##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921620_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1259011 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.61237590457907 33.0 31.0 34.0 30.0 34.0 2 31.79699621369472 33.0 31.0 34.0 30.0 34.0 3 31.883794502192593 34.0 31.0 34.0 30.0 34.0 4 35.266798304383364 37.0 35.0 37.0 33.0 37.0 5 35.09540663266643 37.0 35.0 37.0 33.0 37.0 6 35.122902023890184 37.0 35.0 37.0 33.0 37.0 7 35.007859343564114 37.0 35.0 37.0 33.0 37.0 8 35.04171448859462 37.0 35.0 37.0 33.0 37.0 9 36.74752325436394 39.0 38.0 39.0 33.0 39.0 10-11 36.7057130557239 39.0 38.0 39.0 33.0 39.0 12-13 36.62587936086341 39.0 38.0 39.0 33.0 39.0 14-15 38.038909509130576 41.0 39.0 41.0 33.0 41.0 16-17 38.04133164841292 41.0 39.0 41.0 33.0 41.0 18-19 38.05809361474999 41.0 39.0 41.0 33.0 41.0 20-21 37.997260151023305 41.0 39.0 41.0 33.0 41.0 22-23 37.99631695036818 41.0 39.0 41.0 33.0 41.0 24-25 37.9523348088301 41.0 39.0 41.0 33.0 41.0 26-27 37.87550227916992 41.0 39.0 41.0 33.0 41.0 28-29 37.79770828054719 41.0 38.0 41.0 33.0 41.0 30-31 37.673358294724984 41.0 38.0 41.0 33.0 41.0 32-33 37.539419036052905 41.0 38.0 41.0 32.0 41.0 34-35 37.402704980337745 40.5 38.0 41.0 32.0 41.0 36-37 37.31954685066294 40.0 38.0 41.0 32.0 41.0 38-39 37.22753931458899 40.0 38.0 41.0 31.5 41.0 40-41 37.097615906453555 40.0 38.0 41.0 31.0 41.0 42-43 36.92825559109491 40.0 37.0 41.0 31.0 41.0 44-45 36.75073251941404 40.0 37.0 41.0 30.0 41.0 46-47 36.52143388739256 40.0 37.0 41.0 30.0 41.0 48-49 36.30963788243312 40.0 36.0 41.0 29.5 41.0 50-51 36.058396233233864 40.0 36.0 41.0 28.5 41.0 52-53 35.916924077708615 40.0 35.0 41.0 28.0 41.0 54-55 35.78082002460661 39.5 35.0 41.0 28.0 41.0 56-57 35.57954100480457 39.0 35.0 41.0 28.0 41.0 58-59 35.37870121865496 39.0 35.0 41.0 28.0 41.0 60-61 35.124587473818735 38.5 35.0 41.0 28.0 41.0 62-63 34.76857589012328 37.5 35.0 40.5 26.5 41.0 64-65 34.47771623917504 37.0 35.0 40.0 27.0 41.0 66-67 34.168112113396944 36.5 35.0 39.5 26.0 41.0 68-69 33.800262269352686 36.0 35.0 39.0 26.0 41.0 70-71 33.4318981327407 35.5 34.0 39.0 26.0 41.0 72-73 33.11777180660058 35.0 34.0 37.0 26.0 39.5 74-75 32.79840843328613 35.0 34.0 37.0 26.0 39.0 76-77 32.482778943154585 35.0 34.0 36.5 25.0 39.0 78-79 32.22745512151999 35.0 34.0 36.0 25.0 38.0 80-81 31.988062852508833 35.0 34.0 36.0 24.0 37.0 82-83 31.768853488968723 35.0 34.0 35.0 24.0 37.0 84-85 31.562860054439554 35.0 33.5 35.0 23.5 36.0 86-87 31.44361606054276 35.0 33.0 35.0 23.0 36.0 88-89 31.343012888688023 35.0 33.0 35.0 23.0 36.0 90-91 31.24150742130132 35.0 33.0 35.0 22.0 35.5 92-93 31.165786081297142 35.0 33.0 35.0 20.5 35.0 94-95 31.09864131449209 35.0 33.0 35.0 20.0 35.0 96-97 31.032458810923814 35.0 33.0 35.0 20.0 35.0 98-99 30.962027734467767 35.0 33.0 35.0 19.5 35.0 100-101 30.89020826664739 35.0 33.0 35.0 19.0 35.0 102-103 30.198871177455956 34.0 31.5 35.0 18.5 35.0 104-105 30.715135133847124 35.0 33.0 35.0 18.0 35.0 106-107 30.813731968982005 35.0 33.0 35.0 18.0 35.0 108-109 30.795242853318996 35.0 33.0 35.0 18.0 35.0 110-111 30.72474068931884 35.0 33.0 35.0 17.0 35.0 112-113 30.67751512893851 35.0 33.0 35.0 16.0 35.0 114-115 30.544759736015017 35.0 33.0 35.0 10.0 35.0 116-117 30.72260369448718 35.0 33.0 35.0 8.5 35.0 118-119 30.695352145453853 35.0 33.0 35.0 2.0 35.0 120-121 30.607224639022217 35.0 33.0 35.0 2.0 35.0 122-123 30.463238605540383 35.0 33.0 35.0 2.0 35.0 124-125 29.80909459885577 34.5 32.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 23478.0 3 6461.0 4 3367.0 5 2703.0 6 2956.0 7 3107.0 8 3324.0 9 3536.0 10 3820.0 11 4057.0 12 4702.0 13 5898.0 14 8040.0 15 7344.0 16 4209.0 17 3761.0 18 3310.0 19 2940.0 20 2730.0 21 2819.0 22 3098.0 23 3675.0 24 4833.0 25 6182.0 26 7543.0 27 8967.0 28 10821.0 29 12949.0 30 15792.0 31 19772.0 32 25558.0 33 35074.0 34 54417.0 35 97692.0 36 225292.0 37 461768.0 38 162782.0 39 234.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.48713108678503 18.078842898125174 11.214230840425794 27.219795174664007 2 16.031816131102538 19.80009277322031 36.88609227758256 27.28199881809459 3 18.764530056459648 23.319280659908884 28.737611215018617 29.178578068612854 4 13.515519825849509 14.775182918484713 33.93897731142449 37.77031994424129 5 14.486815867038477 37.470028839049505 32.75663178968944 15.286523504222577 6 35.013273562560606 33.7293147026563 16.119191822849604 15.13821991193349 7 30.392553429051194 31.78787158749824 19.132976411192107 18.686598572258458 8 28.463404614085093 34.187028338806996 18.405960979013088 18.943606068094823 9 28.114802487567324 14.716438141745572 18.239141126619785 38.92961824406731 10-11 27.027980767816974 24.870420404966286 26.01912170805438 22.082477119162363 12-13 26.93621906350993 22.167937511697485 26.77099397711247 24.124849447680113 14-15 24.210176215759997 23.532190986635005 24.1309812467267 28.126651550878297 16-17 24.371048753381817 26.69788129144947 24.859770602705293 24.071299352463416 18-19 24.363957225157492 25.701137862934413 26.787671621997966 23.147233289910123 20-21 24.937356599444513 24.714152244516615 26.828257774614052 23.52023338142482 22-23 24.965795465421948 24.135911047955453 26.66365097514199 24.23464251148061 24-25 24.464957267672883 24.565637084804973 26.678920346974028 24.29048530054812 26-27 24.08506048231759 24.875671485182647 26.90051256470603 24.138755467793732 28-29 24.167439798943242 25.14698780251448 26.698640452187067 23.98693194635521 30-31 24.668511282352096 24.739640319798696 26.55106774971316 24.04078064813605 32-33 24.364481838820424 24.821152535479555 26.54945531553888 24.26491031016114 34-35 24.301934241661456 24.967413139435223 26.79275392134513 23.93789869755819 36-37 24.402899950592495 24.81349063243198 26.804128624739658 23.979480792235872 38-39 24.41948068298119 25.012500193609032 26.647712176638162 23.920306946771614 40-41 24.46147253439431 24.83360346252538 26.58944983003903 24.115474173041278 42-43 24.260949582732145 24.745276570766347 26.401797986994858 24.591975859506647 44-45 24.1815650833934 24.881835349906765 26.46367884156743 24.4729207251324 46-47 24.26004599877755 24.93990014667025 26.324271921006968 24.47578193354523 48-49 24.237914819933597 25.209574417385504 26.11530762998618 24.43720313269472 50-51 24.317438707789062 25.315421613921323 26.068763877697155 24.29837580059246 52-53 24.523867392958525 25.129190038427385 25.864020435298546 24.48292213331554 54-55 24.033248460715733 24.994211425355587 26.12213952073382 24.85040059319486 56-57 24.242216044479743 25.124305003971404 25.84396346306593 24.789515488482923 58-59 24.224027005559968 25.130619539316918 26.018149324861 24.62720413026211 60-61 24.511768973943404 25.052154094150996 26.12101020683323 24.315066725072366 62-63 24.2059077816093 25.114843083858986 26.08755913917429 24.59168999535743 64-65 24.057017770297477 24.870036878152774 26.17737255671317 24.895572794836582 66-67 24.170845370356396 25.15518724537576 25.94230330835775 24.731664075910096 68-69 24.018160423160733 25.165061360133407 25.98408341848679 24.832694798219066 70-71 23.981968379135836 24.976201548755945 26.14914649242401 24.892683579684206 72-73 24.123839245361548 25.275638271086198 25.801656411066993 24.79886607248526 74-75 23.94743499771434 25.317083109434037 25.812818994444914 24.92266289840671 76-77 23.906663277706734 24.98280367596248 25.869705081057038 25.24082796527375 78-79 23.81643968249619 25.02278578738746 26.02488386694768 25.135890663168674 80-81 24.007494771689842 25.2987463969735 25.711451289941074 24.98230754139559 82-83 23.975515637932652 25.24107850660007 25.840438596073163 24.94296725939412 84-85 23.88129349973689 25.28452427049514 25.58250181197192 25.251680417796045 86-87 23.662660612178925 25.36304289636866 25.815223218859884 25.159073272592536 88-89 23.669011519870757 25.118854391009997 25.792485058560434 25.419649030558812 90-91 23.723113582208104 24.968347895154885 25.921564733915808 25.386973788721207 92-93 23.78295344520421 25.010821986463977 25.901600542012737 25.304624026319072 94-95 23.757217215038654 24.96348202378295 25.876332141617464 25.40296861956093 96-97 23.497745416766282 24.901250286936126 25.965991814079686 25.6350124822179 98-99 23.45140176560552 24.946118014950734 25.8469509369131 25.75552928253064 100-101 23.42703916010265 25.055619053368076 26.00167909573467 25.5156626907946 102-103 23.283012693478042 24.913442727640263 26.045895410061853 25.75764916881984 104-105 23.333195659132446 25.061377541578274 25.865143354585463 25.74028344470382 106-107 23.390541321403255 24.872269912093106 25.968534613712045 25.76865415279159 108-109 23.252221149481343 24.951935163205984 25.927489512314168 25.868354174998505 110-111 23.063487606725765 25.31633001974965 25.86080565714556 25.75937671637903 112-113 23.037218309076064 25.237727600547732 25.955437790507418 25.769616299868787 114-115 22.900117632014336 25.421183770435686 25.790878713529906 25.887819884020075 116-117 22.767812286658245 25.276701402361507 25.933421685034 26.02206462594625 118-119 22.902574481402286 25.1216071525022 25.880440549908972 26.095377816186538 120-121 22.681030203141443 25.2262356281896 26.00401119958697 26.08872296908199 122-123 22.599728513184743 25.35355637402273 25.823257158697466 26.223457954095057 124-125 22.46569798483488 25.303085779984468 25.75423087672345 26.4769853584572 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 59.0 2 45.5 3 66.5 4 77.0 5 94.0 6 221.5 7 527.5 8 865.5 9 970.5 10 747.0 11 544.0 12 529.5 13 563.5 14 628.5 15 675.5 16 718.5 17 753.0 18 786.5 19 819.5 20 888.5 21 980.0 22 1053.0 23 1156.5 24 1328.0 25 1579.5 26 1977.5 27 2578.0 28 3267.0 29 4181.0 30 5494.0 31 6879.5 32 8609.5 33 10326.0 34 12100.5 35 14161.0 36 16650.0 37 19417.0 38 21833.0 39 24508.5 40 26986.0 41 29230.5 42 31774.5 43 35298.5 44 39163.5 45 42564.5 46 46199.0 47 49774.0 48 53186.5 49 55799.0 50 57447.5 51 58408.0 52 57871.0 53 57232.0 54 56896.5 55 55032.5 56 51635.0 57 47315.0 58 43079.5 59 38437.5 60 32900.5 61 27968.5 62 23496.5 63 18185.0 64 13238.0 65 9943.5 66 7539.5 67 5864.0 68 4600.5 69 3415.5 70 2602.5 71 2002.0 72 1469.5 73 1136.0 74 885.5 75 664.5 76 459.0 77 274.0 78 144.0 79 73.5 80 44.0 81 28.0 82 16.5 83 11.0 84 7.5 85 3.5 86 2.0 87 1.5 88 0.5 89 1.0 90 1.5 91 1.5 92 1.0 93 0.5 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.022239678604873192 2 0.002144540436898486 3 0.03280352594218795 4 0.17211922691700074 5 0.02390765450023868 6 0.06918128594587339 7 0.05242209956862966 8 0.044479357209746384 9 0.03431264699037578 10-11 0.0641376445479825 12-13 0.05778345066087588 14-15 0.057505454678314964 16-17 0.04976128087840376 18-19 0.037132320527779344 20-21 0.023748799653061013 22-23 0.0032168106553477293 24-25 0.005520205939423881 26-27 0.003812516332263975 28-29 0.005003927686096468 30-31 0.002501963843048234 32-33 0.00929300855989344 34-35 0.0054010648040406315 36-37 0.007386750393761452 38-39 0.002422536419459401 40-41 0.0036139477732918934 42-43 0.003772802620469559 44-45 0.005440778515835049 46-47 0.005123068821479717 48-49 0.0024622501312538177 50-51 0.0017076896071599056 52-53 0.0010325565066548268 54-55 0.00520249624506855 56-57 8.737016594771611E-4 58-59 8.737016594771611E-4 60-61 1.1914113538324922E-4 62-63 8.339879476827447E-4 64-65 0.0 66-67 0.003812516332263975 68-69 7.545605240939118E-4 70-71 3.971371179441641E-5 72-73 0.0019062581661319876 74-75 0.0059173430573680455 76-77 0.0016679758953654894 78-79 1.9856855897208204E-4 80-81 0.0 82-83 0.006751331005050789 84-85 0.0018665444543375714 86-87 0.0 88-89 9.928427948604102E-4 90-91 8.737016594771611E-4 92-93 0.0 94-95 0.0033359517907309787 96-97 0.0015885484717766563 98-99 7.545605240939118E-4 100-101 0.0 102-103 0.001429693624598991 104-105 0.0 106-107 6.751331005050789E-4 108-109 0.0027402461138147324 110-111 1.1914113538324922E-4 112-113 5.559919651218297E-4 114-115 0.0 116-117 0.0021842541486929027 118-119 0.0030976695199644803 120-121 0.002859387249197982 122-123 0.001429693624598991 124-125 0.10504276769623141 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1259011.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.65860266138354 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3228186266416 48.90934155681088 2 11.153590958448122 13.754296663091056 3 3.755990249351785 6.94767331154438 4 1.8151696986487158 4.476833088478579 5 1.0367282907885422 3.1961608874773013 6 0.6459766630468962 2.389801103720101 7 0.447793696571536 1.9327233527823542 8 0.3269129216604338 1.6125595153226153 9 0.23645310871290676 1.3121431450360241 >10 1.2132529973605204 12.573484439975594 >50 0.03523946638247144 1.415324859652495 >100 0.009427604537284641 0.8712196066775553 >500 2.5828713967999126E-4 0.09109456995538245 >1k 3.8743070951998695E-4 0.5173438994756292 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2744 0.21794885032775727 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2200 0.17474033189543223 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1553 0.12335078883345736 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 7.942742358883282E-5 14-15 0.0 0.0 0.0 3.971371179441641E-5 2.3828227076649845E-4 16-17 0.0 0.0 0.0 1.5885484717766563E-4 3.1770969435533127E-4 18-19 0.0 0.0 0.0 2.7799598256091486E-4 3.1770969435533127E-4 20-21 0.0 0.0 0.0 3.574234061497477E-4 3.574234061497477E-4 22-23 0.0 0.0 0.0 5.162782533274133E-4 5.162782533274133E-4 24-25 0.0 0.0 0.0 0.001072270218449243 6.354193887106625E-4 26-27 0.0 0.0 0.0 0.0024622501312538173 6.354193887106625E-4 28-29 0.0 0.0 0.0 0.006393907598901042 6.354193887106625E-4 30-31 0.0 0.0 0.0 0.019539146202852874 6.354193887106625E-4 32-33 0.0 0.0 0.0 0.0488875792189266 7.942742358883283E-4 34-35 0.0 0.0 0.0 0.08657589171182778 8.737016594771611E-4 36-37 0.0 0.0 0.0 0.1461861731152468 9.134153712715775E-4 38-39 0.0 0.0 0.0 0.22879069364763294 0.0010325565066548266 40-41 0.0 0.0 0.0 0.32029108562196834 0.0010325565066548266 42-43 0.0 0.0 0.0 0.40988521943017175 0.0012311250656269087 44-45 0.0 0.0 0.0 0.5150471282617864 0.0013502662010101579 46-47 0.0 0.0 0.0 0.6329571385794088 0.0013899799128045743 48-49 0.0 0.0 0.0 0.753527967587257 0.0014296936245989907 50-51 0.0 0.0 0.0 0.866354622795194 0.0014296936245989907 52-53 0.0 0.0 0.0 0.9874417300563697 0.0014296936245989907 54-55 0.0 0.0 0.0 1.1240171849173677 0.0014296936245989907 56-57 0.0 0.0 0.0 1.2746910074653837 0.0014296936245989907 58-59 0.0 0.0 0.0 1.4325530118481886 0.0014296936245989907 60-61 0.0 0.0 0.0 1.5883896169294789 0.0014296936245989907 62-63 0.0 0.0 0.0 1.754075222535784 0.0015885484717766565 64-65 0.0 0.0 0.0 1.9233747759153812 0.0015885484717766565 66-67 0.0 0.0 0.0 2.1164231289480395 0.0015885484717766565 68-69 0.0 0.0 0.0 2.330082898402 0.0015885484717766565 70-71 0.0 0.0 0.0 2.5545845111758356 0.0015885484717766565 72-73 0.0 0.0 0.0 2.7682045669180013 0.0019062581661319878 74-75 0.0 0.0 0.0 2.9871462600406193 0.002025399301515237 76-77 0.0 0.0 0.0 3.2404006001536128 0.0021842541486929027 78-79 0.0 0.0 0.0 3.5300724139820856 0.0024622501312538173 80-81 0.0 0.0 0.0 3.8274884016104704 0.002501963843048234 82-83 0.0 0.0 0.0 4.128240341029586 0.0027799598256091486 84-85 0.0 0.0 0.0 4.4368953090957906 0.0027799598256091486 86-87 0.0 7.942742358883282E-5 0.0 4.7775198151565 0.002819673537403565 88-89 0.0 7.942742358883282E-5 0.0 5.1553957828803725 0.003018242096375647 90-91 0.0 7.942742358883282E-5 0.0 5.554200876719902 0.003018242096375647 92-93 0.0 7.942742358883282E-5 0.0 5.952529406017899 0.003018242096375647 94-95 0.0 7.942742358883282E-5 0.0 6.356139858984552 0.0030976695199644803 96-97 0.0 7.942742358883282E-5 0.0 6.815389222175183 0.0032168106553477297 98-99 0.0 7.942742358883282E-5 0.0 7.309507224321313 0.003256524367142146 100-101 0.0 7.942742358883282E-5 0.0 7.840280982453688 0.003256524367142146 102-103 0.0 1.5885484717766563E-4 0.0 8.382015725041322 0.0034153792143198115 104-105 0.0 1.5885484717766563E-4 0.0 8.93097836317554 0.003534520349703061 106-107 0.0 1.5885484717766563E-4 0.0 9.5166364710078 0.003574234061497477 108-109 0.0 1.5885484717766563E-4 0.0 10.160435452907084 0.0036139477732918934 110-111 0.0 1.5885484717766563E-4 0.0 10.840771049657231 0.003772802620469559 112-113 0.0 1.5885484717766563E-4 0.0 11.533735606758004 0.0038125163322639756 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1990 0.0 53.682167 1 GTATCAA 3400 0.0 51.07921 1 TCAACGC 4615 0.0 36.96428 4 CAACGCA 4640 0.0 36.461548 5 TATCAAC 4775 0.0 36.10762 2 ATCAACG 4890 0.0 34.892456 3 AACGCAG 4895 0.0 34.819366 6 GTACATG 6465 0.0 34.709583 1 TACATGG 6615 0.0 33.820168 2 CATGGGG 5610 0.0 32.109383 4 ATGGGGG 3520 0.0 31.30861 5 ACATGGG 6920 0.0 31.294996 3 GTATAGG 305 0.0 29.350904 1 ACGCAGA 5860 0.0 28.77922 7 CGCAGAG 6165 0.0 27.451002 8 TATACCG 160 8.661667E-6 26.062302 5 GCAGAGT 6760 0.0 24.946676 9 CTTACAC 625 0.0 23.863512 3 ATACCGT 200 1.8009905E-6 23.837873 6 GAGTACT 3195 0.0 23.481106 12-13 >>END_MODULE