##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921576_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5834182 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.07062446800597 31.0 30.0 34.0 26.0 34.0 2 30.05604710309003 31.0 30.0 34.0 26.0 34.0 3 30.2266315997684 31.0 30.0 34.0 26.0 34.0 4 33.89449283549948 35.0 35.0 37.0 30.0 37.0 5 33.417547995588755 35.0 35.0 37.0 28.0 37.0 6 33.31238226712845 35.0 33.0 37.0 28.0 37.0 7 33.12850404735403 35.0 33.0 37.0 27.0 37.0 8 33.02635793672532 35.0 33.0 37.0 26.0 37.0 9 34.32445028283314 37.0 34.0 39.0 27.0 39.0 10-11 34.11140336383061 37.0 33.5 39.0 26.0 39.0 12-13 33.91349421392751 37.0 33.0 39.0 25.0 39.0 14-15 34.74753315889014 38.0 33.0 40.0 25.0 41.0 16-17 34.593429464490484 38.0 33.0 40.0 25.0 41.0 18-19 34.47572804550835 38.0 33.0 40.0 24.0 41.0 20-21 34.34772475387295 38.0 33.0 40.0 23.0 41.0 22-23 34.20172296647585 38.0 33.0 40.0 22.5 41.0 24-25 34.03924963259631 38.0 33.0 40.0 22.0 41.0 26-27 33.950068407190585 38.0 33.0 40.0 21.5 41.0 28-29 33.94761287872062 38.0 33.0 40.0 21.0 41.0 30-31 33.774758826515864 38.0 32.5 40.0 19.0 41.0 32-33 33.5847530982064 38.0 32.0 40.0 18.5 41.0 34-35 33.38999820368991 38.0 32.0 40.0 18.0 41.0 36-37 33.23644737171381 38.0 32.0 40.0 16.5 41.0 38-39 33.06650255339994 37.5 32.0 40.0 16.0 41.0 40-41 33.07991668754934 38.0 32.0 40.0 15.5 41.0 42-43 32.881329293463935 37.5 31.5 40.0 15.0 41.0 44-45 32.68557494435381 37.0 31.0 40.0 12.5 41.0 46-47 32.41567335403661 37.0 31.0 40.0 9.0 41.0 48-49 32.14516516625638 37.0 31.0 40.0 8.0 41.0 50-51 31.892943946554976 36.5 30.0 40.0 7.5 41.0 52-53 31.586769661968034 36.0 30.0 39.5 4.0 41.0 54-55 31.28037041011062 36.0 30.0 39.0 2.0 41.0 56-57 30.966573634487233 35.0 29.0 39.0 2.0 40.0 58-59 30.50692873482521 35.0 28.0 39.0 2.0 40.0 60-61 30.14594419577586 35.0 28.0 38.5 2.0 40.0 62-63 29.790349015508944 34.5 28.0 38.0 2.0 40.0 64-65 29.36824399718761 34.0 27.5 38.0 2.0 40.0 66-67 28.977578347744377 34.0 26.5 37.0 2.0 39.5 68-69 28.561255802441543 34.0 26.0 36.5 2.0 39.0 70-71 28.109437792650283 33.5 26.0 36.0 2.0 39.0 72-73 27.635541623487235 33.0 26.0 35.5 2.0 38.5 74-75 27.11150012118237 32.5 25.0 35.0 2.0 37.5 76-77 25.621222221041442 30.5 22.5 34.0 2.0 36.0 78-79 26.518191581956135 32.0 24.5 35.0 2.0 36.0 80-81 26.58849329691806 33.0 25.0 35.0 2.0 36.0 82-83 26.275494662319414 32.0 24.0 35.0 2.0 36.0 84-85 25.86870644419389 32.0 23.0 35.0 2.0 35.0 86-87 25.4469068671495 32.0 20.0 34.5 2.0 35.0 88-89 25.03531566207568 32.0 19.0 34.0 2.0 35.0 90-91 24.62402732722428 31.0 17.5 34.0 2.0 35.0 92-93 24.21632552772608 31.0 13.0 34.0 2.0 35.0 94-95 23.845694563522358 31.0 4.5 34.0 2.0 35.0 96-97 23.342721910286652 31.0 2.0 34.0 2.0 35.0 98-99 22.635352308172763 31.0 2.0 34.0 2.0 35.0 100-101 20.068106205805712 27.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 151143.0 3 69317.0 4 37615.0 5 26031.0 6 22288.0 7 22171.0 8 24538.0 9 28387.0 10 31946.0 11 35653.0 12 39469.0 13 43341.0 14 46959.0 15 50213.0 16 53513.0 17 55799.0 18 54398.0 19 51869.0 20 52804.0 21 54906.0 22 59513.0 23 67459.0 24 78250.0 25 92431.0 26 109226.0 27 129667.0 28 152332.0 29 179622.0 30 210755.0 31 250222.0 32 299328.0 33 365680.0 34 457682.0 35 559972.0 36 715380.0 37 776435.0 38 358779.0 39 19089.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.91718002403646 18.695375969996338 13.812479857952612 24.574964148014587 2 16.078552228915726 20.761042422056768 38.432277224124995 24.728128124902515 3 19.427072674162496 25.238174083821235 29.19508112368186 26.139672118334406 4 14.717819560446568 16.00616168843703 35.047328637897266 34.22869011321914 5 14.80877800770089 38.312232540095735 32.35603343601302 14.52295601619035 6 33.6423559247728 33.65381794097233 17.86887144611008 14.83495468814479 7 29.480525387582762 32.53855230919085 20.251245456924998 17.72967684630139 8 28.281323844195903 34.17174418606647 19.7681894160651 17.778742553672526 9 29.501160902990513 15.07828609502297 18.46876457992402 36.95178842206249 10-11 27.02776772440711 25.073658458482782 26.569059448970034 21.329514368140075 12-13 26.986613737423788 22.046191733197087 27.085435731219277 23.88175879815985 14-15 24.856768951922486 23.555007826955134 24.531901406106225 27.056321815016155 16-17 24.81947310512263 26.308945953810742 25.141860172521252 23.72972076854538 18-19 24.797817149099153 26.299920886835928 26.340686809303655 22.561575154761268 20-21 25.267126191400653 25.227895890756773 26.29835574019474 23.206622177647834 22-23 25.30049024308365 24.593189499648087 25.967513483443085 24.13880677382518 24-25 24.799672446621845 24.66870941550436 25.80838796344253 24.723230174431265 26-27 24.303717627480633 25.17109201352239 26.120859120537233 24.404331238459744 28-29 24.32895769284639 26.26937489960359 25.436031137329945 23.965636270220074 30-31 25.764500320589512 25.212026731824196 25.46322590977079 23.5602470378155 32-33 25.290577543873848 25.22461201742025 25.318913398426634 24.165897040279265 34-35 25.128565022459977 25.69440717072924 25.778913947305014 23.39811385950577 36-37 24.930680285697875 25.77203326111726 25.83173797825287 23.465548474931992 38-39 25.179119473539767 25.705411663357157 25.359385651220357 23.75608321188272 40-41 25.24782587675551 25.281711100055098 25.34540126173382 24.125061761455573 42-43 24.64227984844789 25.44710571740993 25.123726546094243 24.786887888047936 44-45 24.08736293289846 25.460191877870187 25.897572275640684 24.55487291359067 46-47 24.175469584690184 24.950470994905906 25.67607627749685 25.19798314290706 48-49 24.053851403426936 25.415982799939425 25.866175719560918 24.66399007707272 50-51 24.466366944245628 25.136730854123186 26.02970080616474 24.36720139546645 52-53 24.461620544466946 25.15619837367017 25.76600134991804 24.616179731944847 54-55 23.393214791007477 24.846453441796655 26.567844632671996 25.192487134523876 56-57 24.067954144229294 24.894003249992736 25.73733170950835 25.300710896269624 58-59 24.260051298058933 25.25226059605924 25.94403701633375 24.543651089548078 60-61 25.10089213725017 25.049489120366303 25.971074229608433 23.8785445127751 62-63 24.704638097080526 24.86273643930648 26.02753851123904 24.405086952373956 64-65 24.049748097499045 24.531361576367853 26.254457483261856 25.164432842871243 66-67 24.262536651818 24.880265511244893 25.7612897632511 25.095908073686008 68-69 23.703831718629925 24.982829481831157 25.99500665550554 25.318332144033374 70-71 23.787672630995345 24.701684261080487 26.02193185540657 25.488711252517593 72-73 23.58217525104169 25.507794331719403 25.445334033967974 25.46469638327093 74-75 23.4473032526553 25.12649081677956 25.770704409588625 25.655501520976507 76-77 23.199673609422252 24.461319865514167 26.006024588868783 26.3329819361948 78-79 23.107246612481465 24.601091920411612 26.36681523899406 25.92484622811286 80-81 23.562633014137973 24.95338156878446 25.631527062518973 25.852458354558593 82-83 23.485943626398512 24.984473612168916 25.905814522962338 25.623768238470234 84-85 23.378635097304397 25.147266665369383 25.42553394854854 26.04856428877768 86-87 22.73915559476563 25.466435423742244 25.685545620358536 26.10886336113359 88-89 22.670862221647184 24.801842956424462 26.083633292344715 26.443661529583633 90-91 23.355279469263937 24.19775258574157 26.161552332686817 26.285415612307677 92-93 23.544278385316762 24.21589141850613 25.818080690160617 26.42174950601649 94-95 23.10112056024241 24.544972734188246 25.698923182984846 26.654983522584498 96-97 22.302075402760604 24.370853014866817 26.16251429270797 27.164557289664604 98-99 21.952361493026785 24.15951506832315 26.170033257374918 27.718090181275144 100-101 22.36700317567899 24.41062070198507 26.063862747724688 27.15851337461125 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 174.0 1 177.5 2 242.0 3 334.5 4 315.0 5 300.0 6 492.0 7 957.5 8 1389.0 9 1528.5 10 1363.0 11 1164.0 12 1190.0 13 1305.5 14 1480.5 15 1695.5 16 1920.5 17 2089.0 18 2256.0 19 2507.5 20 2763.0 21 2936.5 22 3127.5 23 3458.5 24 3989.5 25 4755.5 26 5982.0 27 7947.0 28 10807.0 29 15235.0 30 21490.5 31 28801.0 32 37745.0 33 47057.5 34 56225.5 35 66259.5 36 78809.5 37 92008.0 38 102487.5 39 112654.5 40 123270.5 41 132860.5 42 143268.0 43 158393.5 44 175878.0 45 193743.0 46 213911.0 47 234963.5 48 256246.5 49 275555.5 50 290734.5 51 299034.0 52 300571.0 53 298829.0 54 290922.0 55 274945.5 56 254149.5 57 230305.0 58 201554.5 59 168331.0 60 137471.0 61 111578.0 62 88838.0 63 67950.0 64 49400.0 65 35931.5 66 26546.5 67 19720.0 68 14524.5 69 10503.5 70 7624.0 71 5562.5 72 4012.0 73 3118.5 74 2370.5 75 1621.0 76 1107.5 77 681.0 78 371.5 79 197.0 80 100.0 81 59.5 82 36.5 83 22.0 84 12.5 85 8.0 86 5.0 87 2.5 88 1.5 89 0.5 90 0.0 91 0.5 92 2.0 93 2.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.22327037449294518 2 0.0 3 6.856145385934138E-5 4 0.012272500240822107 5 0.014243642039278172 6 0.10690444693017805 7 0.1372428902629366 8 0.15417756936619392 9 0.10954406290376269 10-11 0.11910838571714082 12-13 0.0946148063258911 14-15 0.1179942620919265 16-17 0.07256372872838043 18-19 0.0781257766727195 20-21 0.05536337399141817 22-23 0.07927418102486347 24-25 0.07357501017280571 26-27 0.05078689694630712 28-29 0.01808308345540129 30-31 0.033552261482415184 32-33 0.04024557341543339 34-35 0.046227560264660926 36-37 0.036800360359001485 38-39 0.038574387977611944 40-41 0.021528296511833193 42-43 0.0319582076801855 44-45 0.017903109639020517 46-47 0.029841372792278335 48-49 2.8281599716978317E-4 50-51 0.01726034600908919 52-53 0.008475909733361079 54-55 0.016026239839621047 56-57 0.010806999164578685 58-59 0.007421777380273704 60-61 0.031529698593564616 62-63 0.013498036228557834 64-65 0.014972107486533673 66-67 0.059451350677781394 68-69 0.07579468724150189 70-71 0.0339464898421064 72-73 0.056186111437730266 74-75 0.046810332622465325 76-77 0.2007136561732219 78-79 0.07475769525187935 80-81 0.015777704569380935 82-83 0.00968430535763197 84-85 0.02537630810968873 86-87 0.16652720124260778 88-89 0.3770708558629128 90-91 0.27550563215203094 92-93 0.2772282386802469 94-95 0.002331089431217607 96-97 0.006007697394424788 98-99 0.004936424677872579 100-101 0.005339223219296209 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5834182.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.040751356267194 #Duplication Level Percentage of deduplicated Percentage of total 1 75.59496108321912 37.07233690268844 2 12.343679930300953 12.10686676566469 3 4.503292886423956 6.6253460018269195 4 2.181667501697373 4.27962453971158 5 1.2807186900164496 3.1403703417210465 6 0.7923072915553107 2.3313206929752894 7 0.5395946479795762 1.8523488875317247 8 0.39384624465466306 1.5451612605367127 9 0.29671500655256766 1.3096014174015895 >10 1.8490472794624822 17.20744365477833 >50 0.15389141837232817 5.127366163370247 >100 0.06704261932952008 5.569053652450448 >500 0.0021100519655848646 0.6802492751192593 >1k 0.0010550141906343286 0.9375567760701266 >5k 7.033427936580167E-5 0.2153536681536291 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 7375 0.12641018055316067 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7140363464835345E-5 2 0.0 0.0 0.0 0.0 1.7140363464835345E-5 3 0.0 0.0 0.0 0.0 1.7140363464835345E-5 4 0.0 0.0 0.0 0.0 1.7140363464835345E-5 5 0.0 0.0 0.0 1.7140363464835345E-5 1.7140363464835345E-5 6 0.0 0.0 0.0 1.7140363464835345E-5 1.7140363464835345E-5 7 0.0 0.0 0.0 1.7140363464835345E-5 1.7140363464835345E-5 8 0.0 0.0 0.0 1.7140363464835345E-5 3.428072692967069E-5 9 0.0 0.0 0.0 3.428072692967069E-5 5.1421090394506036E-5 10-11 0.0 0.0 0.0 3.428072692967069E-5 5.1421090394506036E-5 12-13 0.0 0.0 0.0 3.428072692967069E-5 5.1421090394506036E-5 14-15 0.0 0.0 0.0 3.428072692967069E-5 7.713163559175905E-5 16-17 0.0 0.0 0.0 3.428072692967069E-5 1.0284218078901207E-4 18-19 0.0 0.0 0.0 5.999127212692371E-5 1.0284218078901207E-4 20-21 0.0 0.0 0.0 7.713163559175905E-5 1.0284218078901207E-4 22-23 0.0 0.0 0.0 2.0568436157802415E-4 1.1141236252142974E-4 24-25 0.0 0.0 0.0 8.655883549741848E-4 1.1998254425384741E-4 26-27 0.0 0.0 0.0 0.0017054661647511167 1.542632711835181E-4 28-29 0.0 0.0 0.0 0.005921995577100611 1.542632711835181E-4 30-31 0.0 0.0 0.0 0.022856674680357934 1.542632711835181E-4 32-33 0.0 0.0 0.0 0.05963132449416217 1.9711417984560648E-4 34-35 0.0 0.0 0.0 0.10757292110530663 2.571054519725302E-4 36-37 0.0 8.570181732417673E-6 0.0 0.18456743378934698 2.571054519725302E-4 38-39 0.0 1.7140363464835345E-5 0.0 0.317919461545766 2.742458154373655E-4 40-41 0.0 1.7140363464835345E-5 0.0 0.4774276839495237 2.9138617890220087E-4 42-43 0.0 1.7140363464835345E-5 0.0 0.633276438753539 2.9138617890220087E-4 44-45 0.0 1.7140363464835345E-5 0.0 0.8136187729488041 3.085265423670362E-4 46-47 0.0 2.5710545197253018E-5 0.0 1.0131497440429524 3.170967240994539E-4 48-49 0.0 3.428072692967069E-5 0.0 1.2316722378561382 3.428072692967069E-4 50-51 8.570181732417673E-6 3.428072692967069E-5 0.0 1.4740198368854451 3.599476327615422E-4 52-53 1.7140363464835345E-5 3.428072692967069E-5 0.0 1.729805480871183 4.027985414236306E-4 54-55 1.7140363464835345E-5 3.428072692967069E-5 0.0 2.019366211064379 4.2850908662088363E-4 56-57 1.7140363464835345E-5 3.428072692967069E-5 0.0 2.32659865598982 4.370792683533013E-4 58-59 1.7140363464835345E-5 3.428072692967069E-5 0.0 2.6707257332733194 4.542196318181366E-4 60-61 1.7140363464835345E-5 3.428072692967069E-5 0.0 3.048456493129628 4.71359995282972E-4 62-63 2.5710545197253018E-5 3.428072692967069E-5 0.0 3.457399854855402 4.97070540480225E-4 64-65 3.428072692967069E-5 3.428072692967069E-5 0.0 3.8713396325311757 4.97070540480225E-4 66-67 3.428072692967069E-5 3.428072692967069E-5 0.0 4.3366576496927935 4.97070540480225E-4 68-69 3.428072692967069E-5 3.428072692967069E-5 0.0 4.851399904905263 4.97070540480225E-4 70-71 3.428072692967069E-5 3.428072692967069E-5 0.0 5.421856911560181 5.142109039450604E-4 72-73 3.428072692967069E-5 3.428072692967069E-5 0.0 5.996461886173588 6.256232664664901E-4 74-75 3.428072692967069E-5 3.428072692967069E-5 0.0 6.5828422904873385 6.427636299313254E-4 76-77 3.428072692967069E-5 5.1421090394506036E-5 0.0 7.2259830084148895 6.513338116637431E-4 78-79 3.428072692967069E-5 5.1421090394506036E-5 0.0 7.936159687853412 6.599039933961608E-4 80-81 3.428072692967069E-5 5.999127212692371E-5 0.0 8.662328326404626 6.770443568609962E-4 82-83 3.428072692967069E-5 6.856145385934138E-5 0.0 9.423403315151978 7.370356289879198E-4 84-85 3.428072692967069E-5 6.856145385934138E-5 0.0 10.20656366222377 7.370356289879198E-4 86-87 3.428072692967069E-5 6.856145385934138E-5 0.0 11.01318059669719 7.370356289879198E-4 88-89 3.428072692967069E-5 6.856145385934138E-5 0.0 11.884939482518714 7.541759924527551E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7000 0.0 47.720684 1 GTATCAA 12705 0.0 44.4199 1 TCAACGC 17660 0.0 31.491543 4 TATCAAC 17770 0.0 31.429157 2 CAACGCA 18230 0.0 30.454527 5 ATCAACG 18380 0.0 30.335442 3 GTACATG 32680 0.0 29.747734 1 AACGCAG 19165 0.0 29.113932 6 TACATGG 33905 0.0 28.378443 2 ACATGGG 35320 0.0 26.798738 3 CATGGGG 28810 0.0 25.963608 4 ATGGGGG 20750 0.0 25.199575 5 ATATGTA 4065 0.0 24.699574 1 TGGGGGG 18350 0.0 24.687899 6 GTAAGTA 6700 0.0 23.532936 2 ACGCAGA 23360 0.0 23.418089 7 CGCAGAG 23845 0.0 22.72232 8 TATGTAA 4545 0.0 22.152096 2 TGTAAGT 6975 0.0 22.10387 1 GAGTACA 24885 0.0 20.517744 1 >>END_MODULE