##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921578_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7362907 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.025378155665962 31.0 28.0 31.0 16.0 34.0 2 27.99355662104655 31.0 28.0 33.0 16.0 34.0 3 28.088196550628712 31.0 28.0 34.0 16.0 34.0 4 31.489849457557998 35.0 32.0 37.0 17.0 37.0 5 31.403137646584426 35.0 32.0 37.0 17.0 37.0 6 31.49746316230804 35.0 32.0 37.0 17.0 37.0 7 31.29295344895705 35.0 32.0 37.0 17.0 37.0 8 31.232168218340934 35.0 32.0 37.0 17.0 37.0 9 32.464003823489826 37.0 32.0 39.0 16.0 39.0 10-11 32.2276388252629 37.0 32.0 39.0 13.0 39.0 12-13 32.02819042804697 37.0 32.0 39.0 10.0 39.0 14-15 32.73420824139161 38.0 31.5 40.0 10.0 41.0 16-17 32.577729081733615 38.0 31.0 40.0 10.0 41.0 18-19 32.37982355338727 37.5 31.0 40.0 10.0 41.0 20-21 32.23141260646101 37.0 31.0 40.0 8.5 41.0 22-23 31.99729868922696 37.0 30.5 40.0 8.0 41.0 24-25 32.11029481969554 37.0 31.0 40.0 5.0 41.0 26-27 31.864196369721903 37.0 30.0 40.0 2.0 41.0 28-29 31.661968363854115 37.0 30.0 40.0 2.0 41.0 30-31 31.40288788110457 37.0 30.0 40.0 2.0 41.0 32-33 31.15388378530382 37.0 30.0 40.0 2.0 41.0 34-35 30.801934140958185 36.0 29.0 40.0 2.0 41.0 36-37 30.492865589637354 36.0 28.0 39.0 2.0 41.0 38-39 30.26459386217971 36.0 27.5 39.0 2.0 40.5 40-41 30.020830291622588 35.5 27.0 39.0 2.0 40.0 42-43 29.756570604518025 35.0 27.0 39.0 2.0 40.0 44-45 29.476943549606155 35.0 26.0 39.0 2.0 40.0 46-47 29.174912707711776 35.0 25.5 39.0 2.0 40.0 48-49 28.8712409378524 35.0 24.5 39.0 2.0 40.0 50-51 27.953828969997858 33.5 23.5 38.0 2.0 39.5 52-53 28.16379773641036 33.5 24.0 38.0 2.0 39.5 54-55 28.716521341366935 35.0 25.5 39.0 2.0 40.0 56-57 28.675014162205226 35.0 25.5 39.0 2.0 40.0 58-59 28.410728670075557 34.0 25.0 38.5 2.0 40.0 60-61 28.05198911245246 34.0 23.5 38.0 2.0 40.0 62-63 27.618462992945588 34.0 22.5 38.0 2.0 40.0 64-65 27.124255406186712 33.5 22.0 37.0 2.0 40.0 66-67 26.75558627862609 33.0 21.0 37.0 2.0 39.0 68-69 26.288221825971725 33.0 19.5 36.0 2.0 39.0 70-71 25.847802165639198 32.0 18.0 36.0 2.0 39.0 72-73 25.361863255912372 32.0 15.0 35.0 2.0 38.0 74-75 24.90043905212982 31.5 9.5 35.0 2.0 37.0 76-77 24.464625452963077 31.0 7.0 35.0 2.0 36.5 78-79 24.062106719533467 31.0 4.0 35.0 2.0 36.0 80-81 23.610955020890525 31.0 2.0 34.0 2.0 36.0 82-83 23.06968219210157 30.0 2.0 34.0 2.0 35.0 84-85 22.641754133251986 30.0 2.0 34.0 2.0 35.0 86-87 22.13864965291562 30.0 2.0 34.0 2.0 35.0 88-89 21.617415173110295 29.0 2.0 34.0 2.0 35.0 90-91 21.016847897168876 29.0 2.0 34.0 2.0 35.0 92-93 20.461385699968776 29.0 2.0 34.0 2.0 35.0 94-95 19.774620947948954 27.0 2.0 34.0 2.0 35.0 96-97 19.12312086788547 26.5 2.0 33.0 2.0 35.0 98 18.63760074655296 25.0 2.0 33.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 484606.0 3 81446.0 4 58369.0 5 47301.0 6 43694.0 7 46190.0 8 52631.0 9 59744.0 10 63548.0 11 66481.0 12 67118.0 13 65596.0 14 64100.0 15 66351.0 16 69965.0 17 74522.0 18 76803.0 19 79015.0 20 82747.0 21 87279.0 22 93656.0 23 103289.0 24 117059.0 25 131724.0 26 150629.0 27 172558.0 28 198627.0 29 227218.0 30 261323.0 31 303519.0 32 357717.0 33 427821.0 34 522449.0 35 643917.0 36 778517.0 37 759571.0 38 352822.0 39 22985.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.346565880118334 16.80712561695628 12.561804570910004 25.28450393201538 2 16.39735596488854 18.204376216739618 38.86811851511358 26.53014930325826 3 20.725162909251825 21.677303348538697 27.42162833231815 30.175905409891335 4 13.860926076139746 14.208233525503777 34.42698010461379 37.50386029374268 5 15.426745176171815 35.95955895651001 33.1376850791962 15.476010788121968 6 36.18337747738775 32.769884628507164 16.093663569721087 14.953074324384 7 31.744981943965158 29.917382431980784 18.857211952578794 19.48042367147527 8 28.072623061334628 34.14604726812524 18.341463189349465 19.439866481190673 9 27.121606720966916 15.682776815967458 18.245979435158212 38.94963702790741 10-11 27.032091945680314 24.437651420346278 26.083829454681666 22.446427179291742 12-13 27.233101442212547 21.370003451270065 26.40831445049899 24.988580656018392 14-15 24.27934766213179 23.014903289677026 23.5063686755794 29.199380372611785 16-17 24.894392728050622 26.222793432291517 24.250565786591917 24.632248053065943 18-19 24.986250740965318 25.494893496320227 25.44823263848196 24.070623124232498 20-21 25.417346120281625 24.690928046125563 25.40267801072974 24.489047822863068 22-23 25.241952229783166 24.373373173000424 25.267889701851615 25.116784895364795 24-25 24.990017515895865 24.713280495707462 25.275554615672323 25.021147372724347 26-27 24.88946508488542 24.833532450340755 25.28848972304103 24.988512741732794 28-29 24.96044972237656 24.93597932632184 25.237359443064662 24.86621150823694 30-31 25.137180070035807 24.831702720903984 25.059315693226043 24.97180151583417 32-33 24.896620379737698 24.823585801502027 25.09223731340881 25.187556505351466 34-35 25.110303040868992 24.83681660398205 25.192112661783923 24.860767693365037 36-37 25.238680491552923 24.675385398262478 25.093925682534806 24.99200842764979 38-39 25.142786938563134 24.788176405401725 25.05375442138846 25.01528223464668 40-41 25.24318204814684 24.667540420185276 25.17089467295397 24.91838285871392 42-43 25.14155926646413 24.580758403429467 25.07131780368686 25.206364526419538 44-45 25.00007492324454 24.67599783458201 25.19232115753416 25.13160608463929 46-47 25.280408596258898 24.674655460449355 25.026500422521835 25.018435520769916 48-49 25.07730630241844 24.724081206081845 24.935015028072748 25.26359746342697 50-51 24.93822177334434 24.845588489715116 25.104348669499977 25.111841067440572 52-53 25.087420164109233 24.75863203422613 25.15234645015122 25.00160135151342 54-55 24.80142306458304 24.54819109852881 25.34891702062614 25.30146881626201 56-57 24.865531038970452 24.727621841590537 25.295308525845776 25.11153859359323 58-59 24.94945314036222 24.59221106011945 25.311265467236883 25.14707033228145 60-61 24.916176458567765 24.48594222128979 25.40902972854414 25.1888515915983 62-63 24.759409776324638 24.55291663473737 25.51878549473379 25.168888094204195 64-65 24.74220145960259 24.475859821251685 25.44882602573721 25.333112693408516 66-67 24.70255677903978 24.737247074628904 25.252763537562483 25.30743260876883 68-69 24.737554409451697 24.507591184086852 25.39160194544761 25.36325246101384 70-71 24.695493305000014 24.355925215615486 25.517680790060528 25.43090068932397 72-73 24.745774321774906 24.398488430737455 25.42094047312562 25.434796774362017 74-75 24.466249228298192 24.53737378743758 25.52654095949461 25.46983602476962 76-77 24.57988559838082 24.2822801674085 25.595095120447407 25.542739113763268 78-79 24.54302858540792 24.144008202100785 25.660039181671863 25.65292403081943 80-81 24.48583831228703 24.362856300789055 25.572183952603993 25.57912143431992 82-83 24.51973752880179 24.306998675905753 25.59495897772598 25.578304817566476 84-85 24.403782604992532 24.282349919897047 25.630262256064878 25.683605219045543 86-87 24.345855562511794 24.22756696802402 25.8127158298801 25.61386163958408 88-89 24.32996886347425 24.044105254735594 25.731899021642352 25.8940268601478 90-91 24.293200247663314 24.017758554413145 25.830113968970736 25.858927228952805 92-93 24.327953987957265 24.063375483626416 25.88672331122885 25.721947217187473 94-95 24.25773196788802 23.829427413220923 25.985861353788277 25.926979265102784 96-97 24.187778798474746 23.740965901307348 26.061207865497497 26.010047434720406 98 24.212674258285247 23.758212054673272 26.00718310098895 26.021930586052527 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 56.0 1 50.5 2 98.0 3 192.0 4 225.5 5 285.5 6 446.0 7 795.0 8 1204.0 9 1422.0 10 1519.0 11 1627.0 12 1856.0 13 2128.0 14 2440.0 15 2624.0 16 2682.5 17 2751.5 18 2714.5 19 2605.5 20 2526.5 21 2442.0 22 2466.0 23 2701.5 24 2987.0 25 3603.0 26 4537.0 27 5850.5 28 7785.0 29 10787.5 30 15680.5 31 23060.5 32 33158.0 33 44907.0 34 59157.0 35 76640.0 36 95889.0 37 115290.0 38 133713.5 39 151494.0 40 169072.5 41 187283.5 42 207890.5 43 231896.0 44 255092.5 45 275900.0 46 295633.5 47 315129.0 48 331269.5 49 340309.0 50 343406.0 51 346796.5 52 354326.0 53 360959.5 54 360075.5 55 351310.5 56 333457.5 57 310171.5 58 286457.0 59 255648.0 60 219634.5 61 182738.0 62 147686.0 63 113382.0 64 82443.5 65 60915.5 66 45332.5 67 33172.0 68 23931.5 69 17467.5 70 12742.0 71 9221.5 72 6903.0 73 5020.0 74 3696.5 75 2674.5 76 1785.0 77 1107.5 78 670.5 79 422.0 80 272.5 81 177.5 82 108.0 83 69.0 84 52.5 85 36.0 86 24.5 87 27.5 88 30.0 89 20.5 90 12.5 91 12.5 92 12.0 93 13.5 94 9.5 95 6.5 96 10.0 97 9.5 98 6.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.2661856247810817 2 0.1324476867628506 3 0.13011165291100377 4 0.1248419951521865 5 0.12078109909577835 6 0.044683438212651604 7 0.03377741970664576 8 0.012875349369481374 9 0.008597147838482816 10-11 0.0016976990202375228 12-13 0.005432636864760074 14-15 0.010057168995887086 16-17 0.005018398303822118 18-19 0.04644225439761768 20-21 0.092524596602945 22-23 0.09173686425755478 24-25 0.06816601106057703 26-27 0.07935045220590183 28-29 0.0961576725062533 30-31 0.07119470611268078 32-33 0.018002400410598692 34-35 0.2833255940893997 36-37 0.3674363943480476 38-39 0.3414208545619278 40-41 0.3372920505447101 42-43 0.3154324779601318 44-45 0.29962350468367993 46-47 0.30501539677195433 48-49 0.29850981412640415 50-51 0.3006013793193368 52-53 0.3443612692649792 54-55 0.3310988445188836 56-57 0.3163831894114648 58-59 0.29806841238114234 60-61 0.30540926294464943 62-63 0.3051715850818162 64-65 0.32119107303677746 66-67 0.3411695951069326 68-69 0.3040307313402166 70-71 0.28230697467725724 72-73 0.26725177976579084 74-75 0.25464127144346654 76-77 0.257439079428818 78-79 0.2637884737645063 80-81 0.2545665726865761 82-83 0.2634353523682969 84-85 0.2569705144992324 86-87 0.2523595639602673 88-89 0.2749525425215883 90-91 0.25894663615878893 92-93 0.2498333878181539 94-95 0.26372056580369685 96-97 0.26268157400331144 98 0.2618802600657594 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 7362907.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.22218486374126 #Duplication Level Percentage of deduplicated Percentage of total 1 76.23703478847868 38.2879045461045 2 11.472947240258966 11.523929544644718 3 4.484838512420475 6.757151665644223 4 2.3165743896261657 4.653737089856555 5 1.3104591956680725 3.290706199061581 6 0.848141253191845 2.5557304085019608 7 0.5935606416911097 2.086693859239626 8 0.4404511262345064 1.7696334308153934 9 0.31496492012003174 1.423640379947556 >10 1.7781852575781238 16.347817739934346 >50 0.135067754270969 4.661013034760318 >100 0.06531663329601083 5.669871042095282 >500 0.0020213156702692378 0.6402566212667585 >1k 4.369714947982956E-4 0.33191443812719906 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.3581592161900184E-5 0.0 1.3581592161900184E-5 0.0 3 0.0 1.3581592161900184E-5 0.0 1.3581592161900184E-5 0.0 4 0.0 1.3581592161900184E-5 0.0 1.3581592161900184E-5 1.3581592161900184E-5 5 1.3581592161900184E-5 1.3581592161900184E-5 0.0 1.3581592161900184E-5 2.7163184323800368E-5 6 1.3581592161900184E-5 1.3581592161900184E-5 0.0 1.3581592161900184E-5 4.0744776485700555E-5 7 1.3581592161900184E-5 1.3581592161900184E-5 0.0 2.7163184323800368E-5 5.4326368647600735E-5 8 1.3581592161900184E-5 1.3581592161900184E-5 0.0 2.7163184323800368E-5 8.148955297140111E-5 9 1.3581592161900184E-5 1.3581592161900184E-5 0.0 4.0744776485700555E-5 1.2223432945710166E-4 10-11 1.3581592161900184E-5 1.3581592161900184E-5 0.0 6.790796080950092E-5 1.2902512553805175E-4 12-13 2.0372388242850277E-5 4.0744776485700555E-5 6.790796080950092E-6 1.0186194121425139E-4 1.6297910594280222E-4 14-15 2.7163184323800368E-5 4.0744776485700555E-5 1.3581592161900184E-5 1.2223432945710166E-4 2.1730547459040294E-4 16-17 2.7163184323800368E-5 4.0744776485700555E-5 1.3581592161900184E-5 1.3581592161900183E-4 2.7163184323800366E-4 18-19 2.7163184323800368E-5 4.0744776485700555E-5 1.3581592161900184E-5 1.4939751378090203E-4 2.7163184323800366E-4 20-21 2.7163184323800368E-5 4.0744776485700555E-5 1.3581592161900184E-5 1.6297910594280222E-4 2.7163184323800366E-4 22-23 2.7163184323800368E-5 4.7535572566650645E-5 1.3581592161900184E-5 2.512594549951534E-4 3.1237661972370427E-4 24-25 2.7163184323800368E-5 5.4326368647600735E-5 1.3581592161900184E-5 3.5991219229035486E-4 3.66702988371305E-4 26-27 2.7163184323800368E-5 6.790796080950092E-5 1.3581592161900184E-5 6.111716472855083E-4 3.8028458053320516E-4 28-29 2.7163184323800368E-5 6.790796080950092E-5 1.3581592161900184E-5 0.002505803753870584 3.938661726951053E-4 30-31 2.7163184323800368E-5 8.148955297140111E-5 1.3581592161900184E-5 0.010457825964663141 4.0065696877605546E-4 32-33 2.7163184323800368E-5 8.148955297140111E-5 1.3581592161900184E-5 0.027944125873109626 4.0744776485700555E-4 34-35 2.7163184323800368E-5 8.148955297140111E-5 1.3581592161900184E-5 0.05004137632052123 4.0744776485700555E-4 36-37 2.7163184323800368E-5 8.148955297140111E-5 1.3581592161900184E-5 0.087900064471818 4.0744776485700555E-4 38-39 2.7163184323800368E-5 8.828034905235119E-5 1.3581592161900184E-5 0.15375041406879103 4.1423856093795563E-4 40-41 2.7163184323800368E-5 1.0865273729520147E-4 1.3581592161900184E-5 0.23061543490906514 4.346109491808059E-4 42-43 2.7163184323800368E-5 1.1544353337615157E-4 1.3581592161900184E-5 0.3114734438449379 4.481925413427061E-4 44-45 2.7163184323800368E-5 1.2223432945710166E-4 1.3581592161900184E-5 0.4074409740609246 4.549833374236562E-4 46-47 2.7163184323800368E-5 1.2223432945710166E-4 1.3581592161900184E-5 0.5224634780800572 4.6177413350460627E-4 48-49 2.7163184323800368E-5 1.2223432945710166E-4 1.3581592161900184E-5 0.6513459969004091 4.7535572566650644E-4 50-51 2.7163184323800368E-5 1.2223432945710166E-4 1.3581592161900184E-5 0.7937489907179325 4.7535572566650644E-4 52-53 3.395398040475046E-5 1.2223432945710166E-4 1.3581592161900184E-5 0.9413876883138684 5.025189099903068E-4 54-55 4.0744776485700555E-5 1.2223432945710166E-4 1.3581592161900184E-5 1.1094734729095452 5.568452786379076E-4 56-57 4.0744776485700555E-5 1.2223432945710166E-4 2.7163184323800368E-5 1.3048922117310457 5.568452786379076E-4 58-59 4.0744776485700555E-5 1.2223432945710166E-4 2.7163184323800368E-5 1.519053547735969 5.840084629617079E-4 60-61 4.0744776485700555E-5 1.2223432945710166E-4 2.7163184323800368E-5 1.7558825610591033 5.975900551236081E-4 62-63 4.0744776485700555E-5 1.2902512553805175E-4 2.7163184323800368E-5 1.9988708264276598 5.975900551236081E-4 64-65 4.0744776485700555E-5 1.3581592161900183E-4 2.7163184323800368E-5 2.25639818620553 5.975900551236081E-4 66-67 4.0744776485700555E-5 1.3581592161900183E-4 2.7163184323800368E-5 2.5548468831672055 6.043808512045582E-4 68-69 4.0744776485700555E-5 1.4939751378090203E-4 2.7163184323800368E-5 2.8910591971350446 6.111716472855083E-4 70-71 4.0744776485700555E-5 1.4939751378090203E-4 2.7163184323800368E-5 3.262033596241267 6.383348316093087E-4 72-73 4.0744776485700555E-5 1.6297910594280222E-4 2.7163184323800368E-5 3.640722339695449 7.198243845807098E-4 74-75 4.0744776485700555E-5 1.697699020237523E-4 2.7163184323800368E-5 4.029773837969161 7.198243845807098E-4 76-77 4.7535572566650645E-5 1.7656069810470239E-4 2.7163184323800368E-5 4.459943606513026 7.3340597674261E-4 78-79 8.148955297140111E-5 1.7656069810470239E-4 3.395398040475046E-5 4.936881587666393 7.3340597674261E-4 80-81 9.507114513330129E-5 1.969330863475527E-4 4.0744776485700555E-5 5.45698186871028 7.673599571473604E-4 82-83 9.507114513330129E-5 2.1730547459040294E-4 4.0744776485700555E-5 5.991166260826057 8.284771218759113E-4 84-85 9.507114513330129E-5 2.2409627067135302E-4 4.0744776485700555E-5 6.53003630223769 8.284771218759113E-4 86 9.507114513330129E-5 2.3088706675230313E-4 4.0744776485700555E-5 6.945205202238736 8.284771218759113E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10225 0.0 40.909374 1 GGTATCA 5860 0.0 38.55726 1 TCAACGC 12555 0.0 32.82936 4 CAACGCA 12855 0.0 31.84853 5 TATCAAC 13545 0.0 30.566402 2 ATCAACG 13670 0.0 30.084799 3 AACGCAG 13935 0.0 29.581026 6 GTACATG 24110 0.0 26.03391 1 TACATGG 25205 0.0 24.101458 2 ACGCAGA 16850 0.0 23.832325 7 ACATGGG 25755 0.0 22.801422 3 CGCAGAG 17890 0.0 22.138136 8 GAGTACA 17855 0.0 20.876007 1 AGTACAT 17165 0.0 19.99748 2 CATGGGG 20430 0.0 18.982822 4 GCAGAGT 19545 0.0 18.852686 9 GTATAGG 1790 0.0 18.509802 1 AGAGTAC 16280 0.0 17.377066 10-11 GTGTAGC 3920 0.0 16.786966 1 GTATTAC 1290 0.0 16.052588 1 >>END_MODULE