##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921593_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1615580 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.768317260674184 33.0 31.0 34.0 30.0 34.0 2 31.94126443753946 33.0 31.0 34.0 30.0 34.0 3 32.01810742891098 34.0 31.0 34.0 30.0 34.0 4 35.419035888040206 37.0 35.0 37.0 35.0 37.0 5 35.27507768108048 37.0 35.0 37.0 33.0 37.0 6 35.30137597642952 37.0 35.0 37.0 33.0 37.0 7 35.18999987620545 37.0 35.0 37.0 33.0 37.0 8 35.230931925376645 37.0 36.0 37.0 33.0 37.0 9 36.95970734968247 39.0 38.0 39.0 34.0 39.0 10-11 36.913461419428316 39.0 38.0 39.0 34.0 39.0 12-13 36.83816090815682 39.0 38.0 39.0 34.0 39.0 14-15 38.272043786132535 41.0 39.0 41.0 34.0 41.0 16-17 38.27516062342936 41.0 39.0 41.0 34.0 41.0 18-19 38.28117332475024 41.0 39.0 41.0 34.0 41.0 20-21 38.22135579791778 41.0 39.0 41.0 34.0 41.0 22-23 38.22567096646406 41.0 39.0 41.0 34.0 41.0 24-25 38.18492089528219 41.0 39.0 41.0 34.0 41.0 26-27 38.110888040208465 41.0 39.0 41.0 34.0 41.0 28-29 38.041622822763344 41.0 39.0 41.0 33.5 41.0 30-31 37.93468816152713 41.0 38.0 41.0 33.0 41.0 32-33 37.82479883385534 41.0 38.0 41.0 33.0 41.0 34-35 37.69629699550626 41.0 38.0 41.0 33.0 41.0 36-37 37.62613519602867 40.5 38.0 41.0 33.0 41.0 38-39 37.551315317099736 40.0 38.0 41.0 33.0 41.0 40-41 37.43437093799131 40.0 38.0 41.0 32.0 41.0 42-43 37.28152892459674 40.0 38.0 41.0 32.0 41.0 44-45 37.13637888560146 40.0 37.5 41.0 31.5 41.0 46-47 36.94366945617054 40.0 37.0 41.0 31.0 41.0 48-49 36.76346234788745 40.0 37.0 41.0 31.0 41.0 50-51 36.52303878483269 40.0 36.0 41.0 30.0 41.0 52-53 36.398351366072866 40.0 36.0 41.0 30.0 41.0 54-55 36.270030886740365 40.0 35.5 41.0 30.0 41.0 56-57 36.0743191299719 39.0 35.0 41.0 30.0 41.0 58-59 35.87553386399931 39.0 35.0 41.0 29.5 41.0 60-61 35.621941965114694 39.0 35.0 41.0 29.0 41.0 62-63 35.26164628183068 38.0 35.0 41.0 28.5 41.0 64-65 34.973779695217814 37.0 35.0 40.0 29.0 41.0 66-67 34.66970190272224 37.0 35.0 39.5 29.0 41.0 68-69 34.29881373871922 36.0 35.0 39.0 28.0 41.0 70-71 33.92660499634806 35.5 35.0 39.0 28.0 41.0 72-73 33.602067059508045 35.0 34.0 37.5 28.0 40.0 74-75 33.284248071899874 35.0 34.0 37.0 27.5 39.0 76-77 32.958424838138626 35.0 34.0 36.5 27.0 39.0 78-79 32.70334771413363 35.0 34.0 36.0 27.0 38.0 80-81 32.451397330989494 35.0 34.0 36.0 26.0 37.0 82-83 32.23463926267966 35.0 34.0 35.0 26.0 37.0 84-85 32.0281774966266 35.0 34.0 35.0 26.0 36.0 86-87 31.902081605367734 35.0 34.0 35.0 26.0 36.0 88-89 31.80941395659763 35.0 34.0 35.0 25.5 36.0 90-91 31.706618366159525 35.0 34.0 35.0 25.0 36.0 92-93 31.627147835452284 35.0 34.0 35.0 25.0 35.0 94-95 31.56201271370034 35.0 33.0 35.0 25.0 35.0 96-97 31.499792025155052 35.0 33.0 35.0 25.0 35.0 98-99 31.422870424243925 35.0 33.0 35.0 24.0 35.0 100-101 31.358185914656037 35.0 33.0 35.0 24.0 35.0 102-103 30.670036148008762 34.0 31.5 35.0 23.0 35.0 104-105 31.189194902140407 35.0 33.0 35.0 24.0 35.0 106-107 31.287654588445015 35.0 33.0 35.0 24.0 35.0 108-109 31.272984315230445 35.0 33.0 35.0 24.0 35.0 110-111 31.21143954493123 35.0 33.0 35.0 23.0 35.0 112-113 31.17728865175355 35.0 33.0 35.0 23.0 35.0 114-115 31.050266777256464 35.0 33.0 35.0 20.0 35.0 116-117 31.23384790601518 35.0 33.5 35.0 23.5 35.0 118-119 31.214601567239008 35.0 34.0 35.0 23.0 35.0 120-121 31.133875759789056 35.0 34.0 35.0 21.5 35.0 122-123 31.001337600118845 35.0 33.0 35.0 19.0 35.0 124-125 30.3599128486364 34.5 32.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 24966.0 3 6765.0 4 3880.0 5 2907.0 6 2966.0 7 3378.0 8 3782.0 9 4009.0 10 4179.0 11 4535.0 12 5084.0 13 6221.0 14 8043.0 15 7485.0 16 4506.0 17 3933.0 18 3625.0 19 3323.0 20 3143.0 21 3308.0 22 3505.0 23 4612.0 24 5940.0 25 7581.0 26 9344.0 27 11178.0 28 13608.0 29 16277.0 30 20102.0 31 24792.0 32 32681.0 33 44631.0 34 69926.0 35 122962.0 36 288907.0 37 610959.0 38 218179.0 39 358.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.43358238340173 17.15647063776464 10.692147864913657 27.717799113919977 2 16.202222153446193 19.294605552288694 36.941598836309616 27.561573457955497 3 19.173682770166938 22.759356421359993 28.08907716826389 29.977883640209175 4 13.413057670977146 14.42019330506525 33.53779021644984 38.628958807507765 5 14.748702963063856 37.11655378214732 32.607446663612386 15.527296591176434 6 35.69863795962127 33.09174061340437 16.125168234376734 15.084453192597625 7 31.19247022570993 31.28238759090819 18.643548243267343 18.881593940114538 8 28.768729867598303 34.42307859020864 17.998258752370067 18.809932789822987 9 28.287189304855215 15.132550053000207 17.798472900547836 38.78178774159674 10-11 27.402523363704574 24.598631079990128 25.903449736642532 22.095395819662762 12-13 27.15325483638728 21.877269173304846 26.465640168141384 24.503835822166483 14-15 24.359366581409894 23.248964223120893 23.723625621620954 28.668043573848262 16-17 24.750921600913518 26.44324282148282 24.427238887997856 24.378596689605804 18-19 24.71009492249333 25.604151438852373 26.188373209696636 23.49738042895766 20-21 25.243099527096234 24.64535313315381 26.096134088353168 24.01541325139678 22-23 25.038060064801922 24.27948947053877 25.996099752497386 24.686350712161918 24-25 24.63639965088424 24.66360468211277 25.932306206708716 24.767689460294275 26-27 24.44641352222037 24.90195963129208 26.152320580167483 24.499306266320072 28-29 24.51834065919781 25.26668065606567 25.974569005805602 24.240409678930913 30-31 25.05892737325044 24.770418458628278 25.976294111966965 24.19436005615432 32-33 24.58375401048995 24.749651954779193 26.028768436801858 24.637825597929 34-35 24.657245097996736 24.94863860581747 26.20260561196351 24.191510684222287 36-37 24.618280623205454 25.120575133249336 26.052925852367075 24.20821839117814 38-39 24.791742492330776 25.114790770685858 26.049736683775414 24.043730053207952 40-41 24.732480013568274 24.842196091879245 26.04932054952745 24.376003345025033 42-43 24.58914310261797 24.807245442041786 25.882777497855187 24.720833957485056 44-45 24.463559827200186 24.94569829608093 25.97246320204567 24.618278674673213 46-47 24.55719105508754 24.9626975497838 25.752540760335513 24.72757063479315 48-49 24.40256395734083 25.20055869535412 25.809267992098047 24.587609355207004 50-51 24.503360448835636 25.13964215459922 25.781370894762055 24.57562650180309 52-53 24.661473654629933 25.27289929210677 25.533488675967625 24.53213837729567 54-55 24.365670290612005 24.84675839652567 25.79181921189325 24.995752100969078 56-57 24.48615658869625 25.132182449537932 25.48636085096901 24.895300110796807 58-59 24.385441551451947 25.313751396178624 25.725432594863552 24.575374457505877 60-61 24.754592625925444 25.0058647704631 25.76327124826455 24.476271355346906 62-63 24.62752183524706 25.050686617587846 25.852325920754016 24.469465626411075 64-65 24.45468500476609 24.79539855655554 25.78881887619307 24.9610975624853 66-67 24.371495131135752 25.263931964961138 25.573801137156728 24.790771766746385 68-69 24.38813409875954 25.12846081306882 25.652826664017446 24.830578424154194 70-71 24.294928137263398 24.93968110523775 25.8929300932173 24.872460664281558 72-73 24.37818952062292 25.217937357961972 25.539934059383697 24.86393906203141 74-75 24.289384091612504 25.23952336737852 25.545961002785518 24.92513153822346 76-77 24.23617533056772 24.909968964206705 25.744821900103616 25.10903380512196 78-79 24.126798041814162 24.885938584171473 25.808085903674044 25.17917747034032 80-81 24.22767674766957 25.186713130887977 25.502760618477577 25.082849502964876 82-83 24.240142370783037 25.2793562364593 25.470999690498296 25.009501702259364 84-85 24.336675527395997 25.184712007727374 25.403398397640935 25.075214067235695 86-87 23.999956671907302 25.33755679075007 25.43504499931913 25.2274415380235 88-89 24.080682834223786 25.10704489246921 25.515045707047186 25.297226566259823 90-91 24.188947495636988 24.91766840258596 25.67628586929509 25.21709823248196 92-93 24.114157144802487 25.20200175788262 25.629247700516224 25.054593396798673 94-95 24.016492405131068 24.954264277731507 25.651217571430827 25.3780257457066 96-97 23.846360490256945 25.058261495542418 25.657434166831212 25.437943847369425 98-99 23.893896239066162 25.033711022645576 25.50868285146507 25.563709886823194 100-101 23.768058530063506 25.002104507359586 25.666850295250004 25.562986667326904 102-103 23.575427639418034 25.032109708428372 25.81317256298919 25.579290089164402 104-105 23.829213038042067 24.95196771438121 25.72676685772292 25.492052389853797 106-107 23.718294114497564 24.90988483022881 25.738755604440904 25.633065450832724 108-109 23.763496236249978 24.902463134685984 25.75285832689071 25.58118230217333 110-111 23.55673215507634 25.225329502713734 25.594670887239463 25.623267454970467 112-113 23.48845565462936 25.206977456007134 25.686621075041728 25.61794581432178 114-115 23.483021577390165 25.183865856225008 25.64069869644338 25.692413869941443 116-117 23.3206586698474 24.996084946448878 25.767335021500298 25.915921362203427 118-119 23.548565703846094 24.884830136637802 25.67595463707837 25.890649522437737 120-121 23.257162770861278 25.02771517405005 25.802347325137525 25.912774729951142 122-123 23.141018419596403 25.154280677559882 25.671592919367995 26.033107983475716 124-125 22.931588260660522 24.966015940599455 25.774570134176628 26.32782566456339 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 18.5 2 19.0 3 43.0 4 47.5 5 57.5 6 137.5 7 319.5 8 564.0 9 627.0 10 528.5 11 449.5 12 447.0 13 494.0 14 511.0 15 531.0 16 550.5 17 611.5 18 725.5 19 779.0 20 806.5 21 854.5 22 957.0 23 1136.0 24 1290.0 25 1545.0 26 2021.0 27 2668.0 28 3533.5 29 4701.5 30 6074.5 31 7619.0 32 9906.5 33 12228.5 34 14422.5 35 17037.5 36 20358.0 37 23581.5 38 26398.5 39 30016.0 40 33777.0 41 36615.0 42 39767.5 43 45049.5 44 50432.5 45 55645.5 46 59109.0 47 62401.5 48 68495.5 49 72967.0 50 75417.0 51 75878.5 52 74736.5 53 73704.0 54 73865.0 55 72567.0 56 68217.5 57 62842.0 58 57757.0 59 52848.0 60 45361.5 61 37454.5 62 30584.5 63 23508.0 64 17084.5 65 12717.0 66 9828.0 67 7542.0 68 5937.5 69 4636.0 70 3575.5 71 2751.0 72 2092.5 73 1681.0 74 1321.0 75 986.5 76 742.0 77 459.0 78 244.0 79 133.5 80 89.0 81 62.5 82 31.0 83 13.5 84 7.5 85 4.0 86 3.5 87 2.5 88 2.5 89 1.0 90 0.0 91 0.5 92 1.0 93 1.0 94 0.5 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.023273375506010226 2 0.0018569182584582628 3 0.030082075787023856 4 0.16644177323314227 5 0.02228301910149915 6 0.0629495289617351 7 0.047289518315403754 8 0.03998563983213459 9 0.030453459438715507 10-11 0.05877146288020401 12-13 0.05369588630708476 14-15 0.05261268398965077 16-17 0.0449993191299719 18-19 0.032527018160660566 20-21 0.021447405885192932 22-23 0.0025687369242005965 24-25 0.004332809269735946 26-27 0.002878223300610307 28-29 0.004394706545017888 30-31 0.001980712809022147 32-33 0.007984748511370529 34-35 0.00414711744389012 36-37 0.005787395238861586 38-39 0.001980712809022147 40-41 0.002878223300610307 42-43 0.003342452865224873 44-45 0.004270911994454004 46-47 0.0043018606320949756 48-49 0.0018878668960992339 50-51 0.001361740056202726 52-53 7.11818665742334E-4 54-55 0.004673244283786628 56-57 6.189727528194209E-4 58-59 5.880241151784498E-4 60-61 6.189727528194209E-5 62-63 9.594077668701024E-4 64-65 0.0 66-67 0.0036828878792755544 68-69 5.880241151784498E-4 70-71 0.0 72-73 0.002197353272508944 74-75 0.004951782022555367 76-77 0.0016093291573304942 78-79 1.8569182584582628E-4 80-81 0.0 82-83 0.004951782022555367 84-85 0.001516483244407581 86-87 0.0 88-89 0.0012069968679978707 90-91 5.880241151784498E-4 92-93 0.0 94-95 0.003002017851174191 96-97 0.0011760482303568996 98-99 6.499213904603919E-4 100-101 0.0 102-103 0.0015474318820485524 104-105 0.0 106-107 5.261268398965078E-4 108-109 0.0022901991854318575 110-111 9.284591292291314E-5 112-113 3.404350140506815E-4 114-115 0.0 116-117 0.0012998427809207838 118-119 0.0019497641713811758 120-121 0.0024139937359957415 122-123 0.0011141509550749577 124-125 0.09829287314772404 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1615580.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.137802929170924 #Duplication Level Percentage of deduplicated Percentage of total 1 80.35723316695051 49.12864685294458 2 11.02445953118708 13.480224684366718 3 3.421209190154512 6.274956397414051 4 1.5968043957070341 3.9050044984468215 5 0.894155376533051 2.733334759926815 6 0.5756853965078577 2.1117684192539414 7 0.3996128400638208 1.7102015744651724 8 0.2862521902509021 1.4000663996482556 9 0.22405711407481435 1.2328523716666293 >10 1.135613115857982 12.112278721585177 >50 0.05868985822991224 2.434914522690021 >100 0.024398128330131753 2.518695529285066 >500 0.0014230970074656046 0.5867245966288485 >1k 4.065991449901727E-4 0.3703306716779269 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2104 0.13023186719320617 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1716 0.10621572438381263 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 6.189727528194209E-5 7 0.0 0.0 0.0 0.0 6.189727528194209E-5 8 0.0 0.0 0.0 0.0 6.189727528194209E-5 9 0.0 0.0 0.0 0.0 6.189727528194209E-5 10-11 0.0 0.0 0.0 0.0 9.284591292291314E-5 12-13 0.0 0.0 0.0 0.0 2.4758910112776837E-4 14-15 0.0 0.0 0.0 0.0 3.0948637640971046E-4 16-17 0.0 0.0 0.0 0.0 3.0948637640971046E-4 18-19 0.0 0.0 0.0 6.189727528194209E-5 3.0948637640971046E-4 20-21 0.0 0.0 0.0 6.189727528194209E-5 3.404350140506815E-4 22-23 0.0 0.0 0.0 2.1664046348679732E-4 3.7138365169165255E-4 24-25 0.0 0.0 0.0 4.951782022555367E-4 4.023322893326236E-4 26-27 0.0 0.0 0.0 8.975104915881604E-4 4.951782022555367E-4 28-29 0.0 0.0 0.0 0.002754428750046423 4.951782022555367E-4 30-31 0.0 0.0 0.0 0.011760482303568997 4.951782022555367E-4 32-33 0.0 0.0 0.0 0.02937025712128152 4.951782022555367E-4 34-35 0.0 0.0 0.0 0.05224130033795912 4.951782022555367E-4 36-37 0.0 0.0 0.0 0.08362321890590377 4.951782022555367E-4 38-39 0.0 0.0 0.0 0.13589546788150386 5.261268398965078E-4 40-41 0.0 0.0 0.0 0.20240409017195063 6.189727528194209E-4 42-43 0.0 0.0 0.0 0.2636514440634323 6.49921390460392E-4 44-45 0.0 0.0 0.0 0.33452382426125604 6.80870028101363E-4 46-47 0.0 0.0 0.0 0.40886245187486847 7.427673033833051E-4 48-49 0.0 0.0 0.0 0.48230356899689275 9.284591292291314E-4 50-51 0.0 0.0 0.0 0.5597370603746024 9.284591292291314E-4 52-53 0.0 0.0 0.0 0.6427722551653277 9.903564045110735E-4 54-55 0.0 0.0 0.0 0.7408175392119238 0.0011141509550749577 56-57 0.0 0.0 0.0 0.8452691912502012 0.0011141509550749577 58-59 0.0 0.0 0.0 0.9602433800864086 0.0011141509550749577 60-61 0.0 0.0 0.0 1.071008554203444 0.0011760482303568996 62-63 0.0 0.0 0.0 1.1920486760172817 0.0011760482303568996 64-65 0.0 0.0 0.0 1.3202998304014657 0.0011760482303568996 66-67 0.0 0.0 0.0 1.4682343183253073 0.0012069968679978707 68-69 0.0 0.0 0.0 1.6285792099431782 0.0012379455056388418 70-71 0.0 0.0 0.0 1.7927926812661708 0.0012998427809207838 72-73 0.0 0.0 0.0 1.9481857908614861 0.0016093291573304944 74-75 0.0 0.0 0.0 2.1124302108221196 0.0016093291573304944 76-77 0.0 0.0 0.0 2.307870857524852 0.0016093291573304944 78-79 0.0 0.0 0.0 2.5264610851830303 0.0016093291573304944 80-81 0.0 0.0 0.0 2.740223325369217 0.0016712264326124364 82-83 0.0 0.0 0.0 2.954356949207096 0.0017950209831763206 84-85 0.0 0.0 0.0 3.1807771821884403 0.0017950209831763206 86-87 0.0 0.0 0.0 3.4464402876985356 0.0018259696208172917 88-89 0.0 0.0 0.0 3.752646108518303 0.0018569182584582628 90-91 0.0 0.0 0.0 4.0578925215712 0.0018569182584582628 92-93 0.0 0.0 0.0 4.3521521682615525 0.0018569182584582628 94-95 0.0 0.0 0.0 4.660029215513934 0.001980712809022147 96-97 0.0 0.0 0.0 5.01432921922777 0.0021045073595860313 98-99 0.0 0.0 0.0 5.410131346018148 0.0022283019101499153 100-101 0.0 0.0 0.0 5.830506691095458 0.0022283019101499153 102-103 3.0948637640971046E-5 0.0 0.0 6.249582193391847 0.002290199185431857 104-105 6.189727528194209E-5 0.0 0.0 6.668595798412953 0.0023520964607137993 106-107 6.189727528194209E-5 0.0 0.0 7.122426620780153 0.0024139937359957415 108-109 6.189727528194209E-5 0.0 0.0 7.62432067740378 0.0024758910112776837 110-111 6.189727528194209E-5 0.0 0.0 8.158958392651556 0.0025687369242005965 112-113 6.189727528194209E-5 0.0 0.0 8.688458634050928 0.0025996855618415676 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4340 0.0 43.42884 1 GGTATCA 2835 0.0 43.130222 1 GTACATG 8505 0.0 35.27561 1 TCAACGC 5410 0.0 34.383457 4 CAACGCA 5485 0.0 33.98827 5 ATGGGGG 4335 0.0 33.79927 5 TACATGG 8790 0.0 33.646427 2 ACATGGG 8880 0.0 33.03682 3 CATGGGG 7335 0.0 32.43135 4 AACGCAG 5760 0.0 32.383633 6 TATCAAC 5730 0.0 32.36323 2 ATCAACG 5725 0.0 32.287346 3 ACGCAGA 6885 0.0 27.090508 7 TACGGTC 90 0.009436909 26.497795 4 CGCAGAG 7225 0.0 25.814857 8 TATCACG 140 1.0409348E-4 25.554615 2 TGGGGGG 3120 0.0 25.021904 6 GCAGAGT 7960 0.0 23.13176 9 GAGTACT 3255 0.0 22.31457 12-13 GTCCTAA 415 1.8189894E-12 21.558773 1 >>END_MODULE