Basic Statistics
Measure | Value |
---|---|
Filename | SRR2921607_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1187800 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 2430 | 0.0 | 43.101303 | 1 |
AGCCTCG | 855 | 0.0 | 42.45148 | 2 |
TCAACGC | 2925 | 0.0 | 36.209557 | 4 |
CAACGCA | 2940 | 0.0 | 36.02482 | 5 |
GTACATG | 6405 | 0.0 | 35.77055 | 1 |
GGTATCA | 1565 | 0.0 | 35.363285 | 1 |
TACATGG | 6675 | 0.0 | 33.784466 | 2 |
ATCAACG | 3135 | 0.0 | 33.78404 | 3 |
AACGCAG | 3200 | 0.0 | 33.280937 | 6 |
ACATGGG | 6845 | 0.0 | 32.77155 | 3 |
TATCAAC | 3250 | 0.0 | 32.40552 | 2 |
CATGGGG | 5775 | 0.0 | 31.219053 | 4 |
ATGGGGG | 3495 | 0.0 | 30.304136 | 5 |
TACGGTC | 85 | 0.007209478 | 28.000784 | 5 |
ACGCAGA | 3840 | 0.0 | 27.263556 | 7 |
CCTCGGT | 770 | 0.0 | 27.046211 | 4 |
CGGTCTC | 540 | 0.0 | 26.437386 | 7 |
GTATAGG | 230 | 8.265488E-9 | 25.873558 | 1 |
TCGGTCT | 465 | 0.0 | 25.589954 | 6 |
CGCAGAG | 4175 | 0.0 | 25.360893 | 8 |