##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921602_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1487308 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.83937556982145 33.0 31.0 34.0 30.0 34.0 2 32.00535396837777 33.0 31.0 34.0 30.0 34.0 3 32.08232592038771 34.0 31.0 34.0 30.0 34.0 4 35.503566174591946 37.0 35.0 37.0 35.0 37.0 5 35.382948925172194 37.0 35.0 37.0 33.0 37.0 6 35.420714472052865 37.0 36.0 37.0 33.0 37.0 7 35.30895281945636 37.0 35.0 37.0 33.0 37.0 8 35.34508319729336 37.0 36.0 37.0 33.0 37.0 9 37.068368488571295 39.0 38.0 39.0 34.0 39.0 10-11 37.02662427688145 39.0 38.0 39.0 34.0 39.0 12-13 36.971951001406566 39.0 38.0 39.0 34.0 39.0 14-15 38.413599940294816 41.0 39.0 41.0 34.0 41.0 16-17 38.418059339423976 41.0 39.0 41.0 34.0 41.0 18-19 38.41833567761351 41.0 39.0 41.0 34.0 41.0 20-21 38.349290799215765 41.0 39.0 41.0 34.0 41.0 22-23 38.36325125663279 41.0 39.0 41.0 34.0 41.0 24-25 38.327224757750244 41.0 39.0 41.0 34.0 41.0 26-27 38.26171647029398 41.0 39.0 41.0 34.0 41.0 28-29 38.19562760369742 41.0 39.0 41.0 34.0 41.0 30-31 38.09382690068231 41.0 38.5 41.0 34.0 41.0 32-33 37.996176649355746 41.0 38.0 41.0 33.0 41.0 34-35 37.8760213082966 41.0 38.0 41.0 33.0 41.0 36-37 37.81189605649939 40.5 38.0 41.0 33.0 41.0 38-39 37.735203804457456 40.0 38.0 41.0 33.0 41.0 40-41 37.62079475132252 40.0 38.0 41.0 33.0 41.0 42-43 37.4779413544471 40.0 38.0 41.0 32.5 41.0 44-45 37.3469963854158 40.0 37.5 41.0 32.0 41.0 46-47 37.179056052949356 40.0 37.0 41.0 32.0 41.0 48-49 37.01718473913944 40.0 37.0 41.0 31.0 41.0 50-51 36.78052427607463 40.0 36.5 41.0 31.0 41.0 52-53 36.65513666301801 40.0 36.0 41.0 31.0 41.0 54-55 36.529729215468485 40.0 35.5 41.0 31.0 41.0 56-57 36.328093777482536 39.0 35.0 41.0 31.0 41.0 58-59 36.12901329112732 39.0 35.0 41.0 30.5 41.0 60-61 35.86654579952505 39.0 35.0 41.0 30.0 41.0 62-63 35.50766619960358 37.5 35.0 40.5 29.5 41.0 64-65 35.216452476554956 37.0 35.0 40.0 29.0 41.0 66-67 34.90820663910905 37.0 35.0 39.5 29.0 41.0 68-69 34.532525878970596 36.0 35.0 39.0 29.0 41.0 70-71 34.16006805584317 35.5 35.0 39.0 29.0 41.0 72-73 33.83763248768916 35.0 34.5 37.5 29.0 40.0 74-75 33.514953862952396 35.0 34.0 37.0 29.0 39.0 76-77 33.191722561836556 35.0 34.0 36.5 28.0 39.0 78-79 32.93352083092405 35.0 34.0 36.0 28.0 38.0 80-81 32.68724668999293 35.0 34.0 36.0 27.5 37.0 82-83 32.47326713767424 35.0 34.0 35.0 27.0 37.0 84-85 32.26759285904467 35.0 34.0 35.0 26.5 36.0 86-87 32.14784395700151 35.0 34.0 35.0 27.0 36.0 88-89 32.060236010295114 35.0 34.0 35.0 27.0 36.0 90-91 31.962540374959325 35.0 34.0 35.0 26.0 35.5 92-93 31.88556338028169 35.0 34.0 35.0 26.0 35.0 94-95 31.820722405850034 35.0 34.0 35.0 26.0 35.0 96-97 31.757652416311885 35.0 33.5 35.0 25.0 35.0 98-99 31.685938285815716 35.0 33.0 35.0 25.0 35.0 100-101 31.62290157788434 35.0 33.0 35.0 25.0 35.0 102-103 30.93006290559857 34.0 31.5 35.0 24.0 35.0 104-105 31.449528611424128 35.0 33.0 35.0 25.0 35.0 106-107 31.550661329058947 35.0 33.0 35.0 25.0 35.0 108-109 31.541127997697856 35.0 33.0 35.0 25.0 35.0 110-111 31.473931425098232 35.0 33.0 35.0 25.0 35.0 112-113 31.435174825927113 35.0 33.0 35.0 25.0 35.0 114-115 31.312816847619995 35.0 33.0 35.0 24.0 35.0 116-117 31.502282983753197 35.0 33.5 35.0 25.0 35.0 118-119 31.486522293970047 35.0 34.0 35.0 25.0 35.0 120-121 31.41193014493299 35.0 34.0 35.0 25.0 35.0 122-123 31.277983443913435 35.0 34.0 35.0 24.0 35.0 124-125 30.628555080723025 34.5 32.5 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 19576.0 3 5287.0 4 2867.0 5 2377.0 6 2517.0 7 2765.0 8 3037.0 9 3394.0 10 3527.0 11 3883.0 12 4077.0 13 4900.0 14 6079.0 15 5436.0 16 3721.0 17 3352.0 18 3084.0 19 2861.0 20 2794.0 21 2982.0 22 3374.0 23 4059.0 24 5277.0 25 6686.0 26 8752.0 27 10187.0 28 13065.0 29 15278.0 30 18701.0 31 23761.0 32 30936.0 33 42052.0 34 66321.0 35 117399.0 36 273583.0 37 564172.0 38 194941.0 39 248.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.10290691731184 17.391737102336617 11.04378399608322 27.461571984268318 2 16.095379228177 19.030797077088167 37.66852867374355 27.205295020991283 3 19.305223668290438 22.748235047250358 27.915274197355917 30.031267087103288 4 13.546721227015185 14.351185549409735 33.57865734938266 38.523435874192415 5 14.919502353732348 37.08850033624748 32.50665770006725 15.485339609952925 6 35.92812920918178 32.99998519848163 16.115758638367957 14.956126953968624 7 31.359577870206117 31.049667116699865 18.651487968507094 18.93926704458692 8 28.70959735412402 34.75523831112181 17.88495390097875 18.65021043377541 9 28.222816773336127 15.34722054079939 17.795170415567014 38.63479227029746 10-11 27.55198044197293 24.630789428628034 25.733114870780927 22.08411525861811 12-13 27.21705389331125 21.684232407294665 26.40801178060573 24.690701918788356 14-15 24.46605226981393 23.187578056755523 23.600595627913513 28.74577404551703 16-17 25.033784851874696 26.405829896550078 24.2579272480464 24.302458003528827 18-19 24.99933581988915 25.642766607781635 25.75653477562987 23.601362796699345 20-21 25.50363756925101 24.666741090342718 25.736592642009114 24.093028698397156 22-23 25.464675641475615 24.12480820615435 25.632902881378953 24.77761327099109 24-25 24.94755406973695 24.61657318291661 25.59078995673883 24.845082790607606 26-27 24.683689630398874 24.84065555208535 25.750950317882047 24.724704499633724 28-29 24.80563080644977 25.276265475741422 25.451925604825558 24.46617811298325 30-31 25.335907161974035 24.79740680713128 25.451924437823852 24.414761593070832 32-33 24.94489593097299 24.74102096173579 25.539172638795687 24.774910468495534 34-35 24.93855251200962 24.95297514768073 25.689168331657413 24.419304008652237 36-37 24.93049945250143 24.965195094063176 25.656216621834655 24.448088831600735 38-39 25.014254228194055 25.089458729302795 25.560587865886543 24.33569917661661 40-41 25.038972478051193 24.81463489251261 25.59159666973157 24.554795959704627 42-43 24.890587609588888 24.728746697793195 25.542288082202003 24.83837761041591 44-45 24.7156485418667 24.87544074812203 25.605280639895 24.80363007011627 46-47 24.694511169122826 24.90049571439858 25.51606239042258 24.888930726056017 48-49 24.644307901052695 25.13049859928534 25.409464884303624 24.81572861535834 50-51 24.75075439323117 25.160896880765527 25.47210089774139 24.616247828261912 52-53 24.911450159954494 25.078061020723485 25.273986786777098 24.736502032544923 54-55 24.581970776196144 24.777264562397693 25.56697897759383 25.073785683812332 56-57 24.656886755568223 25.013573248983644 25.296670040788666 25.032869954659464 58-59 24.695530389138163 25.079548537466728 25.445782776098557 24.779138297296544 60-61 25.038752992410096 24.95470833309521 25.507587719932268 24.49895095456243 62-63 24.88261395615593 24.999100715494286 25.513356980313567 24.604928348036214 64-65 24.730292827811333 24.70228920381293 25.517386283603088 25.05003168477265 66-67 24.645041780060883 25.02577739825618 25.3458642698533 24.98331655182963 68-69 24.516833059178182 24.98183785143043 25.513675316253348 24.98765377313804 70-71 24.497287884314442 24.88012734421093 25.6476216249834 24.974963146491227 72-73 24.662300725490326 25.160797972123422 25.2651838603616 24.91171744202465 74-75 24.479375913401395 25.078274738364186 25.401997472481554 25.04035187575287 76-77 24.53430943255156 24.781572810239897 25.392755435171775 25.291362322036765 78-79 24.42262198317696 24.868260085100204 25.51234430317107 25.196773628551767 80-81 24.583139470775386 25.091406756367878 25.25862161704233 25.0668321558144 82-83 24.61208938358916 25.11238170545857 25.314065304604767 24.961463606347504 84-85 24.523291480701037 25.16984001688987 25.097795845038128 25.209072657370964 86-87 24.249987225241846 25.2687069524268 25.297551011626375 25.18375481070498 88-89 24.17260309893531 25.01248920011968 25.37741589540673 25.437491805538283 90-91 24.44801840650225 24.867133440753904 25.393624220525712 25.291223932218138 92-93 24.464132513238685 25.012606669230582 25.396051120547998 25.12720969698274 94-95 24.37253994914158 24.860986535024672 25.389103226995037 25.377370288838712 96-97 24.103335596958225 24.843339227722904 25.481614211081897 25.571710964236967 98-99 24.03649843860992 24.915744775839922 25.33657545754999 25.711181328000166 100-101 24.061996573675394 24.955792613231424 25.391277395132683 25.590933417960503 102-103 23.87791457799153 24.861148137900802 25.579234397676576 25.681702886431097 104-105 24.106909933920882 24.890540493293926 25.39319360885573 25.609355963929463 106-107 24.02026355803686 24.721668553194192 25.50994234184686 25.74812554692209 108-109 24.044981593854533 24.701349784000943 25.46724714662722 25.786421475517308 110-111 23.865643116840328 25.05957913881292 25.42076873813922 25.654009006207527 112-113 23.776157245699096 25.065168294557328 25.468045179764985 25.690629279978594 114-115 23.81967958217128 25.09745795759856 25.374367649471395 25.708494810758765 116-117 23.60233767927777 24.976551264147403 25.473193808592427 25.9479172479824 118-119 23.66307508698795 24.85391067556437 25.46721352809669 26.015800709350994 120-121 23.51871512492999 24.917718535870684 25.616312539795988 25.947253799403335 122-123 23.41815749087688 25.03384505737775 25.434741316855963 26.113256134889408 124-125 23.32571577406842 24.94488739057821 25.44676463491745 26.28263220043592 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 6.5 2 9.0 3 22.5 4 26.5 5 24.5 6 73.0 7 193.0 8 352.0 9 417.5 10 362.5 11 306.0 12 296.5 13 333.5 14 355.5 15 371.5 16 380.0 17 431.0 18 494.5 19 502.5 20 507.5 21 545.5 22 609.5 23 694.5 24 825.0 25 975.5 26 1267.5 27 1748.5 28 2328.0 29 3155.5 30 4386.5 31 5981.5 32 7905.0 33 9906.5 34 12103.0 35 14537.5 36 17497.0 37 20733.5 38 24016.5 39 27445.0 40 30604.5 41 33587.5 42 36817.0 43 41236.5 44 45896.5 45 50559.5 46 54844.0 47 58469.0 48 63047.0 49 66806.5 50 69026.5 51 70560.5 52 71031.5 53 70726.5 54 70206.5 55 68195.5 56 64249.5 57 59167.5 58 53917.0 59 48515.5 60 41803.5 61 35395.0 62 29258.0 63 22498.5 64 16550.0 65 12380.0 66 9428.5 67 7331.5 68 5836.0 69 4466.5 70 3394.0 71 2552.5 72 1849.5 73 1464.0 74 1162.0 75 850.0 76 612.5 77 389.0 78 219.0 79 116.0 80 68.0 81 34.5 82 20.0 83 9.5 84 6.5 85 5.5 86 5.5 87 3.0 88 1.5 89 1.0 90 0.5 91 0.5 92 0.0 93 0.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.025011631753476753 2 0.0016136536615146294 3 0.029650886030331308 4 0.16600462042831746 5 0.020708555322771074 6 0.06548744442980203 7 0.05049391249156193 8 0.04148434621477192 9 0.031735188676454376 10-11 0.057788971752992656 12-13 0.05358674867613165 14-15 0.05442719329150385 16-17 0.04672872061469446 18-19 0.03445822923026031 20-21 0.021918795568907044 22-23 0.002286009353812391 24-25 0.0041686052922461254 26-27 0.002857511692265489 28-29 0.00410136972301635 30-31 0.0019834492922783985 32-33 0.0082027394460327 34-35 0.004202223076861013 36-37 0.006017583446064971 38-39 0.0020170670768932864 40-41 0.002723040553805937 42-43 0.0030256006153399294 44-45 0.004303076430705678 46-47 0.00406775193840146 48-49 0.0021179204307379506 50-51 0.0013447113845955242 52-53 6.723556922977621E-4 54-55 0.004134987507631237 56-57 5.042667692233216E-4 58-59 5.715023384530978E-4 60-61 2.3532449230421676E-4 62-63 9.749157538317552E-4 64-65 3.361778461488811E-5 66-67 0.00373157409225258 68-69 7.732090461424265E-4 70-71 3.361778461488811E-5 72-73 0.0025549516307314963 74-75 0.005277992184537433 76-77 0.001848978153818846 78-79 1.6808892307444053E-4 80-81 0.0 82-83 0.005210756615307656 84-85 0.0017481247999741817 86-87 0.0 88-89 0.001546418092284853 90-91 5.042667692233216E-4 92-93 0.0 94-95 0.002823893907650601 96-97 0.0012102402461359719 98-99 7.732090461424265E-4 100-101 0.0 102-103 0.0014455647384401886 104-105 0.0 106-107 5.042667692233216E-4 108-109 0.0022187737845826153 110-111 3.361778461488811E-5 112-113 3.3617784614888105E-4 114-115 0.0 116-117 0.0014119469538253005 118-119 0.0022187737845826153 120-121 0.0023532449230421674 122-123 0.0010421513230615314 124-125 0.09994567366006235 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1487308.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.15120637619751 #Duplication Level Percentage of deduplicated Percentage of total 1 80.17768826297231 49.83140049998421 2 10.912684199082525 13.564729755508953 3 3.4903110257563728 6.5078112263670596 4 1.683129034227832 4.184339998562559 5 0.9832950769715881 3.05564876287801 6 0.6011539255615748 2.241746501486322 7 0.41912368622218393 1.8234329903683324 8 0.3083749328684327 1.5332699275161612 9 0.22442781362054143 1.2553613424800154 >10 1.1353181260218084 12.300058297080113 >50 0.050821948139167294 2.096053990802282 >100 0.01312946564593153 1.2919697413746998 >500 3.255017458321596E-4 0.14255636515563794 >1k 2.1700116388810643E-4 0.1716206004357136 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 1.3447113845955244E-4 10-11 0.0 0.0 0.0 0.0 1.3447113845955244E-4 12-13 0.0 0.0 0.0 0.0 2.0170670768932864E-4 14-15 0.0 0.0 0.0 0.0 3.0256006153399297E-4 16-17 0.0 0.0 0.0 6.723556922977622E-5 4.034134153786573E-4 18-19 0.0 0.0 0.0 1.3447113845955244E-4 4.7064898460843347E-4 20-21 0.0 6.723556922977622E-5 0.0 2.3532449230421676E-4 6.387379076828741E-4 22-23 0.0 6.723556922977622E-5 0.0 3.6979563076376914E-4 8.404446153722027E-4 24-25 0.0 6.723556922977622E-5 0.0 8.740623999870908E-4 9.412979692168669E-4 26-27 0.0 6.723556922977622E-5 0.0 0.0013447113845955244 0.0010085335384466432 28-29 0.0 6.723556922977622E-5 0.0 0.0030928361845697057 0.0010085335384466432 30-31 0.0 6.723556922977622E-5 0.0 0.010085335384466432 0.0010085335384466432 32-33 0.0 6.723556922977622E-5 0.0 0.027264023322674254 0.0010421513230615314 34-35 0.0 6.723556922977622E-5 0.0 0.04676233839930936 0.0012102402461359719 36-37 0.0 1.0085335384466432E-4 0.0 0.07876646935268283 0.0012102402461359719 38-39 0.0 1.3447113845955244E-4 0.0 0.1311429777826785 0.0012102402461359719 40-41 0.0 1.3447113845955244E-4 0.0 0.19353758602791082 0.0012102402461359719 42-43 0.0 1.3447113845955244E-4 0.0 0.25095676215013973 0.00124385803075086 44-45 0.0 1.3447113845955244E-4 0.0 0.3148305529184271 0.001311093599980636 46-47 0.0 1.3447113845955244E-4 0.0 0.3797464950097761 0.0013447113845955242 48-49 0.0 1.3447113845955244E-4 0.0 0.451554082947177 0.0014791825230550768 50-51 0.0 1.3447113845955244E-4 0.0 0.5252778846076267 0.0014791825230550768 52-53 0.0 1.3447113845955244E-4 0.0 0.6004136332219017 0.0015464180922848529 54-55 0.0 1.6808892307444055E-4 0.0 0.6855674816514131 0.0017145070153592934 56-57 0.0 2.0170670768932864E-4 0.0 0.7788568339577276 0.0017481247999741815 58-59 0.0 2.0170670768932864E-4 0.0 0.8839796464484828 0.0017481247999741815 60-61 0.0 2.0170670768932864E-4 0.0 0.9955234558006816 0.0017481247999741815 62-63 0.0 2.0170670768932864E-4 0.0 1.1114711949374305 0.0018825959384337339 64-65 3.361778461488811E-5 2.0170670768932864E-4 0.0 1.2250993069357525 0.0019834492922783985 66-67 6.723556922977622E-5 2.0170670768932864E-4 0.0 1.3557044001645928 0.0020170670768932864 68-69 6.723556922977622E-5 2.0170670768932864E-4 0.0 1.5032528568393366 0.0020170670768932864 70-71 6.723556922977622E-5 2.0170670768932864E-4 0.0 1.6643156629292655 0.0020170670768932864 72-73 6.723556922977622E-5 2.0170670768932864E-4 0.0 1.8169740228654723 0.0020170670768932864 74-75 6.723556922977622E-5 2.0170670768932864E-4 0.0 1.9694642938786049 0.0020506848615081744 76-77 6.723556922977622E-5 2.0170670768932864E-4 0.0 2.149050499291337 0.0020843026461230627 78-79 6.723556922977622E-5 2.0170670768932864E-4 0.0 2.347361810734562 0.002151538215352839 80-81 6.723556922977622E-5 2.0170670768932864E-4 0.0 2.5462110067316255 0.0022187737845826153 82-83 6.723556922977622E-5 2.0170670768932864E-4 0.0 2.752624204267038 0.0025549516307314963 84-85 6.723556922977622E-5 2.0170670768932864E-4 0.0 2.967643554663862 0.0025549516307314963 86-87 6.723556922977622E-5 2.0170670768932864E-4 0.0 3.2074055945372444 0.002723040553805937 88-89 6.723556922977622E-5 2.0170670768932864E-4 0.0 3.485727233363903 0.0028911294768803773 90-91 6.723556922977622E-5 2.3532449230421676E-4 0.0 3.780925000067236 0.0028911294768803773 92-93 6.723556922977622E-5 2.689422769191049E-4 0.0 4.063650568678445 0.0030928361845697057 94-95 6.723556922977622E-5 2.689422769191049E-4 0.0 4.351822218397265 0.0032273073230292583 96-97 6.723556922977622E-5 2.689422769191049E-4 0.0 4.674653804054036 0.0033281606768739225 98-99 6.723556922977622E-5 2.689422769191049E-4 0.0 5.035742428602549 0.0034290140307185867 100-101 6.723556922977622E-5 2.689422769191049E-4 0.0 5.420027324535335 0.0034290140307185867 102-103 6.723556922977622E-5 2.689422769191049E-4 0.0 5.815439707175649 0.003529867384563251 104-105 6.723556922977622E-5 2.689422769191049E-4 0.0 6.224668999292682 0.0035634851691781393 106-107 6.723556922977622E-5 2.689422769191049E-4 0.0 6.665734333440014 0.0035634851691781393 108-109 6.723556922977622E-5 2.689422769191049E-4 0.0 7.147712511463665 0.0035971029537930277 110-111 6.723556922977622E-5 2.689422769191049E-4 0.0 7.65688747724076 0.0037651918768674677 112-113 6.723556922977622E-5 2.689422769191049E-4 0.0 8.176450338463855 0.0038996630153270203 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1905 0.0 50.414906 1 GTATCAA 3070 0.0 44.496433 1 GTACATG 7620 0.0 35.540943 1 TCAACGC 3840 0.0 34.939632 4 CAACGCA 3865 0.0 34.672733 5 TACATGG 7830 0.0 34.353394 2 ATCAACG 4090 0.0 32.809486 3 ACATGGG 8150 0.0 32.7839 3 AACGCAG 4130 0.0 32.754036 6 TATCAAC 4170 0.0 32.32416 2 GTATAGG 460 0.0 31.123001 1 CATGGGG 7130 0.0 30.4424 4 ATGGGGG 4280 0.0 26.996845 5 ACGCAGA 5105 0.0 26.497477 7 CGCAGAG 5405 0.0 24.914827 8 GCAGAGT 6255 0.0 21.62511 9 GTATCGA 140 0.0031291142 21.281475 9 AGAGTAC 5530 0.0 20.958214 10-11 ATGGGGA 2740 0.0 20.650385 5 TGGGGGG 2980 0.0 20.597286 6 >>END_MODULE