##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921618_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1856322 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.928609368417764 31.0 31.0 34.0 26.0 34.0 2 30.24288135355827 31.0 31.0 34.0 26.0 34.0 3 30.319466665804747 31.0 31.0 34.0 26.0 34.0 4 33.73758485866137 37.0 35.0 37.0 29.0 37.0 5 33.80628791772117 37.0 35.0 37.0 30.0 37.0 6 33.772848137338244 37.0 35.0 37.0 29.0 37.0 7 33.696142695071224 37.0 35.0 37.0 28.0 37.0 8 33.649635677430965 37.0 35.0 37.0 29.0 37.0 9 35.328495271833226 39.0 37.0 39.0 29.0 39.0 10-11 35.35371314890412 39.0 37.0 39.0 29.0 39.0 12-13 35.28315750176962 39.0 37.0 39.0 28.5 39.0 14-15 36.57508907398609 40.0 38.0 41.0 28.0 41.0 16-17 36.54870491218657 40.0 38.0 41.0 28.0 41.0 18-19 36.52153694240547 40.0 38.0 41.0 27.0 41.0 20-21 36.58035163080543 40.0 38.0 41.0 28.0 41.0 22-23 36.52572263863705 40.0 38.0 41.0 28.0 41.0 24-25 36.52577004420569 40.0 38.0 41.0 28.0 41.0 26-27 36.48852946848661 40.0 38.0 41.0 29.0 41.0 28-29 36.432861863405165 40.0 38.0 41.0 28.5 41.0 30-31 36.336378333069376 40.0 37.0 41.0 28.5 41.0 32-33 36.2345172335403 40.0 37.0 41.0 28.0 41.0 34-35 36.10195402521761 40.0 37.0 41.0 27.0 41.0 36-37 35.996016585484625 40.0 37.0 41.0 27.0 41.0 38-39 35.873973642503834 40.0 36.0 41.0 26.0 41.0 40-41 35.759461451192195 40.0 36.0 41.0 26.0 41.0 42-43 35.529467409210255 40.0 35.5 41.0 25.0 41.0 44-45 35.231199921134376 40.0 35.0 41.0 24.0 41.0 46-47 34.985390465662746 39.5 35.0 41.0 23.5 41.0 48-49 34.7943295936804 39.0 35.0 41.0 23.0 41.0 50-51 34.58857972916337 39.0 35.0 41.0 23.0 41.0 52-53 34.38494075920018 39.0 34.0 40.5 22.0 41.0 54-55 34.143001052619105 38.0 34.0 40.0 20.5 41.0 56-57 33.88765095710765 38.0 34.0 40.0 20.0 41.0 58-59 33.881351672824 38.0 34.0 40.0 20.0 41.0 60-61 33.659901407191214 37.0 34.0 40.0 19.5 41.0 62-63 33.33862524928326 37.0 34.0 40.0 18.0 41.0 64-65 33.03589409595965 36.0 33.0 39.5 17.0 41.0 66-67 32.71037460095824 36.0 33.0 39.0 14.0 41.0 68-69 32.37461361768055 35.0 33.0 39.0 12.5 40.5 70-71 32.01166634883388 35.0 33.0 37.5 9.0 40.0 72-73 31.668527873935666 35.0 32.5 37.0 7.0 39.5 74-75 31.307537970244386 35.0 32.0 37.0 6.5 39.0 76-77 31.010711773065232 35.0 32.0 36.0 2.0 39.0 78-79 30.740470942002517 35.0 32.0 36.0 2.0 37.0 80-81 30.487455840096708 35.0 32.0 35.0 2.0 37.0 82-83 30.267370370011236 35.0 31.0 35.0 2.0 36.5 84-85 30.059855725461425 35.0 31.0 35.0 2.0 36.0 86-87 29.88803074035647 35.0 31.0 35.0 2.0 36.0 88-89 29.729182760318523 35.0 31.0 35.0 2.0 35.5 90-91 29.542816925080885 35.0 31.0 35.0 2.0 35.0 92-93 29.461489439870885 34.0 31.0 35.0 2.0 35.0 94-95 29.332776317901743 34.0 31.0 35.0 2.0 35.0 96-97 29.24695877116147 34.0 30.0 35.0 2.0 35.0 98-99 29.15041194361754 34.0 30.0 35.0 2.0 35.0 100-101 29.039480219487785 34.0 30.0 35.0 2.0 35.0 102-103 28.180762281543828 33.5 28.0 34.5 2.0 35.0 104-105 29.07983501784712 34.0 30.5 35.0 2.0 35.0 106-107 29.33507575733089 35.0 31.0 35.0 2.0 35.0 108-109 29.32567895009594 35.0 31.0 35.0 2.0 35.0 110-111 29.257450485422247 35.0 31.0 35.0 2.0 35.0 112-113 29.172996926179835 35.0 31.0 35.0 2.0 35.0 114-115 29.052211038817617 35.0 31.0 35.0 2.0 35.0 116-117 28.929156148556125 35.0 31.0 35.0 2.0 35.0 118-119 28.636004152296856 35.0 30.0 35.0 2.0 35.0 120-121 28.511585813237144 35.0 30.0 35.0 2.0 35.0 122-123 28.2586097670555 34.0 30.0 35.0 2.0 35.0 124-125 27.502919213369232 34.0 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 74879.0 3 13349.0 4 6628.0 5 5647.0 6 6119.0 7 6913.0 8 6810.0 9 7185.0 10 8034.0 11 8146.0 12 8037.0 13 8137.0 14 8491.0 15 7466.0 16 6530.0 17 5882.0 18 5408.0 19 5117.0 20 4929.0 21 5082.0 22 5996.0 23 8179.0 24 12514.0 25 15946.0 26 17024.0 27 17768.0 28 21300.0 29 25399.0 30 31033.0 31 38081.0 32 50455.0 33 68469.0 34 107029.0 35 177251.0 36 355295.0 37 550144.0 38 145535.0 39 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.2845306784896 17.381244382561313 12.510480497115035 24.82374444183405 2 16.647675386492754 19.43861237046196 38.35899176505766 25.554720477987626 3 19.91388543487209 23.825891693047694 28.098702031967555 28.161520840112665 4 13.862571944703797 15.325306164010488 34.4881480815015 36.32397380978421 5 14.866843142315417 37.596102090067234 31.969930532244884 15.567124235372464 6 33.980119194241745 33.28233893355018 17.569179466494685 15.168362405713387 7 29.731339550563373 32.751660632169504 19.208513303654065 18.308486513613058 8 27.677022356151564 34.47463124665499 18.743293127581353 19.105053269612092 9 28.0659100130779 16.31110629738178 18.061076525902802 37.56190716363752 10-11 26.75587798952479 25.61980130246196 25.85846472263058 21.76585598538267 12-13 26.435286055096878 23.142128878343343 26.20022024960185 24.222364816957924 14-15 24.337469635147574 24.318636421441518 23.610814737218742 27.73307920619217 16-17 24.661889710017192 27.16185670261734 24.30015555242397 23.8760980349415 18-19 24.731270301252124 26.463212662538016 25.551727873353062 23.2537891628568 20-21 25.57364999637608 25.310491605309295 25.315826443174682 23.800031955139943 22-23 25.66052815306485 24.763396017254987 25.152519738442898 24.423556091237266 24-25 25.093172387778196 25.069030554507734 25.12324190332489 24.714555154389178 26-27 24.579928571755797 25.35613740976815 25.385780158060523 24.678153860415534 28-29 24.760305082672144 25.798554136867892 25.24746938919599 24.193671391263972 30-31 25.498329024324796 25.20829269501811 25.19681517748122 24.09656310317588 32-33 25.056325027064574 25.25813055335668 25.144537482749534 24.541006936829213 34-35 24.986782246333654 25.691513528458458 25.203898334589987 24.117805890617902 36-37 25.086012387076757 25.565047238121508 25.19704998793187 24.15189038686987 38-39 25.063729016302023 25.646894641697713 25.121517534572078 24.167858807428182 40-41 24.965763594453406 25.409449086247715 25.287054946938287 24.33773237236059 42-43 24.883619617803028 25.353963668360297 25.048797723769724 24.71361899006695 44-45 24.64588372750228 25.36126877599518 25.432120317231714 24.560727179270835 46-47 24.560232732069306 25.3929428170538 25.33237816482638 24.714446286050517 48-49 24.58098330938516 25.696196699597763 25.29961710764446 24.42320288337262 50-51 24.60305913226692 25.616474157418413 25.403353352139696 24.377113358174974 52-53 24.677144500618997 25.53638615762014 25.165526336705152 24.62094300505571 54-55 24.461192612796882 25.26631886706849 25.438611143740523 24.8338773763941 56-57 24.566100455567916 25.459104097363127 25.058309945142714 24.916485501926243 58-59 24.51647925343621 25.657634552282634 25.2676228602833 24.558263333997857 60-61 24.92238829855591 25.495784060713188 25.4349771145501 24.1468505261808 62-63 24.71054485594934 25.4798388346088 25.309001364598306 24.50061494484356 64-65 24.53702369120742 25.271815634413393 25.264784003659678 24.926376670719506 66-67 24.64323810072938 25.40314465086842 25.179192614109247 24.774424634292952 68-69 24.404997484984673 25.445165795683767 25.349791888206692 24.800044831124872 70-71 24.30045916988316 25.384072068032275 25.498089778909122 24.81737898317545 72-73 24.36136106471254 25.714801444043324 25.12912872460801 24.794708766636134 74-75 24.405927605247264 25.57995699652341 25.245039541971494 24.769075856257835 76-77 24.344753325633977 25.15461345760061 25.31727513935214 25.183358077413274 78-79 24.208724599681116 25.38092058929871 25.471122671059305 24.93923213996087 80-81 24.43263082944024 25.58176875373965 25.20460474154432 24.780995675275793 82-83 24.481102985690274 25.541056844747285 25.329858169002588 24.647982000559857 84-85 24.486768364759747 25.62683114215859 25.04215869772995 24.844241795351714 86-87 24.16999355321721 25.726246380251343 25.238656235073464 24.865103831457983 88-89 24.170406583618867 25.491990587748447 25.31800295170105 25.01959987693163 90-91 24.449446496453213 25.30242657894666 25.349546447689942 24.898580476910187 92-93 24.419259915330848 25.317374631363787 25.427763465121117 24.835601988184248 94-95 24.420364715849473 25.29493926116688 25.356304406680124 24.928391616303518 96-97 24.158087182483655 25.248238643144372 25.38721833982435 25.20645583454762 98-99 24.010064745806176 25.369333395108885 25.240763028625423 25.379838830459512 100-101 23.97090915360108 25.563643230368356 25.397947812004258 25.067499804026312 102-103 23.85292583072119 25.381855246120704 25.5516345330477 25.213584390110405 104-105 23.96726805602432 25.44725746466156 25.398044799956036 25.187429679358075 106-107 23.929250869536293 25.37696516009892 25.534509271237948 25.159274699126843 108-109 23.92931292679924 25.4132791893707 25.470713311866476 25.18669457196358 110-111 23.670779698269943 25.87732553284903 25.47351040648173 24.978384362399293 112-113 23.533276247574776 25.92349772110384 25.503623796411247 25.03960223491014 114-115 23.608508533640506 25.98272367469691 25.40362250049298 25.0051452911696 116-117 23.543241335840236 25.805350687691586 25.43491846288944 25.216489513578743 118-119 23.5102120194314 25.598803972173716 25.574656526900498 25.316327481494387 120-121 23.491941642054567 25.72175063062189 25.623032883918434 25.163274843405105 122-123 23.29365600967081 25.825240207982723 25.58258112339116 25.298522658955303 124-125 23.14799303089191 25.81012639074129 25.535193563518533 25.50668701484826 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 532.0 1 449.0 2 346.5 3 287.5 4 245.5 5 237.0 6 228.0 7 243.0 8 295.5 9 347.0 10 370.0 11 376.5 12 400.5 13 438.5 14 502.0 15 533.5 16 568.0 17 676.5 18 722.5 19 791.0 20 881.0 21 977.0 22 1179.0 23 1399.0 24 1644.0 25 2059.0 26 2800.0 27 3856.5 28 4970.5 29 6359.5 30 8282.0 31 10311.0 32 12788.0 33 15386.0 34 17875.5 35 20705.5 36 24105.5 37 28090.5 38 31856.0 39 35603.0 40 39630.0 41 43362.0 42 46923.0 43 51487.0 44 56758.5 45 61689.5 46 66655.5 47 71526.0 48 77219.0 49 82617.5 50 86870.5 51 88543.0 52 85717.5 53 83499.5 54 82671.5 55 80067.5 56 75866.0 57 69977.0 58 63859.0 59 57121.0 60 48886.5 61 41767.0 62 35132.0 63 27568.5 64 20899.0 65 16053.5 66 12344.5 67 9550.0 68 7399.0 69 5669.5 70 4518.0 71 3597.0 72 2775.0 73 2255.0 74 1775.0 75 1349.5 76 996.5 77 644.5 78 398.5 79 275.0 80 207.0 81 146.5 82 111.5 83 76.5 84 56.5 85 57.0 86 53.0 87 37.0 88 31.5 89 31.0 90 26.5 91 21.0 92 17.0 93 14.5 94 16.0 95 12.5 96 10.5 97 11.0 98 7.5 99 6.0 100 3.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.026611762398980346 2 0.011151082624673951 3 0.010235293230377057 4 0.011258822553414764 5 0.019016097422753165 6 0.10073683337265842 7 0.062219808847818435 8 0.05112259618751488 9 0.027958511508240486 10-11 0.05330432974451631 12-13 0.013252011235119768 14-15 0.030059440118686304 16-17 0.03649690086094977 18-19 0.04487368032054784 20-21 0.032079563782576516 22-23 0.03999844854502613 24-25 0.03350711783839226 26-27 0.04813281316495737 28-29 0.047971203271846154 30-31 0.028012381472610898 32-33 0.030975229512983198 34-35 0.04648977925166 36-37 0.01045077308785868 38-39 0.02246377514245912 40-41 0.04530464003551108 42-43 0.024052939091386085 44-45 0.01769628329567823 46-47 0.024456963824164128 48-49 0.031163774388279622 50-51 0.030544269798019958 52-53 0.02690804720301758 54-55 0.02499566346786818 56-57 0.02728513695361042 58-59 0.01896222745838276 60-61 0.024160679020126894 62-63 0.025022598450053387 64-65 0.022760059946496353 66-67 0.03057120478020516 68-69 0.02523807830753501 70-71 0.048940862630513456 72-73 0.02273312496431115 74-75 0.010396903123488274 76-77 0.017373063509455795 78-79 0.02634241257712832 80-81 0.019689471977383233 82-83 0.026207737666202307 84-85 0.012928791448897336 86-87 0.019258512262419987 88-89 0.023864394216089668 90-91 0.02246377514245912 92-93 0.008403714441783268 94-95 0.011824457179304021 96-97 0.015918574471454845 98-99 0.007541795011856779 100-101 0.011070277678118344 102-103 0.004767491846780892 104-105 0.004982971704262515 106-107 8.888544121116918E-4 108-109 0.015218264934639573 110-111 0.0014544890380009503 112-113 0.002720433200705481 114-115 0.013790710878823826 116-117 0.006033436009485423 118-119 0.2798275299220717 120-121 0.0010504643052229084 122-123 7.541795011856779E-4 124-125 0.31621669085428067 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1856322.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.6890104250401 #Duplication Level Percentage of deduplicated Percentage of total 1 81.34689202321994 50.995561620882455 2 10.02061567476475 12.563649610012954 3 3.3083589026812237 6.221932372198724 4 1.5863158789175875 3.9777829068348516 5 0.9441736521815325 2.959465596232814 6 0.615850907107358 2.316425036155414 7 0.4127719566032806 1.811338584346708 8 0.30005534313132465 1.5048138026918874 9 0.2225096353314719 1.255401796406986 >10 1.182998471286962 12.800868067019003 >50 0.04710195167532242 1.9818779238897828 >100 0.011755237006793916 1.2568321036343737 >500 4.288329232160152E-4 0.20624723214985224 >1k 1.7153316928640588E-4 0.14780334754430224 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 5.386996437040556E-5 5 0.0 0.0 0.0 0.0 5.386996437040556E-5 6 0.0 0.0 0.0 0.0 5.386996437040556E-5 7 0.0 0.0 0.0 0.0 5.386996437040556E-5 8 0.0 0.0 0.0 0.0 5.386996437040556E-5 9 0.0 0.0 0.0 0.0 5.386996437040556E-5 10-11 0.0 0.0 0.0 0.0 1.0773992874081112E-4 12-13 0.0 0.0 0.0 0.0 1.3467491092601392E-4 14-15 0.0 0.0 0.0 0.0 2.6934982185202784E-4 16-17 0.0 0.0 0.0 0.0 3.7708975059283896E-4 18-19 0.0 0.0 0.0 2.693498218520278E-5 4.309597149632445E-4 20-21 0.0 0.0 0.0 5.386996437040556E-5 5.117646615188529E-4 22-23 0.0 0.0 0.0 1.8854487529641945E-4 5.925696080744613E-4 24-25 0.0 0.0 0.0 5.925696080744613E-4 6.464395724448667E-4 26-27 0.0 0.0 0.0 0.001239009180519328 6.464395724448667E-4 28-29 0.0 0.0 0.0 0.003932507399039607 6.464395724448667E-4 30-31 0.0 0.0 0.0 0.013548296039157 7.003095368152723E-4 32-33 0.0 0.0 0.0 0.034288232321763146 8.080494655560835E-4 34-35 0.0 0.0 0.0 0.05976872546896497 8.080494655560835E-4 36-37 0.0 2.693498218520278E-5 0.0 0.0958885365793219 8.080494655560835E-4 38-39 0.0 5.386996437040556E-5 0.0 0.15296376382976662 9.157893942968946E-4 40-41 0.0 5.386996437040556E-5 0.0 0.21876592530821698 9.696593586673002E-4 42-43 0.0 5.386996437040556E-5 0.0 0.2829519878555552 9.965943408525029E-4 44-45 0.0 5.386996437040556E-5 0.0 0.3582621980453822 0.0010773992874081114 46-47 0.0 5.386996437040556E-5 0.0 0.43677767111524834 0.0011582042339637198 48-49 0.0 8.080494655560834E-5 0.0 0.5154816890604108 0.001239009180519328 50-51 0.0 1.0773992874081112E-4 0.0 0.5946166667205366 0.001239009180519328 52-53 0.0 1.0773992874081112E-4 0.0 0.6824516436264829 0.0014544890380009503 54-55 0.0 1.0773992874081112E-4 0.0 0.7830807370704005 0.0016969038776677753 56-57 0.0 1.0773992874081112E-4 0.0 0.8911977555618045 0.0017777088242233836 58-59 0.0 1.0773992874081112E-4 0.0 1.0041361358643597 0.0018315787885937892 60-61 0.0 1.0773992874081112E-4 0.0 1.119471729581398 0.0018315787885937892 62-63 0.0 1.0773992874081112E-4 0.0 1.248167074462297 0.0020470586460754115 64-65 0.0 1.6160989311121669E-4 0.0 1.3752732553942688 0.0020470586460754115 66-67 0.0 1.6160989311121669E-4 0.0 1.5254627160589596 0.0020470586460754115 68-69 0.0 1.6160989311121669E-4 0.0 1.6854834452212493 0.0020470586460754115 70-71 0.0 1.6160989311121669E-4 0.0 1.8531537093241366 0.0020470586460754115 72-73 0.0 1.6160989311121669E-4 0.0 2.007679702120645 0.002235603521371831 74-75 0.0 1.6160989311121669E-4 0.0 2.177854919566756 0.002262538503557034 76-77 0.0 1.6160989311121669E-4 0.0 2.386223941751485 0.002262538503557034 78-79 0.0 1.6160989311121669E-4 0.0 2.6137706712520776 0.002262538503557034 80-81 0.0 1.6160989311121669E-4 0.0 2.8318632220056648 0.002343343450112642 82-83 0.0 1.6160989311121669E-4 0.0 3.057524502753294 0.002478018361038656 84-85 0.0 1.6160989311121669E-4 0.0 3.2991043579723778 0.002478018361038656 86-87 0.0 1.6160989311121669E-4 0.0 3.5749455105310393 0.002478018361038656 88-89 0.0 1.6160989311121669E-4 0.0 3.8940442444791366 0.002478018361038656 90-91 0.0 2.1547985748162225E-4 0.0 4.216429046253829 0.002478018361038656 92-93 0.0 2.1547985748162225E-4 0.0 4.519797750605767 0.002478018361038656 94-95 0.0 2.1547985748162225E-4 0.0 4.834371407546751 0.0026665632363350755 96-97 0.0 2.1547985748162225E-4 0.0 5.1871658042085365 0.0027473681828906835 98-99 0.0 2.1547985748162225E-4 0.0 5.602126139753771 0.002828173129446292 100-101 0.0 2.1547985748162225E-4 0.0 6.043725172680171 0.002855108111631495 102-103 0.0 2.1547985748162225E-4 0.0 6.482388292548383 0.0030975229512983198 104-105 0.0 2.1547985748162225E-4 0.0 6.933064414471197 0.00328606782659474 106-107 0.0 2.1547985748162225E-4 0.0 7.4208838768274035 0.003366872773150348 108-109 0.0 2.1547985748162225E-4 0.0 7.962896523340239 0.0034207427375207533 110-111 0.0 2.1547985748162225E-4 0.0 8.538335482744912 0.003555417648446767 112-113 0.0 2.1547985748162225E-4 0.0 9.103215929132984 0.003555417648446767 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 12630 0.0 33.561676 1 GTATCAA 5200 0.0 33.43078 1 GGTATCA 3855 0.0 32.58555 1 CATGGGG 9940 0.0 32.574223 4 TACATGG 12895 0.0 32.26394 2 ATGGGGG 6120 0.0 31.41069 5 ACATGGG 13095 0.0 31.316645 3 TCAACGC 6075 0.0 27.922873 4 CAACGCA 6140 0.0 27.43118 5 ATCAACG 6385 0.0 26.753618 3 AACGCAG 6420 0.0 26.602024 6 TATCAAC 6535 0.0 26.503847 2 TGGGGGG 4825 0.0 23.556128 6 ATGGGGA 3270 0.0 23.114386 5 GTATAGG 500 0.0 22.62302 1 ACGCAGA 7630 0.0 22.453474 7 GTACCGT 385 9.094947E-12 21.638899 6 TTAACGC 195 4.030339E-5 21.366085 3 TACCGTA 225 5.0885083E-6 21.15062 7 CGCAGAG 8080 0.0 21.12935 8 >>END_MODULE