##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921607_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1187800 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.70377841387439 31.0 30.0 34.0 16.0 34.0 2 28.643034180838526 31.0 30.0 34.0 16.0 34.0 3 28.76445697928944 31.0 30.0 34.0 16.0 34.0 4 32.3281208957737 37.0 33.0 37.0 19.0 37.0 5 32.16581916147499 35.0 33.0 37.0 19.0 37.0 6 32.35495874726385 37.0 35.0 37.0 18.0 37.0 7 32.03892827075265 36.0 33.0 37.0 17.0 37.0 8 32.07794999158107 36.0 33.0 37.0 17.0 37.0 9 33.72280686984341 39.0 35.0 39.0 17.0 39.0 10-11 33.813961104563056 39.0 35.0 39.0 17.0 39.0 12-13 33.75340040410843 39.0 35.0 39.0 16.5 39.0 14-15 34.88253241286412 40.0 36.0 41.0 16.0 41.0 16-17 34.803336841219064 40.0 36.0 41.0 14.5 41.0 18-19 34.701634955379696 40.0 36.0 41.0 12.5 41.0 20-21 34.80283170567436 40.0 36.0 41.0 13.0 41.0 22-23 34.69752357299208 40.0 36.0 41.0 12.5 41.0 24-25 34.69591934669136 40.0 35.5 41.0 12.5 41.0 26-27 34.6899536959084 40.0 35.5 41.0 10.5 41.0 28-29 34.62832000336757 40.0 35.0 41.0 10.0 41.0 30-31 34.511807964303756 40.0 35.0 41.0 9.0 41.0 32-33 34.428505219733964 40.0 35.0 41.0 8.0 41.0 34-35 34.269959168210136 40.0 35.0 41.0 7.5 41.0 36-37 34.14707358141101 40.0 35.0 41.0 2.0 41.0 38-39 34.004173261491836 40.0 35.0 41.0 2.0 41.0 40-41 33.883885755177644 40.0 34.0 41.0 2.0 41.0 42-43 33.54899856878262 39.0 33.5 41.0 2.0 41.0 44-45 33.0403072907897 38.0 33.0 40.0 2.0 41.0 46-47 32.71154697760566 38.0 32.5 40.0 2.0 41.0 48-49 32.47496211483415 38.0 32.0 40.0 2.0 41.0 50-51 32.238632766459006 38.0 32.0 40.0 2.0 41.0 52-53 32.015353173935004 37.5 31.0 40.0 2.0 41.0 54-55 31.769970533759892 37.0 31.0 40.0 2.0 41.0 56-57 31.504108435763598 37.0 31.0 40.0 2.0 41.0 58-59 31.51412022225964 36.5 31.0 40.0 2.0 41.0 60-61 31.309080653308637 36.0 31.0 39.5 2.0 41.0 62-63 31.010858730425998 36.0 30.5 39.0 2.0 41.0 64-65 30.716264101700624 35.0 30.0 39.0 2.0 40.5 66-67 30.405645731604647 35.0 30.0 38.5 2.0 40.0 68-69 30.086564236403433 35.0 30.0 37.5 2.0 40.0 70-71 29.743626873210978 35.0 29.5 37.0 2.0 39.5 72-73 29.418622663748103 35.0 29.0 36.5 2.0 39.0 74-75 29.073450496716617 34.5 29.0 36.0 2.0 39.0 76-77 28.79097617444014 34.0 29.0 35.5 2.0 37.5 78-79 28.5353864286917 34.0 29.0 35.0 2.0 37.0 80-81 28.293368412190603 34.0 29.0 35.0 2.0 37.0 82-83 28.08215061458158 34.0 28.0 35.0 2.0 36.0 84-85 27.883274541168547 34.0 28.0 35.0 2.0 36.0 86-87 27.720711820171744 34.0 27.0 35.0 2.0 35.5 88-89 27.5597225963967 34.0 27.0 35.0 2.0 35.0 90-91 27.38596522983667 34.0 27.0 35.0 2.0 35.0 92-93 27.30879988213504 34.0 27.0 35.0 2.0 35.0 94-95 27.186458157939047 34.0 26.0 35.0 2.0 35.0 96-97 27.104816888365043 34.0 26.0 35.0 2.0 35.0 98-99 27.009363529213672 34.0 25.0 35.0 2.0 35.0 100-101 26.898655076612222 34.0 25.0 35.0 2.0 35.0 102-103 25.9806373126789 31.5 24.5 34.0 2.0 35.0 104-105 26.941980131335242 33.5 26.0 35.0 2.0 35.0 106-107 27.256594544536117 34.0 27.0 35.0 2.0 35.0 108-109 27.267764354268394 34.0 27.0 35.0 2.0 35.0 110-111 27.205095554807208 34.0 27.0 35.0 2.0 35.0 112-113 27.12427639333221 34.0 27.0 35.0 2.0 35.0 114-115 27.010774962114834 34.0 27.0 35.0 2.0 35.0 116-117 26.896839114329012 34.0 25.5 35.0 2.0 35.0 118-119 26.602369085704662 34.0 25.0 35.0 2.0 35.0 120-121 26.456196750294662 34.0 25.0 35.0 2.0 35.0 122-123 26.176536874894765 34.0 24.5 35.0 2.0 35.0 124-125 25.34804259976427 33.0 21.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 83922.0 3 11580.0 4 6100.0 5 5104.0 6 5124.0 7 5474.0 8 5991.0 9 6165.0 10 6380.0 11 6588.0 12 6593.0 13 6678.0 14 6806.0 15 6133.0 16 5315.0 17 4786.0 18 4427.0 19 4063.0 20 4056.0 21 4259.0 22 4859.0 23 6176.0 24 8594.0 25 10701.0 26 12163.0 27 14225.0 28 17079.0 29 20754.0 30 24981.0 31 31512.0 32 41524.0 33 57099.0 34 85155.0 35 132441.0 36 225108.0 37 252645.0 38 47223.0 39 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.681144897392066 17.5478514227009 11.859995115912861 25.91100856399417 2 16.585612695611466 19.933046276541106 37.7022209573911 25.779120070456337 3 21.035920777774127 23.067583735582392 27.55307119576794 28.343424290875536 4 13.743493628765949 14.515417426550204 33.521178227842135 38.21991071684172 5 14.803815406793161 37.17226083398029 32.0375612787406 15.986362480485953 6 34.909005720218296 33.21493458996114 16.966834868724867 14.909224821095707 7 30.293697433685573 31.077558901229242 18.722790193012724 19.90595347207246 8 29.107345318056772 34.14500605637908 18.070163025258218 18.677485600305936 9 28.38309203479011 15.699254882674337 17.622260548530313 38.29539253400524 10-11 27.02376464890021 25.154054310172363 25.785096816990094 22.037084223937327 12-13 26.45986868833583 22.625391272131743 26.254375827539246 24.660364211993187 14-15 24.390923786468885 23.941593360807154 23.26736613039804 28.400116722325926 16-17 25.26321153018521 26.925438348999837 23.82214893127823 23.989201189536725 18-19 25.07875196248206 26.24078559925611 25.102672344669124 23.577790093592707 20-21 25.45796160293614 25.134441938052486 25.210321468980556 24.197274990030813 22-23 25.781908653024168 24.6524312337291 24.948097352101666 24.617562761145066 24-25 25.199849418137532 25.164688384815825 24.93864715503026 24.696815042016382 26-27 24.753943847395913 25.412072986761608 25.216870544772746 24.617112621069733 28-29 24.982206465643948 25.524351241420145 25.186968984079734 24.30647330885617 30-31 25.43285376953316 25.178573233131335 25.131961450750673 24.256611546584832 32-33 24.75744651106581 25.358666721126543 25.251838336694266 24.632048431113375 34-35 24.76995909401218 25.81158145252686 25.184746568601234 24.23371288485973 36-37 25.136347236997704 25.624818712376896 24.99102244745974 24.247811603165655 38-39 25.122376164920883 25.708678623728133 24.989031828328955 24.17991338302203 40-41 24.90073816775376 25.526294067705248 25.112569740175733 24.46039802436526 42-43 24.998210536864203 25.340019048308772 25.041536597257952 24.620233817569076 44-45 24.690063246212258 25.384163269705397 25.37136414274058 24.55440934134177 46-47 24.660955182378302 25.395950536025342 25.360539726423077 24.58255455517328 48-49 24.67294693883051 25.57199546580744 25.213614031068985 24.541443564293065 50-51 24.622664032981977 25.601916397213664 25.26627739672816 24.5091421730762 52-53 24.830881789465618 25.539397195580904 25.10696995241195 24.522751062541527 54-55 24.669665661481304 25.242840264789574 25.203935296490382 24.88355877723874 56-57 24.756901783015 25.465796141923715 25.00048421745827 24.776817857603014 58-59 24.644240675566948 25.577915491819187 25.19844168595332 24.57940214666054 60-61 24.85339021444944 25.484250184841173 25.335029886164783 24.3273297145446 62-63 24.68943524034243 25.525930641659805 25.30336484454078 24.481269273456988 64-65 24.640454519043974 25.2843901810548 25.256264836329862 24.818890463571364 66-67 24.624707195608703 25.4386434003585 25.128059155855944 24.808590248176856 68-69 24.535180904501456 25.426124521580963 25.30014610464798 24.738548469269602 70-71 24.382987719979482 25.403276412909896 25.492982303933665 24.720753563176952 72-73 24.530932240855904 25.581276868081666 25.17959773139708 24.708193159665353 74-75 24.419074594543623 25.643021569892078 25.198034140681703 24.739869694882604 76-77 24.500734678067857 25.31519583696462 25.32631073724628 24.857758747721235 78-79 24.400030990047817 25.360596154202437 25.387586127911423 24.851786727838327 80-81 24.464918843656307 25.570005898681618 25.286397623349178 24.678677634312894 82-83 24.55918223499249 25.510524172817995 25.308794544415676 24.62149904777384 84-85 24.546373089714983 25.568896560434474 25.079400496779353 24.80532985307119 86-87 24.411849653791453 25.66166124527295 25.15184253005484 24.77464657088076 88-89 24.32376558245443 25.450110672426042 25.261354923544026 24.964768821575504 90-91 24.544736858725376 25.384717406544272 25.27065689005097 24.799888844679387 92-93 24.489484906720776 25.497106796974816 25.360582134760744 24.652826161543658 94-95 24.45088856443755 25.397045921090967 25.3605030455203 24.791562468951188 96-97 24.35206590762979 25.367305447155463 25.3443600399629 24.936268605251847 98-99 24.26221005885649 25.393748271372157 25.24000826794542 25.104033401825937 100-101 24.281230726483944 25.459585870684048 25.410035173837908 24.849148228994103 102-103 24.012212946093307 25.404754848638945 25.57183461923156 25.01119758603619 104-105 24.04148358194127 25.549759334269 25.437993107959862 24.97076397582987 106-107 24.079392855383887 25.401596831761857 25.523503954193906 24.995506358660354 108-109 24.077580958748275 25.441790283181952 25.46490391213958 25.015724845930194 110-111 23.88269737936028 25.683742604390957 25.51317265576821 24.920387360480557 112-113 23.832423856292102 25.754133479489518 25.59366476941463 24.819777894803753 114-115 23.858019753626973 25.73524582572013 25.495019492602918 24.91171492804998 116-117 23.672015565945202 25.72220243643078 25.578523912602368 25.027258085021653 118-119 23.809616269400745 25.491682530570554 25.608815124667068 25.089886075361633 120-121 23.619480436930374 25.73000282458169 25.651327069300756 24.99918966918718 122-123 23.630125165117434 25.698628799174266 25.59044478363618 25.08080125207212 124-125 23.470305482883198 25.581974702700144 25.689899489764034 25.257820324652624 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 381.0 1 282.5 2 171.5 3 146.5 4 125.5 5 115.5 6 121.0 7 157.0 8 197.5 9 218.0 10 213.5 11 224.5 12 254.0 13 272.0 14 304.0 15 345.5 16 377.0 17 411.0 18 443.5 19 482.5 20 545.0 21 593.5 22 693.0 23 851.5 24 1017.0 25 1294.0 26 1719.0 27 2370.0 28 3035.5 29 3808.0 30 4925.5 31 6173.0 32 7765.5 33 9482.0 34 11316.5 35 13135.0 36 15256.0 37 17633.5 38 19868.5 39 22253.0 40 24787.0 41 27150.5 42 29570.5 43 33038.0 44 36420.5 45 39637.0 46 42906.5 47 45654.0 48 49055.0 49 52276.0 50 54005.5 51 54914.5 52 54425.5 53 53426.5 54 53261.0 55 51755.5 56 48699.5 57 45131.0 58 41388.0 59 37389.0 60 32322.0 61 27474.0 62 23179.0 63 18385.5 64 13918.5 65 10762.5 66 8315.0 67 6381.0 68 5103.5 69 4090.0 70 3274.0 71 2585.5 72 1986.0 73 1492.0 74 1172.5 75 973.0 76 720.5 77 469.0 78 319.5 79 238.5 80 175.0 81 136.0 82 113.5 83 95.0 84 71.0 85 52.0 86 49.5 87 44.0 88 37.0 89 30.5 90 29.5 91 24.0 92 21.5 93 18.5 94 14.0 95 12.5 96 7.0 97 9.0 98 8.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.022731099511702307 2 0.009597575349385419 3 0.008671493517427176 4 0.009934332379188416 5 0.016332715945445362 6 0.09530223943424819 7 0.06128977942414548 8 0.05236571813436605 9 0.028287590503451757 10-11 0.05367065162485266 12-13 0.014101700623000505 14-15 0.030855362855699616 16-17 0.03763259808048493 18-19 0.04445192793399562 20-21 0.03296009429196835 22-23 0.0404950328338104 24-25 0.034180838525004205 26-27 0.04807206600437784 28-29 0.04807206600437784 30-31 0.027950833473648764 32-33 0.032118201717460854 34-35 0.047609025088398725 36-37 0.009723859235561542 38-39 0.022983667284054553 40-41 0.04512544199360162 42-43 0.02466745243306954 44-45 0.018437447381714094 46-47 0.026056575181006906 48-49 0.03182353931638323 50-51 0.030602795083347366 52-53 0.026687994611887523 54-55 0.024499073918168045 56-57 0.026687994611887523 58-59 0.019742380872200708 60-61 0.024751641690520288 62-63 0.024078127630914298 64-65 0.021805017679744063 66-67 0.03035022731099512 68-69 0.024835830947971038 70-71 0.04941909412358983 72-73 0.023993938373463544 74-75 0.01060784643879441 76-77 0.017258797777403603 78-79 0.02710894089914127 80-81 0.0207526519616097 82-83 0.0268984677555144 84-85 0.012628388617612393 86-87 0.01860582589661559 88-89 0.02412022225963967 90-91 0.02294157265532918 92-93 0.008629398888701801 94-95 0.012965145647415391 96-97 0.016711567603973732 98-99 0.0067772352247853175 100-101 0.010734130324970533 102-103 0.0037043273278329686 104-105 0.004462030644889712 106-107 8.839872032328674E-4 108-109 0.015911769658191615 110-111 0.0014733120053881125 112-113 0.002483583094797104 114-115 0.014312173766627379 116-117 0.006650951338609193 118-119 0.2731941404276814 120-121 0.0011365549755851154 122-123 7.577033170567436E-4 124-125 0.3066172756356289 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1187800.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.20834208902771 #Duplication Level Percentage of deduplicated Percentage of total 1 84.65436770741897 58.58788439625392 2 8.534638990296028 11.81336429693523 3 2.743259698473936 5.695693669530816 4 1.2760169583538203 3.5324407266060733 5 0.7302161801234642 2.52685255964639 6 0.45786162302735406 1.901270630154874 7 0.3135805916914374 1.5191675003582508 8 0.23327409659126383 1.2915610781917666 9 0.16864093287852386 1.0504223435582676 >10 0.8570735307422248 10.164968377791732 >50 0.023924267864805584 1.0897697244424869 >100 0.007024314871319105 0.7828524269689522 >500 1.21107666828687E-4 0.04375226956122524 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 8.418925745074928E-5 9 0.0 0.0 0.0 0.0 1.6837851490149856E-4 10-11 0.0 0.0 0.0 0.0 1.6837851490149856E-4 12-13 0.0 0.0 0.0 0.0 1.6837851490149856E-4 14-15 0.0 0.0 0.0 0.0 2.946624010776225E-4 16-17 0.0 0.0 0.0 0.0 4.209462872537464E-4 18-19 0.0 0.0 0.0 0.0 4.209462872537464E-4 20-21 0.0 0.0 0.0 0.0 4.209462872537464E-4 22-23 0.0 0.0 0.0 8.418925745074928E-5 5.051355447044957E-4 24-25 0.0 0.0 0.0 2.5256777235224784E-4 5.89324802155245E-4 26-27 0.0 0.0 0.0 6.314194308806196E-4 6.314194308806196E-4 28-29 0.0 0.0 0.0 0.0024414884660717293 7.997979457821182E-4 30-31 0.0 0.0 0.0 0.010523657181343661 8.418925745074928E-4 32-33 0.0 0.0 0.0 0.02576191277992928 9.260818319582421E-4 34-35 0.0 0.0 0.0 0.042810237413706015 9.260818319582421E-4 36-37 0.0 0.0 0.0 0.06726721670314867 9.260818319582421E-4 38-39 0.0 0.0 0.0 0.10641522141774709 9.260818319582421E-4 40-41 0.0 0.0 0.0 0.15364539484761744 9.260818319582421E-4 42-43 0.0 0.0 0.0 0.19700286243475332 9.260818319582421E-4 44-45 0.0 0.0 0.0 0.24717965987539992 9.681764606836168E-4 46-47 0.0 0.0 0.0 0.30249200202054216 0.0010102710894089914 48-49 0.0 0.0 0.0 0.3631924566425324 0.0010102710894089914 50-51 0.0 0.0 0.0 0.42401919515069875 0.0010944603468597406 52-53 0.0 0.0 0.0 0.4893500589324802 0.00117864960431049 54-55 0.0 0.0 0.0 0.5595638996464051 0.00117864960431049 56-57 0.0 0.0 0.0 0.6437952517258798 0.00117864960431049 58-59 0.0 0.0 0.0 0.7275635628893753 0.00117864960431049 60-61 0.0 0.0 0.0 0.8140259302912949 0.00117864960431049 62-63 0.0 0.0 0.0 0.9113066172756357 0.0012628388617612393 64-65 0.0 0.0 0.0 1.0087977774036032 0.0012628388617612393 66-67 0.0 0.0 0.0 1.1208115844418252 0.0012628388617612393 68-69 0.0 0.0 0.0 1.2361929617780771 0.0012628388617612393 70-71 0.0 0.0 0.0 1.3590250883987203 0.0012628388617612393 72-73 0.0 0.0 0.0 1.4754167368243811 0.0013470281192119885 74-75 0.0 0.0 0.0 1.6013638659707021 0.0013470281192119885 76-77 0.0 0.0 0.0 1.7527782454958747 0.0013470281192119885 78-79 4.209462872537464E-5 0.0 0.0 1.9205253409664926 0.0013470281192119885 80-81 8.418925745074928E-5 0.0 0.0 2.087851490149857 0.001389122747937363 82-83 8.418925745074928E-5 0.0 0.0 2.2622074423303586 0.0015995958915642364 84-85 8.418925745074928E-5 0.0 0.0 2.4396783970365385 0.0015995958915642364 86-87 8.418925745074928E-5 0.0 0.0 2.645436942246169 0.0015995958915642364 88-89 8.418925745074928E-5 0.0 0.0 2.879062131671999 0.0015995958915642364 90-91 8.418925745074928E-5 0.0 0.0 3.120432732783297 0.0015995958915642364 92-93 8.418925745074928E-5 0.0 0.0 3.352458326317562 0.0015995958915642364 94-95 8.418925745074928E-5 0.0 0.0 3.595091766290621 0.0016837851490149856 96-97 8.418925745074928E-5 0.0 0.0 3.870643205926924 0.0016837851490149856 98-99 8.418925745074928E-5 0.0 0.0 4.187699949486445 0.0016837851490149856 100-101 8.418925745074928E-5 0.0 0.0 4.524625357804345 0.0016837851490149856 102-103 8.418925745074928E-5 0.0 0.0 4.867444014143795 0.001767974406465735 104-105 8.418925745074928E-5 0.0 0.0 5.220702138407139 0.0019363529213672335 106-107 8.418925745074928E-5 4.209462872537464E-5 0.0 5.603510692035696 0.0020205421788179827 108-109 8.418925745074928E-5 8.418925745074928E-5 0.0 6.019531907728574 0.0020626368075433573 110-111 8.418925745074928E-5 8.418925745074928E-5 0.0 6.460557332884324 0.002104731436268732 112-113 8.418925745074928E-5 8.418925745074928E-5 0.0 6.907223438289274 0.002104731436268732 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2430 0.0 43.101303 1 AGCCTCG 855 0.0 42.45148 2 TCAACGC 2925 0.0 36.209557 4 CAACGCA 2940 0.0 36.02482 5 GTACATG 6405 0.0 35.77055 1 GGTATCA 1565 0.0 35.363285 1 TACATGG 6675 0.0 33.784466 2 ATCAACG 3135 0.0 33.78404 3 AACGCAG 3200 0.0 33.280937 6 ACATGGG 6845 0.0 32.77155 3 TATCAAC 3250 0.0 32.40552 2 CATGGGG 5775 0.0 31.219053 4 ATGGGGG 3495 0.0 30.304136 5 TACGGTC 85 0.007209478 28.000784 5 ACGCAGA 3840 0.0 27.263556 7 CCTCGGT 770 0.0 27.046211 4 CGGTCTC 540 0.0 26.437386 7 GTATAGG 230 8.265488E-9 25.873558 1 TCGGTCT 465 0.0 25.589954 6 CGCAGAG 4175 0.0 25.360893 8 >>END_MODULE