##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921573_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2936580 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.95146565051863 31.0 30.0 34.0 26.0 34.0 2 29.939747938077627 31.0 30.0 34.0 26.0 34.0 3 30.11528785185488 31.0 30.0 34.0 26.0 34.0 4 33.773606712570405 35.0 35.0 37.0 30.0 37.0 5 33.27239407746426 35.0 33.0 37.0 27.0 37.0 6 33.16299572972642 35.0 33.0 37.0 27.0 37.0 7 32.96950023496721 35.0 33.0 37.0 26.0 37.0 8 32.87385768478979 35.0 33.0 37.0 26.0 37.0 9 34.17598328668043 37.0 34.0 39.0 26.0 39.0 10-11 33.95762741011653 37.0 33.0 39.0 25.0 39.0 12-13 33.779014874445785 37.0 33.0 39.0 25.0 39.0 14-15 34.625667272813956 38.0 33.0 40.0 25.0 41.0 16-17 34.479810698159085 38.0 33.0 40.0 24.0 41.0 18-19 34.357270532388014 38.0 33.0 40.0 23.0 41.0 20-21 34.22001563042723 38.0 33.0 40.0 22.0 41.0 22-23 34.04591804071403 38.0 33.0 40.0 20.5 41.0 24-25 33.88836078022734 38.0 33.0 40.0 19.0 41.0 26-27 33.79091698506426 38.0 32.5 40.0 18.5 41.0 28-29 33.78380582173821 38.0 32.5 40.0 18.5 41.0 30-31 33.61040836619469 38.0 32.0 40.0 18.0 41.0 32-33 33.42679239114889 38.0 32.0 40.0 17.5 41.0 34-35 33.2123987768084 38.0 32.0 40.0 16.0 41.0 36-37 33.02983402461366 38.0 31.5 40.0 15.5 41.0 38-39 32.84546138705569 37.5 31.0 40.0 15.0 41.0 40-41 32.84196820791533 38.0 31.5 40.0 14.0 41.0 42-43 32.62285107165478 37.0 31.0 40.0 9.0 41.0 44-45 32.40119254370731 37.0 31.0 40.0 8.5 41.0 46-47 32.116477330772526 37.0 30.5 40.0 7.5 41.0 48-49 31.808845323471523 37.0 30.0 40.0 4.5 41.0 50-51 31.53442933616656 36.0 30.0 40.0 2.0 41.0 52-53 31.201113880772873 36.0 29.5 39.0 2.0 41.0 54-55 30.879091664453206 35.5 29.0 39.0 2.0 40.5 56-57 30.534743136573837 35.0 28.0 39.0 2.0 40.0 58-59 30.05806397237603 35.0 28.0 39.0 2.0 40.0 60-61 29.696686111054355 34.5 28.0 38.0 2.0 40.0 62-63 29.3611997629896 34.0 27.0 38.0 2.0 40.0 64-65 28.909233870693118 34.0 26.0 37.5 2.0 40.0 66-67 28.493097072104284 34.0 26.0 37.0 2.0 39.0 68-69 28.065937927793556 33.5 26.0 36.0 2.0 39.0 70-71 27.61024610260916 33.0 25.5 36.0 2.0 39.0 72-73 27.148668519161745 33.0 24.5 35.0 2.0 38.0 74-75 26.630645342541325 32.0 23.5 35.0 2.0 37.0 76-77 25.15112835339068 30.5 21.0 34.0 2.0 35.5 78-79 26.028703457763793 32.0 23.0 35.0 2.0 36.0 80-81 26.090470717637523 32.0 23.0 35.0 2.0 36.0 82-83 25.78726869351422 32.0 21.5 35.0 2.0 35.5 84-85 25.380949437781364 32.0 20.0 35.0 2.0 35.0 86-87 24.953922419957912 32.0 18.5 34.0 2.0 35.0 88-89 24.52510386231603 31.0 16.5 34.0 2.0 35.0 90-91 24.114439756451382 31.0 9.0 34.0 2.0 35.0 92-93 23.712828868956404 31.0 4.5 34.0 2.0 35.0 94-95 23.340714368414957 31.0 2.0 34.0 2.0 35.0 96-97 22.8362123626804 31.0 2.0 34.0 2.0 35.0 98-99 22.10724873832826 30.5 2.0 34.0 2.0 35.0 100-101 19.583769895592834 26.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 84441.0 3 36980.0 4 19105.0 5 13755.0 6 11957.0 7 11929.0 8 13568.0 9 15503.0 10 17333.0 11 19643.0 12 21574.0 13 23919.0 14 25710.0 15 27419.0 16 29099.0 17 29868.0 18 29063.0 19 27784.0 20 27933.0 21 28932.0 22 31080.0 23 34337.0 24 40317.0 25 47036.0 26 55267.0 27 65196.0 28 76864.0 29 90967.0 30 105470.0 31 124670.0 32 148751.0 33 179829.0 34 223560.0 35 283039.0 36 360567.0 37 376123.0 38 169310.0 39 8682.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.16193267825797 18.79955260370785 12.997906712343777 25.040608005690412 2 16.412765870502422 21.182055316047922 37.25943103882748 25.14574777462218 3 19.381668260925384 25.11793484867936 28.98273807719799 26.517658813197258 4 14.496570054199342 16.78755996700495 35.015724416405156 33.700145562390546 5 14.886352451297435 37.0537975211664 33.301148208582774 14.758701818953393 6 33.13792318223221 34.577029120282745 17.48631663057766 14.798731066907381 7 28.968982909075162 31.406232470813535 21.198632344100425 18.426152276010882 8 27.17559980382273 33.45985494068639 20.21884406840011 19.145701187090772 9 27.631205741457155 15.08987049539568 19.12245187384176 38.15647188930541 10-11 26.24705092188523 24.753180913157323 27.274080160375302 21.725688004582153 12-13 26.892334677313524 22.29456241906891 27.21713273091117 23.595970172706394 14-15 24.36643588093147 23.56825452889163 24.589505272115336 27.475804318061563 16-17 24.308513683533278 26.333168170399073 25.23982135140993 24.118496794657716 18-19 24.35654884680692 25.80300083238125 26.479334026842377 23.361116293969452 20-21 25.13619236505039 25.032512743598556 26.158695578846086 23.67259931250496 22-23 24.98694732307659 24.790185886477836 25.973958035132487 24.248908755313085 24-25 24.62794548482526 24.980038842044962 25.996055818315465 24.39595985481431 26-27 24.389859985291736 25.168696165306315 26.06838065479887 24.373063194603088 28-29 24.47153905273055 25.356588844976898 25.89142315209604 24.280448950196515 30-31 24.85235359650884 25.182689803656473 25.66553080063652 24.299425799198165 32-33 24.614080913257098 25.31202014016698 25.584024814102886 24.489874132473037 34-35 24.785717522223745 25.270904359101287 25.79216975935019 24.151208359324773 36-37 24.859522189788034 25.1067188505466 25.76154387796085 24.272215081704516 38-39 24.78254574689698 25.151876461660837 25.68167688374335 24.383900907698834 40-41 24.773781875880573 25.025268751372003 25.713294062528895 24.48765531021852 42-43 24.518742822125304 25.037908716254087 25.669263631596255 24.77408483002435 44-45 24.35352421200772 25.018668767445824 25.838510776455536 24.78929624409092 46-47 24.557561500437462 24.973017421284702 25.673942808344407 24.795478269933426 48-49 24.411690038900847 25.10574842711825 25.60526001692111 24.877301517059795 50-51 24.357976176609426 25.1957013813534 25.687475179710816 24.758847262326363 52-53 24.462635612873214 25.085893332375225 25.61403281732344 24.837438237428124 54-55 24.037946729625123 24.972003830911312 25.805979736495427 25.184069702968138 56-57 24.197691771691918 25.025678767473654 25.653412245025848 25.123217215808584 58-59 24.30299901306581 24.968123864668097 25.705021104317378 25.023856017948713 60-61 24.414822808387257 24.991313802674124 25.64323845962042 24.9506249293182 62-63 24.2188073392152 24.93396651010941 25.67228487028896 25.17494128038643 64-65 24.05146820165094 24.789766710953792 25.752747737422872 25.406017349972398 66-67 24.101521732241775 24.87109349312186 25.59827849802326 25.429106276613105 68-69 23.994361917588712 24.852990340898828 25.52992487895878 25.622722862553683 70-71 23.936043014063916 24.680967898193146 25.588670519601113 25.794318568141822 72-73 23.87207343188079 24.876446567505916 25.408003161877566 25.843476838735725 74-75 23.584828201330808 24.9134048035421 25.593833352241695 25.907933642885396 76-77 23.572464759725946 24.575251767431084 25.749995819659066 26.102287653183904 78-79 23.519769240154233 24.588454646516077 25.810191575111794 26.081584538217896 80-81 23.563448187544957 24.72857109771781 25.64435201735074 26.063628697386488 82-83 23.455060604239105 24.601808157158086 25.69229451509542 26.250836723507387 84-85 23.383237092073134 24.626045395355554 25.538932323200324 26.451785189370984 86-87 23.101782735895735 24.637344243209228 25.8096317166425 26.451241304252537 88-89 23.028117718356587 24.44109621536557 25.824713143625928 26.70607292265192 90-91 23.077636212305524 24.32901807627462 25.815173826749472 26.778171884670382 92-93 23.088301981631528 24.26822505477214 25.738194622768823 26.90527834082751 94-95 22.922471444070837 24.21349026295769 25.82315177363122 27.04088651934025 96-97 22.674554330907633 24.034468061992246 26.006917655448447 27.284059951651674 98-99 22.4841772960161 24.07113022719649 25.949421834905813 27.495270641881596 100-101 22.747763087902456 23.93332479684404 25.99435910603886 27.324553009214643 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 509.0 1 378.5 2 327.0 3 408.0 4 370.0 5 396.5 6 573.0 7 1001.0 8 1343.0 9 1342.5 10 1142.5 11 925.0 12 868.0 13 874.0 14 899.0 15 984.0 16 1118.0 17 1180.5 18 1236.5 19 1346.0 20 1458.5 21 1586.5 22 1749.0 23 1933.5 24 2236.5 25 2648.0 26 3164.5 27 3978.0 28 5176.0 29 6864.0 30 9466.0 31 13086.0 32 17574.5 33 22102.0 34 26638.5 35 31553.0 36 37376.0 37 43515.0 38 49556.0 39 55858.0 40 61904.0 41 68355.0 42 75146.5 43 82557.0 44 90446.5 45 98017.5 46 106370.5 47 115532.5 48 123793.0 49 130424.5 50 135839.5 51 138952.0 52 140194.5 53 141788.5 54 141285.5 55 137038.0 56 129390.0 57 118141.5 58 106336.5 59 93941.0 60 80731.0 61 67133.0 62 53546.0 63 41109.0 64 29745.5 65 20979.5 66 15051.5 67 10994.5 68 7899.0 69 5718.0 70 4195.0 71 2955.5 72 2074.0 73 1547.5 74 1125.5 75 765.0 76 482.0 77 265.0 78 150.5 79 83.0 80 38.0 81 21.0 82 12.5 83 7.5 84 4.0 85 2.5 86 0.5 87 0.0 88 0.0 89 0.0 90 1.0 91 1.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.22948463859319346 2 0.0 3 3.405321836966812E-5 4 0.013008329417213221 5 0.01501746930102364 6 0.10529255119901382 7 0.1352253301459521 8 0.15453350496155394 9 0.11060485326468204 10-11 0.11782413555905169 12-13 0.09388472304517499 14-15 0.1161895810773076 16-17 0.07164797144978172 18-19 0.07585354391843574 20-21 0.05370192536896662 22-23 0.07886725374415136 24-25 0.07256740834576275 26-27 0.050926588071838676 28-29 0.01806523234510894 30-31 0.031822732566454855 32-33 0.03924633417104251 34-35 0.044916195029592244 36-37 0.03619857112695721 38-39 0.038650402849573315 40-41 0.021845139584142095 42-43 0.03097140210721315 44-45 0.017929019471630264 46-47 0.03029033773981979 48-49 3.9161201125118337E-4 50-51 0.016141225507222686 52-53 0.007985479707687173 54-55 0.015800693323526006 56-57 0.010284071947639771 58-59 0.007287388731108978 60-61 0.03023925791226529 62-63 0.01295724958965872 64-65 0.014881256427544967 66-67 0.057924524446805466 68-69 0.0765856881133836 70-71 0.033440260439014095 72-73 0.05499594766701402 74-75 0.04668696238481499 76-77 0.21102779423683332 78-79 0.0774370185726253 80-81 0.01539205470308999 82-83 0.009381661660843567 84-85 0.024824796191488058 86-87 0.17184956650253017 88-89 0.37414271022754364 90-91 0.27302167827881413 92-93 0.27528621730039704 94-95 0.0021112995389194235 96-97 0.006146605915725095 98-99 0.004597184479905196 100-101 0.005652834249364907 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2936580.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.143875666882295 #Duplication Level Percentage of deduplicated Percentage of total 1 77.92513503778378 45.30869362961913 2 12.05035812348874 14.013090489470686 3 3.9896440577445618 6.959201041458467 4 1.7949023927039853 4.174503262222802 5 1.0402874043308792 3.024317074761917 6 0.6370530252713735 2.2224439136753977 7 0.45574505067399246 1.854914849352991 8 0.33168192355468057 1.5428218019292566 9 0.25249351075571047 1.3212856166467173 >10 1.435350871597372 15.104059896409122 >50 0.07035185718553674 2.7291069062804265 >100 0.016525112623948467 1.3871147864340936 >500 2.947701784851233E-4 0.11411199868052362 >1k 1.7686210702510147E-4 0.24433473305855583 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.405321836966812E-5 2 0.0 0.0 0.0 0.0 3.405321836966812E-5 3 0.0 0.0 0.0 0.0 3.405321836966812E-5 4 0.0 0.0 0.0 0.0 6.810643673933624E-5 5 0.0 0.0 0.0 0.0 6.810643673933624E-5 6 0.0 0.0 0.0 0.0 6.810643673933624E-5 7 0.0 0.0 0.0 0.0 6.810643673933624E-5 8 0.0 0.0 0.0 0.0 6.810643673933624E-5 9 0.0 0.0 0.0 3.405321836966812E-5 1.0215965510900435E-4 10-11 0.0 0.0 0.0 3.405321836966812E-5 1.0215965510900435E-4 12-13 0.0 0.0 0.0 3.405321836966812E-5 1.3621287347867248E-4 14-15 0.0 0.0 0.0 3.405321836966812E-5 1.702660918483406E-4 16-17 0.0 0.0 0.0 3.405321836966812E-5 2.043193102180087E-4 18-19 0.0 0.0 0.0 3.405321836966812E-5 2.043193102180087E-4 20-21 0.0 3.405321836966812E-5 0.0 5.107982755450218E-5 2.5539913777251086E-4 22-23 0.0 3.405321836966812E-5 0.0 3.7458540206634927E-4 2.7242574695734496E-4 24-25 0.0 3.405321836966812E-5 0.0 0.0016345544817440696 2.7242574695734496E-4 26-27 0.0 3.405321836966812E-5 0.0 0.0032691089634881393 2.7242574695734496E-4 28-29 0.0 3.405321836966812E-5 0.0 0.01023299212008527 2.7242574695734496E-4 30-31 0.0 3.405321836966812E-5 0.0 0.0320951583134122 2.89452356142179E-4 32-33 0.0 3.405321836966812E-5 0.0 0.07917373270947836 3.405321836966812E-4 34-35 0.0 3.405321836966812E-5 0.0 0.14959578829795206 3.405321836966812E-4 36-37 0.0 6.810643673933624E-5 0.0 0.25630154805930705 3.575587928815152E-4 38-39 0.0 1.0215965510900435E-4 0.0 0.4218342425542638 3.7458540206634927E-4 40-41 0.0 1.0215965510900435E-4 0.0 0.6110509504253248 3.7458540206634927E-4 42-43 0.0 1.0215965510900435E-4 0.0 0.7952618351960443 3.7458540206634927E-4 44-45 0.0 1.0215965510900435E-4 0.0 1.0117211177628398 3.7458540206634927E-4 46-47 0.0 1.0215965510900435E-4 0.0 1.2616717405962037 3.7458540206634927E-4 48-49 0.0 1.0215965510900435E-4 0.0 1.5261460610642312 4.7674505717535363E-4 50-51 0.0 1.0215965510900435E-4 0.0 1.8245714402468178 4.7674505717535363E-4 52-53 0.0 1.0215965510900435E-4 0.0 2.1129000401827978 5.278248847298559E-4 54-55 0.0 1.0215965510900435E-4 0.0 2.419668457865953 5.78904712284358E-4 56-57 0.0 1.0215965510900435E-4 0.0 2.7728684387961504 5.78904712284358E-4 58-59 0.0 1.0215965510900435E-4 0.0 3.1631523745309167 5.78904712284358E-4 60-61 0.0 1.0215965510900435E-4 0.0 3.601791880350612 5.78904712284358E-4 62-63 0.0 1.0215965510900435E-4 0.0 4.052315959381321 6.129579306540261E-4 64-65 0.0 1.0215965510900435E-4 0.0 4.510791464901348 6.129579306540261E-4 66-67 0.0 1.0215965510900435E-4 0.0 5.012872116543734 6.129579306540261E-4 68-69 0.0 1.0215965510900435E-4 0.0 5.573439170736027 6.129579306540261E-4 70-71 0.0 1.0215965510900435E-4 0.0 6.204905025573967 6.470111490236943E-4 72-73 0.0 1.0215965510900435E-4 0.0 6.867308229300751 6.980909765781964E-4 74-75 0.0 1.0215965510900435E-4 0.0 7.537747992562777 7.151175857630305E-4 76-77 0.0 1.0215965510900435E-4 0.0 8.2391761845412 7.151175857630305E-4 78-79 0.0 1.0215965510900435E-4 0.0 8.995804643496857 7.151175857630305E-4 80-81 0.0 1.0215965510900435E-4 0.0 9.82857609872709 7.151175857630305E-4 82-83 0.0 1.0215965510900435E-4 0.0 10.703624624563268 7.491708041326985E-4 84-85 0.0 1.0215965510900435E-4 0.0 11.581533620742498 7.661974133175327E-4 86-87 0.0 1.0215965510900435E-4 0.0 12.459153164565583 7.832240225023667E-4 88-89 0.0 1.0215965510900435E-4 0.0 13.381739983245815 7.832240225023667E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3480 0.0 48.26482 1 GTATCAA 6170 0.0 43.26263 1 TCAACGC 7985 0.0 32.41409 4 TATCAAC 8085 0.0 32.30411 2 CAACGCA 8265 0.0 31.430353 5 ATCAACG 8555 0.0 30.420948 3 AACGCAG 8675 0.0 30.105007 6 GTACATG 10510 0.0 26.982288 1 TACATGG 11065 0.0 24.891539 2 ACGCAGA 10075 0.0 24.837683 7 CGCAGAG 10515 0.0 23.482244 8 ACATGGG 11715 0.0 22.985447 3 GTATAAT 695 0.0 21.22326 1 CATGGGG 8850 0.0 21.035603 4 GCAGAGT 11325 0.0 19.997755 9 GAGTACA 8390 0.0 19.678988 1 AGTACAT 8180 0.0 18.983208 2 AGAGTAC 9190 0.0 18.520493 10-11 GTATAGG 495 0.0 17.302246 1 GTGGTAT 1760 0.0 17.0319 1 >>END_MODULE