##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921577_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6493615 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.099141079352563 31.0 30.0 34.0 26.0 34.0 2 30.091596129428677 31.0 30.0 34.0 26.0 34.0 3 30.266483923053645 31.0 30.0 34.0 26.0 34.0 4 33.92730520673 35.0 35.0 37.0 30.0 37.0 5 33.45693777656975 35.0 35.0 37.0 28.0 37.0 6 33.34933192066361 35.0 33.0 37.0 28.0 37.0 7 33.15644459981074 35.0 33.0 37.0 27.0 37.0 8 33.061791313467154 35.0 33.0 37.0 26.0 37.0 9 34.37886185121847 37.0 34.0 39.0 27.0 39.0 10-11 34.173098728520245 37.0 33.5 39.0 26.0 39.0 12-13 34.00093183842898 37.0 33.0 39.0 25.0 39.0 14-15 34.877686157864304 38.0 33.5 40.0 25.0 41.0 16-17 34.733815678940005 38.0 33.0 40.0 25.0 41.0 18-19 34.59546716274372 38.0 33.0 40.0 24.5 41.0 20-21 34.45479413239005 38.0 33.0 40.0 24.0 41.0 22-23 34.28651706329987 38.0 33.0 40.0 23.0 41.0 24-25 34.135732253914036 38.0 33.0 40.0 22.5 41.0 26-27 34.050614257235765 38.0 33.0 40.0 22.5 41.0 28-29 34.05732315513008 38.0 33.0 40.0 22.0 41.0 30-31 33.90130381921318 38.0 33.0 40.0 21.0 41.0 32-33 33.73463124931182 38.0 32.5 40.0 19.0 41.0 34-35 33.53398538410423 38.0 32.0 40.0 18.0 41.0 36-37 33.370290662443026 38.0 32.0 40.0 18.0 41.0 38-39 33.193029614475144 38.0 32.0 40.0 16.0 41.0 40-41 33.206667395587814 38.0 32.0 40.0 16.0 41.0 42-43 33.006775424782646 38.0 32.0 40.0 15.0 41.0 44-45 32.80848826116116 37.0 31.0 40.0 14.5 41.0 46-47 32.540195715329595 37.0 31.0 40.0 10.5 41.0 48-49 32.25013963716667 37.0 31.0 40.0 9.0 41.0 50-51 31.980687644709455 37.0 30.0 40.0 8.0 41.0 52-53 31.64865017405559 36.0 30.0 39.5 7.0 41.0 54-55 31.327421551785868 36.0 29.5 39.0 2.0 40.5 56-57 30.977018117027264 35.0 29.0 39.0 2.0 40.0 58-59 30.497203637727214 35.0 28.0 39.0 2.0 40.0 60-61 30.129847704244863 35.0 28.0 38.0 2.0 40.0 62-63 29.78914418240071 34.0 28.0 38.0 2.0 40.0 64-65 29.330497034394554 34.0 27.5 37.5 2.0 40.0 66-67 28.900018248695066 34.0 26.5 37.0 2.0 39.0 68-69 28.466571778585582 34.0 26.0 36.5 2.0 39.0 70-71 28.006279014077677 33.0 26.0 36.0 2.0 39.0 72-73 27.537022906347236 33.0 25.5 35.0 2.0 38.0 74-75 27.01081269831981 32.5 24.5 35.0 2.0 37.0 76-77 25.526757976874208 30.5 22.0 34.0 2.0 35.5 78-79 26.416631722083924 32.0 24.0 35.0 2.0 36.0 80-81 26.487703074481622 32.0 24.0 35.0 2.0 36.0 82-83 26.18716416048688 32.0 24.0 35.0 2.0 35.5 84-85 25.78090023815702 32.0 22.5 35.0 2.0 35.0 86-87 25.353556455071637 32.0 20.0 34.0 2.0 35.0 88-89 24.92355590838077 31.5 19.0 34.0 2.0 35.0 90-91 24.51514980484676 31.0 17.5 34.0 2.0 35.0 92-93 24.119895004554472 31.0 11.0 34.0 2.0 35.0 94-95 23.752524980307577 31.0 4.5 34.0 2.0 35.0 96-97 23.231573861400776 31.0 2.0 34.0 2.0 35.0 98-99 22.483506952598823 31.0 2.0 34.0 2.0 35.0 100-101 19.906918873385628 26.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 162098.0 3 74064.0 4 39152.0 5 28405.0 6 24383.0 7 24257.0 8 27785.0 9 31925.0 10 36301.0 11 41032.0 12 45292.0 13 49155.0 14 53137.0 15 56045.0 16 58506.0 17 60804.0 18 60050.0 19 58538.0 20 60037.0 21 62569.0 22 66760.0 23 75614.0 24 88473.0 25 103920.0 26 123209.0 27 145044.0 28 171177.0 29 201587.0 30 236800.0 31 280004.0 32 333142.0 33 404437.0 34 504397.0 35 642553.0 36 820823.0 37 856550.0 38 369706.0 39 15884.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.85593898400516 18.48845084369899 13.335503391835394 25.32010678046046 2 16.525232863358852 20.105057044496785 36.92616516378011 26.443544928364247 3 19.79833411666727 23.193794147232698 28.581242611970044 28.42662912412999 4 14.577212462027239 15.788613623804293 34.166444369558214 35.46772954461026 5 15.348736058197016 36.311127074328354 33.25508139597924 15.08505547149539 6 35.162748550371745 33.6755586038615 16.348328871100595 14.81336397466617 7 30.573371480685474 30.77037429300664 19.71633445541406 18.939919770893827 8 27.802402239737827 33.72179968708819 19.181981166065356 19.293816907108628 9 27.136121211093446 15.282874446834866 18.525036864828447 39.05596747724324 10-11 26.630914884377567 24.672931246044744 26.637244066122296 22.058909803455393 12-13 26.902605159327926 21.68589724766428 26.806442620359437 24.605054972648357 14-15 24.30431842127031 23.29313628198051 23.87980678464678 28.522738512102404 16-17 24.704747389209476 26.39934750463674 24.55494622769376 24.340958878460025 18-19 24.79024025778078 25.808924679446182 25.642510095376302 23.758324967396735 20-21 25.28503467148547 24.918378002048186 25.550869038631962 24.245718287834382 22-23 25.177398065129474 24.562481809006766 25.45794296306303 24.802177162800728 24-25 24.970096917349135 24.78131239761811 25.399408326198692 24.849182358834064 26-27 24.793021259824506 24.98658583474935 25.450629285166166 24.769763620259987 28-29 24.905927073757287 25.090218441104504 25.380664100449806 24.6231903846884 30-31 25.131960151846794 25.010340376702427 25.127746977875674 24.7299524935751 32-33 24.97736536028939 24.982587849901027 25.06311278559431 24.976934004215273 34-35 25.094513294951042 24.986197673351793 25.29372745398512 24.62556157771205 36-37 25.163845119616468 24.846934747335556 25.219142486425035 24.770077646622944 38-39 25.10070463007518 24.878155004135255 25.218865756404906 24.802274609384657 40-41 25.084884547234793 24.826774835435227 25.2720013807337 24.81633923659628 42-43 24.98766680810524 24.772836276752436 25.16715181714419 25.072345097998138 44-45 24.849709708181813 24.766044178387787 25.275130136325373 25.109115977105034 46-47 25.00197754266351 24.690415407194713 25.271485606300715 25.036121443841065 48-49 24.77259521956783 24.835672740393345 25.22624209663766 25.16548994340117 50-51 24.70497488617899 24.900684100468837 25.38307616255917 25.011264850792998 52-53 24.875094080827807 24.815199611525305 25.235531265790833 25.074175041856055 54-55 24.61561067143558 24.754946147566226 25.328922365273037 25.300520815725157 56-57 24.761820641407642 24.847813864676528 25.220425496655718 25.169939997260105 58-59 24.738181171344813 24.711121823279512 25.304409965294116 25.24628704008156 60-61 24.825796578835746 24.800340685349674 25.297512385389748 25.076350350424832 62-63 24.630032627838187 24.83548427762364 25.24316091048064 25.29132218405754 64-65 24.51726460712606 24.695080746162418 25.343751557046367 25.443903089665156 66-67 24.568163305054117 24.81495574677846 25.172127962878744 25.444752985288684 68-69 24.468984385198095 24.659640347431232 25.241317494191012 25.630057773179665 70-71 24.420474271444622 24.556313581766663 25.287732322307647 25.735479824481068 72-73 24.436375884437073 24.690687294883904 25.124919598380576 25.748017222298447 74-75 24.22237897850488 24.72405728672644 25.25715019081016 25.79641354395852 76-77 24.36315274543492 24.438677058454154 25.359458002533525 25.8387121935774 78-79 24.18130713612745 24.445353013703773 25.461953144281917 25.91138670588686 80-81 24.179188454026043 24.539368650399336 25.383154486961928 25.89828840861269 82-83 24.13656217368403 24.472842810806814 25.43108360773394 25.959511407775217 84-85 24.062665707034007 24.516696722577205 25.343089855427415 26.077547714961373 86-87 23.95846002857512 24.452890579658447 25.51916287625354 26.069486515512896 88-89 23.805580665465513 24.370499538128797 25.4587719667057 26.365147829699985 90-91 23.822166588992218 24.28584289748239 25.516450151071396 26.375540362453993 92-93 23.830521527162716 24.244681377577198 25.511158110309978 26.413638984950104 94-95 23.68532459842442 24.221977874746766 25.567957729940087 26.52473979688873 96-97 23.52884782866824 24.04189011103416 25.751825710082215 26.677436350215384 98-99 23.456308335148023 24.070195145825743 25.68161048514946 26.79188603387678 100-101 23.684503136161524 23.810102062314193 25.72655024696271 26.77884455456157 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 118.0 1 101.0 2 143.0 3 216.5 4 181.5 5 182.0 6 316.0 7 679.0 8 989.5 9 1001.5 10 863.5 11 730.5 12 741.0 13 778.5 14 858.0 15 973.0 16 1064.5 17 1153.0 18 1281.0 19 1404.0 20 1513.5 21 1682.5 22 1918.5 23 2173.5 24 2390.0 25 2738.0 26 3388.0 27 4389.5 28 5758.0 29 8100.0 30 11814.0 31 16891.5 32 24030.0 33 32132.0 34 41375.5 35 53079.5 36 67112.5 37 82133.5 38 98066.0 39 115311.5 40 133182.5 41 150497.5 42 167261.0 43 186211.0 44 207229.0 45 226982.0 46 247340.5 47 267502.0 48 286115.0 49 301643.0 50 310344.0 51 317477.5 52 322943.0 53 325470.5 54 324303.5 55 316022.5 56 298836.0 57 273016.0 58 246105.0 59 216703.0 60 183521.0 61 151753.0 62 121573.5 63 92018.5 64 65670.0 65 46849.5 66 34202.5 67 24785.5 68 17534.5 69 12457.0 70 8832.5 71 6213.5 72 4361.0 73 3134.0 74 2270.0 75 1468.5 76 883.5 77 528.0 78 305.5 79 144.0 80 86.0 81 51.0 82 25.5 83 12.5 84 7.0 85 8.5 86 8.0 87 4.5 88 1.0 89 1.5 90 3.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.2237120617714478 2 0.0 3 4.619922801089994E-5 4 0.012365993364250882 5 0.01402916557264328 6 0.10705901104392544 7 0.13761210050180062 8 0.15398202696032948 9 0.10903017810572385 10-11 0.1198792968169502 12-13 0.09488551446305332 14-15 0.1184471207486123 16-17 0.0720707956970039 18-19 0.0770141130941702 20-21 0.05364500359198998 22-23 0.07962436947678604 24-25 0.07292548141520555 26-27 0.05042645737389728 28-29 0.018148596736948526 30-31 0.03190826681286156 32-33 0.03785256748359735 34-35 0.04406636365106339 36-37 0.036150895918529206 38-39 0.038168262208338494 40-41 0.02178293600713932 42-43 0.03059158881455091 44-45 0.016885817837983926 46-47 0.030375992417166712 48-49 2.771953680653996E-4 50-51 0.016547023499237326 52-53 0.008131064129918389 54-55 0.01557683971100843 56-57 0.010186929776403435 58-59 0.00739187648174399 60-61 0.030714786755913312 62-63 0.013035882170408934 64-65 0.014683654636131029 66-67 0.057725935399619475 68-69 0.0764443226153691 70-71 0.03267055407504141 72-73 0.054522788924197076 74-75 0.04622232762490539 76-77 0.19897237517161087 78-79 0.07361846983536904 80-81 0.01588483456441443 82-83 0.010394826302452486 84-85 0.023831101782289216 86-87 0.16481574592888554 88-89 0.3738903522922132 90-91 0.2751780017755903 92-93 0.27495470550687096 94-95 0.0020019665471389973 96-97 0.005975100156076392 98-99 0.004881718426485093 100-101 0.005035715853188094 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6493615.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.86975371512534 #Duplication Level Percentage of deduplicated Percentage of total 1 72.76772711372394 34.83373175343413 2 12.853966172229958 12.306323898544012 3 5.314595737700537 7.632251671775387 4 2.6453321746525194 5.065255987812522 5 1.591733441505243 3.809794391249243 6 1.0155627626689911 2.916884359873014 7 0.6833603651626029 2.2898604665308344 8 0.5036957579905553 1.9289433505889009 9 0.3627256481365124 1.5627228698208655 >10 2.0544616480157143 18.16267227671983 >50 0.15083251810918163 4.956936123933735 >100 0.05542573744585056 4.247245476665302 >500 3.872945284963713E-4 0.10375985228451073 >1k 1.93628129776347E-4 0.18361752076777954 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.079948534059996E-5 2 0.0 0.0 0.0 0.0 4.619922801089994E-5 3 0.0 0.0 0.0 0.0 4.619922801089994E-5 4 0.0 0.0 0.0 1.539974267029998E-5 9.239845602179988E-5 5 0.0 0.0 0.0 1.539974267029998E-5 9.239845602179988E-5 6 0.0 0.0 0.0 1.539974267029998E-5 1.539974267029998E-4 7 0.0 0.0 0.0 1.539974267029998E-5 1.539974267029998E-4 8 0.0 0.0 0.0 1.539974267029998E-5 1.8479691204359975E-4 9 0.0 0.0 0.0 4.619922801089994E-5 2.0019665471389972E-4 10-11 0.0 0.0 0.0 8.46985846866499E-5 2.0019665471389972E-4 12-13 0.0 0.0 0.0 1.0779819869209986E-4 2.078965260490497E-4 14-15 7.69987133514999E-6 0.0 0.0 1.0779819869209986E-4 2.6179562539509964E-4 16-17 1.539974267029998E-5 0.0 0.0 1.0779819869209986E-4 3.4649421008174956E-4 18-19 1.539974267029998E-5 0.0 0.0 1.1549807002724985E-4 3.695938240871995E-4 20-21 1.539974267029998E-5 0.0 0.0 1.4629755536784978E-4 3.9269343809264945E-4 22-23 1.539974267029998E-5 0.0 0.0 2.6179562539509964E-4 4.8509189411444936E-4 24-25 1.539974267029998E-5 0.0 0.0 5.235912507901993E-4 6.005899641416992E-4 26-27 1.539974267029998E-5 0.0 0.0 0.0011395809576021986 6.159897068119992E-4 28-29 1.539974267029998E-5 0.0 0.0 0.004650722286430594 6.159897068119992E-4 30-31 3.079948534059996E-5 0.0 0.0 0.018009999052915827 6.236895781471492E-4 32-33 3.849935667574995E-5 0.0 0.0 0.04697691501575009 6.621889348228991E-4 34-35 4.619922801089994E-5 0.0 0.0 0.08630785779569623 6.77588677493199E-4 36-37 4.619922801089994E-5 0.0 0.0 0.15203395951253654 6.852885488283491E-4 38-39 4.619922801089994E-5 0.0 0.0 0.2576453947454538 7.23787905504099E-4 40-41 4.619922801089994E-5 0.0 0.0 0.3763466112481261 7.39187648174399E-4 42-43 4.619922801089994E-5 0.0 7.69987133514999E-6 0.5004839369134142 7.39187648174399E-4 44-45 4.619922801089994E-5 0.0 1.539974267029998E-5 0.6534264812434984 7.39187648174399E-4 46-47 4.619922801089994E-5 0.0 1.539974267029998E-5 0.833903765468079 7.62287262179849E-4 48-49 4.619922801089994E-5 0.0 1.539974267029998E-5 1.025284067503232 8.007866188555989E-4 50-51 4.619922801089994E-5 0.0 1.539974267029998E-5 1.2283835737104833 8.007866188555989E-4 52-53 4.619922801089994E-5 0.0 1.539974267029998E-5 1.4404765296371898 8.392859755313488E-4 54-55 4.619922801089994E-5 0.0 1.539974267029998E-5 1.6791263417988285 8.777853322070988E-4 56-57 4.619922801089994E-5 0.0 1.539974267029998E-5 1.9583313762827022 8.777853322070988E-4 58-59 4.619922801089994E-5 0.0 1.539974267029998E-5 2.257956469547394 8.931850748773988E-4 60-61 4.619922801089994E-5 7.69987133514999E-6 1.539974267029998E-5 2.5766387443665817 9.393843028882988E-4 62-63 4.619922801089994E-5 1.539974267029998E-5 1.539974267029998E-5 2.9079103088187397 9.701837882288987E-4 64-65 4.619922801089994E-5 1.539974267029998E-5 1.539974267029998E-5 3.267440401070898 9.778836595640487E-4 66-67 4.619922801089994E-5 1.539974267029998E-5 1.539974267029998E-5 3.675479682734501 9.932834022343487E-4 68-69 4.619922801089994E-5 1.539974267029998E-5 1.539974267029998E-5 4.131920355610857 0.0010086831449046486 70-71 5.389909934604993E-5 3.079948534059996E-5 1.539974267029998E-5 4.616958350625961 0.0010471825015803985 72-73 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 5.1186280677249885 0.0011934800569482484 74-75 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 5.645322366663253 0.0012011799282833984 76-77 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 6.228402823388821 0.0012088797996185484 78-79 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 6.863187916129922 0.0012165796709536984 80-81 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 7.5409228911784885 0.0012473791562942983 82-83 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 8.238885428224494 0.0013320777409809481 84-85 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 8.955966745795678 0.0013397776123160981 86-87 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 9.707104594282228 0.0013397776123160981 88-89 6.159897068119992E-5 3.079948534059996E-5 1.539974267029998E-5 10.526032110003442 0.001362877226321548 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10270 0.0 41.418526 1 GGTATCA 6020 0.0 40.78315 1 TCAACGC 13315 0.0 31.066076 4 TATCAAC 13805 0.0 30.03151 2 CAACGCA 13825 0.0 29.816542 5 ATCAACG 14540 0.0 28.64472 3 AACGCAG 14830 0.0 27.760271 6 GTACATG 21500 0.0 24.586864 1 TACATGG 22850 0.0 23.069391 2 ACGCAGA 18225 0.0 22.06793 7 CGCAGAG 19005 0.0 20.936714 8 ACATGGG 24335 0.0 20.86199 3 CATGGGG 18270 0.0 18.741577 4 GAGTACA 17420 0.0 18.35476 1 GCAGAGT 20685 0.0 18.177816 9 AGAGTAC 16710 0.0 17.444517 10-11 AGTACAT 16825 0.0 17.387012 2 GTATATA 1385 0.0 16.489939 1 GTGGTAT 3835 0.0 15.756724 1 TATACTG 2255 0.0 15.584321 5 >>END_MODULE