##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921574_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6986714 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.04105892984885 31.0 30.0 34.0 26.0 34.0 2 30.026580879079923 31.0 30.0 34.0 26.0 34.0 3 30.20836862651026 31.0 30.0 34.0 26.0 34.0 4 33.85983453738052 35.0 35.0 37.0 30.0 37.0 5 33.37348845251144 35.0 33.0 37.0 28.0 37.0 6 33.26414477535505 35.0 33.0 37.0 27.0 37.0 7 33.07511084610018 35.0 33.0 37.0 26.0 37.0 8 32.97322002875744 35.0 33.0 37.0 26.0 37.0 9 34.29321709747959 37.0 34.0 39.0 27.0 39.0 10-11 34.079705853137824 37.0 33.5 39.0 26.0 39.0 12-13 33.89311942638557 37.0 33.0 39.0 25.0 39.0 14-15 34.76265444671129 38.0 33.0 40.0 25.0 41.0 16-17 34.61033477254114 38.0 33.0 40.0 25.0 41.0 18-19 34.466290805663434 38.0 33.0 40.0 24.0 41.0 20-21 34.318504593146365 38.0 33.0 40.0 23.0 41.0 22-23 34.144999852577335 38.0 33.0 40.0 22.0 41.0 24-25 33.98659834938141 38.0 33.0 40.0 21.5 41.0 26-27 33.896085913921766 38.0 32.5 40.0 20.0 41.0 28-29 33.908802263839625 38.0 33.0 40.0 20.0 41.0 30-31 33.757068845239694 38.0 32.5 40.0 19.0 41.0 32-33 33.58806142630141 38.0 32.0 40.0 18.0 41.0 34-35 33.38360522557528 38.0 32.0 40.0 17.5 41.0 36-37 33.21643357664276 38.0 32.0 40.0 16.0 41.0 38-39 33.03520209929876 38.0 31.5 40.0 15.5 41.0 40-41 33.04935596333269 38.0 32.0 40.0 15.5 41.0 42-43 32.844150411767245 37.5 31.0 40.0 14.5 41.0 44-45 32.64060250641432 37.0 31.0 40.0 11.0 41.0 46-47 32.37122465582533 37.0 31.0 40.0 9.0 41.0 48-49 32.07882697073331 37.0 30.5 40.0 8.0 41.0 50-51 31.79709846431384 36.5 30.0 40.0 7.0 41.0 52-53 31.459909909007294 36.0 30.0 39.0 4.0 41.0 54-55 31.13040429306252 36.0 29.0 39.0 2.0 40.5 56-57 30.76890724309024 35.0 29.0 39.0 2.0 40.0 58-59 30.275669578001903 35.0 28.0 39.0 2.0 40.0 60-61 29.898115838146516 34.5 28.0 38.0 2.0 40.0 62-63 29.544924695643758 34.0 27.5 38.0 2.0 40.0 64-65 29.07350179211572 34.0 26.5 37.5 2.0 40.0 66-67 28.631633769465875 34.0 26.0 37.0 2.0 39.0 68-69 28.18513646043047 33.5 26.0 36.0 2.0 39.0 70-71 27.70503973684911 33.0 25.5 36.0 2.0 39.0 72-73 27.214157685572932 33.0 25.0 35.0 2.0 38.0 74-75 26.669692791203417 32.0 23.5 35.0 2.0 37.0 76-77 25.211550666021253 30.5 21.0 34.0 2.0 35.5 78-79 26.081682104062082 32.0 23.0 34.5 2.0 36.0 80-81 26.132101872210598 32.0 23.0 35.0 2.0 36.0 82-83 25.80632812506709 32.0 22.0 35.0 2.0 35.5 84-85 25.37645408127483 32.0 20.0 34.5 2.0 35.0 86-87 24.923639496335472 31.5 18.5 34.0 2.0 35.0 88-89 24.47424218309208 31.0 16.5 34.0 2.0 35.0 90-91 24.036336466613633 31.0 9.0 34.0 2.0 35.0 92-93 23.61421384931457 31.0 4.5 34.0 2.0 35.0 94-95 23.21647443991553 31.0 2.0 34.0 2.0 35.0 96-97 22.657169522038544 30.5 2.0 34.0 2.0 35.0 98-99 21.873412594246737 30.0 2.0 34.0 2.0 35.0 100-101 19.296409299135476 25.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 184672.0 3 83470.0 4 44692.0 5 31716.0 6 27579.0 7 26959.0 8 31062.0 9 35347.0 10 40404.0 11 45157.0 12 50214.0 13 54832.0 14 58732.0 15 62501.0 16 65654.0 17 67756.0 18 68281.0 19 67272.0 20 68110.0 21 70798.0 22 75927.0 23 85530.0 24 98104.0 25 114345.0 26 136367.0 27 159827.0 28 188809.0 29 220158.0 30 258506.0 31 303937.0 32 361189.0 33 436526.0 34 540606.0 35 682383.0 36 863165.0 37 888236.0 38 372610.0 39 15281.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.31547357760315 17.92308972339614 13.31578917168031 25.445647527320403 2 16.48782245845472 19.52843640086026 37.35978029156482 26.623960849120206 3 20.553459195112094 22.37599030845983 27.90502886049976 29.165521635928314 4 14.698297685762476 15.168963860195541 33.72948690659094 36.403251547451035 5 15.592076501402435 36.20171601937787 32.9630866017474 15.243120877472299 6 36.12358686049267 33.0422399437882 16.012424136570363 14.82174905914876 7 31.55902364523208 30.326784514448335 18.844910003187554 19.269281837132027 8 28.166967221809696 34.33268157305497 18.345795142761304 19.15455606237403 9 27.26554994272139 15.72892852818688 18.02985938620542 38.975662142886314 10-11 27.07522942668728 24.559571407260687 26.100453501124115 22.26474566492791 12-13 27.237871979402183 21.352639868610424 26.578502950792803 24.830985201194586 14-15 24.35889820948258 23.025197271596596 23.47743541658263 29.1384691023382 16-17 24.987717957906757 26.280003632333383 24.227627848538575 24.50465056122129 18-19 24.983907188523528 25.727807604745077 25.50703457111189 23.7812506356195 20-21 25.486819696687085 24.682128624981697 25.31609206718695 24.514959611144267 22-23 25.313308104721422 24.46608597600393 25.146646857350436 25.073959061924217 24-25 24.981326130483474 24.79376385142776 25.177353419613414 25.047556598475353 26-27 25.002590116544866 24.838827447259177 25.268854813353016 24.889727622842944 28-29 25.047117239487708 25.15111837727304 25.046716409225077 24.755047974014175 30-31 25.322629347032876 24.890082600729638 24.898536959291512 24.888751092945974 32-33 25.002382189029476 24.85103891004203 25.043117442456087 25.103461458472413 34-35 25.17075134889234 24.904287745752857 25.241186862022712 24.68377404333209 36-37 25.139379565939418 24.997259908375344 25.093032464233307 24.77032806145193 38-39 25.30343579134139 24.894428012669355 25.039321475632427 24.762814720356833 40-41 25.223542003076933 24.796103079815012 25.079781083127294 24.90057383398076 42-43 25.071943620254512 24.71726515168435 25.147194499469975 25.063596728591154 44-45 24.97020302312984 24.77805797290658 25.185259464888382 25.0664795390752 46-47 25.104392338233755 24.761643579087345 25.085558336869628 25.048405745809273 48-49 24.838464233696996 24.82498145043832 25.196266099187483 25.140288216677202 50-51 24.92576517732256 24.849501181215135 25.134616152678586 25.09011748878372 52-53 24.925842761605107 24.914448820233233 25.12595243544781 25.033755982713846 54-55 24.677370244869508 24.61256586548489 25.336486755184456 25.373577134461144 56-57 24.837807828024122 24.740191208048437 25.159014389200806 25.262986574726636 58-59 24.888079260324005 24.851958018915592 25.20365165925825 25.056311061502157 60-61 25.124667816758194 24.624299975023845 25.185937786677275 25.065094421540685 62-63 24.85863878392637 24.68987565824347 25.26129690872677 25.19018864910339 64-65 24.734306978623096 24.556766745057306 25.312570657326876 25.396355618992715 66-67 24.707734746655234 24.879724141012545 25.087609402554715 25.32493170977751 68-69 24.710048533057783 24.662644184347986 25.058028967430296 25.569278315163935 70-71 24.706447723408807 24.4803180648089 25.18962555382545 25.623608657956844 72-73 24.724098228248355 24.64743259266897 25.02786799791491 25.600601181167765 74-75 24.502871149697793 24.637638304945217 25.168330069342478 25.691160476014517 76-77 24.47219718262795 24.298960876158805 25.376096458755608 25.852745482457628 78-79 24.461994972038113 24.264925736832467 25.412119775869463 25.860959515259957 80-81 24.54690667307788 24.449958268167233 25.18104729901171 25.822087759743173 82-83 24.360582422723766 24.518504835116907 25.240088230425155 25.880824511734176 84-85 24.50025783445968 24.44546264320836 25.16610351573964 25.888176006592317 86-87 24.240490967123055 24.52964682670476 25.24503840859763 25.984823797574553 88-89 24.216851380684094 24.317038947728122 25.27539728245804 26.190712389129743 90-91 24.266401860379936 24.137268609647872 25.28630696699542 26.31002256297677 92-93 24.250847915937378 24.30736129249214 25.284981708324384 26.156809083246106 94-95 24.167749577797057 24.120394431086275 25.328433741941144 26.383422249175524 96-97 23.90100126089795 24.16910489414197 25.39567132259449 26.534222522365585 98-99 23.970143545381703 24.01891714171124 25.412718379036185 26.598220933870877 100-101 24.239812228560602 23.66852094493761 25.422208054945877 26.669458771555917 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 56.0 2 65.5 3 106.5 4 103.5 5 109.5 6 210.0 7 434.5 8 654.0 9 709.5 10 643.0 11 585.0 12 569.0 13 601.5 14 663.5 15 718.5 16 818.0 17 924.5 18 1060.5 19 1177.0 20 1238.5 21 1356.5 22 1544.5 23 1774.0 24 2077.0 25 2485.0 26 3004.5 27 3736.5 28 4920.0 29 6679.5 30 9353.5 31 13434.5 32 19308.5 33 27149.0 34 36707.5 35 48762.5 36 63441.5 37 79342.5 38 97439.0 39 115858.0 40 133299.5 41 151211.0 42 172020.0 43 199307.0 44 227639.5 45 254675.0 46 275508.5 47 295280.5 48 319909.5 49 334744.5 50 340500.5 51 345153.5 52 349855.0 53 354355.0 54 355290.5 55 343829.0 56 321504.0 57 297167.0 58 272309.0 59 243875.5 60 205418.0 61 165496.5 62 130778.5 63 98230.5 64 71332.0 65 51492.0 66 37278.5 67 26994.5 68 19081.5 69 13358.0 70 9567.0 71 6704.5 72 4571.5 73 3236.5 74 2329.0 75 1510.5 76 913.0 77 505.5 78 270.0 79 153.0 80 86.5 81 57.5 82 30.0 83 12.5 84 4.0 85 2.5 86 3.0 87 3.0 88 2.5 89 1.0 90 0.0 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.22519885600011677 2 0.0 3 2.8625760264410425E-5 4 0.012466518595150737 5 0.014484634693791673 6 0.10585806145778974 7 0.1370887659062615 8 0.15363445533909073 9 0.10976547773388176 10-11 0.11938373318272366 12-13 0.09383524214673736 14-15 0.11737277352414884 16-17 0.07122089153785313 18-19 0.076373528385447 20-21 0.052406610604069384 22-23 0.07853477328540999 24-25 0.07203672570538883 26-27 0.04920052545445542 28-29 0.017368680040431024 30-31 0.030787005164373406 32-33 0.0370918288626098 34-35 0.04323921087939194 36-37 0.03518821580502651 38-39 0.037456807305981034 40-41 0.021548041039034946 42-43 0.029742164914722428 44-45 0.015830045426218964 46-47 0.028711637545203655 48-49 3.721348834373355E-4 50-51 0.01590160982687999 52-53 0.00780051967205184 54-55 0.015386346142120602 56-57 0.010176457773997906 58-59 0.007442697668746711 60-61 0.029377186471351197 62-63 0.01269552467726602 64-65 0.013933588808701772 66-67 0.057480526610936125 68-69 0.07567219725896895 70-71 0.0318533147342227 72-73 0.054303067221586565 74-75 0.04562230542140411 76-77 0.19849817811348797 78-79 0.07381867928184838 80-81 0.014878238897427317 82-83 0.009854417971023289 84-85 0.0230723627731148 86-87 0.16578609057133295 88-89 0.3759922046329648 90-91 0.2734475749257806 92-93 0.2767681631164522 94-95 0.0020753676191697557 96-97 0.006054348295922805 98-99 0.005038133806536235 100-101 0.004980882286007414 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6986714.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.59232901720326 #Duplication Level Percentage of deduplicated Percentage of total 1 72.06983044099334 33.579012521208135 2 13.128185015412141 12.233454312736006 3 5.484477009071573 7.666036718818489 4 2.773751445311175 5.169421598075254 5 1.6347948253805082 3.8084449189875005 6 1.070478805082862 2.9925660415417985 7 0.7095700554628204 2.3142365039415225 8 0.5104606684378752 1.9026841131359191 9 0.3812489967436754 1.5986950824383985 >10 2.0288457970834366 17.101875762479782 >50 0.13833348131957965 4.404476908806788 >100 0.06569132376821117 5.399457671295851 >500 0.0031563517728422376 0.9524687501593696 >1k 0.0011757841598711027 0.8771690963752077 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.431288013220521E-5 2 0.0 0.0 0.0 0.0 1.431288013220521E-5 3 0.0 0.0 0.0 0.0 1.431288013220521E-5 4 0.0 0.0 0.0 0.0 1.431288013220521E-5 5 2.862576026441042E-5 0.0 0.0 0.0 1.431288013220521E-5 6 2.862576026441042E-5 0.0 0.0 0.0 2.862576026441042E-5 7 2.862576026441042E-5 0.0 0.0 0.0 2.862576026441042E-5 8 2.862576026441042E-5 0.0 0.0 0.0 2.862576026441042E-5 9 2.862576026441042E-5 0.0 0.0 0.0 5.725152052882084E-5 10-11 1.0019016092543648E-4 0.0 0.0 5.0095080462718235E-5 5.725152052882084E-5 12-13 1.5028524138815472E-4 0.0 0.0 7.872084072712865E-5 8.587728079323127E-5 14-15 1.6459812152035992E-4 0.0 0.0 9.303372085933388E-5 2.1469320198307817E-4 16-17 1.8606744171866777E-4 0.0 0.0 1.0734660099153909E-4 3.435091231729251E-4 18-19 2.0038032185087297E-4 0.0 0.0 1.2165948112374429E-4 3.578220033051303E-4 20-21 2.0038032185087297E-4 0.0 0.0 1.7891100165256515E-4 3.649784433712329E-4 22-23 2.0038032185087297E-4 0.0 0.0 2.36162522181386E-4 4.3654284403225896E-4 24-25 2.290060821152834E-4 0.0 0.0 4.580121642305668E-4 5.224201248254902E-4 26-27 2.576318423796938E-4 0.0 0.0 9.303372085933386E-4 5.582023251560032E-4 28-29 2.576318423796938E-4 0.0 0.0 0.003249023790010583 5.653587652221058E-4 30-31 2.7910116257800165E-4 0.0 0.0 0.012953156519645716 5.725152052882084E-4 32-33 3.2919624304071984E-4 0.0 0.0 0.03400024675405348 6.082974056187215E-4 34-35 3.578220033051303E-4 0.0 0.0 0.06204633537310959 6.297667258170293E-4 36-37 3.864477635695407E-4 1.431288013220521E-5 0.0 0.11047396530042591 6.369231658831318E-4 38-39 3.864477635695407E-4 1.431288013220521E-5 0.0 0.18850063134114264 6.440796059492345E-4 40-41 4.0076064370174594E-4 1.431288013220521E-5 0.0 0.277383616962137 6.440796059492345E-4 42-43 4.0076064370174594E-4 1.431288013220521E-5 0.0 0.3685924456046147 6.440796059492345E-4 44-45 4.222299639000537E-4 1.431288013220521E-5 0.0 0.4767835065239539 6.440796059492345E-4 46-47 4.72325044362772E-4 1.431288013220521E-5 0.0 0.606379479681006 6.583924860814397E-4 48-49 4.866379244949772E-4 1.431288013220521E-5 0.0 0.7466600178567493 6.941746864119528E-4 50-51 5.009508046271824E-4 1.431288013220521E-5 0.0 0.9000797799938569 7.013311264780554E-4 52-53 5.152636847593876E-4 1.431288013220521E-5 0.0 1.056612593559719 7.228004466763632E-4 54-55 5.367330049576955E-4 1.431288013220521E-5 0.0 1.2299344155206582 7.44269766874671E-4 56-57 5.438894450237981E-4 1.431288013220521E-5 0.0 1.431209292379794 7.44269766874671E-4 58-59 5.438894450237981E-4 1.431288013220521E-5 0.0 1.6535956674339325 7.44269766874671E-4 60-61 5.582023251560032E-4 1.431288013220521E-5 0.0 1.8959127280721666 7.728955271390814E-4 62-63 5.582023251560032E-4 1.431288013220521E-5 0.0 2.1459730568619237 8.730856880645179E-4 64-65 5.582023251560032E-4 2.1469320198307817E-5 0.0 2.412092437160015 8.730856880645179E-4 66-67 5.582023251560032E-4 2.862576026441042E-5 0.0 2.7153036463207165 8.730856880645179E-4 68-69 5.868280854204136E-4 2.862576026441042E-5 0.0 3.0556496229844243 8.730856880645179E-4 70-71 6.011409655526189E-4 2.862576026441042E-5 0.0 3.4292802023955753 9.160243284611335E-4 72-73 6.011409655526189E-4 2.862576026441042E-5 0.0 3.8156707144445874 0.0010591531297831857 74-75 6.011409655526189E-4 2.862576026441042E-5 0.0 4.212674227111629 0.0010591531297831857 76-77 6.154538456848241E-4 2.862576026441042E-5 0.0 4.65000427955116 0.0010663095698492883 78-79 6.440796059492345E-4 2.862576026441042E-5 0.0 5.136906992328582 0.001073466009915391 80-81 6.440796059492345E-4 2.862576026441042E-5 0.0 5.6600785433610135 0.0011020917701798014 82-83 6.512360460153371E-4 2.862576026441042E-5 0.0 6.2000247899083885 0.0011664997307747247 84-85 6.583924860814397E-4 2.862576026441042E-5 0.0 6.745302584305011 0.0011736561708408273 86-87 6.583924860814397E-4 2.862576026441042E-5 0.0 7.321832552470303 0.0011736561708408273 88-89 6.583924860814397E-4 4.2938640396615634E-5 0.0 7.9575176542219985 0.0012022819311052378 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 11160 0.0 33.55695 1 GGTATCA 7590 0.0 32.162334 1 TCAACGC 13985 0.0 26.386562 4 TATCAAC 14270 0.0 25.75825 2 CAACGCA 14285 0.0 25.666552 5 GTACATG 24020 0.0 25.654804 1 ATCAACG 14735 0.0 25.011276 3 TACATGG 24765 0.0 24.334513 2 AACGCAG 15455 0.0 23.658817 6 ACATGGG 26175 0.0 22.226631 3 GTATATA 1350 0.0 20.444016 1 GAGTACA 18715 0.0 20.08673 1 ACGCAGA 18280 0.0 19.63889 7 AGTACAT 17925 0.0 19.631721 2 CATGGGG 21735 0.0 18.638615 4 CGCAGAG 19210 0.0 18.465384 8 GTACCGT 1040 0.0 17.807486 6 ACCGTAT 685 0.0 17.330637 8 ATTCACG 2380 0.0 17.156328 9 ATGGGGG 11105 0.0 16.379879 5 >>END_MODULE