##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921620_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1259011 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.86470412093302 31.0 31.0 34.0 26.0 34.0 2 29.953945596980486 31.0 31.0 34.0 26.0 34.0 3 29.947551689381587 31.0 31.0 34.0 25.0 34.0 4 33.372456634612405 37.0 35.0 37.0 28.0 37.0 5 33.53722882484744 37.0 35.0 37.0 28.0 37.0 6 33.40259298767048 37.0 35.0 37.0 27.0 37.0 7 33.421617444168476 37.0 35.0 37.0 27.0 37.0 8 33.39151762772526 37.0 35.0 37.0 27.0 37.0 9 34.98098586906707 39.0 37.0 39.0 27.0 39.0 10-11 35.04486458021415 39.0 37.0 39.0 27.0 39.0 12-13 34.990679986116085 39.0 37.0 39.0 27.0 39.0 14-15 36.26657829042002 40.0 38.0 41.0 27.0 41.0 16-17 36.23299558145243 40.0 38.0 41.0 27.0 41.0 18-19 36.180316931305605 40.0 38.0 41.0 27.0 41.0 20-21 36.22962587300667 40.0 38.0 41.0 27.0 41.0 22-23 36.15741760794782 40.0 38.0 41.0 27.0 41.0 24-25 36.145075777733474 40.0 38.0 41.0 27.0 41.0 26-27 36.0988760225288 40.0 37.0 41.0 27.0 41.0 28-29 36.043069520441044 40.0 37.0 41.0 27.0 41.0 30-31 35.93966534049345 40.0 37.0 41.0 26.0 41.0 32-33 35.83927821123088 40.0 37.0 41.0 25.5 41.0 34-35 35.70365667972718 40.0 37.0 41.0 25.0 41.0 36-37 35.59414969368814 40.0 36.5 41.0 24.5 41.0 38-39 35.47446487759043 40.0 36.0 41.0 24.0 41.0 40-41 35.35813785582493 40.0 36.0 41.0 23.5 41.0 42-43 35.108671012405765 40.0 35.0 41.0 22.5 41.0 44-45 34.75000258139127 40.0 35.0 41.0 20.5 41.0 46-47 34.49659256352804 39.0 35.0 41.0 18.5 41.0 48-49 34.29287988746722 39.0 35.0 41.0 16.0 41.0 50-51 34.0874118653451 39.0 34.0 41.0 15.0 41.0 52-53 33.883628896014415 38.5 34.0 40.0 13.5 41.0 54-55 33.64145110725799 38.0 34.0 40.0 10.0 41.0 56-57 33.38618248768279 38.0 33.5 40.0 8.0 41.0 58-59 33.37499394365895 38.0 34.0 40.0 8.0 41.0 60-61 33.158653498658865 37.0 33.0 40.0 6.5 41.0 62-63 32.84609943836869 37.0 33.0 40.0 2.0 41.0 64-65 32.550178671989364 36.0 33.0 39.0 2.0 41.0 66-67 32.223232759682006 36.0 33.0 39.0 2.0 41.0 68-69 31.88483103007043 35.0 32.5 39.0 2.0 40.5 70-71 31.52728371713988 35.0 32.0 37.5 2.0 40.0 72-73 31.17901710151857 35.0 32.0 37.0 2.0 39.0 74-75 30.817813347143115 35.0 31.5 36.5 2.0 39.0 76-77 30.52961610343357 35.0 31.0 36.0 2.0 38.5 78-79 30.259510441131965 35.0 31.0 36.0 2.0 37.0 80-81 30.0080626777685 35.0 31.0 35.0 2.0 37.0 82-83 29.786316005181845 35.0 31.0 35.0 2.0 36.5 84-85 29.57392191172277 35.0 31.0 35.0 2.0 36.0 86-87 29.401966305298366 35.0 31.0 35.0 2.0 36.0 88-89 29.23394950480973 34.0 30.0 35.0 2.0 35.5 90-91 29.047708081978634 34.0 30.0 35.0 2.0 35.0 92-93 28.962240202825868 34.0 30.0 35.0 2.0 35.0 94-95 28.83483106978414 34.0 30.0 35.0 2.0 35.0 96-97 28.73184547235886 34.0 30.0 35.0 2.0 35.0 98-99 28.629276471770304 34.0 29.5 35.0 2.0 35.0 100-101 28.50582639865736 34.0 29.0 35.0 2.0 35.0 102-103 27.627004847455662 33.0 28.0 34.5 2.0 35.0 104-105 28.526693968519737 34.0 29.5 35.0 2.0 35.0 106-107 28.790826291430335 34.5 30.5 35.0 2.0 35.0 108-109 28.779010270760146 35.0 31.0 35.0 2.0 35.0 110-111 28.703754772595314 35.0 30.0 35.0 2.0 35.0 112-113 28.60735370858555 35.0 30.0 35.0 2.0 35.0 114-115 28.477694793770667 35.0 30.0 35.0 2.0 35.0 116-117 28.337911662408032 34.5 30.0 35.0 2.0 35.0 118-119 28.03870617492619 34.0 29.0 35.0 2.0 35.0 120-121 27.897441722113626 34.0 29.0 35.0 2.0 35.0 122-123 27.651339027220573 34.0 29.0 35.0 2.0 35.0 124-125 26.886954522240075 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 61524.0 3 9956.0 4 5117.0 5 4758.0 6 4994.0 7 5321.0 8 5019.0 9 5090.0 10 5334.0 11 5696.0 12 5757.0 13 5841.0 14 5907.0 15 5319.0 16 4330.0 17 3970.0 18 3623.0 19 3349.0 20 3393.0 21 3593.0 22 4339.0 23 5606.0 24 7870.0 25 10166.0 26 11352.0 27 12438.0 28 15022.0 29 17751.0 30 21619.0 31 26868.0 32 35001.0 33 48117.0 34 73140.0 35 121050.0 36 240491.0 37 360139.0 38 90105.0 39 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.21165242303313 17.57405113725291 11.726070973733824 25.488225465980136 2 16.760467497515634 19.637405838396724 38.33190480691857 25.270221857169073 3 19.87687566030392 24.274956509305817 28.017857001008828 27.83031082938144 4 14.476838678620283 15.003900335698955 33.83592852614973 36.68333245953104 5 14.7087235185144 37.64978503404819 32.93713715558578 14.704354291851631 6 34.41568560107361 34.7278139250892 16.145286751003326 14.711213722833866 7 30.067672549105318 31.946926919210185 18.993773171788135 18.991627359896366 8 28.62643099970915 34.556328503336815 18.431069639999173 18.386170856954863 9 28.061160038612336 16.04215577615966 17.889509917253598 38.007174267974406 10-11 26.826508239620907 25.606637470189636 25.866020434355207 21.700833855834247 12-13 26.40635916509148 22.976825175786207 26.36127814038986 24.255537518732456 14-15 24.18195577430715 24.329930898596324 23.463809654334085 28.024303672762446 16-17 24.860178282125624 27.31141846242592 24.08747408759327 23.74092916785519 18-19 24.757215785632354 26.647124472624974 25.39632340291631 23.199336338826367 20-21 25.31737793408486 25.498526775268576 25.481365306103804 23.70272998454276 22-23 25.593280740291362 24.91975766995105 25.18999325801539 24.296968331742193 24-25 25.13115628076303 25.315923163037407 25.165757862027487 24.387162694172076 26-27 24.62518624471065 25.57895782426446 25.47156167431512 24.324294256709774 28-29 24.79140940493275 25.76058090692807 25.339704683395237 24.108305004743947 30-31 25.163068176401232 25.52948495085312 25.230241936765303 24.077204935980347 32-33 24.70229677206118 25.652770141645398 25.236168360034196 24.40876472625922 34-35 24.81693822981354 25.78562602556309 25.383863546968303 24.013572197655062 36-37 24.908708607088357 25.72443304808 25.319629099176172 24.047229245655465 38-39 24.862542095366113 25.86949423594378 25.222780713231945 24.04518295545816 40-41 24.820208625933425 25.661704963755668 25.313346139864002 24.204740270446912 42-43 24.709587774324557 25.599295479245715 25.214383091501897 24.47673365492783 44-45 24.554805062748127 25.548090347770998 25.481042498723987 24.416062090756892 46-47 24.46756406014207 25.57138425201167 25.539168972912552 24.42188271493371 48-49 24.47593978869155 25.874916774852736 25.33198690008374 24.31715653637197 50-51 24.503017923214372 25.860984056689446 25.404581268616223 24.231416751479962 52-53 24.65846913132979 25.665523397297623 25.274833534736242 24.40117393663634 54-55 24.25429428770953 25.5320340635271 25.446907024430626 24.766764624332748 56-57 24.48027667200694 25.69969440073665 25.161548915148437 24.658480012107976 58-59 24.499972592531982 25.713130401555155 25.30273335870179 24.484163647211073 60-61 24.77558319767825 25.69215869936371 25.432408018704912 24.099850084253127 62-63 24.507994163817497 25.691000910066304 25.378813608808137 24.422191317308062 64-65 24.394520365113028 25.4381884648339 25.449072420810282 24.71821874924279 66-67 24.49446165226017 25.67661674347616 25.27276605938107 24.556155544882603 68-69 24.331699922778448 25.74937475967573 25.372403306226342 24.54652201131947 70-71 24.285840861619786 25.56208358017054 25.54241606839685 24.609659489812824 72-73 24.466116294709444 25.848070805009353 25.250481737663797 24.435331162617395 74-75 24.36415702846975 25.821682765632943 25.334265378749365 24.47989482714794 76-77 24.32228676381801 25.526377670020146 25.39025510171657 24.76108046444528 78-79 24.27153264954277 25.558009645101578 25.49862156085392 24.671836144501736 80-81 24.41318227713955 25.827725394647675 25.31186918137468 24.44722314683809 82-83 24.48457508950742 25.658291189800224 25.439890299036026 24.417243421656327 84-85 24.486067205175534 25.737848101416656 25.13145963387911 24.644625059528703 86-87 24.29524512401382 25.84223023885997 25.34162290043225 24.520901736693965 88-89 24.265314285918574 25.583202280732348 25.43205649237697 24.71942694097211 90-91 24.440776733738108 25.458149368511577 25.43487198431756 24.666201913432758 92-93 24.509047350295436 25.475641718653 25.451771758699728 24.563539172351835 94-95 24.522920395247436 25.378974736606303 25.426557583585748 24.671547284560518 96-97 24.29644611498758 25.353718267039664 25.521496370964382 24.828339247008373 98-99 24.195684767606963 25.41673865340125 25.410622263262933 24.976954315728854 100-101 24.18073481656594 25.630802813947724 25.531587008051655 24.656875361434683 102-103 23.96485953544528 25.59582508404838 25.62485727164953 24.8144581088568 104-105 23.9852177228462 25.684901583872144 25.521430727437366 24.808449965844282 106-107 23.98078468112078 25.598026363080727 25.613038330955114 24.80815062484338 108-109 23.88646423498683 25.66776398364193 25.60333897879615 24.842432802575093 110-111 23.73588946042377 26.094847607761157 25.559060134012395 24.61020279780268 112-113 23.678803023419107 26.096251544911247 25.645685527557404 24.579259904112245 114-115 23.711700547333635 26.206596601606254 25.48274985502411 24.598952996036 116-117 23.591504964360425 26.112905192412406 25.57629593855385 24.719293904673318 118-119 23.6688612850127 25.92559698172603 25.646128644648265 24.75941308861301 120-121 23.644573648028786 26.13735558918026 25.645296446769052 24.572774316021906 122-123 23.58667256554225 26.198553292819604 25.5703945283428 24.644379613295346 124-125 23.465707710745065 26.17966399357438 25.618378359426792 24.73624993625376 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 942.0 1 752.0 2 475.0 3 334.5 4 254.0 5 214.5 6 212.5 7 244.0 8 280.0 9 301.5 10 301.5 11 300.5 12 335.5 13 367.0 14 386.0 15 434.5 16 461.0 17 516.5 18 592.5 19 624.5 20 692.5 21 782.5 22 892.5 23 1014.5 24 1207.0 25 1461.0 26 1837.5 27 2489.0 28 3173.0 29 4054.0 30 5437.0 31 6951.5 32 8768.0 33 10642.5 34 12487.5 35 14487.5 36 16932.5 37 19656.0 38 22208.5 39 24996.5 40 27355.0 41 29651.0 42 32341.5 43 35640.0 44 39452.0 45 42916.0 46 46155.0 47 49536.5 48 52629.0 49 55072.0 50 57167.5 51 58103.5 52 57254.0 53 56184.5 54 55814.0 55 54435.5 56 51162.5 57 46770.0 58 42462.0 59 38023.0 60 32866.0 61 28026.5 62 23449.5 63 18258.5 64 13617.5 65 10561.0 66 8224.0 67 6364.5 68 4962.0 69 3869.5 70 3070.5 71 2333.0 72 1732.0 73 1387.5 74 1103.0 75 842.0 76 615.5 77 404.0 78 280.0 79 189.5 80 132.0 81 103.0 82 88.5 83 69.5 84 50.5 85 37.0 86 31.0 87 32.5 88 26.0 89 22.0 90 18.5 91 14.0 92 10.0 93 11.5 94 15.0 95 12.5 96 9.5 97 6.0 98 3.0 99 2.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0254167755484265 2 0.01096098445525893 3 0.00961071825424877 4 0.01151697642038076 5 0.016441476682888395 6 0.09491577118865523 7 0.05925285799726929 8 0.04964213974302051 9 0.02748188856173616 10-11 0.050833551096853 12-13 0.013224666027540665 14-15 0.028077594238652404 16-17 0.03526577607344177 18-19 0.04269224017899764 20-21 0.02998385240478439 22-23 0.03808544961084534 24-25 0.031612114588355465 26-27 0.046544470223056036 28-29 0.044876494327690544 30-31 0.026608186902258992 32-33 0.029785283845812305 34-35 0.04416164751539105 36-37 0.010325565066548267 38-39 0.0208099849802742 40-41 0.04277166760258647 42-43 0.02247796087563969 44-45 0.016560617818271645 46-47 0.02315309397614477 48-49 0.029944138692989977 50-51 0.028911582186335147 52-53 0.027005324020203156 54-55 0.024145936771005176 56-57 0.026727328037642245 58-59 0.01826830742543155 60-61 0.024145936771005176 62-63 0.024741642447921423 64-65 0.02204111004590111 66-67 0.02998385240478439 68-69 0.023431089958705683 70-71 0.04690189362920578 72-73 0.0227559568582006 74-75 0.0104049924901371 76-77 0.017394605765954387 78-79 0.027084751443791993 80-81 0.01826830742543155 82-83 0.025138779565865587 84-85 0.013065811180362999 86-87 0.019062581661319876 88-89 0.023232521399733603 90-91 0.022120537469489943 92-93 0.008459020612210696 94-95 0.012231823232680255 96-97 0.016322335547505146 98-99 0.007823601223500032 100-101 0.011040411878847762 102-103 0.005043641397890884 104-105 0.00563934707480713 106-107 0.0012311250656269089 108-109 0.014535218516756408 110-111 0.001826830742543155 112-113 0.0030976695199644803 114-115 0.014376363669578741 116-117 0.006949899564022872 118-119 0.28526359181929306 120-121 0.001270838777421325 122-123 0.0011119839302436594 124-125 0.32048965418094044 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1259011.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.56368832889558 #Duplication Level Percentage of deduplicated Percentage of total 1 82.14137528796871 53.85491528287226 2 9.704063492015825 12.724683886286792 3 3.2288183775612147 6.350797253311013 4 1.5100027088552133 3.96005387916685 5 0.8840267227842409 2.8980026263520466 6 0.5742233204903515 2.2588919289487754 7 0.39094887183357435 1.7942434989800864 8 0.2876276683200489 1.5086344640402107 9 0.2033552289945075 1.1999446968462368 >10 1.044680564309579 11.596560477249843 >50 0.024718695797467473 1.0781977076560698 >100 0.005917532769703957 0.6462526184398748 >500 1.2076414976058795E-4 0.039747070242560426 >1k 1.2076414976058795E-4 0.08907460960733164 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 7.942742358883282E-5 7.942742358883282E-5 9 0.0 0.0 0.0 7.942742358883282E-5 7.942742358883282E-5 10-11 0.0 0.0 0.0 7.942742358883282E-5 7.942742358883282E-5 12-13 0.0 0.0 0.0 7.942742358883282E-5 2.7799598256091486E-4 14-15 0.0 0.0 0.0 1.1914113538324922E-4 5.957056769162461E-4 16-17 0.0 0.0 0.0 2.3828227076649845E-4 9.531290830659939E-4 18-19 0.0 0.0 0.0 3.574234061497477E-4 9.531290830659939E-4 20-21 0.0 7.942742358883282E-5 0.0 4.3685082973858054E-4 9.531290830659939E-4 22-23 0.0 7.942742358883282E-5 0.0 6.354193887106626E-4 0.0011914113538324922 24-25 0.0 7.942742358883282E-5 0.0 0.0013502662010101579 0.0015885484717766565 26-27 0.0 7.942742358883282E-5 0.0 0.0027005324020203158 0.0015885484717766565 28-29 0.0 7.942742358883282E-5 0.0 0.006711617293256374 0.0015885484717766565 30-31 0.0 7.942742358883282E-5 0.0 0.019698001050030542 0.001628262183571073 32-33 0.0 7.942742358883282E-5 0.0 0.04868901065995452 0.0017474033189543222 34-35 0.0 7.942742358883282E-5 0.0 0.08649646428823894 0.001826830742543155 36-37 0.0 7.942742358883282E-5 0.0 0.144677052067059 0.001826830742543155 38-39 0.0 7.942742358883282E-5 0.0 0.2260107338220238 0.001826830742543155 40-41 0.0 7.942742358883282E-5 0.0 0.3167168515604709 0.001826830742543155 42-43 0.0 7.942742358883282E-5 0.0 0.4050004328794585 0.0018665444543375714 44-45 0.0 7.942742358883282E-5 0.0 0.5096063497459514 0.0019856855897208204 46-47 0.0 7.942742358883282E-5 0.0 0.6269603680984519 0.0021048267251040694 48-49 0.0 7.942742358883282E-5 0.0 0.7468163502940006 0.0023033952840761517 50-51 0.0 7.942742358883282E-5 0.0 0.8579353158947778 0.0023033952840761517 52-53 0.0 7.942742358883282E-5 0.0 0.9781487214964761 0.0024622501312538173 54-55 0.0 7.942742358883282E-5 0.0 1.113651906139025 0.0027005324020203158 56-57 0.0 1.5885484717766563E-4 0.0 1.2626974665034698 0.002740246113814732 58-59 0.0 1.5885484717766563E-4 0.0 1.4186134990083485 0.0027799598256091486 60-61 0.0 1.5885484717766563E-4 0.0 1.571709857975824 0.0027799598256091486 62-63 0.0 1.5885484717766563E-4 0.0 1.7353700642806138 0.002938814672786814 64-65 0.0 1.5885484717766563E-4 0.0 1.9031604966120232 0.002978528384581231 66-67 0.0 1.5885484717766563E-4 0.0 2.0926743292949785 0.003018242096375647 68-69 0.0 1.5885484717766563E-4 0.0 2.302601009840264 0.003018242096375647 70-71 0.0 2.3828227076649845E-4 0.0 2.522217836063386 0.0030579558081700636 72-73 0.0 3.1770969435533127E-4 0.0 2.730397113289717 0.003534520349703061 74-75 0.0 3.1770969435533127E-4 0.0 2.945168866673921 0.003574234061497477 76-77 0.0 3.1770969435533127E-4 0.0 3.1945312630310614 0.003574234061497477 78-79 0.0 3.1770969435533127E-4 0.0 3.4781268789549893 0.00365366148508631 80-81 0.0 3.1770969435533127E-4 0.0 3.768990104137295 0.003812516332263975 82-83 0.0 3.1770969435533127E-4 0.0 4.063308422245715 0.0041302260266193064 84-85 0.0 3.1770969435533127E-4 0.0 4.365251773018663 0.0041302260266193064 86-87 0.0 3.1770969435533127E-4 0.0 4.6996809400394435 0.004249367162002556 88-89 0.0 3.1770969435533127E-4 3.971371179441641E-5 5.069256741998283 0.004447935720974638 90-91 0.0 3.1770969435533127E-4 7.942742358883282E-5 5.458649686142536 0.004447935720974638 92-93 0.0 3.9713711794416414E-4 7.942742358883282E-5 5.848797190810883 0.004447935720974638 94-95 0.0 3.9713711794416414E-4 7.942742358883282E-5 6.242082078710988 0.004447935720974638 96-97 0.0 4.3685082973858054E-4 7.942742358883282E-5 6.689933606616622 0.00452736314456347 98-99 0.0 4.7656454153299695E-4 7.942742358883282E-5 7.172296350071604 0.0046465042799467195 100-101 0.0 4.7656454153299695E-4 7.942742358883282E-5 7.691910555189748 0.004686217991741137 102-103 0.0 7.148468122994953E-4 7.942742358883282E-5 8.226576257077976 0.004805359127124386 104-105 0.0 7.148468122994953E-4 7.942742358883282E-5 8.768668423071759 0.004884786550713218 106-107 0.0 7.148468122994953E-4 7.942742358883282E-5 9.346582357104108 0.004924500262507635 108-109 0.0 7.148468122994953E-4 7.942742358883282E-5 9.977156672975852 0.004964213974302051 110-111 0.0 7.148468122994953E-4 7.942742358883282E-5 10.642440772955915 0.005003927686096468 112-113 0.0 7.148468122994953E-4 7.942742358883282E-5 11.319559559050715 0.005003927686096468 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACG 250 0.0 85.709236 2 TACGGTC 135 0.0 61.71985 5 GTACGGT 170 0.0 56.019104 4 AGTACGG 345 0.0 51.756786 3 GTATCAA 2545 0.0 38.82576 1 GTACATG 6525 0.0 38.771095 1 TACATGG 6835 0.0 36.92261 2 GGTATCA 1770 0.0 36.32036 1 ACATGGG 7005 0.0 35.431786 3 TACGGTA 70 0.0027855106 34.008896 5 CATGGGG 5865 0.0 32.982265 4 TCAACGC 2925 0.0 32.15114 4 CAACGCA 3100 0.0 30.525724 5 TATTACG 100 4.4300128E-4 29.760149 2 AACGCAG 3200 0.0 29.56827 6 ATGGGGG 3790 0.0 29.522232 5 TATCAAC 3330 0.0 28.955822 2 TTACGGT 145 4.0565083E-6 28.733938 4 TAGGACG 145 4.0565083E-6 28.733938 2 ATCAACG 3280 0.0 28.489899 3 >>END_MODULE