##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921574_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6986714 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.805432281899616 31.0 28.0 31.0 16.0 34.0 2 27.775836537748646 31.0 28.0 33.0 16.0 34.0 3 27.867035347375033 31.0 28.0 33.0 16.0 34.0 4 31.24432458520558 35.0 32.0 37.0 16.0 37.0 5 31.162083777867537 35.0 32.0 37.0 16.0 37.0 6 31.24924950413027 35.0 32.0 37.0 17.0 37.0 7 31.03923332198799 35.0 32.0 37.0 15.0 37.0 8 30.98042069562315 35.0 32.0 37.0 11.0 37.0 9 32.18679997492384 37.0 32.0 39.0 11.0 39.0 10-11 31.950206348792868 37.0 31.5 39.0 10.0 39.0 12-13 31.739196137125408 37.0 31.0 39.0 10.0 39.0 14-15 32.41518895721222 37.5 31.0 40.0 10.0 41.0 16-17 32.2535934632504 37.0 31.0 40.0 9.0 41.0 18-19 32.05692146551297 37.0 31.0 40.0 8.0 41.0 20-21 31.915059568775824 37.0 30.0 40.0 4.5 41.0 22-23 31.678785406129407 37.0 30.0 40.0 2.0 41.0 24-25 31.783913009749647 37.0 30.0 40.0 2.0 41.0 26-27 31.528723660364513 37.0 30.0 40.0 2.0 41.0 28-29 31.32150550315928 37.0 30.0 40.0 2.0 41.0 30-31 31.065681449104687 37.0 29.5 40.0 2.0 41.0 32-33 30.820252410503706 36.0 29.0 40.0 2.0 41.0 34-35 30.467403989915717 36.0 28.5 39.5 2.0 41.0 36-37 30.167003544155378 36.0 27.0 39.0 2.0 40.5 38-39 29.93751798055567 35.5 27.0 39.0 2.0 40.0 40-41 29.693502696689748 35.0 26.5 39.0 2.0 40.0 42-43 29.433813449355448 35.0 26.0 39.0 2.0 40.0 44-45 29.1652736178982 35.0 25.0 39.0 2.0 40.0 46-47 28.86320801166328 35.0 24.0 39.0 2.0 40.0 48-49 28.560637447017296 34.5 24.0 39.0 2.0 40.0 50-51 27.662343198819933 33.5 23.5 37.5 2.0 39.5 52-53 27.873816289030866 33.5 23.5 38.0 2.0 39.5 54-55 28.42660991991371 34.0 24.0 38.5 2.0 40.0 56-57 28.389559598403483 34.0 24.0 39.0 2.0 40.0 58-59 28.124870432652603 34.0 23.0 38.5 2.0 40.0 60-61 27.761201188427066 34.0 23.0 38.0 2.0 40.0 62-63 27.325255978704725 34.0 22.0 38.0 2.0 40.0 64-65 26.841598353675277 33.0 20.5 37.0 2.0 40.0 66-67 26.475361593447218 33.0 19.5 36.5 2.0 39.0 68-69 26.009215276308723 32.5 18.0 36.0 2.0 39.0 70-71 25.568603566712476 32.0 14.5 35.5 2.0 39.0 72-73 25.078582506740652 32.0 10.0 35.0 2.0 38.0 74-75 24.620876995966917 31.0 7.5 35.0 2.0 37.0 76-77 24.178843945809145 31.0 4.5 35.0 2.0 36.5 78-79 23.77507251620719 31.0 2.0 34.5 2.0 36.0 80-81 23.325540948148156 31.0 2.0 34.0 2.0 35.5 82-83 22.778657821115907 30.0 2.0 34.0 2.0 35.0 84-85 22.352543556241173 30.0 2.0 34.0 2.0 35.0 86-87 21.84633112218419 29.5 2.0 34.0 2.0 35.0 88-89 21.32799374641641 29.0 2.0 34.0 2.0 35.0 90-91 20.723899675870516 29.0 2.0 34.0 2.0 35.0 92-93 20.164708116004178 28.0 2.0 34.0 2.0 35.0 94-95 19.480918282900944 27.0 2.0 33.5 2.0 35.0 96-97 18.830357518570246 25.5 2.0 33.0 2.0 35.0 98 18.345121182862215 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 491220.0 3 81408.0 4 58644.0 5 47136.0 6 43511.0 7 45408.0 8 51013.0 9 58602.0 10 61668.0 11 64375.0 12 64416.0 13 62843.0 14 61079.0 15 63230.0 16 67818.0 17 71591.0 18 74528.0 19 76358.0 20 79268.0 21 84021.0 22 90747.0 23 99825.0 24 112171.0 25 127435.0 26 145318.0 27 166721.0 28 189594.0 29 216694.0 30 251248.0 31 290851.0 32 339930.0 33 405084.0 34 493632.0 35 602054.0 36 721291.0 37 695765.0 38 311045.0 39 19172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.36589356332446 16.66709961027899 12.651129014086932 25.315877812309616 2 16.522862912247106 18.407052554048413 38.608531166509515 26.461553367194973 3 20.668880589346198 21.680681759387756 27.60064373927155 30.04979391199449 4 14.055977468909687 14.295840369999668 34.33074854078744 37.317433620303206 5 15.623595589348033 35.92559833626062 32.97239501887069 15.478411055520652 6 36.11622906216274 32.501855421331356 16.31545040809246 15.066465108413455 7 31.628834574548964 30.20602547262553 18.885735140705943 19.27940481211956 8 28.193774709187057 33.90795449372595 18.523147510608005 19.375123286478985 9 27.52625614454117 15.742407149990717 18.09458495960323 38.636751745864885 10-11 27.087169106114985 24.341371855912755 26.132597084427424 22.43886195354484 12-13 27.2445768141966 21.297692741782246 26.502197686980526 24.955532757040633 14-15 24.421411349707018 22.91606203361544 23.513565335403953 29.14896128127359 16-17 24.964841960227652 26.123071246041007 24.24106227163377 24.67102452209757 18-19 24.98572498973452 25.6360497081812 25.511116966301667 23.867108335782607 20-21 25.543034964446885 24.62407007373223 25.36906406780732 24.463830894013565 22-23 25.37138204829358 24.353638328857965 25.12111144530825 25.1538681775402 24-25 24.979629123285303 24.72335497203364 25.181468739853052 25.115547164828 26-27 24.990862766160657 24.75101351136 25.301023778437965 24.95709994404138 28-29 25.085467624167674 25.05699990658806 25.025566503281738 24.831965965962524 30-31 25.376353788997807 24.845799203258583 24.856434358354594 24.921412649389016 32-33 25.020322798404067 24.841041251648175 24.998849382814665 25.139786567133093 34-35 25.213158063776426 24.822687960164227 25.19361482157192 24.770539154487427 36-37 25.201350106319293 24.89088283155694 25.06835222121194 24.83941484091183 38-39 25.366561944257647 24.816747753045085 24.989328597892662 24.827361704804602 40-41 25.302195026443165 24.735688638570018 25.003405616175243 24.958710718811574 42-43 25.133115944427338 24.62367665717998 25.050652802099155 25.192554596293526 44-45 25.058404845845306 24.721747434224607 25.110433522777154 25.109414197152937 46-47 25.2836068163984 24.649319068696716 24.987112451995188 25.0799616629097 48-49 24.99407076889063 24.71767241069903 25.087445391494352 25.200811428915987 50-51 25.017133026437943 24.74113104319188 25.105491850120636 25.136244080249536 52-53 24.97554339903018 24.846707274702315 25.166600046277594 25.011149279989915 54-55 24.68743876320139 24.503838768629898 25.476418254129136 25.33230421403958 56-57 24.850373969051645 24.64547840160637 25.262333311005108 25.241814318336882 58-59 24.945535332943315 24.71650019201711 25.321127983892094 25.01683649114747 60-61 25.19685220252069 24.38535867280345 25.35955866169074 25.058230462985126 62-63 24.884239833557476 24.49103358527229 25.504063360950756 25.120663220219473 64-65 24.78462118817736 24.37729155229697 25.552388584948105 25.285698674577567 66-67 24.783746957477284 24.695424571504653 25.306823164637265 25.2140053063808 68-69 24.691981147482437 24.50296064639254 25.3177638424621 25.487294363662926 70-71 24.7536781413519 24.31223515071272 25.464868722600002 25.46921798533538 72-73 24.7245787782015 24.50190962301746 25.40627792110106 25.367233677679973 74-75 24.531599533511663 24.452990480383395 25.58103326276504 25.434376723339902 76-77 24.55452823525174 24.16645487722503 25.63199237012691 25.64702451739632 78-79 24.534521833824243 24.141080161354857 25.69759655430342 25.626801450517476 80-81 24.663811492494585 24.31019848219917 25.49431847126446 25.53167155404179 82-83 24.524983479823355 24.356269224954183 25.585855442337103 25.53289185288536 84-85 24.646480533334213 24.344807144358292 25.512783413445444 25.495928908862048 86-87 24.440477878270073 24.38028103531108 25.633803160484923 25.545437925933918 88-89 24.441095739409953 24.103887298261974 25.692609259037052 25.762407703291018 90-91 24.587716086969063 23.910952960377664 25.764743481101675 25.736587471551598 92-93 24.54923918069642 24.10401540830833 25.77360276109768 25.573142649897562 94-95 24.55330464578668 23.897566399749252 25.86432906789775 25.684799886566317 96-97 24.322293241531572 23.947217431313 25.90095403913113 25.829535288024296 98 24.520800839943952 23.794274007029767 25.84701906578623 25.837906087240047 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 83.0 1 74.5 2 124.0 3 201.5 4 232.0 5 279.5 6 412.0 7 729.0 8 1060.5 9 1262.5 10 1364.5 11 1515.5 12 1762.0 13 2009.0 14 2294.0 15 2480.0 16 2569.0 17 2611.5 18 2517.0 19 2450.0 20 2315.5 21 2104.0 22 2115.0 23 2333.5 24 2583.5 25 3059.0 26 3823.0 27 4782.5 28 6382.0 29 8741.0 30 12354.5 31 17814.5 32 25263.5 33 34336.5 34 46102.0 35 60470.5 36 76519.0 37 94997.5 38 114339.5 39 133317.0 40 151591.0 41 172318.5 42 198749.0 43 227983.5 44 254212.0 45 277144.5 46 300395.0 47 323688.5 48 338331.5 49 344744.5 50 347992.0 51 348497.0 52 351720.0 53 356767.0 54 355619.5 55 342004.5 56 317888.0 57 294112.0 58 269276.0 59 237845.0 60 201480.0 61 163789.5 62 129449.0 63 97358.5 64 71072.5 65 52063.5 66 37692.0 67 27101.5 68 19289.0 69 13753.5 70 9730.5 71 6718.5 72 4713.5 73 3293.5 74 2310.5 75 1541.0 76 982.0 77 599.5 78 355.5 79 210.0 80 136.0 81 90.0 82 58.5 83 41.0 84 36.5 85 30.5 86 25.0 87 24.5 88 20.0 89 18.5 90 16.0 91 16.0 92 15.5 93 9.5 94 8.5 95 8.5 96 7.5 97 9.5 98 6.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.27064225041986834 2 0.13592942261555288 3 0.13389699363677976 4 0.12850103782693836 5 0.12449343138992092 6 0.04472775041314128 7 0.034808924481523076 8 0.01362586188585936 9 0.009088678883950308 10-11 0.0018248922168561644 12-13 0.00560349257175834 14-15 0.01041262029617929 16-17 0.0057680906932787 18-19 0.04804118216374679 20-21 0.09337007354244069 22-23 0.09259717801530161 24-25 0.07060543769216832 26-27 0.08104668374861201 28-29 0.09844398954930744 30-31 0.07373280200105514 32-33 0.019071912776163446 34-35 0.2878534887788451 36-37 0.37323697520751525 38-39 0.346085441596722 40-41 0.3428006356063809 42-43 0.32047254260014074 44-45 0.30521501237921 46-47 0.3099812014632343 48-49 0.3037765679259234 50-51 0.30580184046463044 52-53 0.3489623305032953 54-55 0.33604495618398006 56-57 0.3211023093259578 58-59 0.30327561712129625 60-61 0.31083281783110056 62-63 0.3101171738244903 64-65 0.3266342374970551 66-67 0.34569899383315245 68-69 0.30910811577516983 70-71 0.2864866087262195 72-73 0.27162268270892437 74-75 0.25836179926643627 76-77 0.26214039962133845 78-79 0.26790849031461716 80-81 0.258762559910138 82-83 0.2679299596348155 84-85 0.26121721885281124 86-87 0.2563436831677953 88-89 0.27924429137932366 90-91 0.26331405579217926 92-93 0.25400352726617975 94-95 0.268595508560963 96-97 0.2670210917464204 98 0.26664895686298307 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 6986714.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.81264555578385 #Duplication Level Percentage of deduplicated Percentage of total 1 76.56980726454641 39.67284284072626 2 11.31686991961613 11.727139398919652 3 4.473802081902272 6.953985646689907 4 2.298709374426791 4.764088562117317 5 1.303652923359918 3.377285342290443 6 0.8799979037916837 2.735701168739477 7 0.599996399697878 2.1761180554604795 8 0.42302723079147225 1.753452797555466 9 0.30882727170435736 1.4401042170099858 >10 1.6643702879838222 15.496145947197085 >50 0.10857931448571582 3.865153939092795 >100 0.04912913639677001 4.5046740044644284 >500 0.0023953723890575364 0.8179190485467422 >1k 8.355189077445326E-4 0.7153890311901543 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.2938640396615634E-5 2 0.0 0.0 0.0 0.0 4.2938640396615634E-5 3 0.0 0.0 0.0 0.0 4.2938640396615634E-5 4 0.0 0.0 0.0 0.0 5.725152052882084E-5 5 1.431288013220521E-5 1.431288013220521E-5 0.0 0.0 5.725152052882084E-5 6 1.431288013220521E-5 1.431288013220521E-5 0.0 1.431288013220521E-5 7.156440066102605E-5 7 1.431288013220521E-5 1.431288013220521E-5 0.0 1.431288013220521E-5 7.156440066102605E-5 8 1.431288013220521E-5 1.431288013220521E-5 0.0 1.431288013220521E-5 8.587728079323127E-5 9 1.431288013220521E-5 1.431288013220521E-5 0.0 1.431288013220521E-5 1.1450304105764169E-4 10-11 1.0019016092543648E-4 1.431288013220521E-5 0.0 2.862576026441042E-5 1.1450304105764169E-4 12-13 1.1450304105764169E-4 1.431288013220521E-5 0.0 4.2938640396615634E-5 1.1450304105764169E-4 14-15 1.2165948112374429E-4 1.431288013220521E-5 0.0 7.156440066102605E-5 1.7891100165256515E-4 16-17 1.288159211898469E-4 1.431288013220521E-5 0.0 9.303372085933388E-5 2.36162522181386E-4 18-19 1.288159211898469E-4 1.431288013220521E-5 0.0 1.1450304105764169E-4 2.576318423796938E-4 20-21 1.288159211898469E-4 1.431288013220521E-5 0.0 1.6459812152035992E-4 2.647882824457964E-4 22-23 1.5028524138815472E-4 1.431288013220521E-5 0.0 2.433189622474886E-4 3.792913235034381E-4 24-25 2.504754023135912E-4 2.1469320198307817E-5 0.0 4.8663792449497715E-4 4.794814844288746E-4 26-27 3.0057048277630944E-4 4.2938640396615634E-5 0.0 9.661194089238517E-4 5.009508046271824E-4 28-29 3.0057048277630944E-4 4.2938640396615634E-5 0.0 0.003284805990341096 5.009508046271824E-4 30-31 3.0772692284241205E-4 4.2938640396615634E-5 0.0 0.012910217879249102 5.009508046271824E-4 32-33 3.578220033051303E-4 4.2938640396615634E-5 0.0 0.033950151673590764 5.152636847593876E-4 34-35 3.7929132350343815E-4 4.2938640396615634E-5 0.0 0.06211074333370452 5.582023251560032E-4 36-37 4.0076064370174594E-4 5.0095080462718235E-5 0.0 0.1101232997371869 5.79671645354311E-4 38-39 4.0076064370174594E-4 5.725152052882084E-5 0.0 0.18666142624415427 6.011409655526189E-4 40-41 4.4369928409836157E-4 5.725152052882084E-5 0.0 0.27323288172379745 6.154538456848241E-4 42-43 4.4369928409836157E-4 5.725152052882084E-5 0.0 0.3625738795090224 6.226102857509267E-4 44-45 4.72325044362772E-4 6.440796059492345E-5 0.0 0.4689615175317038 6.369231658831318E-4 46-47 5.009508046271824E-4 7.156440066102605E-5 0.0 0.5967898499924285 6.727053662136449E-4 48-49 5.009508046271824E-4 7.156440066102605E-5 0.0 0.7370489188479734 7.585826470068762E-4 50-51 5.009508046271824E-4 7.156440066102605E-5 0.0 0.8913847053135422 7.728955271390814E-4 52-53 5.009508046271824E-4 7.156440066102605E-5 0.0 1.0490625492899808 8.587728079323127E-4 54-55 5.08107244693285E-4 7.156440066102605E-5 0.0 1.224194950587644 9.518065287916466E-4 56-57 5.152636847593876E-4 7.156440066102605E-5 0.0 1.427516569305685 9.661194089238518E-4 58-59 5.152636847593876E-4 7.156440066102605E-5 0.0 1.653345192031619 9.732758489899544E-4 60-61 5.295765648915928E-4 7.156440066102605E-5 0.0 1.8986965832578806 9.875887291221595E-4 62-63 5.295765648915928E-4 7.872084072712865E-5 0.0 2.1501166356601975 0.0010305273695187752 64-65 5.438894450237981E-4 8.587728079323127E-5 0.0 2.4187264571012923 0.0010376838095848778 66-67 5.438894450237981E-4 8.587728079323127E-5 0.0 2.7254801040947143 0.0010448402496509804 68-69 5.868280854204136E-4 8.587728079323127E-5 0.0 3.070198665638811 0.0010448402496509804 70-71 6.082974056187215E-4 8.587728079323127E-5 0.0 3.4472714927217574 0.0011092482102459038 72-73 6.154538456848241E-4 8.587728079323127E-5 0.0 3.833962575253546 0.0012022819311052378 74-75 6.154538456848241E-4 8.587728079323127E-5 0.0 4.229470391946772 0.0012022819311052378 76-77 6.154538456848241E-4 8.587728079323127E-5 0.0 4.665784229896916 0.0012237512513035456 78-79 6.297667258170293E-4 1.0019016092543648E-4 0.0 5.150697452335962 0.0012452205715018534 80-81 6.297667258170293E-4 1.0019016092543648E-4 0.0 5.672158614192595 0.0012953156519645717 82-83 6.297667258170293E-4 1.0019016092543648E-4 0.0 6.207725119419516 0.0013883493728239055 84-85 6.297667258170293E-4 1.0019016092543648E-4 0.0 6.749396068022822 0.0014026622529561108 86 6.297667258170293E-4 1.0019016092543648E-4 0.0 7.169951424947407 0.0014026622529561108 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 10800 0.0 34.641308 1 GGTATCA 7195 0.0 30.444134 1 TCAACGC 13235 0.0 27.393925 4 TATCAAC 13360 0.0 27.207582 2 CAACGCA 13425 0.0 27.00526 5 GTACATG 23575 0.0 26.371275 1 ATCAACG 14025 0.0 26.015263 3 AACGCAG 14385 0.0 25.367958 6 TACATGG 24380 0.0 24.842861 2 ACATGGG 26450 0.0 22.429062 3 ACGCAGA 17395 0.0 20.524885 7 GAGTACA 18015 0.0 20.17996 1 AGTACAT 16885 0.0 20.00351 2 CGCAGAG 18140 0.0 19.22451 8 CATGGGG 21755 0.0 19.0946 4 GTATATA 1235 0.0 19.003374 1 TACACTG 7100 0.0 16.69733 5 ACCGCTC 3150 0.0 16.606316 8 ATTCACG 1975 0.0 16.49379 9 ATGGGGG 11590 0.0 15.898151 5 >>END_MODULE