##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921589_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1861771 Sequences flagged as poor quality 0 Sequence length 125 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.62235903341496 33.0 31.0 34.0 30.0 34.0 2 31.791676312500304 33.0 31.0 34.0 30.0 34.0 3 31.850404802738897 34.0 31.0 34.0 30.0 34.0 4 35.244622996061274 37.0 35.0 37.0 33.0 37.0 5 35.076845111455704 37.0 35.0 37.0 33.0 37.0 6 35.09628627795792 37.0 35.0 37.0 33.0 37.0 7 34.983222426388636 37.0 35.0 37.0 32.0 37.0 8 35.01616149354566 37.0 35.0 37.0 33.0 37.0 9 36.719322623459064 39.0 38.0 39.0 33.0 39.0 10-11 36.66336541927015 39.0 38.0 39.0 33.0 39.0 12-13 36.58956794364076 39.0 38.0 39.0 33.0 39.0 14-15 38.00016731381035 41.0 39.0 41.0 33.0 41.0 16-17 38.00440225999868 41.0 39.0 41.0 33.0 41.0 18-19 38.01735498082202 41.0 39.0 41.0 33.0 41.0 20-21 37.960520654795886 41.0 39.0 41.0 33.0 41.0 22-23 37.963013174015494 41.0 39.0 41.0 33.0 41.0 24-25 37.922201763804466 41.0 39.0 41.0 33.0 41.0 26-27 37.838206471150315 41.0 39.0 41.0 33.0 41.0 28-29 37.76485829889927 41.0 38.0 41.0 33.0 41.0 30-31 37.64363474347812 41.0 38.0 41.0 32.5 41.0 32-33 37.51347963847326 41.0 38.0 41.0 32.0 41.0 34-35 37.375060090634136 40.0 38.0 41.0 32.0 41.0 36-37 37.2904522092137 40.0 38.0 41.0 31.5 41.0 38-39 37.20023622668953 40.0 38.0 41.0 31.0 41.0 40-41 37.07230454228797 40.0 37.5 41.0 31.0 41.0 42-43 36.90128189771997 40.0 37.0 41.0 30.5 41.0 44-45 36.73391679212965 40.0 37.0 41.0 30.0 41.0 46-47 36.51068955311905 40.0 36.5 41.0 30.0 41.0 48-49 36.30280039811556 40.0 36.0 41.0 29.5 41.0 50-51 36.05049412629158 40.0 35.5 41.0 28.5 41.0 52-53 35.91426926297595 40.0 35.0 41.0 28.0 41.0 54-55 35.77975406212687 39.5 35.0 41.0 28.0 41.0 56-57 35.57811809293409 39.0 35.0 41.0 28.0 41.0 58-59 35.382056654658385 39.0 35.0 41.0 28.0 41.0 60-61 35.12309999457506 38.5 35.0 41.0 28.0 41.0 62-63 34.77375708398079 37.5 35.0 40.5 27.5 41.0 64-65 34.486657059326845 37.0 35.0 40.0 27.0 41.0 66-67 34.184891965768074 36.5 35.0 39.5 26.5 41.0 68-69 33.82242015801084 36.0 35.0 39.0 26.0 41.0 70-71 33.45709112452606 35.0 34.0 39.0 26.0 41.0 72-73 33.151269946733514 35.0 34.0 37.0 26.0 39.5 74-75 32.83524047801797 35.0 34.0 37.0 26.0 39.0 76-77 32.521202929898465 35.0 34.0 36.5 25.0 39.0 78-79 32.26725252461232 35.0 34.0 36.0 25.0 38.0 80-81 32.024681069798596 35.0 34.0 36.0 25.0 37.0 82-83 31.810277687212874 35.0 34.0 35.0 24.0 37.0 84-85 31.604957322893092 35.0 33.5 35.0 23.5 36.0 86-87 31.482985286590026 35.0 33.0 35.0 23.5 36.0 88-89 31.39002782834194 35.0 33.0 35.0 23.0 36.0 90-91 31.28604645791561 35.0 33.0 35.0 23.0 35.5 92-93 31.2129303227948 35.0 33.0 35.0 23.0 35.0 94-95 31.14804291182965 35.0 33.0 35.0 21.5 35.0 96-97 31.083420302496926 35.0 33.0 35.0 20.0 35.0 98-99 31.011808648861756 35.0 33.0 35.0 20.0 35.0 100-101 30.941737463952332 35.0 33.0 35.0 19.5 35.0 102-103 30.253902332778843 34.0 31.5 35.0 19.0 35.0 104-105 30.76807029435951 35.0 33.0 35.0 19.0 35.0 106-107 30.86896347617403 35.0 33.0 35.0 19.0 35.0 108-109 30.855328609157624 35.0 33.0 35.0 19.0 35.0 110-111 30.786088353508568 35.0 33.0 35.0 18.0 35.0 112-113 30.747450680024556 35.0 33.0 35.0 18.0 35.0 114-115 30.624269311317022 35.0 33.0 35.0 15.0 35.0 116-117 30.81258919598597 35.0 33.0 35.0 17.0 35.0 118-119 30.79833851746536 35.0 33.0 35.0 11.0 35.0 120-121 30.717633908788997 35.0 33.0 35.0 2.0 35.0 122-123 30.58242528216413 35.0 33.0 35.0 2.0 35.0 124-125 29.940213646039176 34.5 32.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 35486.0 3 9774.0 4 5133.0 5 3868.0 6 4133.0 7 4588.0 8 5010.0 9 5231.0 10 5436.0 11 5952.0 12 6481.0 13 8367.0 14 11343.0 15 10365.0 16 5822.0 17 5079.0 18 4680.0 19 4193.0 20 3952.0 21 3992.0 22 4523.0 23 5538.0 24 7429.0 25 9670.0 26 11400.0 27 13261.0 28 15722.0 29 19403.0 30 23167.0 31 29144.0 32 38041.0 33 51470.0 34 80914.0 35 146151.0 36 335987.0 37 680386.0 38 240274.0 39 406.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.84589265931922 17.846094665845747 11.403053522059006 26.90495915277603 2 15.959332492539206 19.443453730182434 37.41387052486609 27.183343252412268 3 18.921781066935882 23.275694861215808 28.327599574252943 29.474924497595367 4 13.441159886886494 14.847277399250213 33.92033202343188 37.791230690431405 5 14.871888269981262 37.31658414564959 32.26147342995169 15.550054154417452 6 35.01215539338809 33.50491886281632 16.312898046805923 15.170027696989665 7 30.585932650715264 31.692459655294535 18.841376478750544 18.880231215239654 8 28.563966844445638 34.275373806037315 18.127973991428995 19.03268535808805 9 28.23888651874841 15.13375293775032 18.167950661913967 38.459409881587305 10-11 27.226009819386704 24.861590719147806 25.700484519820165 22.211914941645325 12-13 27.092907989519034 22.15790077586121 26.46674797986679 24.282443254752966 14-15 24.544598314874705 23.412492929379788 23.988138824658023 28.054769931087485 16-17 24.65539459938178 26.582847168781143 24.611892365962607 24.149865865874474 18-19 24.623280016162795 25.6222515722189 26.49135118405385 23.263117227564447 20-21 25.34488890703607 24.489288270070123 26.516232531251948 23.649590291641864 22-23 25.171428786285265 23.985258682090514 26.3692280091486 24.47408452247562 24-25 24.69524141789251 24.418877910444795 26.29602801987561 24.589852651787083 26-27 24.33043975233482 24.751531793133935 26.520150592977306 24.39787786155394 28-29 24.413748131054852 25.187270519587567 26.285123881486516 24.113857467871064 30-31 24.994944198182058 24.613711227102858 26.26876454466227 24.122580030052816 32-33 24.623577706560894 24.617964273858163 26.247874147375978 24.510583872204965 34-35 24.680530831796194 24.883331310073366 26.378645762273038 24.057492095857402 36-37 24.692717504224763 24.824590334768985 26.347681240539266 24.135010920466986 38-39 24.775564630162037 24.901952621959982 26.291549112316382 24.030933635561595 40-41 24.73588712276495 24.75734595832635 26.269240437792472 24.237526481116227 42-43 24.621689040530782 24.618949602942696 26.107323644676683 24.65203771184984 44-45 24.473593177767583 24.77592795316913 26.198622962725025 24.55185590633826 46-47 24.508193793413326 24.80537105259836 25.976112480988313 24.710322673 48-49 24.509438720494682 25.13533859424043 25.798650118882033 24.556572566382854 50-51 24.57774738806311 25.21271755845738 25.788710674578258 24.420824378901255 52-53 24.811562006345632 25.037666113603684 25.596037712843756 24.55473416720693 54-55 24.34571601610917 24.905374065524413 25.86894311432328 24.87996680404314 56-57 24.531658426683848 25.05398802366906 25.536704470592408 24.877649079054688 58-59 24.566403975601528 25.082449042731703 25.76793092113037 24.583216060536397 60-61 24.780095076165402 24.96545626864321 25.94162384676307 24.31282480842832 62-63 24.590567220938336 25.016375699777495 25.85840491687268 24.53465216241149 64-65 24.405203432645585 24.75261458041832 25.9052267974955 24.93695518944059 66-67 24.457349059512463 25.058897971417434 25.71588026818586 24.76787270088425 68-69 24.39904101160546 25.086591753419558 25.777096699428792 24.737270535546195 70-71 24.30425116730253 24.93093941198998 25.891610729783633 24.873198690923857 72-73 24.450758181053008 25.252594971707698 25.587633622679608 24.70901322455969 74-75 24.374324530474823 25.24187986257485 25.609184881514857 24.77461072543547 76-77 24.34050287889209 24.842022827563778 25.573676889985475 25.24379740355866 78-79 24.278440857529432 25.010782767123917 25.733993566327047 24.976782809019603 80-81 24.43630285357329 25.207853167763382 25.50445248099793 24.851391497665396 82-83 24.43624268865277 25.199163542664323 25.567571109885208 24.797022658797708 84-85 24.40242505235713 25.232780425549745 25.324496047499828 25.040298474593296 86-87 24.113438226290988 25.374334437479153 25.48173217866215 25.03049515756771 88-89 24.062154307753417 25.09400412030916 25.530017803108734 25.313823768828687 90-91 24.23462043361214 24.946152986750146 25.623309391778516 25.1959171878592 92-93 24.259428254065618 25.110445914132296 25.595897669477075 25.03422816232501 94-95 24.277169913681508 24.96801327811528 25.518904662917425 25.235912145285788 96-97 24.038660638967286 24.88171673948839 25.662277489561504 25.41734513198282 98-99 23.889113288744603 24.90404220531584 25.49963582768096 25.707208678258592 100-101 23.920960204020794 25.11979185410021 25.55212214606415 25.407125795814846 102-103 23.852397180164033 24.925855631252386 25.745572890299634 25.476174298283944 104-105 23.95474523988181 24.977078276544216 25.552632412901477 25.515544070672497 106-107 24.023987005829976 24.842245877283727 25.55463706883494 25.579130048051358 108-109 23.934139521792574 24.816467106957614 25.601787805761706 25.647605565488107 110-111 23.76591832821365 25.234091877134055 25.521103853378158 25.478885941274132 112-113 23.728634214530008 25.217864206996847 25.512745281029993 25.540756297443156 114-115 23.65511118177262 25.27193194007211 25.48192017170748 25.591036706447785 116-117 23.559026747340454 25.1291469012935 25.504468543212212 25.807357808153842 118-119 23.649800412576464 24.950348213784544 25.511739038537307 25.88811233510168 120-121 23.524149379510124 25.09584579160768 25.627694257094735 25.752310571787458 122-123 23.423527462295425 25.159373458266405 25.459361077398686 25.957738002039488 124-125 23.27645840306595 25.10406458819781 25.409395991197897 26.21008101753834 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 57.0 2 49.5 3 78.5 4 79.0 5 79.0 6 190.0 7 495.5 8 844.5 9 958.5 10 802.5 11 642.5 12 648.0 13 713.5 14 766.5 15 803.0 16 868.0 17 954.5 18 1007.0 19 1062.5 20 1177.5 21 1278.0 22 1401.5 23 1598.0 24 1820.5 25 2176.0 26 2735.0 27 3524.0 28 4560.0 29 5972.0 30 7766.5 31 9865.5 32 12590.0 33 15162.0 34 17572.5 35 20248.5 36 23583.0 37 27255.5 38 30710.0 39 34496.5 40 38352.5 41 42283.0 42 46237.5 43 51269.5 44 56892.0 45 62099.5 46 67260.0 47 72235.5 48 77765.0 49 82798.0 50 85107.0 51 86028.5 52 85977.0 53 85147.5 54 84541.0 55 82514.5 56 77450.0 57 70167.0 58 63828.5 59 57657.5 60 50065.5 61 43022.0 62 36535.0 63 28517.5 64 21017.5 65 16124.5 66 12463.0 67 9611.0 68 7431.0 69 5785.0 70 4607.5 71 3528.5 72 2706.0 73 2351.0 74 1907.0 75 1439.5 76 1036.5 77 584.5 78 314.0 79 203.0 80 127.0 81 65.0 82 34.0 83 18.5 84 11.5 85 9.0 86 8.0 87 2.5 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.023901972906442307 2 0.002094779647980337 3 0.030723434837044945 4 0.16688411195576686 5 0.02293515153045138 6 0.06875174229268799 7 0.05339002487416551 8 0.045440604671573466 9 0.035074131029004106 10-11 0.06262854024474546 12-13 0.05717674193012997 14-15 0.057928714111456246 16-17 0.05086554683685588 18-19 0.03797459515697688 20-21 0.02400939750377463 22-23 0.003491299413300562 24-25 0.00496838762662003 26-27 0.0034375871146343994 28-29 0.00496838762662003 30-31 0.0026050464853088805 32-33 0.00886252927991681 34-35 0.004780394581288461 36-37 0.006928886527934962 38-39 0.002336484991978068 40-41 0.0035987240106328867 42-43 0.004028422399962187 44-45 0.004995243775953111 46-47 0.004699826133289217 48-49 0.0027661833813073682 50-51 0.0016113689599848748 52-53 9.668213759909248E-4 54-55 0.005290661418617004 56-57 8.325406293255187E-4 58-59 8.056844799924374E-4 60-61 2.6856149333081245E-5 62-63 9.93677525324006E-4 64-65 0.0 66-67 0.004135846997294511 68-69 9.399652266578436E-4 70-71 0.0 72-73 0.002443909589310393 74-75 0.0055323667626147365 76-77 0.001638225109317956 78-79 2.1484919466464996E-4 80-81 0.0 82-83 0.005908352853277874 84-85 0.0020410673493141745 86-87 0.0 88-89 9.399652266578436E-4 90-91 8.056844799924374E-4 92-93 0.0 94-95 0.003276450218635912 96-97 0.001745649706650281 98-99 8.056844799924374E-4 100-101 0.0 102-103 0.0016919374079841184 104-105 0.0 106-107 6.982598826601123E-4 108-109 0.002551334186642718 110-111 1.0742459733232498E-4 112-113 1.879930453315687E-4 114-115 0.0 116-117 0.001853074303982606 118-119 0.002981032575972018 120-121 0.0030347448746381807 122-123 0.0014770882133194685 124-125 0.10680690589766412 >>END_MODULE >>Sequence Length Distribution pass #Length Count 125 1861771.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.701973837131646 #Duplication Level Percentage of deduplicated Percentage of total 1 79.2330776726293 47.30371130246734 2 11.14971481505044 13.31319964359241 3 3.8228077470750828 6.846875043007823 4 1.781314916368267 4.253920661308426 5 0.9759870254390355 2.9134175929070616 6 0.6395552318222079 2.290962583059007 7 0.4390249760293009 1.8347460342924071 8 0.3318115061614406 1.5847841487767658 9 0.23905585320445344 1.2844895664262919 >10 1.3103400890139265 13.682343900387817 >50 0.05932982496867713 2.395725329198727 >100 0.017438402044705304 1.7469233289364152 >500 1.8064673110140575E-4 0.07964697696723848 >1k 3.612934622028115E-4 0.46925388867224727 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3231 0.173544436990371 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2746 0.1474939721372822 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 5.371229866616249E-5 0.0 6 0.0 0.0 0.0 5.371229866616249E-5 1.6113689599848746E-4 7 0.0 0.0 0.0 5.371229866616249E-5 1.6113689599848746E-4 8 0.0 0.0 0.0 5.371229866616249E-5 1.6113689599848746E-4 9 0.0 0.0 0.0 5.371229866616249E-5 2.1484919466464996E-4 10-11 0.0 0.0 0.0 1.0742459733232498E-4 2.1484919466464996E-4 12-13 0.0 0.0 0.0 1.0742459733232498E-4 2.954176426638937E-4 14-15 0.0 0.0 0.0 1.0742459733232498E-4 3.4912994133005616E-4 16-17 0.0 0.0 0.0 1.6113689599848746E-4 4.296983893292999E-4 18-19 0.0 0.0 0.0 2.1484919466464996E-4 4.296983893292999E-4 20-21 0.0 0.0 0.0 2.1484919466464996E-4 4.834106879954624E-4 22-23 0.0 0.0 0.0 2.6856149333081246E-4 5.371229866616249E-4 24-25 0.0 0.0 0.0 6.176914346608686E-4 6.445475839939499E-4 26-27 0.0 0.0 0.0 9.668213759909249E-4 6.982598826601123E-4 28-29 0.0 0.0 0.0 0.003625580159965968 6.982598826601123E-4 30-31 0.0 0.0 0.0 0.011682424959890341 6.982598826601123E-4 32-33 0.0 0.0 0.0 0.02895092898106158 8.056844799924373E-4 34-35 0.0 0.0 0.0 0.05220835430350994 8.056844799924373E-4 36-37 0.0 0.0 0.0 0.08234095385522709 8.056844799924373E-4 38-39 0.0 0.0 0.0 0.13124600179076804 8.056844799924373E-4 40-41 0.0 0.0 0.0 0.18458231436626737 8.056844799924373E-4 42-43 0.0 0.0 0.0 0.2410876525630703 8.86252927991681E-4 44-45 0.0 0.0 0.0 0.30573040400779683 9.668213759909248E-4 46-47 0.0 2.6856149333081245E-5 0.0 0.3755563922738081 0.0010205336746570873 48-49 0.0 5.371229866616249E-5 0.0 0.44962565213444616 0.0011279582719894122 50-51 0.0 5.371229866616249E-5 0.0 0.5226743783204272 0.0011279582719894122 52-53 0.0 5.371229866616249E-5 0.0 0.5970390558237291 0.0013428074666540623 54-55 0.0 5.371229866616249E-5 0.0 0.6799708449642841 0.0015039443626525496 56-57 0.0 5.371229866616249E-5 0.0 0.7746656275127285 0.0015039443626525496 58-59 0.0 5.371229866616249E-5 0.0 0.8772292618157658 0.0015039443626525496 60-61 0.0 5.371229866616249E-5 0.0 0.9818608196174502 0.0015039443626525496 62-63 0.0 5.371229866616249E-5 0.0 1.091514477344421 0.0015039443626525496 64-65 0.0 5.371229866616249E-5 0.0 1.2076404670606644 0.0015308005119856309 66-67 0.0 5.371229866616249E-5 0.0 1.338725331955434 0.0015576566613187122 68-69 0.0 5.371229866616249E-5 0.0 1.480552656583436 0.0015576566613187122 70-71 0.0 5.371229866616249E-5 0.0 1.6309202366993578 0.0015845128106517932 72-73 0.0 5.371229866616249E-5 0.0 1.7773936751619828 0.0016919374079841184 74-75 0.0 5.371229866616249E-5 0.0 1.9321656637685303 0.0017187935573171997 76-77 0.0 5.371229866616249E-5 0.0 2.1161302867001366 0.0017187935573171997 78-79 0.0 5.371229866616249E-5 0.0 2.3232180542075263 0.0017187935573171997 80-81 0.0 5.371229866616249E-5 0.0 2.5292315757415924 0.0017993620053164433 82-83 0.0 5.371229866616249E-5 0.0 2.7293904567210467 0.0019336427519818496 84-85 0.0 5.371229866616249E-5 0.0 2.945985301092347 0.0019336427519818496 86-87 0.0 5.371229866616249E-5 0.0 3.1964188936233295 0.0019336427519818496 88-89 0.0 5.371229866616249E-5 0.0 3.4774416402446917 0.0019336427519818496 90-91 0.0 5.371229866616249E-5 0.0 3.7735575427912456 0.001960498901314931 92-93 0.0 5.371229866616249E-5 0.0 4.060058943876556 0.0021484919466464997 94-95 0.0 5.371229866616249E-5 0.0 4.355933141079112 0.0022559165439788244 96-97 0.0 5.371229866616249E-5 0.0 4.688439125971991 0.0024976218879765558 98-99 0.0 5.371229866616249E-5 0.0 5.072401492987054 0.002631902634641962 100-101 0.0 5.371229866616249E-5 0.0 5.476855101943258 0.002631902634641962 102-103 0.0 5.371229866616249E-5 0.0 5.885766831688752 0.002631902634641962 104-105 0.0 5.371229866616249E-5 0.0 6.306495267140804 0.002631902634641962 106-107 0.0 5.371229866616249E-5 0.0 6.766030838379156 0.002631902634641962 108-109 0.0 5.371229866616249E-5 0.0 7.2620102042625 0.0026856149333081246 110-111 0.0 5.371229866616249E-5 0.0 7.792848851980184 0.0029004641279727745 112-113 0.0 5.371229866616249E-5 0.0 8.322210411484548 0.0029004641279727745 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2925 0.0 58.334522 1 GTATCAA 5105 0.0 55.51155 1 TCAACGC 6660 0.0 42.357666 4 CAACGCA 6745 0.0 41.955532 5 TATCAAC 6890 0.0 41.122356 2 AACGCAG 6950 0.0 40.814693 6 ATCAACG 6935 0.0 40.59639 3 GTACATG 9875 0.0 37.155533 1 TACATGG 10265 0.0 35.67903 2 ACATGGG 10505 0.0 34.806175 3 ACGCAGA 8175 0.0 34.62397 7 CATGGGG 9015 0.0 33.211086 4 CGCAGAG 8720 0.0 32.523933 8 ATGGGGG 5650 0.0 30.05204 5 GCAGAGT 9780 0.0 28.755156 9 GTGGTAT 1565 0.0 25.160257 1 AGAGTAC 8905 0.0 24.85636 10-11 GTATAGG 485 0.0 24.602188 1 GAGTACT 4550 0.0 24.468319 12-13 CAGAGTA 9410 0.0 23.838997 10-11 >>END_MODULE