##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921596_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2033466 Sequences flagged as poor quality 0 Sequence length 125 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.830585315908895 31.0 31.0 34.0 26.0 34.0 2 29.877031137968377 31.0 31.0 34.0 26.0 34.0 3 30.024753302981214 31.0 31.0 34.0 26.0 34.0 4 33.471619884473114 37.0 35.0 37.0 28.0 37.0 5 33.51977215257103 37.0 35.0 37.0 28.0 37.0 6 33.35513305853159 37.0 35.0 37.0 27.0 37.0 7 33.257576964650504 37.0 35.0 37.0 27.0 37.0 8 33.3076933668918 37.0 35.0 37.0 27.0 37.0 9 34.96035734061942 39.0 37.0 39.0 27.0 39.0 10-11 35.00122967386718 39.0 37.0 39.0 27.0 39.0 12-13 34.94578517663929 39.0 37.0 39.0 27.0 39.0 14-15 36.212374094280406 40.0 38.0 41.0 27.0 41.0 16-17 36.17205057768362 40.0 38.0 41.0 27.0 41.0 18-19 36.119553265213185 40.0 38.0 41.0 27.0 41.0 20-21 36.16483604840209 40.0 38.0 41.0 27.0 41.0 22-23 36.07679744829764 40.0 38.0 41.0 26.5 41.0 24-25 36.06958832849922 40.0 37.5 41.0 26.5 41.0 26-27 36.033564613325225 40.0 37.5 41.0 26.5 41.0 28-29 35.97292701230313 40.0 37.0 41.0 26.0 41.0 30-31 35.87298828699373 40.0 37.0 41.0 25.0 41.0 32-33 35.78439816549675 40.0 37.0 41.0 25.0 41.0 34-35 35.66017331983913 40.0 37.0 41.0 24.5 41.0 36-37 35.550162874619005 40.0 37.0 41.0 24.0 41.0 38-39 35.43779291121662 40.0 36.0 41.0 24.0 41.0 40-41 35.3286354431301 40.0 36.0 41.0 23.0 41.0 42-43 35.04847118171634 40.0 35.5 41.0 21.0 41.0 44-45 34.639941361202986 39.5 35.0 41.0 18.5 41.0 46-47 34.363325720715274 39.0 35.0 41.0 16.0 41.0 48-49 34.160508953678104 39.0 34.5 41.0 15.0 41.0 50-51 33.95142333336284 39.0 34.0 40.0 13.0 41.0 52-53 33.74342772389605 38.0 34.0 40.0 9.5 41.0 54-55 33.500144826616236 38.0 33.5 40.0 8.0 41.0 56-57 33.24786227062562 38.0 33.0 40.0 7.5 41.0 58-59 33.262886126446176 38.0 33.0 40.0 7.0 41.0 60-61 33.05458537295436 37.0 33.0 40.0 3.5 41.0 62-63 32.75519212025183 37.0 33.0 40.0 2.0 41.0 64-65 32.46052134631216 36.0 33.0 39.5 2.0 41.0 66-67 32.13459236594071 36.0 32.5 39.0 2.0 41.0 68-69 31.805483838923294 35.0 32.0 39.0 2.0 40.5 70-71 31.44698190183657 35.0 32.0 38.0 2.0 40.0 72-73 31.101474772629587 35.0 32.0 37.0 2.0 39.5 74-75 30.74581896132023 35.0 31.0 37.0 2.0 39.0 76-77 30.45484188080843 35.0 31.0 36.0 2.0 39.0 78-79 30.18704345191904 35.0 31.0 36.0 2.0 37.5 80-81 29.929178801120845 35.0 31.0 35.0 2.0 37.0 82-83 29.708777033891888 35.0 31.0 35.0 2.0 36.5 84-85 29.493780323841165 34.5 30.5 35.0 2.0 36.0 86-87 29.32912721432274 34.0 30.0 35.0 2.0 36.0 88-89 29.169662290886592 34.0 30.0 35.0 2.0 35.5 90-91 28.986936835924475 34.0 30.0 35.0 2.0 35.0 92-93 28.9103156875994 34.0 30.0 35.0 2.0 35.0 94-95 28.792837696819127 34.0 30.0 35.0 2.0 35.0 96-97 28.709464038247994 34.0 29.5 35.0 2.0 35.0 98-99 28.621800659563526 34.0 29.0 35.0 2.0 35.0 100-101 28.511796607368897 34.0 29.0 35.0 2.0 35.0 102-103 27.621539529060236 32.5 28.0 34.5 2.0 35.0 104-105 28.55344618498662 34.0 29.5 35.0 2.0 35.0 106-107 28.843044584959866 34.0 30.0 35.0 2.0 35.0 108-109 28.854024606263394 34.0 30.0 35.0 2.0 35.0 110-111 28.793895988425675 34.0 30.0 35.0 2.0 35.0 112-113 28.718394603106223 34.0 30.0 35.0 2.0 35.0 114-115 28.609582358396942 34.0 30.0 35.0 2.0 35.0 116-117 28.491999374467042 34.0 30.0 35.0 2.0 35.0 118-119 28.209388797255524 34.0 29.5 35.0 2.0 35.0 120-121 28.084179917441453 34.0 29.0 35.0 2.0 35.0 122-123 27.84325678422949 34.0 29.0 35.0 2.0 35.0 124-125 27.062527723600986 33.5 27.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 103232.0 3 17456.0 4 8070.0 5 6912.0 6 7045.0 7 7667.0 8 7777.0 9 8290.0 10 8755.0 11 9055.0 12 9531.0 13 9304.0 14 9445.0 15 8144.0 16 6996.0 17 6426.0 18 5936.0 19 5790.0 20 5609.0 21 5901.0 22 6565.0 23 8576.0 24 12161.0 25 15148.0 26 17444.0 27 19957.0 28 23811.0 29 28741.0 30 34489.0 31 43778.0 32 57166.0 33 79376.0 34 121156.0 35 201024.0 36 392316.0 37 568667.0 38 145692.0 39 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.64340701665672 17.80648068259963 12.02965762784232 25.520454672901334 2 16.189325318543155 19.083178039396216 38.610818884726406 26.116677757334227 3 19.69505159689209 23.206453472302144 28.79520691381632 28.30328801698945 4 13.289387032218054 14.741798676889436 34.81572997566936 37.153084315223154 5 14.407624571408054 37.164965415070796 33.85038987049895 14.577020143022196 6 34.29579094001191 33.933854112828996 16.357989141402953 15.41236580575614 7 29.893197457996166 31.060373821198617 20.599235824244495 18.447192896560715 8 28.247930427937067 34.69973061736595 18.76256196415612 18.289776990540858 9 27.606880617285956 15.67588945638716 18.342672213425264 38.37455771290163 10-11 26.447068640906945 25.28106403701418 26.623287962741777 21.648579359337102 12-13 26.193676074982903 22.630864356316096 26.982168604063528 24.193290964637477 14-15 23.919622857674128 24.0870219465961 24.026221102074338 27.96713409365544 16-17 24.574555406248702 27.173552369194777 24.54420208522888 23.707690139327646 18-19 24.44881596318806 26.517322751163963 25.817898884754342 23.215962400893634 20-21 24.87789148391178 25.527874291072074 25.89866407454068 23.695570150475472 22-23 25.218100804807097 25.063549701598053 25.4918552577139 24.226494235880946 24-25 24.70514850676627 25.553361540690368 25.520746476663014 24.22074347588035 26-27 24.350283305875635 25.76072418457772 25.728153787378776 24.16083872216787 28-29 24.52433572805465 25.611603492403052 25.84057965310161 24.023481126440696 30-31 24.80417272939239 25.537455101396322 25.618570190376964 24.039801978834323 32-33 24.2860979849885 25.844581133211538 25.649755367116576 24.21956551468338 34-35 24.422951369738666 26.02132011113183 25.628757304280704 23.926971214848802 36-37 24.741725261237974 25.70550175420994 25.538035998006148 24.014736986545934 38-39 24.604032071428552 25.89673661089672 25.47836978846049 24.020861529214233 40-41 24.49458976183735 25.79876870865941 25.57690798622343 24.129733543279812 42-43 24.64110084297124 25.58262163441733 25.55409219190969 24.222185330701738 44-45 24.43602929802251 25.60827482475709 25.740683038493067 24.215012838727336 46-47 24.351140363325488 25.63136061246339 25.848997808871303 24.16850121533982 48-49 24.35703252592432 25.841015525078216 25.63743334448358 24.164518604513884 50-51 24.25366599930148 25.958152759399272 25.583436225631743 24.204745015667505 52-53 24.467091894582698 25.778069198981377 25.54077844549962 24.214060460936302 54-55 24.334689880202983 25.621962433973174 25.643138239643715 24.400209446180128 56-57 24.325385240291116 25.757906301749774 25.532319405662644 24.384389052296463 58-59 24.350070053654925 25.675543736622853 25.67342872369545 24.30095748602677 60-61 24.536148904563742 25.81240346683194 25.63815187557182 24.013295753032494 62-63 24.33946444904686 25.899407793592736 25.57028672785239 24.190841029508007 64-65 24.266700507664147 25.691244182963715 25.638293843151892 24.403761466220242 66-67 24.332544629022024 25.791836172504883 25.550748449236792 24.3248707492363 68-69 24.300999422520896 25.761126310518485 25.59422796356471 24.34364630339591 70-71 24.20472685398502 25.72630613578838 25.72320649487932 24.34576051534728 72-73 24.356702234775092 25.867818067969473 25.455988462376556 24.319491234878882 74-75 24.27547841380486 25.9636086069852 25.484819787773844 24.2760931914361 76-77 24.3163303826248 25.71343902436025 25.53961814987009 24.43061244314486 78-79 24.296161151789736 25.74824496831068 25.59715840183222 24.35843547806736 80-81 24.32608307506307 26.006098145815432 25.41106411611562 24.25675466300588 82-83 24.385791021869803 25.826979645242847 25.57483250858363 24.212396824303717 84-85 24.35834474597537 25.865944717153784 25.38753594398186 24.388174592888987 86-87 24.240195957876924 25.924799197280983 25.5486722181507 24.28633262669139 88-89 24.22631641986625 25.74489586866212 25.58601623080932 24.442771480662305 90-91 24.317675292779732 25.73131603191913 25.59604882015019 24.354959855150952 92-93 24.384776414562396 25.803992562849015 25.596055290265042 24.215175732323548 94-95 24.364398704021344 25.64166313162053 25.6721567470198 24.321781417338325 96-97 24.35507107018682 25.53866425724658 25.655159456031118 24.45110521653548 98-99 24.263184530059593 25.67197049541364 25.44323027810306 24.621614696423716 100-101 24.219603584515497 25.72522599951654 25.641074823478032 24.414095592489936 102-103 24.062730066554245 25.637891411291253 25.75120034189396 24.548178180260543 104-105 24.022916602118745 25.81275053814524 25.57282898907382 24.591503870662194 106-107 24.056362409159814 25.682221940817257 25.708704060468733 24.552711589554193 108-109 24.03004197909161 25.750692888638593 25.650454589050025 24.568810543219772 110-111 23.908568281180077 25.97212591532534 25.670861549205036 24.44844425428955 112-113 23.90657757490008 25.999073477101753 25.691904579944318 24.402444368053843 114-115 23.910160327861192 26.107656611387842 25.64603926612408 24.33614379462688 116-117 23.834960588098603 26.038215589432617 25.634813784759746 24.49201003770903 118-119 23.871787322830258 25.87867956545732 25.687584544136044 24.561948567576376 120-121 23.794893433075618 26.075412582763057 25.73581572708914 24.39387825707219 122-123 23.786992287728108 26.159490225343905 25.581039097394942 24.472478389533048 124-125 23.740277141248896 26.15955280893001 25.65174664895294 24.44842340086816 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 752.0 1 595.0 2 376.5 3 276.5 4 200.5 5 148.5 6 157.5 7 216.0 8 290.5 9 320.5 10 291.5 11 307.0 12 332.0 13 364.5 14 427.0 15 462.0 16 506.5 17 559.0 18 608.0 19 668.5 20 753.0 21 888.0 22 1083.0 23 1285.0 24 1506.0 25 1892.0 26 2570.0 27 3492.5 28 4670.0 29 6325.5 30 8703.0 31 11357.0 32 14845.5 33 18678.5 34 22603.5 35 27004.0 36 31957.0 37 36926.5 38 41033.0 39 45489.0 40 49628.0 41 53393.0 42 57115.0 43 61719.0 44 67132.0 45 71978.5 46 76933.5 47 81348.0 48 85511.0 49 88819.5 50 91395.5 51 92774.0 52 90103.5 53 87485.5 54 86341.0 55 83383.5 56 77832.0 57 70730.5 58 64382.0 59 57631.0 60 50034.5 61 42999.0 62 36199.0 63 28460.5 64 20976.5 65 15830.0 66 12231.5 67 9445.0 68 7242.5 69 5527.0 70 4368.5 71 3372.0 72 2542.0 73 2011.5 74 1547.5 75 1156.0 76 864.5 77 567.0 78 392.0 79 294.5 80 211.5 81 156.5 82 123.0 83 103.5 84 90.0 85 86.5 86 66.0 87 54.0 88 54.5 89 47.0 90 38.0 91 30.5 92 30.5 93 31.5 94 22.0 95 16.5 96 21.0 97 17.5 98 10.0 99 6.0 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.026162227448110763 2 0.011064851834257372 3 0.010032132329726684 4 0.011163206072784104 5 0.017457877338494965 6 0.09323981812334212 7 0.05955349142793634 8 0.0511933811531641 9 0.027883426622328577 10-11 0.05190644938248291 12-13 0.013892536191900923 14-15 0.029481682998387975 16-17 0.036366479695259225 18-19 0.04251361960317999 20-21 0.0316208876863444 22-23 0.03958758100700971 24-25 0.03260443007161172 26-27 0.04649696626351264 28-29 0.04622649210756413 30-31 0.027145769833378085 32-33 0.030686522420340444 34-35 0.04548883531861364 36-37 0.010548492081992027 38-39 0.02171169815477613 40-41 0.04349716198844731 42-43 0.023531251567520676 44-45 0.01767917437518011 46-47 0.0243672625949979 48-49 0.03078487665886718 50-51 0.029309563080966192 52-53 0.025424570659160272 54-55 0.02387549140236424 56-57 0.02687529567742957 58-59 0.018761070998974165 60-61 0.02390007996199592 62-63 0.023383720209730577 64-65 0.021096984163984055 66-67 0.029309563080966192 68-69 0.024195142677576116 70-71 0.04782474848362353 72-73 0.022867360457465236 74-75 0.010351783604938563 76-77 0.016646454870649422 78-79 0.025842576172898882 80-81 0.01912989939344941 82-83 0.025867164732530566 84-85 0.013154879402950431 86-87 0.018490596843025654 88-89 0.023629605806047407 90-91 0.02227723502630484 92-93 0.00789292764177026 94-95 0.012466399733263304 96-97 0.016474334953227643 98-99 0.007622453485821744 100-101 0.010843554797572224 102-103 0.00427840937591285 104-105 0.004573472091493047 106-107 9.097767063722728E-4 108-109 0.015294084090906854 110-111 0.0017703762934811796 112-113 0.0028030957980118673 114-115 0.014187598907481119 116-117 0.006565145421659374 118-119 0.27927686029665605 120-121 0.0012540165412158355 122-123 9.097767063722728E-4 124-125 0.3153728658359668 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 2033466.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.60763799984078 #Duplication Level Percentage of deduplicated Percentage of total 1 81.74834935825223 51.180710637059725 2 9.893538867584043 12.388221999181129 3 3.218611604954619 6.045290106752559 4 1.538637316472225 3.853217924909581 5 0.8814413808691878 2.759248144576895 6 0.5671525047695725 2.130484722558982 7 0.3933574030656247 1.7239024526983064 8 0.27724353845401695 1.3886050474659224 9 0.22028030361154038 1.2412106556305706 >10 1.1894060684052716 13.29383117715264 >50 0.05660163874053188 2.3565811304515605 >100 0.014831269241786838 1.3749917361132482 >500 3.9196112809412957E-4 0.1589685679860299 >1k 1.5678445123764096E-4 0.10473569746284937 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.83542385267322E-5 2 0.0 0.0 0.0 4.91771192633661E-5 9.83542385267322E-5 3 0.0 0.0 0.0 4.91771192633661E-5 9.83542385267322E-5 4 0.0 0.0 0.0 4.91771192633661E-5 9.83542385267322E-5 5 0.0 0.0 0.0 4.91771192633661E-5 9.83542385267322E-5 6 0.0 0.0 0.0 4.91771192633661E-5 9.83542385267322E-5 7 0.0 0.0 0.0 4.91771192633661E-5 9.83542385267322E-5 8 0.0 0.0 0.0 4.91771192633661E-5 9.83542385267322E-5 9 0.0 0.0 0.0 4.91771192633661E-5 2.458855963168305E-4 10-11 0.0 0.0 0.0 4.91771192633661E-5 2.458855963168305E-4 12-13 0.0 0.0 0.0 4.91771192633661E-5 3.196512752118796E-4 14-15 0.0 0.0 0.0 4.91771192633661E-5 4.180055137386118E-4 16-17 0.0 0.0 0.0 9.83542385267322E-5 4.91771192633661E-4 18-19 0.0 0.0 0.0 1.4753135779009828E-4 4.91771192633661E-4 20-21 0.0 0.0 0.0 1.4753135779009828E-4 5.409483118970271E-4 22-23 0.0 0.0 0.0 3.934169541069287E-4 6.147139907920762E-4 24-25 0.0 0.0 0.0 8.360110274772236E-4 6.884796696871253E-4 26-27 0.0 4.91771192633661E-5 0.0 0.0013523707797425677 7.376567889504915E-4 28-29 0.0 4.91771192633661E-5 0.0 0.0033686326695405774 7.376567889504915E-4 30-31 0.0 4.91771192633661E-5 0.0 0.012048394219524694 7.622453485821746E-4 32-33 0.0 4.91771192633661E-5 0.0 0.027490009668221647 8.851881467405897E-4 34-35 0.0 4.91771192633661E-5 0.0 0.04870993663036412 9.343652660039558E-4 36-37 0.0 4.91771192633661E-5 0.0 0.08165860653681939 9.343652660039558E-4 38-39 0.0 4.91771192633661E-5 0.0 0.1353354322127835 9.343652660039558E-4 40-41 0.0 4.91771192633661E-5 0.0 0.19749531096167822 9.83542385267322E-4 42-43 0.0 4.91771192633661E-5 0.0 0.25564725449060866 9.83542385267322E-4 44-45 0.0 4.91771192633661E-5 0.0 0.3211020002301489 0.0010081309448990048 46-47 0.0 4.91771192633661E-5 0.0 0.3936382511436139 0.001032719504530688 48-49 0.0 4.91771192633661E-5 0.0 0.46996114024035807 0.0010818966237940541 50-51 0.0 4.91771192633661E-5 0.0 0.550882089988227 0.0010818966237940541 52-53 0.0 4.91771192633661E-5 0.0 0.6299097206444563 0.0012048394219524691 54-55 0.0 4.91771192633661E-5 0.0 0.7120600983739094 0.0012786051008475184 56-57 0.0 4.91771192633661E-5 0.0 0.8054474478550415 0.0012786051008475184 58-59 0.0 4.91771192633661E-5 0.0 0.9084489241521618 0.0012786051008475184 60-61 0.0 4.91771192633661E-5 0.0 1.014401027605084 0.0012786051008475184 62-63 0.0 4.91771192633661E-5 0.0 1.1275329904704579 0.0014261364586376168 64-65 0.0 4.91771192633661E-5 0.0 1.2367307837947623 0.0014261364586376168 66-67 0.0 4.91771192633661E-5 0.0 1.3662633159344686 0.0014261364586376168 68-69 0.0 4.91771192633661E-5 0.0 1.5041805469085787 0.0014507250182692998 70-71 0.0 4.91771192633661E-5 0.0 1.6562607882305382 0.0016474334953227642 72-73 0.0 4.91771192633661E-5 0.0 1.812201433414672 0.001967084770534644 74-75 0.0 4.91771192633661E-5 0.0 1.9717811854242953 0.00201626188979801 76-77 0.0 4.91771192633661E-5 0.0 2.1467041986440885 0.00201626188979801 78-79 0.0 4.91771192633661E-5 0.0 2.3418144193214934 0.002040850449429693 80-81 0.0 4.91771192633661E-5 0.0 2.545751932906673 0.002188381807219791 82-83 0.0 4.91771192633661E-5 0.0 2.7581970881244144 0.0023605017246415725 84-85 0.0 4.91771192633661E-5 0.0 2.9829365231579974 0.0024096788439049387 86-87 0.0 4.91771192633661E-5 0.0 3.21657701677825 0.0024096788439049387 88-89 0.0 4.91771192633661E-5 0.0 3.4726914539018603 0.002434267403536622 90-91 0.0 4.91771192633661E-5 0.0 3.75494352991395 0.002458855963168305 92-93 0.0 4.91771192633661E-5 0.0 4.049366942943722 0.0025080330824316707 94-95 0.0 7.376567889504914E-5 0.0 4.348511359422779 0.002557210201695037 96-97 0.0 9.83542385267322E-5 0.0 4.6690724113410305 0.002655564440221769 98-99 0.0 9.83542385267322E-5 0.0 5.013164714826804 0.002655564440221769 100-101 0.0 9.83542385267322E-5 0.0 5.3916564132373 0.002655564440221769 102-103 0.0 9.83542385267322E-5 0.0 5.792326992435576 0.002753918678748501 104-105 0.0 9.83542385267322E-5 0.0 6.205414794247851 0.0028030957980118673 106-107 0.0 9.83542385267322E-5 0.0 6.632616429288712 0.0028276843576435506 108-109 0.0 9.83542385267322E-5 0.0 7.08563605194284 0.0028522729172752335 110-111 0.0 9.83542385267322E-5 0.0 7.573694372072117 0.0028768614769069164 112-113 0.0 9.83542385267322E-5 0.0 8.091898266309837 0.0029014500365385997 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4190 0.0 34.95026 1 GTACATG 10365 0.0 34.63198 1 CATGGGG 8090 0.0 33.91701 4 TACATGG 10780 0.0 32.907333 2 ACATGGG 10950 0.0 32.01595 3 GGTCTCG 885 0.0 30.250414 8 ATGGGGG 4845 0.0 30.218605 5 TCAACGC 4805 0.0 29.853058 4 CAACGCA 4960 0.0 28.798023 5 GGTATCA 2980 0.0 28.366217 1 GTCTCGT 865 0.0 28.198055 9 AACGCAG 5145 0.0 28.1061 6 ATCAACG 5240 0.0 27.147623 3 TATCAAC 5405 0.0 26.539122 2 ATGGGGA 3080 0.0 24.540655 5 ACGCAGA 6070 0.0 23.522564 7 GAGTACA 7655 0.0 22.785143 1 AGTACAT 7555 0.0 21.8228 2 CGCAGAG 6760 0.0 21.121592 8 TATACCG 205 5.927626E-5 20.322506 5 >>END_MODULE