##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921621_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2155415 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.734011779634084 33.0 31.0 34.0 30.0 34.0 2 31.919873435046153 34.0 31.0 34.0 30.0 34.0 3 32.006353300872455 34.0 31.0 34.0 30.0 34.0 4 35.39747102066191 37.0 35.0 37.0 33.0 37.0 5 35.24306224091416 37.0 35.0 37.0 33.0 37.0 6 35.26273362670298 37.0 35.0 37.0 33.0 37.0 7 35.15460874124009 37.0 35.0 37.0 33.0 37.0 8 35.190350814112364 37.0 36.0 37.0 33.0 37.0 9 36.912692451337676 39.0 38.0 39.0 34.0 39.0 10-11 36.874837096336435 39.0 38.0 39.0 34.0 39.0 12-13 36.79998584959277 39.0 38.0 39.0 33.0 39.0 14-15 38.247498741541655 41.0 39.0 41.0 34.0 41.0 16-17 38.24883955062018 41.0 39.0 41.0 34.0 41.0 18-19 38.25082965461408 41.0 39.0 41.0 34.0 41.0 20-21 38.185824075642046 41.0 39.0 41.0 34.0 41.0 22-23 38.190044840552744 41.0 39.0 41.0 34.0 41.0 24-25 38.1512411762932 41.0 39.0 41.0 34.0 41.0 26-27 38.08663760807083 41.0 39.0 41.0 34.0 41.0 28-29 38.01932876035474 41.0 39.0 41.0 33.0 41.0 30-31 37.91801880380344 41.0 38.5 41.0 33.0 41.0 32-33 37.813457269249774 41.0 38.0 41.0 33.0 41.0 34-35 37.68802318810995 41.0 38.0 41.0 33.0 41.0 36-37 37.617121992748494 41.0 38.0 41.0 33.0 41.0 38-39 37.53764240297112 40.0 38.0 41.0 32.5 41.0 40-41 37.42676955481891 40.0 38.0 41.0 32.0 41.0 42-43 37.278915197305395 40.0 38.0 41.0 32.0 41.0 44-45 37.140311494538174 40.0 37.5 41.0 31.5 41.0 46-47 36.962129798669864 40.0 37.0 41.0 31.0 41.0 48-49 36.78843842137129 40.0 37.0 41.0 31.0 41.0 50-51 36.551957975610264 40.0 36.0 41.0 30.0 41.0 52-53 36.42832865132701 40.0 36.0 41.0 30.0 41.0 54-55 36.29911594750895 40.0 35.5 41.0 30.0 41.0 56-57 36.099536516169735 39.0 35.0 41.0 30.0 41.0 58-59 35.905598457837584 39.0 35.0 41.0 30.0 41.0 60-61 35.65102938413253 39.0 35.0 41.0 29.0 41.0 62-63 35.301280727841274 38.0 35.0 41.0 29.0 41.0 64-65 35.010481972149215 37.0 35.0 40.0 29.0 41.0 66-67 34.70244662860749 37.0 35.0 39.5 29.0 41.0 68-69 34.33131670699146 36.0 35.0 39.0 28.0 41.0 70-71 33.953825829364646 35.5 35.0 39.0 28.0 41.0 72-73 33.63008886919688 35.0 34.0 37.5 28.0 40.0 74-75 33.306659970353735 35.0 34.0 37.0 27.5 39.0 76-77 32.98350387280408 35.0 34.0 36.5 27.0 39.0 78-79 32.72304614192626 35.0 34.0 36.0 27.0 38.0 80-81 32.47420427156719 35.0 34.0 36.0 26.0 37.0 82-83 32.2517248418518 35.0 34.0 35.0 26.0 37.0 84-85 32.04603498630194 35.0 34.0 35.0 26.0 36.0 86-87 31.922732049280533 35.0 34.0 35.0 26.0 36.0 88-89 31.82478548214613 35.0 34.0 35.0 25.5 36.0 90-91 31.719747937172194 35.0 34.0 35.0 25.0 36.0 92-93 31.642940454622426 35.0 34.0 35.0 25.0 35.0 94-95 31.579416956827338 35.0 33.0 35.0 25.0 35.0 96-97 31.513757907409943 35.0 33.0 35.0 25.0 35.0 98-99 31.439522319367732 35.0 33.0 35.0 24.5 35.0 100-101 31.372336185838922 35.0 33.0 35.0 24.0 35.0 102-103 30.67420960696664 34.0 31.5 35.0 23.0 35.0 104-105 31.198570112948087 35.0 33.0 35.0 24.0 35.0 106-107 31.29745315867246 35.0 33.0 35.0 24.0 35.0 108-109 31.28747294604519 35.0 33.0 35.0 24.0 35.0 110-111 31.2188880099656 35.0 33.0 35.0 23.0 35.0 112-113 31.180735264438635 35.0 33.0 35.0 23.0 35.0 114-115 31.052141466956478 35.0 33.0 35.0 20.5 35.0 116-117 31.235319648420372 35.0 33.5 35.0 23.5 35.0 118-119 31.222248383721926 35.0 34.0 35.0 23.0 35.0 120-121 31.143213487889803 35.0 34.0 35.0 21.5 35.0 122-123 31.008705748080995 35.0 33.0 35.0 19.0 35.0 124-125 30.36431012125275 34.5 32.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 34991.0 3 9405.0 4 5005.0 5 3992.0 6 4083.0 7 4581.0 8 4959.0 9 5298.0 10 5760.0 11 6121.0 12 6434.0 13 7820.0 14 9847.0 15 8853.0 16 5539.0 17 5068.0 18 4750.0 19 4377.0 20 4349.0 21 4401.0 22 4899.0 23 6077.0 24 7843.0 25 10208.0 26 12448.0 27 14731.0 28 17951.0 29 22019.0 30 26892.0 31 33496.0 32 43570.0 33 59402.0 34 91375.0 35 163061.0 36 385404.0 37 815334.0 38 294680.0 39 392.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.8351053388482 17.71870938042223 10.856590760697813 27.589594520031763 2 15.916595410631942 19.537685588526905 36.92029175460581 27.62542724623534 3 18.7055504916712 23.055545757815963 28.410371412712347 29.828532337800485 4 13.292252212060376 14.591698267529186 34.103557885344635 38.01249163506581 5 14.652848933042279 37.2679719635883 32.94477918355831 15.134399919811111 6 35.5131947246172 33.7295240465215 16.056425258214173 14.700855970647128 7 30.98604690457037 31.1861593314546 19.18280230739701 18.644991456578015 8 28.529919742746053 34.589386510784436 18.172273441862345 18.708420304607166 9 27.89506098639183 14.90248349972455 18.01656965991402 39.1858858539696 10-11 27.076648245535846 24.739397636450068 26.276503587663786 21.907450530350296 12-13 26.832350179822512 21.928969238107285 26.914909543300723 24.32377103876948 14-15 24.129188505281306 23.383791645399622 23.882572025358442 28.604447823960633 16-17 24.579990739569542 26.665629993582684 24.56717931697943 24.187199949868347 18-19 24.631392372281347 25.89478882322405 26.131372531273954 23.342446273220652 20-21 25.18237488294131 24.881688355201305 26.060906714087228 23.875030047770153 22-23 24.9999304059283 24.41884310526892 25.973621063063362 24.607605425739415 24-25 24.568636139033043 24.86478774564275 25.95847938700376 24.608096728320454 26-27 24.42139166648108 25.064722847025813 26.062452211804704 24.4514332746884 28-29 24.499248600318005 25.356201494819075 25.89547401743878 24.249075887424134 30-31 24.883801853046112 25.046465340057622 25.820207203403594 24.24952560349267 32-33 24.513547905146684 25.032195051787 25.911199423725396 24.543057619340928 34-35 24.631516775683636 25.110633121176324 26.041839687990937 24.216010415149107 36-37 24.657764646193055 25.135985906229752 25.9540240391207 24.252225408456493 38-39 24.72318003574325 25.231352174937783 25.87734275104251 24.168125038276457 40-41 24.69960194372279 25.10589354807355 25.85526192167995 24.33924258652371 42-43 24.543628005121228 24.999657826845535 25.82829681514507 24.628417352888164 44-45 24.459754393323298 25.079617095590624 25.903394212264004 24.557234298822074 46-47 24.56028387550567 25.07058146132971 25.779435079206664 24.58969958395795 48-49 24.477033309570995 25.279841549357034 25.67058625392421 24.57253888714776 50-51 24.56055984442683 25.370067382409033 25.60570979331066 24.463662979853478 52-53 24.695178177028517 25.327265468543285 25.532076783017153 24.44547957141104 54-55 24.37035710424816 25.03951869546316 25.726589551660574 24.863534648628107 56-57 24.487896559315338 25.243626529559833 25.532250517827435 24.736226393297393 58-59 24.494734156073118 25.235455135937645 25.652593486127866 24.61721722186137 60-61 24.722605237420968 25.170431453476176 25.666485108183494 24.44047820091936 62-63 24.530695178680663 25.254785026692318 25.701153222227664 24.51336657239936 64-65 24.37753286490073 25.03640830188154 25.73506726082912 24.85099157238861 66-67 24.378712143760048 25.30745127860249 25.59721974452772 24.716616833109743 68-69 24.40966307653728 25.23324551516064 25.616167389772805 24.74092401852927 70-71 24.328215216095277 25.10435345397522 25.739474764720484 24.82795656520902 72-73 24.506365854716588 25.3690033690326 25.453350973024776 24.67127980322604 74-75 24.304694633537974 25.38871402377011 25.52788181015092 24.778709532540997 76-77 24.329167637105627 25.123481591662173 25.577554234005852 24.969796537226348 78-79 24.219817988267202 25.156414520575083 25.683970640395415 24.939796850762303 80-81 24.329421480318175 25.43600652310576 25.3634450906206 24.871126905955464 82-83 24.3926718356276 25.439741363271303 25.353094532967784 24.814492268133314 84-85 24.319534931734854 25.462510714455554 25.283377776334365 24.93457657747523 86-87 24.12164246792381 25.500356079919644 25.447906783612435 24.930094668544108 88-89 24.147238871009986 25.257499145748426 25.435262345124134 25.15999963811746 90-91 24.18263431381646 25.206643778417 25.505984967987384 25.10473693977916 92-93 24.15003607193974 25.385992952633252 25.533481951271565 24.93048902415544 94-95 24.18297454379778 25.17248946690304 25.53287193860484 25.111664050694344 96-97 23.987641198541144 25.213615930689016 25.553160522913053 25.24558234785679 98-99 23.966003510254946 25.247251204997312 25.38683093014333 25.399914354604412 100-101 23.945365509658235 25.248084475611428 25.53413147816082 25.272418536569525 102-103 23.84168133147319 25.20266662088989 25.599486310347054 25.35616573728987 104-105 23.95065451432787 25.298608388639778 25.4803831280751 25.270353968957256 106-107 23.883474200294376 25.23050799096688 25.476981677436118 25.40903613130262 108-109 23.876785631021747 25.192966111780112 25.55158278259534 25.3786654746028 110-111 23.743970121728438 25.481711737312462 25.410750842356162 25.363567298602934 112-113 23.73024275637326 25.492365264738247 25.417136027822057 25.360255951066428 114-115 23.667020040224273 25.55848873650782 25.36539367128836 25.40909755197955 116-117 23.486550362025337 25.451615357705904 25.453401590628822 25.608432689639944 118-119 23.639081181309155 25.425191076456333 25.415099929037194 25.520627813197315 120-121 23.482931133914242 25.524379487945616 25.471627206073055 25.52106217206709 122-123 23.41642274318 25.64216946453749 25.253190955321752 25.688216836960752 124-125 23.278921665730405 25.568475401190348 25.325263583971008 25.827339349108236 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 18.0 1 15.5 2 25.5 3 62.5 4 76.0 5 85.5 6 175.5 7 414.0 8 691.0 9 760.0 10 623.0 11 520.5 12 525.5 13 551.0 14 583.0 15 647.5 16 700.0 17 713.5 18 795.5 19 887.0 20 912.0 21 1010.0 22 1166.5 23 1310.5 24 1549.5 25 1901.5 26 2418.5 27 3292.0 28 4486.0 29 5968.5 30 7822.0 31 10058.0 32 13024.0 33 16166.0 34 19371.5 35 22985.0 36 27489.5 37 32039.5 38 36568.0 39 41477.0 40 46510.5 41 51463.0 42 56091.0 43 63003.0 44 70449.5 45 76842.5 46 81922.5 47 86627.0 48 93284.5 49 98128.5 50 99989.5 51 100656.0 52 99853.0 53 98542.0 54 97854.5 55 94883.0 56 88247.5 57 80780.5 58 73997.5 59 66883.5 60 57490.0 61 47707.5 62 39345.0 63 30400.0 64 22453.0 65 17107.0 66 12963.5 67 10141.5 68 8015.5 69 6061.5 70 4621.0 71 3550.5 72 2680.5 73 2088.5 74 1628.0 75 1233.5 76 872.5 77 493.0 78 280.0 79 156.0 80 90.0 81 61.0 82 35.0 83 15.5 84 7.5 85 6.5 86 7.0 87 5.5 88 2.0 89 3.0 90 3.5 91 1.0 92 0.5 93 1.5 94 1.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.023754126235550926 2 0.001948580667760037 3 0.033543424352154926 4 0.1658613306486222 5 0.023336573235316634 6 0.06894263981646226 7 0.05224051980709051 8 0.04491014491408847 9 0.03498166246407305 10-11 0.06342166125780882 12-13 0.05602169419810107 14-15 0.05848061742170301 16-17 0.050454320861643816 18-19 0.03648949274269688 20-21 0.023800521013354736 22-23 0.002737291890424814 24-25 0.0046394777803810405 26-27 0.003294029224070538 28-29 0.004825056891596282 30-31 0.002087765001171468 32-33 0.008930994727233504 34-35 0.004314714335754368 36-37 0.00633288717022012 38-39 0.0019949754455638475 40-41 0.003085252723953392 42-43 0.003410016168580065 44-45 0.00459308300257723 46-47 0.004825056891596282 48-49 0.0020181728344657525 50-51 0.0014150407230162172 52-53 7.655138337628717E-4 54-55 0.004917846447203902 56-57 7.191190559590612E-4 58-59 6.959216670571561E-4 60-61 1.391843334114312E-4 62-63 9.046981671743029E-4 64-65 0.0 66-67 0.003410016168580065 68-69 6.727242781552509E-4 70-71 0.0 72-73 0.0022501467234848044 74-75 0.0047786621137924715 76-77 0.0015310276675257434 78-79 2.087765001171468E-4 80-81 0.0 82-83 0.005289004669634386 84-85 0.0015078302786238381 86-87 0.0 88-89 9.046981671743029E-4 90-91 6.959216670571561E-4 92-93 0.0 94-95 0.0030620553350514867 96-97 0.0012990537785066913 98-99 7.423164448609664E-4 100-101 0.0 102-103 0.0012990537785066913 104-105 0.0 106-107 5.799347225476301E-4 108-109 0.002296541501288615 110-111 1.15986944509526E-4 112-113 1.391843334114312E-4 114-115 0.0 116-117 0.0019021858899562266 118-119 0.0028068840571305294 120-121 0.0026908971126210035 122-123 0.0012062642228990706 124-125 0.10919010956126779 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2155415.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.77444240534499 #Duplication Level Percentage of deduplicated Percentage of total 1 77.85615377935555 44.9809587242706 2 11.781522312619973 13.613417645954993 3 3.9840322491566367 6.905257251598115 4 1.9054632487710883 4.4034830688650715 5 1.1081349709157589 3.2010940027260584 6 0.7206880140618155 2.4982408896382093 7 0.5037708693178728 2.0373556752427215 8 0.36863378585140444 1.7038089143468997 9 0.2836779676500928 1.4750402763299044 >10 1.4002697180855819 14.134161886588863 >50 0.06554759071814877 2.5633109351597456 >100 0.02105779157140295 1.946593635306631 >500 8.059245574070768E-4 0.2823975712749224 >1k 2.4177736722206587E-4 0.25487952269721625 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2349 0.10898133306115063 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.63947778038104E-5 2 0.0 0.0 0.0 0.0 9.27895556076208E-5 3 0.0 0.0 0.0 0.0 9.27895556076208E-5 4 0.0 0.0 0.0 0.0 9.27895556076208E-5 5 0.0 0.0 0.0 0.0 9.27895556076208E-5 6 0.0 0.0 0.0 0.0 1.391843334114312E-4 7 0.0 0.0 0.0 0.0 1.391843334114312E-4 8 0.0 0.0 0.0 0.0 1.391843334114312E-4 9 0.0 0.0 0.0 0.0 2.3197388901905202E-4 10-11 0.0 0.0 0.0 0.0 2.3197388901905202E-4 12-13 0.0 0.0 0.0 0.0 2.3197388901905202E-4 14-15 0.0 0.0 0.0 0.0 2.783686668228624E-4 16-17 0.0 0.0 0.0 2.31973889019052E-5 3.9435561133238845E-4 18-19 0.0 0.0 0.0 4.63947778038104E-5 4.1755300023429363E-4 20-21 0.0 0.0 0.0 4.63947778038104E-5 4.407503891361988E-4 22-23 0.0 0.0 0.0 6.95921667057156E-5 4.6394777803810403E-4 24-25 0.0 0.0 0.0 3.711582224304832E-4 4.6394777803810403E-4 26-27 0.0 0.0 0.0 6.031321114495352E-4 5.103425558419144E-4 28-29 0.0 0.0 0.0 0.0037579770021086427 5.103425558419144E-4 30-31 0.0 0.0 0.0 0.01329210384079168 5.103425558419144E-4 32-33 0.0 0.0 0.0 0.031014908961847255 5.103425558419144E-4 34-35 0.0 0.0 0.0 0.05279725714073624 5.567373336457248E-4 36-37 0.0 0.0 0.0 0.08664224754861592 5.567373336457248E-4 38-39 0.0 0.0 0.0 0.14391660074741985 5.567373336457248E-4 40-41 0.0 0.0 0.0 0.20951881656200777 5.799347225476301E-4 42-43 0.0 0.0 0.0 0.2689041321508851 6.031321114495352E-4 44-45 0.0 0.0 0.0 0.33471512446559015 6.495268892533455E-4 46-47 0.0 0.0 0.0 0.41068657311932966 6.95921667057156E-4 48-49 0.0 0.0 0.0 0.4900448405527474 6.95921667057156E-4 50-51 0.0 0.0 0.0 0.5732074797660776 6.95921667057156E-4 52-53 2.31973889019052E-5 0.0 0.0 0.6608472150374753 7.423164448609664E-4 54-55 4.63947778038104E-5 0.0 0.0 0.7506907022545541 7.423164448609664E-4 56-57 4.63947778038104E-5 0.0 0.0 0.8506250536439619 7.423164448609664E-4 58-59 4.63947778038104E-5 0.0 0.0 0.9586784911490362 7.423164448609664E-4 60-61 4.63947778038104E-5 0.0 0.0 1.0735519609912707 7.423164448609664E-4 62-63 4.63947778038104E-5 0.0 0.0 1.1943871597812952 7.887112226647768E-4 64-65 4.63947778038104E-5 0.0 0.0 1.309654985234862 7.887112226647768E-4 66-67 4.63947778038104E-5 0.0 0.0 1.4400243108635693 8.583033893704924E-4 68-69 4.63947778038104E-5 0.0 0.0 1.587930862502117 8.815007782723976E-4 70-71 4.63947778038104E-5 0.0 0.0 1.7490831232036523 9.510929449781133E-4 72-73 4.63947778038104E-5 0.0 0.0 1.905735090458218 0.0010902772783895444 74-75 4.63947778038104E-5 0.0 0.0 2.0703205647172354 0.001136672056193355 76-77 4.63947778038104E-5 0.0 0.0 2.2548557934318914 0.0011598694450952601 78-79 4.63947778038104E-5 0.0 0.0 2.4643050178271935 0.0012062642228990704 80-81 4.63947778038104E-5 0.0 0.0 2.678880865169816 0.0012526590007028808 82-83 4.63947778038104E-5 0.0 0.0 2.9025036941841824 0.0013454485563105017 84-85 4.63947778038104E-5 0.0 0.0 3.1277271430327804 0.0013454485563105017 86-87 4.63947778038104E-5 0.0 0.0 3.378096561451043 0.001391843334114312 88-89 4.63947778038104E-5 0.0 0.0 3.6585993880528807 0.0014614355008200277 90-91 4.63947778038104E-5 0.0 0.0 3.9613949053894495 0.001484632889721933 92-93 4.63947778038104E-5 0.0 0.0 4.270407322951728 0.001484632889721933 94-95 4.63947778038104E-5 0.0 0.0 4.582528190626864 0.0015078302786238381 96-97 4.63947778038104E-5 0.0 0.0 4.914065272812892 0.0016238172231333643 98-99 4.63947778038104E-5 0.0 0.0 5.283854849298162 0.001716606778740985 100-101 4.63947778038104E-5 0.0 0.0 5.682130819354974 0.001716606778740985 102-103 4.63947778038104E-5 0.0 0.0 6.0949283548643765 0.001716606778740985 104-105 4.63947778038104E-5 0.0 0.0 6.518675057935479 0.001716606778740985 106-107 4.63947778038104E-5 0.0 0.0 6.9719752344676085 0.001716606778740985 108-109 4.63947778038104E-5 0.0 0.0 7.450885328347441 0.001716606778740985 110-111 4.63947778038104E-5 0.0 0.0 7.963756399579664 0.001716606778740985 112-113 4.63947778038104E-5 0.0 0.0 8.485488873372413 0.001716606778740985 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4585 0.0 50.739014 1 GGTATCA 2625 0.0 43.175865 1 TCAACGC 5545 0.0 40.757065 4 CAACGCA 5700 0.0 39.61283 5 TATCAAC 5980 0.0 38.298893 2 ATCAACG 5905 0.0 38.278534 3 AACGCAG 6085 0.0 37.116863 6 GTACATG 10215 0.0 35.913155 1 TACATGG 10515 0.0 34.429882 2 ACATGGG 10395 0.0 33.907745 3 CATGGGG 9135 0.0 31.397985 4 ACGCAGA 7525 0.0 30.172485 7 CGCAGAG 7850 0.0 29.073786 8 ATGGGGG 5095 0.0 28.180222 5 GCAGAGT 8900 0.0 25.644325 9 AGAGTAC 7910 0.0 22.03596 10-11 GAGTACA 7245 0.0 21.159798 1 CCTATAC 565 0.0 21.111423 3 TATACCG 230 6.07579E-6 20.722095 5 ATGGGGA 3805 0.0 20.667637 5 >>END_MODULE