##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921573_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2936580 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.141257517247954 31.0 28.0 31.0 16.0 34.0 2 28.106173507958236 31.0 28.0 33.0 16.0 34.0 3 28.190765788774698 31.0 28.0 34.0 16.0 34.0 4 31.61594099258321 35.0 32.0 37.0 18.0 37.0 5 31.562939201383923 35.0 32.0 37.0 17.0 37.0 6 31.649830755504702 35.0 32.0 37.0 18.0 37.0 7 31.46374251680526 35.0 32.0 37.0 17.0 37.0 8 31.416647256332197 35.0 32.0 37.0 17.0 37.0 9 32.65620619904787 37.0 32.0 39.0 17.0 39.0 10-11 32.42106038316682 37.0 32.0 39.0 16.0 39.0 12-13 32.22952601325351 37.0 32.0 39.0 14.0 39.0 14-15 32.932004236220365 38.0 32.0 40.0 11.0 41.0 16-17 32.7902267263279 38.0 32.0 40.0 10.0 41.0 18-19 32.62142849845739 38.0 31.0 40.0 10.0 41.0 20-21 32.49661698302107 37.5 31.0 40.0 10.0 41.0 22-23 32.270109106511654 37.0 31.0 40.0 9.5 41.0 24-25 32.3650743381757 37.5 31.0 40.0 8.0 41.0 26-27 32.120003711800805 37.0 30.5 40.0 8.0 41.0 28-29 31.92147549189874 37.0 30.0 40.0 2.0 41.0 30-31 31.65784075352962 37.0 30.0 40.0 2.0 41.0 32-33 31.405247600950766 37.0 30.0 40.0 2.0 41.0 34-35 31.061720947496745 36.5 29.5 40.0 2.0 41.0 36-37 30.750666591749585 36.0 29.0 40.0 2.0 41.0 38-39 30.523625271574417 36.0 28.5 39.0 2.0 41.0 40-41 30.285247464737893 36.0 28.0 39.0 2.0 40.0 42-43 30.022135613536836 35.0 27.0 39.0 2.0 40.0 44-45 29.740914771605063 35.0 27.0 39.0 2.0 40.0 46-47 29.43435492988442 35.0 26.0 39.0 2.0 40.0 48-49 29.1261383990901 35.0 26.0 39.0 2.0 40.0 50-51 28.183699405430808 34.0 24.0 38.0 2.0 39.5 52-53 28.374701353274897 33.5 25.0 38.0 2.0 39.5 54-55 28.93956864788291 35.0 26.0 39.0 2.0 40.0 56-57 28.916370063134668 35.0 26.0 39.0 2.0 40.0 58-59 28.663910228905735 34.5 26.0 39.0 2.0 40.0 60-61 28.312607863569184 34.0 25.0 38.0 2.0 40.0 62-63 27.8883636747509 34.0 23.5 38.0 2.0 40.0 64-65 27.417035633287703 34.0 22.5 37.5 2.0 40.0 66-67 27.065129844921643 33.0 22.0 37.0 2.0 39.5 68-69 26.606438441997156 33.0 20.5 36.0 2.0 39.0 70-71 26.178933316987788 33.0 20.0 36.0 2.0 39.0 72-73 25.704730843362007 32.0 18.0 35.0 2.0 38.5 74-75 25.26426897956126 32.0 15.5 35.0 2.0 37.0 76-77 24.84367699841312 32.0 11.0 35.0 2.0 37.0 78-79 24.44612031683114 31.0 7.0 35.0 2.0 36.0 80-81 24.00307108949867 31.0 3.5 34.5 2.0 36.0 82-83 23.466816841359677 31.0 2.0 34.0 2.0 35.0 84-85 23.047071082688024 30.5 2.0 34.0 2.0 35.0 86-87 22.548904507965048 30.0 2.0 34.0 2.0 35.0 88-89 22.035817515613402 30.0 2.0 34.0 2.0 35.0 90-91 21.4378520251449 29.0 2.0 34.0 2.0 35.0 92-93 20.885626987856625 29.0 2.0 34.0 2.0 35.0 94-95 20.206884028359518 29.0 2.0 34.0 2.0 35.0 96-97 19.567322531652465 27.0 2.0 34.0 2.0 35.0 98 19.09442412602415 26.0 2.0 33.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 183581.0 3 30389.0 4 22185.0 5 18026.0 6 16681.0 7 17551.0 8 20233.0 9 22489.0 10 23692.0 11 25367.0 12 25618.0 13 25442.0 14 24955.0 15 26587.0 16 28549.0 17 30340.0 18 31109.0 19 30945.0 20 31267.0 21 33843.0 22 36442.0 23 40281.0 24 44862.0 25 51818.0 26 59384.0 27 67976.0 28 78269.0 29 89844.0 30 103582.0 31 120810.0 32 142969.0 33 171459.0 34 210020.0 35 257461.0 36 313845.0 37 313871.0 38 152818.0 39 12020.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.080985790432784 17.56798107212428 12.413802759950931 24.937230377492 2 16.493125889187617 20.145939302672303 38.43152419886157 24.929410609278516 3 19.637165428653365 24.34168416867262 28.760851158440126 27.260299244233888 4 14.027282166342447 15.844456530449058 35.517929815169374 34.61033148803912 5 14.876712179300958 36.791788904300724 33.32324063049387 15.00825828590445 6 33.15628521940111 34.01425878960415 17.774494987005873 15.054961003988861 7 29.134362545831 31.15165901155948 21.159197727961008 18.554780714648516 8 27.124275163154277 33.15739032170393 20.342227208295956 19.37610730684584 9 27.722351125373894 15.162790887756175 19.164510050529355 37.95034793634057 10-11 26.257957960514556 24.554873532491637 27.225921795319298 21.961246711674512 12-13 26.942037166163075 22.232592036357353 27.126054541135723 23.69931625634385 14-15 24.453984953264392 23.421001232353564 24.649608522975637 27.475405291406407 16-17 24.363117979168678 26.14142066353119 25.203433937969187 24.292027419330946 18-19 24.333617253245205 25.72144049606487 26.494122857824266 23.45081939286566 20-21 25.145226956959238 24.971145494879476 26.15390751014765 23.72972003801364 22-23 25.033486048005503 24.64227151897213 25.976361807140474 24.347880625881892 24-25 24.60205960999397 24.92020063450996 25.944825680154022 24.532914075342052 26-27 24.409028562021902 25.09396018559086 26.06013758617029 24.43687366621695 28-29 24.487628497679918 25.256228362142902 25.889938899259455 24.366204240917725 30-31 24.843197690190536 25.17005944923913 25.60831185154185 24.378431009028485 32-33 24.643009560957534 25.211997399185222 25.63582189800215 24.5091711418551 34-35 24.8143720347175 25.16854930438614 25.758907375590496 24.258171285305863 36-37 24.885770321463657 24.98274738253391 25.773760875730385 24.357721420272053 38-39 24.88526105246752 25.08678051468125 25.648034091514994 24.379924341336235 40-41 24.867045205399158 24.88770551151688 25.693628337669033 24.551620945414925 42-43 24.60868140509938 24.915503817298607 25.627077594685865 24.848737182916146 44-45 24.38621430408924 24.958944300560177 25.81358953046355 24.841251864887035 46-47 24.58732431250044 24.874584275079428 25.67985512640993 24.858236286010204 48-49 24.550147855413258 25.032539806175492 25.53682993621173 24.88048240219952 50-51 24.387605410923243 25.09225804512018 25.71871084029468 24.8014257036619 52-53 24.47020425518243 24.99071163409273 25.72108310378736 24.81800100693748 54-55 24.0786668184038 24.85835304378197 26.005813856129272 25.05716628168495 56-57 24.22651949747985 24.970469235897244 25.825827775422 24.977183491200908 58-59 24.370434734781394 24.858597734318323 25.842114909528686 24.928852621371593 60-61 24.450535042777968 24.796633179194956 25.946666379675122 24.80616539835195 62-63 24.28055025381994 24.758859526203917 25.99793677878862 24.96265344118752 64-65 24.162892139358224 24.62928190294268 26.053926049449583 25.15389990824951 66-67 24.17991548282929 24.731833661677026 25.91443490933749 25.173815946156193 68-69 24.0624008694195 24.68851751642162 25.938495950048697 25.310585664110192 70-71 24.054493009053136 24.48658766307513 26.02613300816507 25.43278631970666 72-73 23.979395293846046 24.66089695734463 25.930428807656398 25.429278941152926 74-75 23.813329540772955 24.68970464980764 26.1666178084271 25.330348000992302 76-77 23.898316891762917 24.363818960945565 26.117459366743716 25.620404780547805 78-79 23.84708863232115 24.40987797750311 26.261601767459062 25.481431622716677 80-81 23.952396789938472 24.514195118253383 26.12661863821656 25.406789453591582 82-83 23.921371563297075 24.382222458993834 26.19914290953833 25.497263068170756 84-85 23.876787022865834 24.428166341924157 26.120925096142223 25.57412153906779 86-87 23.75198387766475 24.342383821938615 26.350368502715284 25.555263797681356 88-89 23.681536221860767 24.163799912054884 26.400116121705793 25.75454774437856 90-91 23.892941031240873 24.00182214082082 26.445594361607878 25.659642466330435 92-93 23.96523419067007 23.960249013037263 26.396686290966382 25.677830505326288 94-95 23.952673185062952 23.858539314849537 26.443011785260033 25.745775714827474 96-97 23.82618061512739 23.63957089154678 26.598826487960263 25.93542200536556 98 23.87904807404339 23.561461676029776 26.38839040725162 26.17109984267521 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 539.0 1 424.5 2 377.5 3 463.5 4 437.5 5 482.0 6 704.5 7 1240.5 8 1724.0 9 1752.5 10 1593.5 11 1468.5 12 1528.5 13 1646.0 14 1701.5 15 1800.5 16 1886.5 17 1925.5 18 1969.5 19 2016.5 20 2060.5 21 2067.5 22 2199.5 23 2415.0 24 2627.5 25 3081.0 26 3791.0 27 4717.0 28 6216.5 29 8655.5 30 11804.5 31 15957.5 32 20948.0 33 25727.5 34 30598.0 35 36415.0 36 43159.5 37 49813.0 38 56229.0 39 62483.5 40 68697.5 41 75461.5 42 83207.5 43 91162.0 44 98587.5 45 107458.0 46 117144.0 47 125377.0 48 131818.5 49 137022.0 50 139503.0 51 139919.5 52 140724.5 53 141957.5 54 141079.0 55 136331.0 56 128125.5 57 117651.0 58 105634.5 59 92302.5 60 79260.0 61 65669.5 62 52457.0 63 40169.5 64 29114.0 65 20853.5 66 14974.0 67 10877.5 68 7895.0 69 5656.0 70 4028.0 71 2876.0 72 2102.5 73 1542.0 74 1119.5 75 737.5 76 455.0 77 279.0 78 150.5 79 83.0 80 56.5 81 41.5 82 27.5 83 15.0 84 9.0 85 7.5 86 9.5 87 8.5 88 8.0 89 7.0 90 6.5 91 3.5 92 5.0 93 7.0 94 6.0 95 8.0 96 6.5 97 4.0 98 3.5 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.28645567292564816 2 0.14057168542999 3 0.13822201336248288 4 0.13263728554985732 5 0.12831252681690947 6 0.047946931464492706 7 0.03633478400043588 8 0.013689393784606582 9 0.009092209304701386 10-11 0.0018729270103317465 12-13 0.00587418016876775 14-15 0.011186482234435977 16-17 0.006282818789203768 18-19 0.050398763187108814 20-21 0.09861812039855887 22-23 0.09860109378937404 24-25 0.07455952162038834 26-27 0.0848435935680281 28-29 0.1043390610846631 30-31 0.07873104087067269 32-33 0.019648706999298503 34-35 0.30477630440852965 36-37 0.39711160601788476 38-39 0.368047184139373 40-41 0.36367134557887065 42-43 0.3394595073180366 44-45 0.32210939255869075 46-47 0.3274046680151741 48-49 0.31996403980140165 50-51 0.3222796586505391 52-53 0.3703968562068801 54-55 0.3564350366753162 56-57 0.3395446403639608 58-59 0.3194702681350414 60-61 0.3291073289336575 62-63 0.32703008261310773 64-65 0.3461509647276764 66-67 0.367229906898501 68-69 0.325872273188539 70-71 0.3018817808471079 72-73 0.28652377936238754 74-75 0.27377084908294685 76-77 0.2768186121270321 78-79 0.2829311648243875 80-81 0.2737197692553923 82-83 0.28267576568661507 84-85 0.27603538810452977 86-87 0.2714722568429942 88-89 0.293453609300615 90-91 0.277755075632198 92-93 0.2689523186836388 94-95 0.28276089873253923 96-97 0.2818244352273733 98 0.2807006790211743 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 2936580.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.158280481908456 #Duplication Level Percentage of deduplicated Percentage of total 1 80.07154429249617 48.97037964460037 2 10.882847088821682 13.311524293997545 3 3.663367048347771 6.721356883531023 4 1.6487659668397998 4.033427657960539 5 0.9267520225649811 2.8339280066602535 6 0.5828889320872009 2.1389090879033477 7 0.3904177403492382 1.6714094368574133 8 0.28724808837839744 1.4054079325550446 9 0.2247463416289737 1.2370589818764832 >10 1.2488922866715795 13.759167049853316 >50 0.05959078656500667 2.416846707814422 >100 0.012547024917439984 1.139801955908865 >500 2.242173324121191E-4 0.0879672688248174 >1k 1.6816299927717486E-4 0.27281509165655865 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3376 0.11496366521599956 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.405321836966812E-5 2 0.0 0.0 0.0 0.0 3.405321836966812E-5 3 0.0 0.0 0.0 0.0 3.405321836966812E-5 4 0.0 0.0 0.0 0.0 3.405321836966812E-5 5 0.0 0.0 0.0 0.0 3.405321836966812E-5 6 0.0 0.0 0.0 0.0 3.405321836966812E-5 7 0.0 0.0 0.0 0.0 6.810643673933624E-5 8 3.405321836966812E-5 0.0 0.0 0.0 6.810643673933624E-5 9 3.405321836966812E-5 0.0 0.0 0.0 6.810643673933624E-5 10-11 3.405321836966812E-5 0.0 0.0 1.702660918483406E-5 6.810643673933624E-5 12-13 3.405321836966812E-5 0.0 0.0 3.405321836966812E-5 6.810643673933624E-5 14-15 5.107982755450218E-5 0.0 0.0 3.405321836966812E-5 2.2134591940284277E-4 16-17 6.810643673933624E-5 0.0 0.0 6.810643673933624E-5 2.3837252858767682E-4 18-19 6.810643673933624E-5 0.0 0.0 1.0215965510900435E-4 3.0647896532701304E-4 20-21 6.810643673933624E-5 3.405321836966812E-5 0.0 1.1918626429383841E-4 3.405321836966812E-4 22-23 6.810643673933624E-5 3.405321836966812E-5 0.0 5.448514939146899E-4 3.916120112511833E-4 24-25 6.810643673933624E-5 3.405321836966812E-5 0.0 0.001753740746037908 4.086386204360174E-4 26-27 6.810643673933624E-5 3.405321836966812E-5 0.0 0.0033712686185971437 4.4269183880568555E-4 28-29 6.810643673933624E-5 3.405321836966812E-5 0.0 0.009926513154758256 4.4269183880568555E-4 30-31 6.810643673933624E-5 3.405321836966812E-5 0.0 0.03161841325623685 4.4269183880568555E-4 32-33 6.810643673933624E-5 3.405321836966812E-5 0.0 0.07895238679007553 4.4269183880568555E-4 34-35 6.810643673933624E-5 3.405321836966812E-5 0.0 0.14879553766626485 4.4269183880568555E-4 36-37 6.810643673933624E-5 3.405321836966812E-5 0.0 0.2555694038643592 4.7674505717535363E-4 38-39 6.810643673933624E-5 3.405321836966812E-5 0.0 0.4200294219806714 5.107982755450217E-4 40-41 6.810643673933624E-5 3.405321836966812E-5 0.0 0.6069645642209645 5.107982755450217E-4 42-43 6.810643673933624E-5 3.405321836966812E-5 0.0 0.7877190473271629 5.107982755450217E-4 44-45 6.810643673933624E-5 3.405321836966812E-5 0.0 1.0008751677121004 5.107982755450217E-4 46-47 8.51330459241703E-5 3.405321836966812E-5 0.0 1.2493785287647534 5.278248847298559E-4 48-49 1.0215965510900435E-4 3.405321836966812E-5 0.0 1.5144147273358803 5.78904712284358E-4 50-51 1.0215965510900435E-4 3.405321836966812E-5 0.0 1.8144406077818416 5.78904712284358E-4 52-53 1.0215965510900435E-4 3.405321836966812E-5 0.0 2.1054423853598405 5.95931321469192E-4 54-55 1.0215965510900435E-4 3.405321836966812E-5 0.0 2.4137431978696307 6.129579306540261E-4 56-57 1.0215965510900435E-4 3.405321836966812E-5 0.0 2.769360957304075 6.129579306540261E-4 58-59 1.0215965510900435E-4 3.405321836966812E-5 0.0 3.16492314188614 6.129579306540261E-4 60-61 1.0215965510900435E-4 3.405321836966812E-5 0.0 3.608279018450034 6.299845398388601E-4 62-63 1.0215965510900435E-4 3.405321836966812E-5 0.0 4.06474538408625 7.151175857630305E-4 64-65 1.0215965510900435E-4 3.405321836966812E-5 0.0 4.528618324717868 7.321441949478645E-4 66-67 1.0215965510900435E-4 6.810643673933624E-5 0.0 5.036794502448426 7.661974133175327E-4 68-69 1.0215965510900435E-4 6.810643673933624E-5 0.0 5.604938397727969 7.832240225023667E-4 70-71 1.0215965510900435E-4 6.810643673933624E-5 0.0 6.243947040434792 7.832240225023667E-4 72-73 1.0215965510900435E-4 6.810643673933624E-5 0.0 6.913416286973282 7.832240225023667E-4 74-75 1.0215965510900435E-4 6.810643673933624E-5 0.0 7.583804970407753 7.832240225023667E-4 76-77 1.0215965510900435E-4 6.810643673933624E-5 0.0 8.283138889456442 8.343038500568689E-4 78-79 1.0215965510900435E-4 6.810643673933624E-5 0.0 9.038881964734488 8.513304592417029E-4 80-81 1.0215965510900435E-4 6.810643673933624E-5 0.0 9.873645533239346 8.683570684265369E-4 82-83 1.0215965510900435E-4 6.810643673933624E-5 0.0 10.748489739765304 8.853836776113711E-4 84-85 1.0215965510900435E-4 6.810643673933624E-5 0.0 11.622142083648326 8.853836776113711E-4 86 1.0215965510900435E-4 6.810643673933624E-5 0.0 12.270804813762949 8.853836776113711E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3900 0.0 43.189964 1 GTATCAA 6595 0.0 38.79952 1 TATCAAC 8485 0.0 29.731682 2 TCAACGC 8520 0.0 29.446241 4 CAACGCA 8760 0.0 28.690477 5 ATCAACG 8920 0.0 28.126259 3 GTACATG 11165 0.0 27.61738 1 AACGCAG 9290 0.0 27.22039 6 TACATGG 11525 0.0 26.314917 2 ACATGGG 12325 0.0 23.860374 3 CATGGGG 8965 0.0 22.910471 4 ACGCAGA 10685 0.0 22.716606 7 CGCAGAG 11075 0.0 21.747227 8 GTGGTAT 2000 0.0 19.7895 1 GTATATA 685 0.0 18.81195 1 ATGGGGG 5285 0.0 18.778605 5 GCAGAGT 11875 0.0 18.696619 9 GAGTACA 8835 0.0 17.971275 1 AGAGTAC 9920 0.0 17.526438 10-11 AGTACAT 8350 0.0 17.445032 2 >>END_MODULE