##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921605_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1225257 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.20395149752256 31.0 30.0 34.0 23.0 34.0 2 29.234445508166857 31.0 30.0 34.0 22.0 34.0 3 29.390228335769557 31.0 31.0 34.0 23.0 34.0 4 32.77415023950078 37.0 35.0 37.0 24.0 37.0 5 32.85596001491932 37.0 35.0 37.0 25.0 37.0 6 32.64714994486871 37.0 35.0 37.0 23.0 37.0 7 32.54842453460784 37.0 35.0 37.0 22.0 37.0 8 32.593537519067425 37.0 35.0 37.0 22.0 37.0 9 34.17189536562533 39.0 35.0 39.0 19.0 39.0 10-11 34.22633129212892 39.0 35.0 39.0 21.5 39.0 12-13 34.14845130450183 39.0 35.0 39.0 18.5 39.0 14-15 35.314912708109404 40.0 36.0 41.0 18.0 41.0 16-17 35.2583262123783 40.0 36.0 41.0 17.5 41.0 18-19 35.193361882445885 40.0 36.0 41.0 17.5 41.0 20-21 35.244854344843574 40.0 36.0 41.0 18.0 41.0 22-23 35.166342244933105 40.0 36.0 41.0 18.0 41.0 24-25 35.162062326515986 40.0 36.0 41.0 18.0 41.0 26-27 35.12259713676396 40.0 36.0 41.0 18.0 41.0 28-29 35.05065875975407 40.0 36.0 41.0 18.0 41.0 30-31 34.93580530451979 40.0 36.0 41.0 16.5 41.0 32-33 34.83238536894709 40.0 35.0 41.0 16.0 41.0 34-35 34.675857391551325 40.0 35.0 41.0 13.5 41.0 36-37 34.556990084529204 40.0 35.0 41.0 9.0 41.0 38-39 34.42913649952622 40.0 35.0 41.0 9.0 41.0 40-41 34.305940712846365 40.0 35.0 41.0 7.5 41.0 42-43 34.00659698332676 39.5 34.5 41.0 2.0 41.0 44-45 33.559570767602224 39.0 33.5 40.5 2.0 41.0 46-47 33.25789936315402 38.0 33.0 40.0 2.0 41.0 48-49 33.02998677012251 38.0 33.0 40.0 2.0 41.0 50-51 32.808483036620075 38.0 33.0 40.0 2.0 41.0 52-53 32.60084700597507 38.0 32.0 40.0 2.0 41.0 54-55 32.3560644827983 38.0 32.0 40.0 2.0 41.0 56-57 32.10462213233632 37.0 32.0 40.0 2.0 41.0 58-59 32.10947091100071 37.0 32.0 40.0 2.0 41.0 60-61 31.895398271546295 37.0 32.0 40.0 2.0 41.0 62-63 31.593908869731003 36.0 31.0 39.5 2.0 41.0 64-65 31.302361463758217 36.0 31.0 39.0 2.0 41.0 66-67 30.988565664183106 35.0 31.0 39.0 2.0 40.5 68-69 30.661943983996828 35.0 31.0 38.0 2.0 40.0 70-71 30.30416067812712 35.0 30.0 37.5 2.0 40.0 72-73 29.970725325380716 35.0 30.0 37.0 2.0 39.0 74-75 29.615376202706862 35.0 30.0 36.0 2.0 39.0 76-77 29.32601323640673 35.0 30.0 36.0 2.0 38.5 78-79 29.06269092933156 34.5 29.0 35.5 2.0 37.0 80-81 28.804775651149107 34.0 29.0 35.0 2.0 37.0 82-83 28.581055647917132 34.0 29.0 35.0 2.0 36.5 84-85 28.37235453459968 34.0 29.0 35.0 2.0 36.0 86-87 28.201285934297864 34.0 29.0 35.0 2.0 36.0 88-89 28.0372232111304 34.0 29.0 35.0 2.0 35.0 90-91 27.852356689249685 34.0 28.0 35.0 2.0 35.0 92-93 27.75767492044526 34.0 28.0 35.0 2.0 35.0 94-95 27.627547934841424 34.0 27.0 35.0 2.0 35.0 96-97 27.5383058411419 34.0 27.0 35.0 2.0 35.0 98-99 27.43318911869102 34.0 27.0 35.0 2.0 35.0 100-101 27.318684569849427 34.0 27.0 35.0 2.0 35.0 102-103 26.431158932370924 32.5 25.0 34.0 2.0 35.0 104-105 27.367310694817498 34.0 27.0 35.0 2.0 35.0 106-107 27.6589682817564 34.0 29.0 35.0 2.0 35.0 108-109 27.667216347264286 34.0 29.0 35.0 2.0 35.0 110-111 27.602822509889762 34.0 29.0 35.0 2.0 35.0 112-113 27.517676291586174 34.0 28.5 35.0 2.0 35.0 114-115 27.389898609026513 34.0 27.0 35.0 2.0 35.0 116-117 27.25775898444163 34.0 27.0 35.0 2.0 35.0 118-119 26.970318063883738 34.0 27.0 35.0 2.0 35.0 120-121 26.817914527319573 34.0 25.0 35.0 2.0 35.0 122-123 26.528573189135017 34.0 25.0 35.0 2.0 35.0 124-125 25.710777820489906 33.0 22.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 75887.0 3 12212.0 4 6394.0 5 5422.0 6 5764.0 7 5806.0 8 5865.0 9 6152.0 10 6541.0 11 6648.0 12 6674.0 13 6881.0 14 7112.0 15 6333.0 16 5195.0 17 4802.0 18 4447.0 19 4133.0 20 4062.0 21 4197.0 22 4558.0 23 6185.0 24 8754.0 25 10427.0 26 11763.0 27 13515.0 28 15971.0 29 19213.0 30 23464.0 31 29735.0 32 38953.0 33 52825.0 34 81201.0 35 128303.0 36 231196.0 37 293560.0 38 65072.0 39 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.40745433290447 18.056707528131717 12.123495451250335 25.41234268771348 2 16.32849460785754 19.911828757440112 37.83356025062117 25.926116384081183 3 19.955336117752015 23.730544234955527 28.825834529784494 27.488285117507967 4 13.56861483910885 15.393179736742866 33.92663866383047 37.111566760317814 5 14.3783503160225 38.026040939667986 32.99800582986619 14.597602914443325 6 33.86583662165143 33.80121402253213 16.54003578343668 15.792913572379764 7 29.41083275895298 32.34866574983585 19.96589650700526 18.274604984205904 8 28.375998164333023 34.57455886423822 18.73221391399639 18.317229057432368 9 28.18529225197748 16.305812874157393 18.07115409263796 37.43774078122717 10-11 26.56954059876171 25.92389804294321 26.020297339363086 21.48626401893199 12-13 26.080337672737098 23.625827132095846 26.36794884300479 23.92588635216227 14-15 24.074584321682952 24.833261286370963 23.715002626754693 27.3771517651914 16-17 24.451875958308772 27.663139056215886 24.285605814433865 23.59937917104148 18-19 24.317867178789367 27.05342055423075 25.691624891351523 22.937087375628366 20-21 25.026553860045443 25.689971743917106 25.858438739163127 23.42503565687433 22-23 25.33415307540035 25.185676885274077 25.448378090515362 24.03179194881021 24-25 24.794444385480357 25.621606219858577 25.421336962618312 24.162612432042753 26-27 24.26527266076141 25.900281871390867 25.802745551461943 24.031699916385776 28-29 24.52717182509532 26.006090578057833 25.73177368591022 23.734963910936628 30-31 25.018113302123346 25.609576395683504 25.552226109523946 23.820084192669206 32-33 24.37355724779518 25.93710773978516 25.60205245852119 24.08728255389847 34-35 24.455899572297135 26.146460877190975 25.763259360389064 23.634380190122826 36-37 24.67113855114861 26.055760340076528 25.570304031552414 23.70279707722245 38-39 24.696996289750487 26.212157699890206 25.459903590656214 23.6309424197031 40-41 24.546058766181275 26.05967251236611 25.493583012579222 23.90068570887339 42-43 24.39969354564182 25.83008599742771 25.476610405815286 24.293610051115184 44-45 24.302759737609424 25.8860498071906 25.739728532199656 24.071461923000317 46-47 24.24093006017374 25.868461892007282 25.712047727545468 24.17856032027351 48-49 24.176138624975763 26.13117531201845 25.71130001734853 23.981386045657256 50-51 24.190758818595025 26.08520304760194 25.68953728781388 24.034500845989154 52-53 24.256875101790243 26.02719876108774 25.501869266836767 24.21405687028525 54-55 24.03579192616303 25.781305486098017 25.674364004313578 24.508538583425377 56-57 24.12032426078012 25.972904795336916 25.38675363691283 24.52001730697014 58-59 24.1215641217682 26.129102697275382 25.558015807743878 24.19131737321255 60-61 24.494227557189717 26.013789860550318 25.566590854543588 23.92539172771638 62-63 24.28258476428616 25.940543057975685 25.703598576455516 24.073273601282644 64-65 24.095272186714155 25.72752308069703 25.598257299720693 24.57894743286812 66-67 24.211084473874667 25.97793195898256 25.42690446148992 24.38407910565286 68-69 24.00125554812676 25.87049568027769 25.555547392043675 24.572701379551873 70-71 23.929560915224705 25.831556651187555 25.76096568764744 24.477916745940306 72-73 24.141292102728208 26.137283874022433 25.396945256249083 24.324478767000276 74-75 23.823846782974652 26.06077845924296 25.627317085911955 24.488057671870433 76-77 23.803805879260636 25.73466269186941 25.724867189311144 24.736664239558813 78-79 23.900319649483585 25.753804996263067 25.739885896032895 24.605989458220453 80-81 24.09854238638516 26.025374362457303 25.48538141542641 24.390701835731125 82-83 24.051398645642422 25.948887083804443 25.72095662218812 24.278757648365016 84-85 24.07185051983554 25.919537931220255 25.387499295975264 24.621112252968942 86-87 23.821642064568163 26.091380544655607 25.583556661015113 24.503420729761125 88-89 23.827224944967973 25.789193762941657 25.751070333645316 24.632510958445053 90-91 24.05454253058599 25.63806695407061 25.71472070361448 24.59266981172892 92-93 24.228167513840113 25.60538381956532 25.82225478052732 24.344193886067245 94-95 24.08675174780937 25.582052150631984 25.749588810754997 24.581607290803646 96-97 23.77041017482366 25.571990991483702 25.809203281790406 24.84839555190223 98-99 23.68469918170306 25.672673877387275 25.6536968648751 24.988930076034563 100-101 23.66783198803063 25.895641839580712 25.76904271965274 24.66748345273592 102-103 23.40277055111073 25.856150896888895 25.820320231470994 24.92075832052938 104-105 23.37109290830618 25.935514622823224 25.744934737611903 24.948457731258692 106-107 23.387137582391752 25.85733943606335 25.936670573371508 24.81885240817339 108-109 23.249965206027255 25.849248429781678 25.96540519979087 24.935381164400194 110-111 23.23094935239245 26.32303617126597 25.804811381928687 24.64120309441289 112-113 23.078238371571054 26.415326102037984 25.83029308782841 24.676142438562557 114-115 23.162082211639714 26.514470051800615 25.69525958262386 24.628188153935817 116-117 22.989334619675983 26.336886283555298 25.82296137952087 24.850817717247846 118-119 22.94913038798704 26.021245223671517 25.941689198673572 25.087935189667864 120-121 22.895831471453974 26.364089335930373 25.95478193872958 24.785297253886075 122-123 22.84037422658452 26.22352880684466 25.956847884548996 24.97924908202183 124-125 22.652485341274133 26.157602334752365 25.992009802095435 25.197902521878067 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1163.0 1 881.5 2 475.0 3 297.5 4 216.0 5 187.0 6 204.0 7 248.5 8 305.0 9 355.5 10 358.0 11 348.0 12 383.0 13 416.5 14 459.0 15 496.5 16 542.0 17 620.5 18 707.0 19 769.5 20 846.0 21 971.0 22 1077.0 23 1213.5 24 1463.5 25 1804.0 26 2377.0 27 3156.5 28 3834.5 29 4842.0 30 6251.0 31 7859.0 32 9831.0 33 11930.5 34 14280.5 35 16493.0 36 18999.0 37 21820.0 38 24089.5 39 26157.0 40 28108.0 41 30089.0 42 32050.0 43 34993.0 44 38117.5 45 40661.5 46 43669.5 47 46848.5 48 50010.5 49 52566.5 50 54733.0 51 55288.5 52 53837.5 53 52947.0 54 52761.0 55 51362.5 56 48252.0 57 44485.5 58 41114.0 59 36834.5 60 31295.5 61 26205.5 62 21448.0 63 16486.0 64 12227.5 65 9366.0 66 7204.5 67 5499.0 68 4228.5 69 3309.5 70 2637.5 71 1990.5 72 1477.0 73 1208.5 74 965.0 75 729.0 76 516.0 77 339.0 78 244.5 79 176.5 80 134.5 81 108.5 82 91.5 83 67.0 84 55.0 85 50.5 86 42.5 87 39.0 88 36.5 89 32.5 90 24.0 91 23.0 92 23.5 93 20.5 94 20.0 95 16.5 96 11.5 97 8.0 98 8.0 99 7.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.024892736789098122 2 0.011507789794304378 3 0.008651246228342298 4 0.011671020855216497 5 0.015180488664827052 6 0.10014225586958492 7 0.06113003231158851 8 0.05174424630914168 9 0.027586049294148082 10-11 0.0541110966923674 12-13 0.013507370290477834 14-15 0.029504014259865482 16-17 0.036155679992034326 18-19 0.044929349516060715 20-21 0.03166682581695106 22-23 0.03929787791459261 24-25 0.033135905365160125 26-27 0.047745085316794764 28-29 0.04721458436883038 30-31 0.026810701754815522 32-33 0.03138117146035485 34-35 0.04692893001223417 36-37 0.009875479185183191 38-39 0.022199424284048162 40-41 0.043990770915816026 42-43 0.02272992523201255 44-45 0.017384107987140657 46-47 0.024811121258642065 48-49 0.030156938503513957 50-51 0.029340783198953363 52-53 0.02542323773706251 54-55 0.023505272771345113 56-57 0.02587212315457084 58-59 0.01832268658738534 60-61 0.02440304360636177 62-63 0.023382849475661025 64-65 0.021342461214259537 66-67 0.0296672453207776 68-69 0.02399496595408147 70-71 0.048642856151811416 72-73 0.02260750193632846 74-75 0.009712248124271072 76-77 0.01673118374349218 78-79 0.0262393930416231 80-81 0.01966934283991032 82-83 0.02628020080685113 84-85 0.012895253812057389 86-87 0.01844510988306943 88-89 0.023546080536573144 90-91 0.021872962162223925 92-93 0.00852882293265821 94-95 0.012405560629321032 96-97 0.01583341290847553 98-99 0.007386205506273378 100-101 0.010610018959287724 102-103 0.004039968757574941 104-105 0.003999160992346911 106-107 0.0010610018959287724 108-109 0.015384527490967201 110-111 0.0013466562525249804 112-113 0.002203619322313604 114-115 0.0142827178298104 116-117 0.006366011375572635 118-119 0.2837363916304906 120-121 0.0013466562525249804 122-123 8.161553045605942E-4 124-125 0.31711714358701887 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1225257.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.96397815206662 #Duplication Level Percentage of deduplicated Percentage of total 1 84.13002857881628 57.1781142426341 2 9.038863959674956 12.286343053497022 3 2.7803057419417607 5.668819161041856 4 1.2428534658058348 3.3787706318499215 5 0.7116672768329358 2.4183869627107195 6 0.44779685148075776 1.8260433258361464 7 0.30332645333227554 1.443069071305304 8 0.23277236881693592 1.2656108950943221 9 0.18245118879205702 1.1160097747993751 >10 0.8872920635946638 10.548375939559538 >50 0.03317293311623222 1.523550848840679 >100 0.008749950633600732 0.9563751773112006 >500 5.993059680967582E-4 0.2758318064142725 >1k 1.1986119361935163E-4 0.11469910910552147 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1408 0.11491466688213167 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 8.161553045605942E-5 0.0 12-13 0.0 0.0 0.0 8.161553045605942E-5 0.0 14-15 0.0 0.0 0.0 8.161553045605942E-5 2.0403882614014856E-4 16-17 0.0 0.0 0.0 8.161553045605942E-5 2.448465913681783E-4 18-19 0.0 0.0 0.0 1.6323106091211884E-4 2.448465913681783E-4 20-21 0.0 0.0 0.0 2.8565435659620795E-4 2.448465913681783E-4 22-23 0.0 0.0 0.0 4.080776522802971E-4 2.8565435659620795E-4 24-25 0.0 0.0 0.0 9.793863654727131E-4 3.264621218242377E-4 26-27 0.0 0.0 0.0 0.0024484659136817825 3.264621218242377E-4 28-29 0.0 0.0 0.0 0.006529242436484754 3.264621218242377E-4 30-31 0.0 0.0 0.0 0.02256669417110043 3.264621218242377E-4 32-33 0.0 0.0 0.0 0.052397170552790154 3.264621218242377E-4 34-35 0.0 0.0 0.0 0.09087889316282216 3.264621218242377E-4 36-37 0.0 0.0 0.0 0.14870349649094028 4.080776522802971E-4 38-39 0.0 0.0 0.0 0.23297153168682164 4.080776522802971E-4 40-41 0.0 0.0 0.0 0.32340153943213545 4.080776522802971E-4 42-43 0.0 0.0 0.0 0.40979157841987435 4.4888541750832684E-4 44-45 0.0 0.0 0.0 0.5127903778554214 4.896931827363566E-4 46-47 0.0 0.0 0.0 0.6266032350763961 4.896931827363566E-4 48-49 0.0 0.0 0.0 0.7413954786628438 4.896931827363566E-4 50-51 0.0 0.0 0.0 0.8497400953432628 4.896931827363566E-4 52-53 0.0 0.0 0.0 0.9626143739639929 5.305009479643863E-4 54-55 0.0 0.0 0.0 1.0927503372761795 6.121164784204456E-4 56-57 0.0 0.0 0.0 1.238842136792526 6.529242436484753E-4 58-59 0.0 0.0 0.0 1.3930138738240223 6.937320088765051E-4 60-61 0.0 0.0 0.0 1.5420438324367867 7.345397741045348E-4 62-63 0.0 0.0 0.0 1.690461674571131 7.345397741045348E-4 64-65 0.0 0.0 0.0 1.843409178645786 7.345397741045348E-4 66-67 0.0 0.0 0.0 2.0249629261452906 8.161553045605942E-4 68-69 0.0 0.0 0.0 2.2283896358070185 8.977708350166537E-4 70-71 0.0 0.0 0.0 2.449404492282027 8.977708350166537E-4 72-73 0.0 0.0 0.0 2.653810588309228 0.0010610018959287726 74-75 0.0 0.0 0.0 2.8642154258249493 0.0010610018959287726 76-77 0.0 0.0 0.0 3.1100822113238284 0.0010610018959287726 78-79 0.0 0.0 0.0 3.3825964675166107 0.0010610018959287726 80-81 0.0 0.0 0.0 3.657273535266479 0.0010610018959287726 82-83 0.0 0.0 0.0 3.9375004590873592 0.001142617426384832 84-85 0.0 0.0 0.0 4.221563312839674 0.001142617426384832 86-87 0.0 0.0 0.0 4.54929047538598 0.001142617426384832 88-89 0.0 0.0 0.0 4.913254933454777 0.001142617426384832 90-91 0.0 0.0 0.0 5.289053643439702 0.001142617426384832 92-93 0.0 0.0 0.0 5.671095941504517 0.001142617426384832 94-95 0.0 8.161553045605942E-5 0.0 6.055382666656873 0.0012242329568408913 96-97 0.0 8.161553045605942E-5 0.0 6.474355992253054 0.0012242329568408913 98-99 0.0 1.2242329568408911E-4 0.0 6.945971334993393 0.0012242329568408913 100-101 0.0 1.6323106091211884E-4 0.0 7.451212276281629 0.0012242329568408913 102-103 0.0 1.6323106091211884E-4 0.0 7.964614770615471 0.0013058484872969507 104-105 0.0 1.6323106091211884E-4 0.0 8.500706382416098 0.0013058484872969507 106-107 0.0 1.6323106091211884E-4 0.0 9.061690731005822 0.0013058484872969507 108-109 0.0 1.6323106091211884E-4 0.0 9.665604848615434 0.0013466562525249804 110-111 0.0 1.6323106091211884E-4 0.0 10.309102498496234 0.0014690795482090696 112-113 0.0 1.6323106091211884E-4 0.0 10.952110455194298 0.0014690795482090696 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3475 0.0 36.49757 1 GTACATG 7760 0.0 32.9181 1 TACATGG 7985 0.0 31.683195 2 CATGGGG 6200 0.0 31.29975 4 ATGGGGG 3685 0.0 30.853952 5 TCAACGC 4105 0.0 30.162346 4 CAACGCA 4165 0.0 29.727835 5 ACATGGG 8435 0.0 29.42835 3 GGTATCA 2440 0.0 29.284014 1 AACGCAG 4415 0.0 28.31068 6 ATCAACG 4415 0.0 28.044493 3 TATCAAC 4525 0.0 27.625849 2 ACGCAGA 5135 0.0 24.329191 7 GTACACT 955 0.0 23.686188 4 TACACTG 1290 0.0 23.07253 5 CGCAGAG 5435 0.0 22.767359 8 GTCTCGT 475 0.0 22.543833 9 GGTCTCG 505 0.0 22.382627 8 AGTACAC 995 0.0 22.135717 3 GTACCGT 190 3.297364E-5 21.92836 6 >>END_MODULE