##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921590_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1943255 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7141553733298 33.0 31.0 34.0 30.0 34.0 2 31.885347522584528 33.0 31.0 34.0 30.0 34.0 3 31.9397675549529 34.0 31.0 34.0 30.0 34.0 4 35.33481452511379 37.0 35.0 37.0 33.0 37.0 5 35.1737924255952 37.0 35.0 37.0 33.0 37.0 6 35.1927039940718 37.0 35.0 37.0 33.0 37.0 7 35.084920404167235 37.0 35.0 37.0 33.0 37.0 8 35.119928676370314 37.0 36.0 37.0 33.0 37.0 9 36.84067299453751 39.0 38.0 39.0 34.0 39.0 10-11 36.786541910351445 39.0 38.0 39.0 33.0 39.0 12-13 36.71643428165629 39.0 38.0 39.0 33.0 39.0 14-15 38.140045953824895 41.0 39.0 41.0 33.0 41.0 16-17 38.144253842136 41.0 39.0 41.0 33.0 41.0 18-19 38.15445888470633 41.0 39.0 41.0 33.5 41.0 20-21 38.09265896652781 41.0 39.0 41.0 33.5 41.0 22-23 38.09557366377547 41.0 39.0 41.0 34.0 41.0 24-25 38.05047536221443 41.0 39.0 41.0 33.0 41.0 26-27 37.97102979279611 41.0 39.0 41.0 33.0 41.0 28-29 37.898575585808345 41.0 39.0 41.0 33.0 41.0 30-31 37.7843373617976 41.0 38.0 41.0 33.0 41.0 32-33 37.66238990765494 41.0 38.0 41.0 33.0 41.0 34-35 37.52056343609048 41.0 38.0 41.0 32.0 41.0 36-37 37.44003488991409 40.0 38.0 41.0 32.0 41.0 38-39 37.347194784009304 40.0 38.0 41.0 32.0 41.0 40-41 37.22224489323326 40.0 38.0 41.0 32.0 41.0 42-43 37.05803793120306 40.0 37.0 41.0 31.0 41.0 44-45 36.89054370116119 40.0 37.0 41.0 31.0 41.0 46-47 36.675909234763324 40.0 37.0 41.0 30.0 41.0 48-49 36.476065673316164 40.0 36.0 41.0 30.0 41.0 50-51 36.22072347684684 40.0 36.0 41.0 29.5 41.0 52-53 36.08143167005874 40.0 35.0 41.0 29.0 41.0 54-55 35.94303732654747 39.5 35.0 41.0 29.0 41.0 56-57 35.73336206519474 39.0 35.0 41.0 29.0 41.0 58-59 35.528722941662316 39.0 35.0 41.0 28.5 41.0 60-61 35.26828311261261 38.5 35.0 41.0 28.0 41.0 62-63 34.91388649456711 37.5 35.0 40.5 28.0 41.0 64-65 34.62586768077273 37.0 35.0 40.0 28.0 41.0 66-67 34.32077982560189 36.5 35.0 39.0 28.0 41.0 68-69 33.9602785017921 36.0 35.0 39.0 27.0 41.0 70-71 33.59329166784596 35.0 34.0 38.5 26.0 40.5 72-73 33.28662321723088 35.0 34.0 37.0 26.0 39.5 74-75 32.977661192174985 35.0 34.0 37.0 26.0 39.0 76-77 32.66936120066589 35.0 34.0 36.5 26.0 39.0 78-79 32.421214405726474 35.0 34.0 36.0 26.0 37.5 80-81 32.18570285423169 35.0 34.0 35.5 26.0 37.0 82-83 31.974715876197408 35.0 34.0 35.0 25.0 37.0 84-85 31.774207965501184 35.0 34.0 35.0 24.5 36.0 86-87 31.656423886726138 35.0 34.0 35.0 25.0 36.0 88-89 31.56549449248812 35.0 33.0 35.0 24.5 36.0 90-91 31.469754355450007 35.0 33.0 35.0 24.0 35.5 92-93 31.395656514456412 35.0 33.0 35.0 24.0 35.0 94-95 31.33317217760922 35.0 33.0 35.0 24.0 35.0 96-97 31.268531407355184 35.0 33.0 35.0 23.5 35.0 98-99 31.193570324018207 35.0 33.0 35.0 23.0 35.0 100-101 31.12301036148112 35.0 33.0 35.0 22.5 35.0 102-103 30.43413242214738 34.0 31.5 35.0 20.0 35.0 104-105 30.95232792402438 35.0 33.0 35.0 20.0 35.0 106-107 31.054646199289337 35.0 33.0 35.0 20.0 35.0 108-109 31.038695642105644 35.0 33.0 35.0 20.0 35.0 110-111 30.971153039616517 35.0 33.0 35.0 20.0 35.0 112-113 30.935671849551397 35.0 33.0 35.0 19.5 35.0 114-115 30.817803633594153 35.0 33.0 35.0 18.5 35.0 116-117 31.009073693365 35.0 33.0 35.0 19.0 35.0 118-119 30.992701163769034 35.0 33.0 35.0 18.5 35.0 120-121 30.911245050186412 35.0 33.0 35.0 17.5 35.0 122-123 30.779521730292732 35.0 33.0 35.0 4.5 35.0 124-125 30.141416334963758 34.5 32.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 33918.0 3 9336.0 4 4935.0 5 3961.0 6 4058.0 7 4435.0 8 4832.0 9 5263.0 10 5510.0 11 5919.0 12 6542.0 13 8101.0 14 10900.0 15 9905.0 16 5655.0 17 4874.0 18 4479.0 19 4190.0 20 3913.0 21 4180.0 22 4720.0 23 5571.0 24 7404.0 25 9843.0 26 11590.0 27 13578.0 28 16383.0 29 19904.0 30 23868.0 31 30446.0 32 39461.0 33 54088.0 34 83659.0 35 154657.0 36 360231.0 37 716886.0 38 245750.0 39 310.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.95933306808139 17.73248706639414 11.344770736362388 26.963409129162088 2 16.29966987528336 19.87988915219959 36.92482265123855 26.89561832127851 3 19.018113101485774 23.839419507707863 27.95822358074916 29.184243810057207 4 13.833834195021625 15.567193645328068 33.61208047464162 36.986891685008686 5 15.248227132883835 36.78082230562031 32.09495577676467 15.875994784731184 6 34.34199244548467 33.43236082466263 16.77251742507924 15.453129304773455 7 30.483002843070928 31.19299828138885 19.348173731095535 18.975825144444684 8 28.30667074405047 33.30944563024924 18.65392793121165 19.72995569448863 9 28.218910963565285 15.285972702535473 18.34635884521656 38.14875748868268 10-11 27.005429515679374 24.69886373584047 25.976349886558964 22.319356861921197 12-13 27.30837909895363 22.33034453711418 26.292516201184053 24.06876016274814 14-15 24.917550886743108 23.50022424099187 23.907462359180006 27.674762513085017 16-17 24.810873776410546 26.353565061814997 24.47287026251263 24.362690899261825 18-19 24.776923546171105 25.357268520294056 26.35201692207388 23.513791011460956 20-21 25.747578802324593 24.281747601450185 26.125978200920997 23.844695395304225 22-23 25.57528338002192 23.94098995236967 25.923421458840068 24.560305208768344 24-25 24.97847568202368 24.553856082208743 25.890936936964753 24.57673129880282 26-27 24.638885665374886 24.700202476705144 26.154103067307226 24.506808790612737 28-29 24.646111686490453 24.87949412362579 26.09020089673406 24.384193293149696 30-31 25.086834658935793 24.476785639391014 25.961420941542695 24.474958760130498 32-33 24.84311549329553 24.499329540194008 25.89449322322233 24.76306174328813 34-35 24.932886674521534 24.76908204306523 25.983747678083503 24.314283604329734 36-37 24.997195246844008 24.71479005522019 25.924281957460387 24.36373274047542 38-39 24.939931834403815 24.774895546490367 25.981559369064268 24.303613250041558 40-41 24.959300077115643 24.51219916986824 25.9964372933001 24.53206345971602 42-43 24.854503583053507 24.474352541587866 25.85930243030092 24.811841445057702 44-45 24.793202567692436 24.678157142632912 25.71783739303104 24.810802896643615 46-47 24.852115921458882 24.74028779403451 25.582652590972284 24.824943693534323 48-49 24.804067905114806 24.993162092752126 25.486057487823636 24.71671251430943 50-51 24.85145804236469 24.95759619847861 25.50665852897919 24.68428723017751 52-53 24.991187384760583 24.81622159314587 25.344026487762427 24.848564534331118 54-55 24.745047030534145 24.724899358130667 25.47882886186236 25.051224749472826 56-57 24.801967230999377 24.955628206309157 25.211772715553778 25.03063184713769 58-59 24.740060280799224 24.94281454828768 25.464443642804618 24.852681528108484 60-61 24.957455359646943 24.799704413166992 25.632920674765458 24.609919552420607 62-63 24.796370380510016 24.864401302159184 25.579240585539363 24.759987731791437 64-65 24.752258452956507 24.643008766219566 25.484097557963313 25.12063522286061 66-67 24.74595974878499 24.977974429753868 25.316977803577203 24.95908801788394 68-69 24.71275532324112 24.949035056008046 25.365657231001197 24.972552389749634 70-71 24.55781665298687 24.787328477219923 25.59334724470026 25.06150762509295 72-73 24.716165519938656 25.029667405993177 25.324617514319094 24.929549559749077 74-75 24.57761466435737 25.085241286038908 25.293664625232964 25.043479424370762 76-77 24.617850390434835 24.757772931292322 25.26288867229513 25.361488005977712 78-79 24.52994327285302 24.902463631149782 25.35906994958702 25.20852314641018 80-81 24.598367172604725 25.101903764559978 25.264749093659866 25.03497996917543 82-83 24.620364249614866 24.985622538301943 25.34238944021433 25.051623771868858 84-85 24.558431403223885 25.01229277570747 25.117890999681197 25.31138482138745 86-87 24.295884997079643 25.23608584565587 25.193168163725293 25.27486099353919 88-89 24.341419007827685 25.00268882083499 25.222425949359597 25.433466221977724 90-91 24.373629704418835 24.93002020594991 25.303134276552118 25.393215813079138 92-93 24.3285621290052 25.036523770683722 25.35462407146772 25.28029002884336 94-95 24.3255851412977 24.8345949651204 25.34797905191195 25.491840841669948 96-97 24.18216600989848 24.90377477675671 25.35282153016052 25.56123768318429 98-99 24.18378752230806 25.01301946641801 25.17751244825663 25.625680563017305 100-101 24.080318846471513 25.060787184389078 25.35107332799864 25.507820641140768 102-103 24.03831037289137 24.88784801208913 25.513120270929868 25.560721344089632 104-105 24.039639676727965 24.99329732845149 25.32853382597755 25.638529168843 106-107 24.060101623987133 24.876263481336856 25.27168515295573 25.791949741720284 108-109 24.0363575545492 24.88534376286538 25.345023672293127 25.7332750102923 110-111 23.879739859019974 25.248397790510147 25.19511088102739 25.676751469442493 112-113 23.81799637410993 25.25942404645421 25.24061532064632 25.68196425878954 114-115 23.70926615395303 25.31631206403689 25.235236754826307 25.73918502718377 116-117 23.627830934135577 25.22446003255423 25.249341427806133 25.898367605504063 118-119 23.701823840692214 25.164225941960893 25.18264909502693 25.951301122319958 120-121 23.568257624470558 25.237205321838896 25.256657766401357 25.93787928728919 122-123 23.390847599972826 25.369488294734328 25.18729145524869 26.052372650044152 124-125 23.299640437965568 25.336488913697124 25.182015561702663 26.18185508663464 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 28.0 1 22.0 2 23.0 3 43.0 4 51.0 5 61.5 6 147.0 7 443.5 8 754.5 9 809.0 10 673.0 11 520.5 12 498.5 13 540.0 14 591.5 15 637.0 16 686.5 17 782.5 18 879.5 19 920.0 20 946.0 21 1050.5 22 1180.0 23 1338.0 24 1518.5 25 1755.0 26 2151.0 27 2758.5 28 3604.5 29 4817.5 30 6586.5 31 8788.0 32 11545.5 33 14190.5 34 16823.0 35 20267.0 36 24312.0 37 28062.0 38 31684.0 39 35658.0 40 39526.5 41 43379.0 42 47639.0 43 53168.5 44 59216.5 45 64773.5 46 70378.5 47 75464.5 48 80745.5 49 85578.0 50 87887.0 51 88766.5 52 88288.0 53 88119.0 54 88816.5 55 87061.5 56 82414.5 57 75691.0 58 69498.5 59 63391.5 60 54907.5 61 47249.5 62 40065.0 63 31219.5 64 23329.0 65 17814.5 66 13648.5 67 10695.0 68 8514.5 69 6585.0 70 5191.0 71 3999.0 72 3045.5 73 2546.5 74 2063.0 75 1606.0 76 1185.0 77 720.0 78 389.5 79 217.5 80 135.5 81 70.0 82 41.5 83 26.5 84 15.0 85 9.0 86 7.0 87 5.5 88 7.0 89 4.5 90 1.5 91 1.0 92 1.0 93 1.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.023054102523858165 2 0.002573002513823456 3 0.03231691157362261 4 0.16801706415267167 5 0.025627105037681626 6 0.07050026887876269 7 0.050893989723427964 8 0.04286622188029878 9 0.033809253031640216 10-11 0.06571448420305107 12-13 0.05727503595771013 14-15 0.05907613771738655 16-17 0.04978759864248388 18-19 0.03620214536949603 20-21 0.024006113453972844 22-23 0.0031133330417263817 24-25 0.0053518452287527885 26-27 0.003525013443938135 28-29 0.0047600546505733934 30-31 0.0025987325389616907 32-33 0.009545839326285022 34-35 0.004451294348914579 36-37 0.006432506284558641 38-39 0.0023671623127175796 40-41 0.003576473494214604 42-43 0.00411680402211753 44-45 0.005634875505273368 46-47 0.004862974751126331 48-49 0.0022385121870264067 50-51 0.0016981816591234808 52-53 9.262809049764441E-4 54-55 0.005274655153338085 56-57 8.23360804423506E-4 58-59 8.23360804423506E-4 60-61 1.0292010055293825E-4 62-63 0.0010806610558058516 64-65 0.0 66-67 0.003036142966311678 68-69 3.859503770735184E-4 70-71 0.0 72-73 0.0023157022624411107 74-75 0.004862974751126331 76-77 0.0019040218602293575 78-79 2.830302765205802E-4 80-81 0.0 82-83 0.005634875505273368 84-85 0.002084132036196999 86-87 0.0 88-89 0.001235041206635259 90-91 7.976307792852713E-4 92-93 0.0 94-95 0.0036279335444910727 96-97 0.0014151513826029007 98-99 5.660605530411604E-4 100-101 0.0 102-103 0.001106391080944086 104-105 0.0 106-107 6.689806535940986E-4 108-109 0.0028303027652058013 110-111 5.146005027646912E-5 112-113 4.11680402211753E-4 114-115 0.0 116-117 0.0018525618099528881 118-119 0.002470082413270518 120-121 0.002804572740067567 122-123 0.0013894213574646662 124-125 0.11030461776761157 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1943255.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.94326730703108 #Duplication Level Percentage of deduplicated Percentage of total 1 79.32834849679365 47.552003989686185 2 11.207325076692173 13.43607365737903 3 3.7105881063023336 6.672743241671131 4 1.6879489111107309 4.047246911172903 5 1.0095912766925554 3.025909988481432 6 0.641213936673029 2.3061875044191047 7 0.4382515450564148 1.8389160659125232 8 0.34097397161029075 1.6351275139980546 9 0.24308303456603933 1.3114072186916734 >10 1.3155660155602722 13.71221669056433 >50 0.05970002671422753 2.3759190720698893 >100 0.016806637022963727 1.5986695725013143 >500 3.445515459156344E-4 0.1448846211063697 >1k 2.584136594367256E-4 0.34269395234603534 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2839 0.14609508273489583 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2290 0.1178435151331143 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 1.0292010055293825E-4 5 0.0 0.0 0.0 0.0 1.0292010055293825E-4 6 0.0 0.0 0.0 0.0 2.058402011058765E-4 7 0.0 0.0 0.0 0.0 2.058402011058765E-4 8 0.0 0.0 0.0 0.0 2.058402011058765E-4 9 0.0 0.0 0.0 5.146005027646912E-5 3.087603016588147E-4 10-11 0.0 0.0 0.0 7.719007541470368E-5 3.087603016588147E-4 12-13 0.0 0.0 0.0 1.0292010055293825E-4 3.087603016588147E-4 14-15 0.0 0.0 0.0 1.0292010055293825E-4 3.344903267970493E-4 16-17 0.0 0.0 0.0 1.8011017596764194E-4 3.6022035193528383E-4 18-19 0.0 0.0 0.0 3.087603016588147E-4 4.11680402211753E-4 20-21 0.0 0.0 0.0 3.6022035193528383E-4 5.146005027646912E-4 22-23 0.0 0.0 0.0 6.43250628455864E-4 5.660605530411604E-4 24-25 0.0 0.0 0.0 0.001286501256911728 6.175206033176295E-4 26-27 0.0 0.0 0.0 0.001698181659123481 6.947106787323331E-4 28-29 0.0 0.0 0.0 0.004168264072393998 7.719007541470368E-4 30-31 0.0 0.0 0.0 0.013662643348402552 7.719007541470368E-4 32-33 0.0 0.0 0.0 0.03121052049267852 9.262809049764442E-4 34-35 0.0 0.0 0.0 0.05465057339361021 9.777409552529132E-4 36-37 0.0 0.0 0.0 0.08321090129705057 0.0010292010055293825 38-39 0.0 0.0 0.0 0.12404445119142882 0.0010292010055293825 40-41 0.0 0.0 0.0 0.17156780762174806 0.0010292010055293825 42-43 0.0 0.0 0.0 0.22161270651561427 0.0010292010055293825 44-45 0.0 0.0 0.0 0.28894818230237407 0.0010549310306676172 46-47 0.0 0.0 0.0 0.3593969911308603 0.0010806610558058516 48-49 0.0 0.0 0.0 0.42709268726955546 0.0011321211060823207 50-51 0.0 0.0 0.0 0.4941451327797947 0.0011321211060823207 52-53 0.0 0.0 0.0 0.5655202225132574 0.0012607712317734936 54-55 0.0 0.0 0.0 0.652899387882702 0.0013894213574646662 56-57 0.0 0.0 0.0 0.7526032352933609 0.0014151513826029007 58-59 0.0 0.0 0.0 0.8465950171233317 0.00146661143287937 60-61 0.0 0.0 0.0 0.9405096088778879 0.0015180714831558389 62-63 0.0 0.0 0.0 1.039029875132188 0.0017496417093999502 64-65 0.0 0.0 0.0 1.1551237485559023 0.0017496417093999502 66-67 0.0 0.0 0.0 1.2998036799081953 0.0017496417093999502 68-69 0.0 0.0 0.0 1.4451783219392205 0.0017496417093999502 70-71 0.0 0.0 0.0 1.5903985838194163 0.001826831784814654 72-73 0.0 0.0 0.0 1.7396069995960386 0.002058402011058765 74-75 0.0 0.0 0.0 1.9020149182685753 0.002109862061335234 76-77 0.0 0.0 0.0 2.105642337212563 0.0021355920864734685 78-79 0.0 0.0 0.0 2.3183781850554865 0.002187052136749938 80-81 0.0 0.0 0.0 2.5301620219682954 0.0022385121870264067 82-83 0.0 0.0 0.0 2.743232360138016 0.0025472724886852214 84-85 0.0 0.0 0.0 2.9756259471865505 0.0025987325389616907 86-87 0.0 0.0 0.0 3.2535616787297603 0.0027273826646528635 88-89 0.0 0.0 0.0 3.565975643958204 0.0028303027652058018 90-91 0.0 0.0 0.0 3.8834584241388805 0.0028560327903440364 92-93 0.0 0.0 0.0 4.184937128683575 0.0029074928406205053 94-95 0.0 0.0 0.0 4.508183434495216 0.003036142966311678 96-97 0.0 0.0 0.0 4.87656020439932 0.0031133330417263817 98-99 0.0 0.0 0.0 5.289990248320473 0.0031390630668646164 100-101 0.0 2.573002513823456E-5 0.0 5.7282497665000225 0.0031390630668646164 102-103 0.0 5.146005027646912E-5 0.0 6.1545962830405685 0.0031905231171410853 104-105 0.0 5.146005027646912E-5 0.0 6.590591559007953 0.00321625314227932 106-107 0.0 5.146005027646912E-5 0.0 7.087952944930027 0.0034220933433851963 108-109 0.0 5.146005027646912E-5 0.0 7.639630413918914 0.0036022035193528385 110-111 0.0 5.146005027646912E-5 0.0 8.225065675889166 0.0037308536450440114 112-113 0.0 5.146005027646912E-5 0.0 8.791820939609057 0.003833773745596949 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3195 0.0 58.62385 1 GTATCAA 5690 0.0 51.3688 1 TCAACGC 7355 0.0 39.23932 4 CAACGCA 7605 0.0 37.916145 5 TATCAAC 7715 0.0 37.49238 2 ATCAACG 7705 0.0 37.462666 3 AACGCAG 7955 0.0 36.33312 6 ACGCAGA 9400 0.0 30.621073 7 GTACATG 11520 0.0 30.239594 1 CGCAGAG 9855 0.0 29.084127 8 TACATGG 11885 0.0 28.95435 2 ACATGGG 12025 0.0 28.31894 3 CATGGGG 10255 0.0 25.817017 4 GCAGAGT 11010 0.0 25.816576 9 TAGGTCG 170 1.38547275E-5 24.53167 5 ATGGGGG 5750 0.0 23.934378 5 AGAGTAC 9885 0.0 23.449873 10-11 GAGTACT 4045 0.0 22.814821 12-13 CAGAGTA 10355 0.0 22.644472 10-11 GTACTTT 4165 0.0 22.079193 14-15 >>END_MODULE