##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921577_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6493615 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.43001579243611 31.0 28.0 31.0 20.0 34.0 2 28.40111201541822 31.0 28.0 33.0 16.0 34.0 3 28.497118015157966 31.0 28.0 34.0 16.0 34.0 4 31.944362269706474 35.0 32.0 37.0 20.0 37.0 5 31.883595963111457 35.0 32.0 37.0 20.0 37.0 6 31.97994861105871 35.0 32.0 37.0 22.0 37.0 7 31.78749094302634 35.0 32.0 37.0 19.0 37.0 8 31.746343446601006 35.0 32.0 37.0 18.0 37.0 9 33.01415451947798 37.0 32.0 39.0 18.0 39.0 10-11 32.79077978906973 37.0 32.0 39.0 17.0 39.0 12-13 32.60705985802977 37.0 32.0 39.0 17.0 39.0 14-15 33.34481317417186 38.0 32.0 40.0 17.0 41.0 16-17 33.201314599033054 38.0 32.0 40.0 16.5 41.0 18-19 33.02768419439711 38.0 32.0 40.0 14.0 41.0 20-21 32.894915466962544 38.0 32.0 40.0 11.0 41.0 22-23 32.670495479020545 37.5 31.0 40.0 10.0 41.0 24-25 32.779941681174506 38.0 31.5 40.0 10.0 41.0 26-27 32.55028316276835 38.0 31.0 40.0 10.0 41.0 28-29 32.365325477411275 37.0 31.0 40.0 9.0 41.0 30-31 32.12125518682583 37.0 30.0 40.0 8.0 41.0 32-33 31.883340096386988 37.0 30.0 40.0 8.0 41.0 34-35 31.5465723637758 37.0 30.0 40.0 2.0 41.0 36-37 31.24865125203758 37.0 30.0 40.0 2.0 41.0 38-39 31.033799894203767 36.0 29.5 40.0 2.0 41.0 40-41 30.806872212165334 36.0 29.0 39.0 2.0 41.0 42-43 30.558849269628706 36.0 28.5 39.0 2.0 40.0 44-45 30.291452449829563 35.5 28.0 39.0 2.0 40.0 46-47 29.996617754517324 35.0 27.0 39.0 2.0 40.0 48-49 29.707920780643754 35.0 27.0 39.0 2.0 40.0 50-51 28.759964287996745 34.0 25.0 38.0 2.0 39.5 52-53 28.9605228366634 34.5 26.5 38.0 2.0 39.5 54-55 29.54527339548156 35.0 27.0 39.0 2.0 40.0 56-57 29.518113793318513 35.0 27.0 39.0 2.0 40.0 58-59 29.262829564117986 35.0 26.5 39.0 2.0 40.0 60-61 28.906270159225638 34.0 26.0 38.0 2.0 40.0 62-63 28.4775569540233 34.0 26.0 38.0 2.0 40.0 64-65 27.99664431907343 34.0 25.0 37.5 2.0 40.0 66-67 27.63477515990708 34.0 24.5 37.0 2.0 39.5 68-69 27.16563947816432 33.0 23.0 36.0 2.0 39.0 70-71 26.732919490915307 33.0 22.0 36.0 2.0 39.0 72-73 26.251628176293174 32.5 21.0 35.0 2.0 38.0 74-75 25.80160796413092 32.0 20.0 35.0 2.0 37.0 76-77 25.371172451708333 32.0 18.0 35.0 2.0 37.0 78-79 24.96673809580642 32.0 17.0 35.0 2.0 36.0 80-81 24.52567853191173 31.0 10.5 34.5 2.0 36.0 82-83 23.991042662677106 31.0 7.0 34.0 2.0 35.0 84-85 23.573833835236613 31.0 2.0 34.0 2.0 35.0 86-87 23.072887598048236 30.5 2.0 34.0 2.0 35.0 88-89 22.554553819405676 30.0 2.0 34.0 2.0 35.0 90-91 21.955995543314472 29.5 2.0 34.0 2.0 35.0 92-93 21.403919773500583 29.0 2.0 34.0 2.0 35.0 94-95 20.72047064693549 29.0 2.0 34.0 2.0 35.0 96-97 20.068643659964444 29.0 2.0 34.0 2.0 35.0 98 19.57687559240885 27.0 2.0 33.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 357000.0 3 61735.0 4 44908.0 5 36806.0 6 33921.0 7 35629.0 8 41311.0 9 47691.0 10 50068.0 11 52980.0 12 54419.0 13 52908.0 14 51660.0 15 53786.0 16 57213.0 17 61427.0 18 64025.0 19 64969.0 20 67556.0 21 72313.0 22 78969.0 23 88119.0 24 99000.0 25 114306.0 26 130954.0 27 151129.0 28 174039.0 29 201440.0 30 232880.0 31 272617.0 32 321828.0 33 387809.0 34 475353.0 35 591570.0 36 726073.0 37 722762.0 38 340482.0 39 21960.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.84524764299164 17.191113702472645 12.6865710820729 25.27706757246282 2 16.60117320773721 19.06288328091081 37.96202263456408 26.3739208767879 3 20.012058094728516 22.374581166242884 28.287951002810985 29.325409736217612 4 14.049256739150213 14.818760301652429 34.71801418833387 36.4139687708635 5 15.409465928218207 36.05361886975202 33.219881246115584 15.317033955914189 6 35.22549867432567 33.104958987985654 16.629467054115768 15.040075283572902 7 30.686993525631586 30.572735434519654 19.736332933011518 19.003938106837246 8 27.87197117786689 33.32800947759268 19.259199591916445 19.54081975262399 9 27.351881764149272 15.297095851321782 18.558025681589683 38.79299670293926 10-11 26.67242934976699 24.479737670098867 26.612315417425698 22.23551756270845 12-13 26.898629419277913 21.604201088527127 26.733412189344673 24.76375730285028 14-15 24.344191088858143 23.18525118873776 23.885075374063412 28.58548234834069 16-17 24.737087986827007 26.23818500483076 24.553105597021048 24.47162141132119 18-19 24.77288563336534 25.70991559596842 25.683515503217585 23.833683267448656 20-21 25.347479557396518 24.846318235011942 25.554911404081 24.251290803510543 22-23 25.23779877158046 24.448668621290437 25.373836824933026 24.93969578219607 24-25 24.964372726124644 24.692823359070758 25.38102016170448 24.96178375310012 26-27 24.77391717129061 24.89368604864426 25.409828106770156 24.92256867329498 28-29 24.89837601241508 25.03525942528235 25.328387238242268 24.737977324060303 30-31 25.13116123784061 24.90540525233652 25.093997570761417 24.86943593906145 32-33 24.940856188450024 24.952908672590222 25.033810491052087 25.07242464790766 34-35 25.132340095357762 24.894115568470905 25.2044174935413 24.769126842630033 36-37 25.192119159361543 24.7127535218207 25.232547400392995 24.86257991842476 38-39 25.107307892929853 24.842720814968995 25.18081803951669 24.869153252584464 40-41 25.1687830575821 24.77560363768805 25.185193540945004 24.870419763784845 42-43 24.988384348861164 24.707067375411278 25.088686413724197 25.215861862003365 44-45 24.906407928053447 24.721784035999537 25.213190201224982 25.158617834722037 46-47 25.058160815262436 24.661830803061427 25.17467939818453 25.105328983491603 48-49 24.90616349084789 24.77276118446234 25.113646438862002 25.207428885827767 50-51 24.774437385183607 24.866275054553473 25.305676326394366 25.05361123386855 52-53 24.880530028113988 24.781572799472723 25.261191218791907 25.07670595362138 54-55 24.590415715378786 24.657574991563568 25.444944690361204 25.307064602696443 56-57 24.775196701437892 24.724863627185485 25.374558871080744 25.125380800295883 58-59 24.805016561824157 24.59104006433042 25.430287305114067 25.173656068731358 60-61 24.855900552516058 24.580457375318943 25.493871810249914 25.069770261915085 62-63 24.698307985177056 24.63452598768833 25.484491775729275 25.18267425140534 64-65 24.59821722739161 24.50817555376286 25.5493326170787 25.34427460176683 66-67 24.60952956101422 24.618306912295484 25.406730945826823 25.365432580863473 68-69 24.47849318773689 24.45678996517135 25.53255923628136 25.532157610810398 70-71 24.470868890199533 24.337289818941247 25.633892498306228 25.557948792552992 72-73 24.413086131193452 24.45883065870035 25.5149540597554 25.613129150350794 74-75 24.206530066262218 24.508838513668532 25.717933349945977 25.566698070123273 76-77 24.345223542315797 24.225665518692455 25.685551821613593 25.743559117378155 78-79 24.190561481999033 24.20607167190042 25.81226030715426 25.79110653894629 80-81 24.21707255127949 24.273757701283234 25.76821385810263 25.740955889334654 82-83 24.15682483973536 24.179561245275632 25.85173315875068 25.811880756238324 84-85 24.120316024334695 24.228208094591764 25.81507688236383 25.836398998709708 86-87 24.0267834156806 24.157211301125457 26.030645458240265 25.785359824953673 88-89 23.870018927056055 23.9904315404298 26.036110194643765 26.103439337870384 90-91 23.99407815342885 23.851073139761382 26.112735567641277 26.04211313916849 92-93 24.007248697065535 23.837486657253283 26.12875700407361 26.026507641607573 94-95 23.937537868423863 23.740768751393524 26.206462507095026 26.115230873087587 96-97 23.806715830995824 23.568074051753868 26.357923140995513 26.267286976254788 98 23.808717228558393 23.5131865510381 26.238244973932616 26.439851246470887 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 132.0 1 116.0 2 174.0 3 277.0 4 299.0 5 357.5 6 552.5 7 993.5 8 1425.0 9 1593.5 10 1579.5 11 1623.0 12 1841.5 13 2127.0 14 2348.5 15 2569.5 16 2705.0 17 2705.0 18 2657.5 19 2572.0 20 2499.0 21 2476.0 22 2566.5 23 2670.0 24 2945.0 25 3437.5 26 4090.5 27 5212.5 28 7153.5 29 10180.0 30 14714.5 31 21222.0 32 29582.0 33 39185.5 34 50635.5 35 64391.5 36 79623.0 37 96571.5 38 114626.0 39 132428.0 40 150018.0 41 166938.5 42 186469.0 43 207754.0 44 227440.0 45 247894.0 46 268778.5 47 287877.0 48 303186.0 49 312987.0 50 316367.0 51 319882.0 52 324985.0 53 327188.5 54 324683.0 55 315831.5 56 297905.0 57 272637.5 58 245827.5 59 215276.0 60 182967.0 61 150791.5 62 120015.5 63 91046.0 64 65000.0 65 46740.0 66 34304.0 67 24882.5 68 17670.0 69 12522.0 70 8940.0 71 6430.0 72 4593.0 73 3124.5 74 2217.5 75 1480.0 76 899.0 77 567.5 78 330.5 79 191.5 80 118.0 81 83.0 82 63.5 83 51.0 84 39.5 85 28.5 86 24.0 87 19.0 88 16.0 89 19.5 90 17.0 91 13.5 92 13.0 93 11.0 94 8.0 95 8.5 96 9.0 97 5.5 98 3.5 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.2679093232352087 2 0.13072841552817652 3 0.12851085258365333 4 0.12327494007575134 5 0.11956360209220904 6 0.04552163933340674 7 0.033432841337221256 8 0.01273558718833808 9 0.008608456152697688 10-11 0.0017247711790735977 12-13 0.005320611092588643 14-15 0.010756720255204535 16-17 0.005089614952534143 18-19 0.047854700347957184 20-21 0.09521660893046477 22-23 0.09381523234746747 24-25 0.07015352773455155 26-27 0.08138764001253539 28-29 0.09767286788637762 30-31 0.07315647755526006 32-33 0.018133196994278226 34-35 0.2869126056903589 36-37 0.37155729127766274 38-39 0.34494653594338437 40-41 0.34098110220578215 42-43 0.3182741816384248 44-45 0.30248944540136735 46-47 0.3075251612545554 48-49 0.3016655591685063 50-51 0.3032517326635472 52-53 0.34861167469891574 54-55 0.3339742192907957 56-57 0.3192982645259998 58-59 0.30090327190632643 60-61 0.30872634118283887 62-63 0.308017953020005 64-65 0.32426468153717153 66-67 0.3451775320834389 68-69 0.3067936734777162 70-71 0.2837248589576068 72-73 0.2684252146146638 74-75 0.25595912292305595 76-77 0.2593855656671977 78-79 0.2652990668525929 80-81 0.25578972575368264 82-83 0.2651450694258899 84-85 0.25828448406627125 86-87 0.2536722611365164 88-89 0.276648677200604 90-91 0.26054824623880535 92-93 0.2512160021806036 94-95 0.26553776286398256 96-97 0.2644366812630561 98 0.2637975919422387 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 6493615.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.908382773468766 #Duplication Level Percentage of deduplicated Percentage of total 1 75.32350557705823 38.34597853756389 2 11.779349558209296 11.993352722636178 3 4.727486793943503 7.220061217877833 4 2.461006440892078 5.011434316036237 5 1.3814642219413382 3.5164054699220917 6 0.9231385932455051 2.8197295714742197 7 0.6200445329006664 2.2095825092252634 8 0.434167980315026 1.7682231783888953 9 0.33382831795555157 1.5295193811994008 >10 1.8386630098810652 17.154057475174124 >50 0.13066031026571084 4.524438177392523 >100 0.04641064713335752 3.7499629758759117 >500 1.8268337539196312E-4 0.05345968706573316 >1k 9.1332883339354E-5 0.10379478016767521 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.079948534059996E-5 2 0.0 0.0 0.0 0.0 3.079948534059996E-5 3 0.0 0.0 0.0 0.0 3.079948534059996E-5 4 0.0 0.0 0.0 0.0 4.619922801089994E-5 5 0.0 0.0 0.0 0.0 4.619922801089994E-5 6 0.0 0.0 0.0 0.0 9.239845602179988E-5 7 0.0 0.0 0.0 0.0 9.239845602179988E-5 8 0.0 0.0 0.0 0.0 1.0779819869209986E-4 9 0.0 0.0 0.0 3.079948534059996E-5 1.6939716937329976E-4 10-11 0.0 0.0 0.0 3.079948534059996E-5 1.6939716937329976E-4 12-13 1.539974267029998E-5 0.0 0.0 4.619922801089994E-5 1.7709704070844977E-4 14-15 1.539974267029998E-5 0.0 0.0 4.619922801089994E-5 2.1559639738419968E-4 16-17 1.539974267029998E-5 0.0 0.0 4.619922801089994E-5 2.4639588272479967E-4 18-19 1.539974267029998E-5 0.0 0.0 4.619922801089994E-5 2.6179562539509964E-4 20-21 3.079948534059996E-5 0.0 0.0 8.46985846866499E-5 2.6179562539509964E-4 22-23 3.079948534059996E-5 0.0 0.0 2.1559639738419968E-4 2.848952394005496E-4 24-25 3.079948534059996E-5 0.0 0.0 4.927917654495993E-4 3.079948534059996E-4 26-27 3.079948534059996E-5 0.0 0.0 0.0010548823729155485 3.3109446741144954E-4 28-29 3.079948534059996E-5 0.0 0.0 0.004643022415095444 3.387943387465995E-4 30-31 3.079948534059996E-5 0.0 0.0 0.017809802398201926 3.387943387465995E-4 32-33 3.079948534059996E-5 0.0 0.0 0.04683061746038224 3.618939527520495E-4 34-35 3.849935667574995E-5 7.69987133514999E-6 0.0 0.08593826397160903 4.0039330942779944E-4 36-37 4.619922801089994E-5 1.539974267029998E-5 0.0 0.15131787147836762 4.0039330942779944E-4 38-39 4.619922801089994E-5 1.539974267029998E-5 0.0 0.2557820258823475 4.311927947683994E-4 40-41 4.619922801089994E-5 2.309961400544997E-5 0.0 0.3740751492042568 4.311927947683994E-4 42-43 4.619922801089994E-5 3.079948534059996E-5 1.539974267029998E-5 0.49739628850801904 4.465925374386994E-4 44-45 4.619922801089994E-5 3.079948534059996E-5 1.539974267029998E-5 0.6490221548397926 4.8509189411444936E-4 46-47 4.619922801089994E-5 3.079948534059996E-5 1.539974267029998E-5 0.8290682462696048 5.312911221253493E-4 48-49 4.619922801089994E-5 3.079948534059996E-5 1.539974267029998E-5 1.0221348201271556 6.005899641416992E-4 50-51 5.389909934604993E-5 3.079948534059996E-5 1.539974267029998E-5 1.2287839670199112 6.082898354768492E-4 52-53 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 1.4436103772705957 6.852885488283491E-4 54-55 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 1.6862179232985017 7.62287262179849E-4 56-57 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 1.9698195843147461 7.853868761852989E-4 58-59 6.92988420163499E-5 3.079948534059996E-5 1.539974267029998E-5 2.2747344891866854 8.16186361525899E-4 60-61 7.69987133514999E-5 3.079948534059996E-5 1.539974267029998E-5 2.5982599830756827 8.16186361525899E-4 62-63 7.69987133514999E-5 3.079948534059996E-5 1.539974267029998E-5 2.93361247933547 8.777853322070988E-4 64-65 7.69987133514999E-5 4.619922801089994E-5 2.309961400544997E-5 3.2996566627371657 8.931850748773988E-4 66-67 8.46985846866499E-5 4.619922801089994E-5 3.079948534059996E-5 3.714872224485129 9.085848175476987E-4 68-69 9.239845602179988E-5 4.619922801089994E-5 3.079948534059996E-5 4.1790050688253 9.316844315531488E-4 70-71 9.239845602179988E-5 4.619922801089994E-5 3.079948534059996E-5 4.671966231444273 0.0010317827589100986 72-73 9.239845602179988E-5 4.619922801089994E-5 3.079948534059996E-5 5.179264554489294 0.0012011799282833984 74-75 9.239845602179988E-5 4.619922801089994E-5 3.079948534059996E-5 5.7085537100675054 0.0012011799282833984 76-77 9.239845602179988E-5 4.619922801089994E-5 3.079948534059996E-5 6.29306634286141 0.0012165796709536984 78-79 9.239845602179988E-5 6.159897068119992E-5 3.079948534059996E-5 6.9302845949444185 0.0012319794136239984 80-81 1.0779819869209986E-4 6.159897068119992E-5 3.079948534059996E-5 7.611576910549825 0.0012704787702997483 82-83 1.0779819869209986E-4 6.159897068119992E-5 3.079948534059996E-5 8.310471132027384 0.0013089781269754982 84-85 1.0779819869209986E-4 6.159897068119992E-5 3.079948534059996E-5 9.02864583132816 0.0013089781269754982 86 1.0779819869209986E-4 7.69987133514999E-5 3.079948534059996E-5 9.583152065528985 0.0013089781269754982 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5685 0.0 40.87661 1 GTATCAA 9990 0.0 39.982334 1 TCAACGC 12515 0.0 31.133549 4 TATCAAC 12995 0.0 30.231533 2 CAACGCA 12860 0.0 30.190199 5 ATCAACG 13690 0.0 28.52895 3 AACGCAG 13860 0.0 28.283058 6 GTACATG 21240 0.0 26.53967 1 TACATGG 22465 0.0 24.768976 2 ACGCAGA 16575 0.0 22.841702 7 ACATGGG 23745 0.0 22.7952 3 CGCAGAG 17335 0.0 21.388422 8 CATGGGG 18060 0.0 19.997164 4 GAGTACA 16770 0.0 19.098097 1 AGTACAT 16020 0.0 18.327728 2 GCAGAGT 19450 0.0 17.385704 9 GTATAGG 1240 0.0 16.69955 1 AGAGTAC 15290 0.0 16.534405 10-11 GTATTAA 2045 0.0 15.976403 1 GTATAGA 1695 0.0 15.474588 1 >>END_MODULE