28-29 0.0 0.0 0.0 0.0023931626084716696 6.297796338083342E-4 30-31 0.0 0.0 0.0 0.009415205525434595 6.297796338083342E-4 32-33 0.0 0.0 0.0 0.025065229425571697 6.297796338083342E-4 34-35 0.0 0.0 0.0 0.04364372862291756 6.927575971891676E-4 36-37 0.0 0.0 0.0 0.06905533684708384 6.927575971891676E-4 38-39 0.0 0.0 0.0 0.11591094160242389 7.242465788795842E-4 40-41 0.0 0.0 0.0 0.1741655577296948 8.187135239508343E-4 42-43 0.0 0.0 0.0 0.2244534614892903 8.187135239508343E-4 44-45 0.0 0.0 0.0 0.2748043432122666 8.187135239508343E-4 46-47 0.0 0.0 0.0 0.33327938221137043 8.502025056412511E-4 48-49 0.0 0.0 0.0 0.4025236529485967 9.446694507125012E-4 50-51 6.297796338083342E-5 0.0 0.0 0.4749168218548647 9.446694507125012E-4 52-53 6.297796338083342E-5 0.0 0.0 0.551938871069624 9.446694507125012E-4 54-55 6.297796338083342E-5 0.0 0.0 0.6391003723886974 9.446694507125012E-4 56-57 6.297796338083342E-5 0.0 0.0 0.7235538212823951 9.446694507125012E-4 58-59 6.297796338083342E-5 0.0 0.0 0.8254521660325835 9.446694507125012E-4 60-61 6.297796338083342E-5 0.0 0.0 0.9325461927616907 9.446694507125012E-4 62-63 6.297796338083342E-5 0.0 0.0 1.0558570450613627 0.0010076474140933347 64-65 6.297796338083342E-5 0.0 0.0 1.1649033886552755 0.0010076474140933347 66-67 6.297796338083342E-5 0.0 0.0 1.2883087079000186 0.0010076474140933347 68-69 6.297796338083342E-5 0.0 0.0 1.4311742178294393 0.0010076474140933347 70-71 6.297796338083342E-5 0.0 0.0 1.5841791798631741 0.0010076474140933347 72-73 6.297796338083342E-5 0.0 0.0 1.717409061395327 0.0011336033408550015 74-75 6.297796338083342E-5 0.0 0.0 1.8561180257416128 0.0011336033408550015 76-77 6.297796338083342E-5 0.0 0.0 2.0229466507374405 0.0011650923225454183 78-79 6.297796338083342E-5 0.0 0.0 2.216729844060265 0.0011965813042358348 80-81 6.297796338083342E-5 0.0 0.0 2.400688475095679 0.0012280702859262516 82-83 6.297796338083342E-5 0.0 0.0 2.5978724784410687 0.0013225372309975017 84-85 6.297796338083342E-5 0.0 0.0 2.7980164460653576 0.0013225372309975017 86-87 6.297796338083342E-5 0.0 0.0 3.0279804793504708 0.0013540262126879184 88-89 6.297796338083342E-5 0.0 0.0 3.280490623525922 0.0013855151943783352 90-91 6.297796338083342E-5 0.0 0.0 3.550414174576174 0.0013855151943783352 92-93 6.297796338083342E-5 0.0 0.0 3.8067974634995467 0.0015114711211400018 94-95 6.297796338083342E-5 0.0 0.0 4.064566267617298 0.0015744490845208353 96-97 6.297796338083342E-5 0.0 0.0 4.3637430826579475 0.0016689160295920854 98-99 6.297796338083342E-5 0.0 0.0 4.71160186339198 0.0017318939929729187 100-101 6.297796338083342E-5 0.0 0.0 5.074165998575438 0.0017633829746633355 102-103 6.297796338083342E-5 0.0 0.0 5.453513760999889 0.0017633829746633355 104-105 6.297796338083342E-5 0.0 0.0 5.839631654487778 0.0018263609380441688 106-107 6.297796338083342E-5 0.0 0.0 6.259064890604129 0.0018893389014250023 108-109 6.297796338083342E-5 0.0 0.0 6.703846756981265 0.0019838058464962524 110-111 6.297796338083342E-5 0.0 0.0 7.181503120243196 0.002235717700019586 112-113 6.297796338083342E-5 0.0 0.0 7.655412294683967 0.002330184645090836 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3685 0.0 41.848724 1 GGTATCA 2530 0.0 38.1254 1 GTACATG 9215 0.0 35.666763 1 TCAACGC 4385 0.0 35.158215 4 TACATGG 9340 0.0 34.479485 2 CAACGCA 4450 0.0 34.24338 5 AACGCAG 4630 0.0 33.035458 6 ACATGGG 9685 0.0 32.75852 3 TATCAAC 4680 0.0 32.6887 2 CATGGGG 8295 0.0 32.57888 4 ATCAACG 4715 0.0 32.19253 3 ATGGGGG 5285 0.0 31.761484 5 ACGCAGA 5620 0.0 27.204897 7 TGGGGGG 4340 0.0 26.329323 6 CGCAGAG 5850 0.0 26.135303 8 TACGTCT 325 2.3646862E-11 23.806099 6 CTACGTC 480 0.0 23.561832 5 CTCTACG 480 0.0 23.561832 3 TCTACGT 380 0.0 23.496563 4 GCAGAGT 6585 0.0 22.585037 9 >>END_MODULE