##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921572_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5911472 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.12018884636517 31.0 28.0 31.0 16.0 34.0 2 28.08609310845082 31.0 28.0 33.0 16.0 34.0 3 28.17088823223725 31.0 28.0 33.0 16.0 34.0 4 31.594616027953784 35.0 32.0 37.0 18.0 37.0 5 31.526872325539223 35.0 32.0 37.0 17.0 37.0 6 31.62375394825519 35.0 32.0 37.0 18.0 37.0 7 31.433166561560302 35.0 32.0 37.0 17.0 37.0 8 31.384765249670473 35.0 32.0 37.0 17.0 37.0 9 32.582656739302834 37.0 32.0 39.0 17.0 39.0 10-11 32.33717380374973 37.0 32.0 39.0 16.0 39.0 12-13 32.08821499958047 37.0 32.0 39.0 12.0 39.0 14-15 32.741712639423824 38.0 31.5 40.0 10.5 41.0 16-17 32.574290718115556 37.0 31.0 40.0 10.0 41.0 18-19 32.402019581586444 37.0 31.0 40.0 10.0 41.0 20-21 32.27359759125984 37.0 31.0 40.0 10.0 41.0 22-23 32.082523862077 37.0 30.5 40.0 9.0 41.0 24-25 32.16730088546474 37.0 31.0 40.0 8.0 41.0 26-27 31.913255953847028 37.0 30.0 40.0 7.5 41.0 28-29 31.709906855686704 37.0 30.0 40.0 2.0 41.0 30-31 31.438268928618797 37.0 30.0 40.0 2.0 41.0 32-33 31.184797711974277 36.0 30.0 40.0 2.0 41.0 34-35 30.859618636441144 36.0 29.5 39.5 2.0 41.0 36-37 30.57428564323742 36.0 29.0 39.0 2.0 41.0 38-39 30.363175956851357 35.5 28.0 39.0 2.0 40.0 40-41 30.143269899612143 35.0 27.5 39.0 2.0 40.0 42-43 29.909987901490524 35.0 27.0 39.0 2.0 40.0 44-45 29.66965469852517 35.0 26.5 39.0 2.0 40.0 46-47 29.357609915093906 35.0 26.0 39.0 2.0 40.0 48-49 29.07013929863831 35.0 25.0 39.0 2.0 40.0 50-51 28.172799938830803 33.5 23.5 38.0 2.0 39.5 52-53 28.396330051127705 33.5 25.0 38.0 2.0 39.5 54-55 28.98653093510381 35.0 26.0 39.0 2.0 40.0 56-57 28.986643343654507 35.0 26.0 39.0 2.0 40.0 58-59 28.739888305315496 34.5 26.0 39.0 2.0 40.0 60-61 28.37219832894413 34.0 25.0 38.0 2.0 40.0 62-63 27.904515237490763 34.0 23.5 38.0 2.0 40.0 64-65 27.459845449661266 34.0 22.5 37.5 2.0 40.0 66-67 27.12268763177767 33.0 22.0 37.0 2.0 39.0 68-69 26.661906797494773 33.0 21.5 36.0 2.0 39.0 70-71 26.222825550049123 32.5 20.0 36.0 2.0 39.0 72-73 25.72559042823852 32.0 18.5 35.0 2.0 38.0 74-75 25.269806234386294 32.0 16.5 35.0 2.0 37.0 76-77 24.839394401259113 31.5 12.0 35.0 2.0 36.5 78-79 24.43361112088495 31.0 7.5 35.0 2.0 36.0 80-81 23.99796040647744 31.0 4.5 34.0 2.0 36.0 82-83 23.44356363355861 31.0 2.0 34.0 2.0 35.0 84-85 23.03486382072012 30.0 2.0 34.0 2.0 35.0 86-87 22.54521022851838 30.0 2.0 34.0 2.0 35.0 88-89 22.047588231831263 30.0 2.0 34.0 2.0 35.0 90-91 21.4349787159611 29.0 2.0 34.0 2.0 35.0 92-93 20.858057519345437 29.0 2.0 34.0 2.0 35.0 94-95 20.14902557264925 28.5 2.0 34.0 2.0 35.0 96-97 19.50666872819494 27.0 2.0 33.5 2.0 35.0 98 19.050122372228103 26.0 2.0 33.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 364544.0 3 64606.0 4 49421.0 5 38382.0 6 34195.0 7 35963.0 8 40309.0 9 44697.0 10 47159.0 11 49172.0 12 49696.0 13 48893.0 14 48454.0 15 51100.0 16 55022.0 17 59580.0 18 61849.0 19 62537.0 20 64971.0 21 69066.0 22 75753.0 23 83526.0 24 94875.0 25 107578.0 26 123163.0 27 141669.0 28 161325.0 29 186036.0 30 213845.0 31 249010.0 32 293977.0 33 355442.0 34 436097.0 35 506818.0 36 614188.0 37 626246.0 38 285427.0 39 16881.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.337328140355595 16.76378905546357 13.203878653665905 24.695004150514936 2 16.288919980080557 19.42663852650336 39.939818218158536 24.344623275257547 3 20.552830320028903 24.26461409315546 28.042388445686417 27.140167141129222 4 14.849815080414105 14.674244790308165 34.67514923305288 35.80079089622485 5 15.181949501161249 38.53812394221068 31.43773987354882 14.84218668307925 6 34.51427673978859 31.883407259705727 17.975235948644116 15.627080051861569 7 30.21185959553108 32.63668987382577 19.05326771499648 18.098182815646666 8 29.020046856981992 33.95748967305683 19.183278202164463 17.83918526779672 9 30.774887784953137 15.51225416056784 17.554743957508173 36.158114096970856 10-11 27.823692601806165 24.873318251095323 25.49659186362684 21.80639728347167 12-13 27.782904621145825 21.42537166606921 26.315001489557115 24.476722223227853 14-15 25.607686118306898 22.92642835294468 24.012394803873004 27.45349072487542 16-17 25.443848294318073 25.833314372054467 24.61133960039549 24.111497733231975 18-19 25.538978950599162 26.269427828866792 25.66431964551228 22.527273575021763 20-21 25.83064005773875 24.8869501537654 25.96431118815255 23.3180986003433 22-23 25.983429228297407 23.945980835230152 25.54460838670756 24.52598154976489 24-25 25.426358833100743 24.198896018991938 25.211761690694367 25.162983457212952 26-27 24.72737990977308 24.778398564468635 25.73739182343736 24.75682970232092 28-29 24.628623513562754 26.42491227167098 24.536636609991785 24.40982760477448 30-31 26.76329125581156 24.937838485696755 24.714500561349624 23.58436969714206 32-33 25.938082363800312 24.805554096275433 24.767367484887146 24.48899605503711 34-35 25.663519690029347 25.470169744016175 25.321318956412455 23.544991609542024 36-37 25.33486748734794 25.695630827734274 25.652783070899666 23.31671861401812 38-39 25.899660429912757 25.52025924418008 24.92150269078464 23.658577635122523 40-41 25.929462507224592 25.029377891428684 24.616440925528764 24.42471867581796 42-43 25.007604774703935 25.261614856195724 24.399655538706966 25.33112483039337 44-45 24.41210136116728 25.157280298790997 25.5066327678516 24.923985572190123 46-47 24.4090522675635 24.474974250551046 25.23097298131956 25.885000500565898 48-49 24.354290844223435 25.201526818195276 25.603702397536892 24.8404799400444 50-51 24.862956740872306 24.658971962188666 25.954916683026287 24.52315461391274 52-53 24.822934796650227 24.837491124035356 25.53723882001912 24.802335259295297 54-55 23.144837236230174 24.281696657517376 26.71514831805722 25.858317788195233 56-57 24.221721729578356 24.35016164660364 25.5808242776135 25.847292346204505 58-59 24.650690508626248 25.035177398777915 25.809937019179298 24.504195073416543 60-61 26.032173665303134 24.41830651826907 25.94520153252856 23.604318283899236 62-63 25.292492872421697 24.287140358908903 26.10541519479898 24.31495157387042 64-65 24.300130169661813 23.897647951312813 26.50993413449055 25.292287744534825 66-67 24.737410270083686 24.37967459794946 25.751417630192353 25.131497501774504 68-69 23.769334699271006 24.644137179169025 26.109644071427514 25.47688405013246 70-71 24.123301066071605 24.176585985506367 26.04670683590722 25.653406112514816 72-73 23.77702311264905 25.382942892648607 25.416416869832876 25.42361712486947 74-75 23.59705512312196 24.70646755453467 26.128349803384587 25.568127518958782 76-77 23.372202840092353 23.69994037666581 26.059713392472737 26.868143390769095 78-79 23.20443263381202 24.096683793214428 26.644549292782553 26.054334280191 80-81 24.033035209511336 24.33334681619242 25.719876558065202 25.91374141623104 82-83 23.97038826874343 24.51154958607248 26.069597558549347 25.448464586634746 84-85 23.966011522440557 24.73579107747344 25.38878421283689 25.909413187249115 86-87 22.962995373796353 25.326983146583338 25.679538582039797 26.030482897580516 88-89 22.863598524380837 24.145295647568066 26.450486225759214 26.540619602291883 90-91 24.091422682776336 23.276839923976684 26.541285184781906 26.090452208465077 92-93 24.492964969506332 23.368772760866623 25.985672504008217 26.152589765618828 94-95 23.97774999160422 23.91617244630007 25.737599091423785 26.368478470671924 96-97 22.904358496734382 23.68243342086595 26.35936259068276 27.05384549171691 98 22.859148116563237 23.172194892607166 25.813494203792313 28.15516278703728 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 223.0 1 232.5 2 336.5 3 450.0 4 449.0 5 506.0 6 761.0 7 1440.5 8 2084.0 9 2257.0 10 2165.0 11 2119.0 12 2322.0 13 2685.5 14 3134.5 15 3524.5 16 3759.5 17 3814.0 18 3834.5 19 3834.0 20 3731.5 21 3643.0 22 3563.5 23 3525.5 24 3667.0 25 3975.0 26 4411.5 27 5128.5 28 6466.0 29 8786.0 30 12231.0 31 17278.0 32 24460.0 33 33208.5 34 43352.0 35 55283.0 36 68516.0 37 81508.5 38 95245.0 39 109797.0 40 124317.5 41 139224.5 42 156235.5 43 174834.5 44 194159.5 45 218449.5 46 249184.0 47 279043.0 48 301703.0 49 322322.0 50 333338.0 51 335224.0 52 337636.5 53 334197.0 54 323251.0 55 307882.5 56 286627.5 57 257331.0 58 217302.0 59 173224.0 60 137213.5 61 108508.0 62 84851.5 63 63759.5 64 45371.0 65 32353.0 66 23444.5 67 17044.0 68 12132.5 69 8497.5 70 5952.5 71 4143.5 72 2876.5 73 1926.5 74 1310.5 75 851.0 76 480.5 77 296.0 78 187.0 79 116.5 80 79.5 81 57.5 82 44.0 83 30.5 84 23.0 85 20.5 86 18.0 87 17.5 88 18.0 89 14.0 90 12.5 91 13.5 92 9.5 93 6.0 94 9.0 95 10.0 96 9.0 97 11.5 98 6.5 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.26758140781179374 2 0.130119875388059 3 0.1285466631661285 4 0.12321804112410582 5 0.11941188252266102 6 0.045081834101557104 7 0.032902126576933796 8 0.012179707524623308 9 0.008458130225432854 10-11 0.0017508329566646005 12-13 0.005396287083826161 14-15 0.01028508635412635 16-17 0.005117168786386877 18-19 0.04696799714182864 20-21 0.0940459499765879 22-23 0.09356383655373822 24-25 0.06976265809937017 26-27 0.08135029650821318 28-29 0.09709933498796916 30-31 0.07240159472970523 32-33 0.01731379257146105 34-35 0.2872127280650234 36-37 0.37241993195603396 38-39 0.34418669326353907 40-41 0.34064273669908274 42-43 0.3178988245228938 44-45 0.30202291408975634 46-47 0.30689479709960565 48-49 0.3007288201652651 50-51 0.3027164807682418 52-53 0.34784906365115154 54-55 0.33423993211843006 56-57 0.3185923912013793 58-59 0.3006526969932362 60-61 0.3079605215080102 62-63 0.30730078735042643 64-65 0.3241493827594887 66-67 0.3449310087233772 68-69 0.30592211212368087 70-71 0.2832796975101971 72-73 0.2680804374950943 74-75 0.25480117304116473 76-77 0.2586580804239621 78-79 0.2648155992280772 80-81 0.2553763258964941 82-83 0.2644518996283836 84-85 0.25777843488051705 86-87 0.25294038439156946 88-89 0.2760649124279029 90-91 0.2602735832970198 92-93 0.2510034725699454 94-95 0.2648071410978518 96-97 0.26346229839200797 98 0.26301401749006 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5911472.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.422983038374156 #Duplication Level Percentage of deduplicated Percentage of total 1 76.449334542323 38.548034989225435 2 11.512263742504473 11.609653588431856 3 4.403345542185268 6.660894527571245 4 2.2730445823411016 4.584547536834145 5 1.2868919220218258 3.2444464778163615 6 0.8144900102925602 2.464140958434417 7 0.5947348384853518 2.099181327129396 8 0.4110096787241622 1.6579467247132835 9 0.3170912087385042 1.438981617585524 >10 1.7618997125297402 16.2775605329072 >50 0.11847993298711836 4.099491051750673 >100 0.05281591770060157 4.6010172748785125 >500 0.0030430513324997987 1.0453138734087388 >1k 0.001487695319361505 1.415003397141822 >5k 6.762251450578972E-5 0.253786122171219 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 9238 0.1562724140450974 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6916260450865707E-5 2 0.0 0.0 0.0 0.0 3.3832520901731414E-5 3 0.0 0.0 0.0 0.0 3.3832520901731414E-5 4 0.0 1.6916260450865707E-5 1.6916260450865707E-5 0.0 3.3832520901731414E-5 5 1.6916260450865707E-5 1.6916260450865707E-5 1.6916260450865707E-5 0.0 3.3832520901731414E-5 6 3.3832520901731414E-5 1.6916260450865707E-5 1.6916260450865707E-5 0.0 3.3832520901731414E-5 7 3.3832520901731414E-5 1.6916260450865707E-5 1.6916260450865707E-5 0.0 3.3832520901731414E-5 8 3.3832520901731414E-5 1.6916260450865707E-5 1.6916260450865707E-5 0.0 5.074878135259712E-5 9 3.3832520901731414E-5 1.6916260450865707E-5 1.6916260450865707E-5 3.3832520901731414E-5 1.0149756270519424E-4 10-11 8.458130225432854E-5 1.6916260450865707E-5 1.6916260450865707E-5 3.3832520901731414E-5 1.0149756270519424E-4 12-13 1.1841382315605995E-4 1.6916260450865707E-5 1.6916260450865707E-5 3.3832520901731414E-5 1.0995569293062709E-4 14-15 1.268719533814928E-4 2.537439067629856E-5 1.6916260450865707E-5 3.3832520901731414E-5 1.3533008360692566E-4 16-17 1.437882138323585E-4 5.074878135259712E-5 1.6916260450865707E-5 4.229065112716427E-5 1.3533008360692566E-4 18-19 1.5224634405779135E-4 5.074878135259712E-5 1.6916260450865707E-5 5.074878135259712E-5 1.3533008360692566E-4 20-21 1.6916260450865707E-4 5.074878135259712E-5 1.6916260450865707E-5 8.458130225432854E-5 1.3533008360692566E-4 22-23 1.8607886495952276E-4 5.9206911578029975E-5 1.6916260450865707E-5 2.1991138586125418E-4 1.9453699518495564E-4 24-25 2.2836951608668705E-4 6.766504180346283E-5 2.537439067629856E-5 5.582365948785682E-4 2.706601672138513E-4 26-27 2.537439067629856E-4 6.766504180346283E-5 3.3832520901731414E-5 0.001615502873057675 2.706601672138513E-4 28-29 2.537439067629856E-4 6.766504180346283E-5 3.3832520901731414E-5 0.005117168786386876 2.706601672138513E-4 30-31 2.706601672138513E-4 6.766504180346283E-5 3.3832520901731414E-5 0.01956365521142619 2.706601672138513E-4 32-33 2.706601672138513E-4 7.612317202889568E-5 3.3832520901731414E-5 0.05208516592821551 3.044926881155827E-4 34-35 2.87576427664717E-4 8.458130225432854E-5 3.3832520901731414E-5 0.09602515244933918 3.2140894856644845E-4 36-37 3.044926881155827E-4 8.458130225432854E-5 3.3832520901731414E-5 0.1654325690792412 3.2140894856644845E-4 38-39 3.044926881155827E-4 1.0995569293062709E-4 3.3832520901731414E-5 0.2879570435248615 3.298670787918813E-4 40-41 3.3832520901731414E-4 1.3533008360692566E-4 3.3832520901731414E-5 0.43224428704052054 3.3832520901731414E-4 42-43 3.3832520901731414E-4 1.3533008360692566E-4 3.3832520901731414E-5 0.5701963910173304 3.46783339242747E-4 44-45 3.3832520901731414E-4 1.3533008360692566E-4 3.3832520901731414E-5 0.7329561909453348 3.5524146946817984E-4 46-47 3.5524146946817984E-4 1.437882138323585E-4 3.3832520901731414E-5 0.9104500537260432 3.806158601444784E-4 48-49 3.7215772991904553E-4 1.5224634405779135E-4 3.3832520901731414E-5 1.107786690015617 3.890739903699113E-4 50-51 3.7215772991904553E-4 1.5224634405779135E-4 4.229065112716427E-5 1.3288145490666285 3.890739903699113E-4 52-53 3.806158601444784E-4 1.6916260450865707E-4 5.074878135259712E-5 1.5657267766810028 4.144483810462098E-4 54-55 3.890739903699113E-4 1.6916260450865707E-4 5.074878135259712E-5 1.833570386529785 4.482809019479412E-4 56-57 3.975321205953441E-4 1.6916260450865707E-4 5.074878135259712E-5 2.1154544925527854 4.6519716239880695E-4 58-59 4.0599025082077697E-4 1.7762073473408992E-4 5.074878135259712E-5 2.43346327276861 4.8211342284967265E-4 60-61 4.3982277172250836E-4 1.8607886495952276E-4 5.074878135259712E-5 2.786683249112911 4.990296833005383E-4 62-63 4.5673903217337405E-4 1.9453699518495564E-4 5.074878135259712E-5 3.1697688832832163 5.074878135259712E-4 64-65 4.5673903217337405E-4 2.0299512541038849E-4 5.074878135259712E-5 3.5582423464071216 5.074878135259712E-4 66-67 4.5673903217337405E-4 2.1991138586125418E-4 5.074878135259712E-5 3.996762566074913 5.074878135259712E-4 68-69 4.6519716239880695E-4 2.1991138586125418E-4 5.074878135259712E-5 4.475729564480725 5.074878135259712E-4 70-71 4.736552926242398E-4 2.1991138586125418E-4 5.074878135259712E-5 5.006527984907989 5.244040739768369E-4 72-73 4.736552926242398E-4 2.1991138586125418E-4 5.074878135259712E-5 5.542917229414265 6.174435064565983E-4 74-75 4.736552926242398E-4 2.1991138586125418E-4 5.074878135259712E-5 6.091503097705614 6.428178971328969E-4 76-77 4.736552926242398E-4 2.1991138586125418E-4 5.074878135259712E-5 6.691497481507144 6.428178971328969E-4 78-79 5.582365948785683E-4 2.1991138586125418E-4 5.074878135259712E-5 7.359199197763264 6.428178971328969E-4 80-81 5.582365948785683E-4 2.1991138586125418E-4 5.074878135259712E-5 8.042607661848013 6.681922878091955E-4 82-83 5.666947251040011E-4 2.1991138586125418E-4 5.074878135259712E-5 8.756761429302212 6.93566678485494E-4 84-85 5.75152855329434E-4 2.1991138586125418E-4 5.074878135259712E-5 9.492221226794275 6.93566678485494E-4 86 5.75152855329434E-4 2.1991138586125418E-4 5.074878135259712E-5 10.061436474705454 6.93566678485494E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 16280 0.0 40.277576 1 GGTATCA 9715 0.0 36.66073 1 TATCAAC 20295 0.0 31.810581 2 TCAACGC 21145 0.0 30.357735 4 ATATGTA 4405 0.0 30.293886 1 ATCAACG 21410 0.0 29.982239 3 CAACGCA 21595 0.0 29.574686 5 AACGCAG 22650 0.0 28.41169 6 GTACATG 37480 0.0 28.385147 1 TATGTAA 4780 0.0 28.262056 2 TACATGG 38455 0.0 27.279562 2 GTAAGTA 8640 0.0 26.219082 2 TGTAAGT 8520 0.0 26.03217 1 ACATGGG 40550 0.0 25.496231 3 ATTATAT 3065 0.0 25.071995 1 CATGGGG 35140 0.0 24.334658 4 ATGGGGG 27555 0.0 24.211672 5 TGGGGGG 25455 0.0 23.58587 6 ACGCAGA 26930 0.0 23.533892 7 CGCAGAG 27655 0.0 22.733044 8 >>END_MODULE