##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921572_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5911472 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.02355893760471 31.0 30.0 34.0 26.0 34.0 2 29.999061316707582 31.0 30.0 34.0 26.0 34.0 3 30.168092481872534 31.0 30.0 34.0 26.0 34.0 4 33.83384189251002 35.0 35.0 37.0 30.0 37.0 5 33.345620515499355 35.0 33.0 37.0 27.0 37.0 6 33.243009693693885 35.0 33.0 37.0 27.0 37.0 7 33.05722229590194 35.0 33.0 37.0 26.0 37.0 8 32.95069451398907 35.0 33.0 37.0 26.0 37.0 9 34.22725321205954 37.0 34.0 39.0 26.0 39.0 10-11 34.00620209315041 37.0 33.0 39.0 25.5 39.0 12-13 33.78389164323201 37.0 33.0 39.0 25.0 39.0 14-15 34.58010077693001 38.0 33.0 40.0 25.0 41.0 16-17 34.42325913072074 38.0 33.0 40.0 24.0 41.0 18-19 34.29829939142061 38.0 33.0 40.0 23.0 41.0 20-21 34.15929501146246 38.0 33.0 40.0 22.0 41.0 22-23 34.01975362481629 38.0 33.0 40.0 21.5 41.0 24-25 33.84496746326465 38.0 32.5 40.0 19.5 41.0 26-27 33.74757133248707 38.0 32.5 40.0 19.5 41.0 28-29 33.750943589007946 38.0 32.5 40.0 19.0 41.0 30-31 33.56945021476884 38.0 32.0 40.0 18.0 41.0 32-33 33.385180543864536 38.0 32.0 40.0 18.0 41.0 34-35 33.194919725577655 38.0 32.0 40.0 16.5 41.0 36-37 33.04605967853692 37.5 31.5 40.0 16.0 41.0 38-39 32.87569280544676 37.0 31.0 40.0 15.5 41.0 40-41 32.89566794869366 37.0 31.5 40.0 15.0 41.0 42-43 32.705848052735426 37.0 31.0 40.0 14.0 41.0 44-45 32.52503817999984 37.0 31.0 40.0 10.5 41.0 46-47 32.25653162190399 37.0 31.0 40.0 9.0 41.0 48-49 31.986521377416658 37.0 30.0 40.0 8.0 41.0 50-51 31.73043702143899 36.0 30.0 40.0 7.0 41.0 52-53 31.426339750911445 36.0 30.0 39.0 2.0 41.0 54-55 31.12480825418779 35.5 29.0 39.0 2.0 40.5 56-57 30.809287094652568 35.0 29.0 39.0 2.0 40.0 58-59 30.336566002511727 35.0 28.0 39.0 2.0 40.0 60-61 29.958303194195963 35.0 28.0 38.0 2.0 40.0 62-63 29.57728827946745 34.0 27.5 38.0 2.0 40.0 64-65 29.158008783599076 34.0 26.5 37.5 2.0 40.0 66-67 28.764014445133125 34.0 26.0 37.0 2.0 39.0 68-69 28.332923593311445 34.0 26.0 36.5 2.0 39.0 70-71 27.87565981873889 33.0 26.0 36.0 2.0 39.0 72-73 27.39010461353788 33.0 25.0 35.5 2.0 38.0 74-75 26.84875095407709 32.5 24.5 35.0 2.0 37.0 76-77 25.377177376463933 30.5 21.5 34.0 2.0 35.5 78-79 26.269821543602 32.0 24.0 34.5 2.0 36.0 80-81 26.334528777265632 32.0 24.0 35.0 2.0 36.0 82-83 26.018298149767098 32.0 23.5 35.0 2.0 35.5 84-85 25.618815838085673 32.0 21.5 35.0 2.0 35.0 86-87 25.201247337380607 32.0 20.0 34.0 2.0 35.0 88-89 24.790014568283503 31.5 18.5 34.0 2.0 35.0 90-91 24.378555967109378 31.0 15.0 34.0 2.0 35.0 92-93 23.959162455645565 31.0 8.5 34.0 2.0 35.0 94-95 23.572415973551088 31.0 2.0 34.0 2.0 35.0 96-97 23.054214331049863 31.0 2.0 34.0 2.0 35.0 98-99 22.354570316834792 31.0 2.0 34.0 2.0 35.0 100-101 19.79992309867999 26.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 155153.0 3 72690.0 4 41009.0 5 28522.0 6 23829.0 7 23284.0 8 26173.0 9 29427.0 10 33218.0 11 36583.0 12 40752.0 13 44627.0 14 48460.0 15 52051.0 16 55282.0 17 57390.0 18 56684.0 19 55279.0 20 55428.0 21 57731.0 22 62770.0 23 71164.0 24 82283.0 25 96167.0 26 114066.0 27 134413.0 28 158395.0 29 184946.0 30 218435.0 31 255926.0 32 307163.0 33 376392.0 34 472841.0 35 561656.0 36 708423.0 37 768122.0 38 331527.0 39 13211.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 43.27407641242031 18.117335790028513 13.964287839545344 24.64429995800584 2 16.251417582625784 20.53676309386224 38.801283335182845 24.410535988329134 3 20.316692855870514 25.012090903293245 28.416929869715972 26.254286371120273 4 15.45080301054727 15.597906144647636 34.22400516747341 34.727285677331686 5 15.257829458151248 38.71823763384647 31.441557584647477 14.582375323354805 6 34.53737456939457 32.448385773687576 17.710884465487045 15.303355191430803 7 30.084527122096954 32.6675016948452 19.14516107720668 18.102810105851173 8 28.953948140892738 34.4200977718635 19.020902196452894 17.605051890790865 9 30.34755475395122 15.533229181220442 17.567226801810385 36.55198926301795 10-11 27.779682717816577 25.10354635851069 25.573894825912802 21.542876097759923 12-13 27.762187449572256 21.556406179967343 26.526082224931834 24.15532414552857 14-15 25.52670722717455 23.08893573760691 24.06524175618051 27.31911527903803 16-17 25.532442027164436 26.000861505864513 24.607427826029987 23.859268640941064 18-19 25.632666314699833 26.292946958733115 25.68713737279188 22.387249353775175 20-21 25.797724286514384 24.876506652688384 26.031559796506997 23.294209264290235 22-23 25.953399335732207 24.025277255109238 25.539036144659903 24.48228726449865 24-25 25.449857386911084 24.33726622173629 25.209543518766885 25.003332872585744 26-27 24.75860639090109 24.94095694265791 25.711292397264913 24.58914426917609 28-29 24.746165624709196 26.4554298814791 24.61819519994586 24.180209293865847 30-31 26.681028268343148 24.972375026821183 24.766571091874315 23.58002561296135 32-33 26.000445920315645 24.89890427986196 24.75275749254014 24.34789230728225 34-35 25.61424200667959 25.65943772164178 25.35683544359497 23.36948482808366 36-37 25.385879959287582 25.790161143027625 25.59258965620615 23.231369241478642 38-39 25.97899084044507 25.515534334729267 24.865106174972198 23.64036864985346 40-41 26.009651327376883 25.063223630650988 24.670383930483236 24.256741111488896 42-43 25.044347235597325 25.305701067058028 24.55820711102402 25.091744586320626 44-45 24.403720963913802 25.228123153679512 25.54991164732563 24.818244235081053 46-47 24.4181464906206 24.620206603546503 25.313989756545567 25.64765714928733 48-49 24.28416015839097 25.25552115150129 25.673709723911976 24.78660896619576 50-51 24.825224577112845 24.677976706310627 25.98459641427832 24.512202302298203 52-53 24.831724038758413 24.830615930535995 25.52560279818473 24.81205723252086 54-55 23.277975626208754 24.39373869919258 26.59219673907361 25.73608893552506 56-57 24.281965494687913 24.4261915951965 25.460939850018388 25.8309030600972 58-59 24.677466928311766 25.080304963889304 25.726948658366805 24.51527944943213 60-61 25.958477043161388 24.597188737520884 25.77399825454164 23.670335964776093 62-63 25.27591468869332 24.498987718542697 25.862253757343616 24.362843835420367 64-65 24.28900754471849 24.075728207410517 26.307260134554124 25.328004113316872 66-67 24.75170333954925 24.613770624106184 25.513278457022253 25.121247579322315 68-69 23.824627393141057 24.83995219770202 25.82214585863244 25.513274550524486 70-71 24.193309159126294 24.402456634621757 25.684255930717264 25.71997827553469 72-73 23.886850597790115 25.569174911442026 25.054596327386196 25.489378163381666 74-75 23.690849353850922 24.915745992169747 25.658516598035312 25.734888055944015 76-77 23.449714235929015 23.972290089093843 25.787321628402633 26.79067404657451 78-79 23.294566501133346 24.347499948578555 26.303639444844766 26.054294105443333 80-81 24.06760958285463 24.660571913326695 25.410323181981337 25.861495321837342 82-83 23.929431528941244 24.808238402058585 25.72185411416792 25.540475954832253 84-85 23.84364537000023 25.04734167094969 25.077468765664758 26.03154419338532 86-87 22.996945818675893 25.606602230266585 25.28524769165689 26.11120425940064 88-89 22.904169959407174 24.612410340388145 25.913915905303558 26.569503794901124 90-91 23.90723811465656 23.752638364994844 26.069327657325264 26.270795863023334 92-93 24.234943520549848 23.862764884982628 25.573093692394412 26.32919790207311 94-95 23.69458287661923 24.530561056518756 25.267204711758595 26.507651355103416 96-97 22.5998372055589 24.31725681131823 25.85974386816205 27.223162114960825 98-99 22.11765760713496 23.905786960381413 25.98511041158889 27.99144502089474 100-101 22.775644995747875 24.344185738068802 25.82325170190705 27.05691756427627 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 226.0 1 212.5 2 263.5 3 353.0 4 337.5 5 357.0 6 552.0 7 1144.0 8 1619.5 9 1639.0 10 1458.5 11 1217.0 12 1216.5 13 1360.5 14 1561.5 15 1704.0 16 1935.0 17 2235.5 18 2432.5 19 2602.5 20 2745.5 21 2884.5 22 3023.0 23 3201.5 24 3346.5 25 3592.0 26 4086.0 27 4761.0 28 5762.0 29 7384.5 30 10083.5 31 14004.5 32 19910.0 33 27530.0 34 35937.0 35 45859.5 36 58044.5 37 70950.0 38 83660.0 39 97096.0 40 111392.5 41 125214.0 42 140152.0 43 158062.5 44 176649.5 45 197237.0 46 221872.0 47 249704.0 48 278964.0 49 303266.0 50 322813.5 51 335162.0 52 336602.0 53 331673.0 54 320420.5 55 303670.0 56 282036.0 57 252193.0 58 213864.5 59 172967.0 60 136952.5 61 108429.0 62 84612.0 63 63629.5 64 45622.5 65 32160.0 66 23023.5 67 16651.0 68 12076.5 69 8434.5 70 5867.0 71 4187.5 72 2799.5 73 1881.0 74 1284.5 75 775.0 76 447.5 77 240.5 78 137.5 79 78.5 80 38.5 81 18.5 82 12.5 83 9.0 84 4.5 85 4.5 86 3.0 87 0.0 88 0.0 89 0.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.22046962245613275 2 0.0 3 5.074878135259712E-5 4 0.011046318074415307 5 0.013228515672576983 6 0.10850089453185265 7 0.1400328040122663 8 0.15842077912235736 9 0.11244238321690436 10-11 0.12234685371088623 12-13 0.09718391629022348 14-15 0.12051989758219271 16-17 0.07398326508186116 18-19 0.07892281313351394 20-21 0.05513009280937133 22-23 0.08150254285227097 24-25 0.07452458541628887 26-27 0.05196675210505945 28-29 0.018980044225871323 30-31 0.033223535525500246 32-33 0.039660172627054645 34-35 0.04611372598905991 36-37 0.03752872381024557 38-39 0.0386959457813553 40-41 0.021999596716350853 42-43 0.03144732817815935 44-45 0.018066566161524574 46-47 0.031202042401621794 48-49 4.0599025082077697E-4 50-51 0.017423748264391678 52-53 0.008407381444080257 54-55 0.015952033605166362 56-57 0.010386583916831544 58-59 0.006961041175531239 60-61 0.031286623703876124 62-63 0.013761377876779252 64-65 0.015453003921865825 66-67 0.05952832052659642 68-69 0.07854219727336947 70-71 0.03392556033421117 72-73 0.05644110299431342 74-75 0.04822825854541813 76-77 0.2004576863427586 78-79 0.07449075289538715 80-81 0.016552560851172092 82-83 0.010437332698184141 84-85 0.025535095150581784 86-87 0.16731027398928727 88-89 0.3764544600735654 90-91 0.27487231606611684 92-93 0.27605645429767744 94-95 0.0022583207701905718 96-97 0.0056923216417163105 98-99 0.004981838702779951 100-101 0.005227124479317503 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5911472.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.74487575907914 #Duplication Level Percentage of deduplicated Percentage of total 1 73.45643196087207 34.33711785716215 2 12.616105226510724 11.794765427534257 3 5.080588045953905 7.1247437097353385 4 2.5484716982188744 4.765119716350829 5 1.540100464036929 3.599590242395318 6 1.0022824314150816 2.8110940639203448 7 0.6571317828418314 2.150228048239851 8 0.4898979695176181 1.8320175775780958 9 0.35763668845867497 1.5045914312000328 >10 2.039178054983861 17.44126368947481 >50 0.14281329305912915 4.5763388159648875 >100 0.06390544146280268 5.090289226279658 >500 0.003528837359907994 1.1056895253752876 >1k 0.0018553466178268623 1.6184285208422546 >5k 7.275869087527914E-5 0.24872214794664288 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 9037 0.15287224569447339 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 1.6916260450865707E-5 0.0 0.0 0.0 4 0.0 1.6916260450865707E-5 0.0 0.0 0.0 5 0.0 1.6916260450865707E-5 0.0 0.0 0.0 6 0.0 1.6916260450865707E-5 0.0 0.0 0.0 7 0.0 1.6916260450865707E-5 0.0 0.0 0.0 8 0.0 1.6916260450865707E-5 0.0 0.0 3.3832520901731414E-5 9 0.0 1.6916260450865707E-5 0.0 3.3832520901731414E-5 3.3832520901731414E-5 10-11 8.458130225432854E-5 1.6916260450865707E-5 0.0 4.229065112716427E-5 3.3832520901731414E-5 12-13 1.0149756270519424E-4 1.6916260450865707E-5 0.0 5.074878135259712E-5 3.3832520901731414E-5 14-15 1.0149756270519424E-4 3.3832520901731414E-5 0.0 5.074878135259712E-5 6.766504180346283E-5 16-17 1.0995569293062709E-4 3.3832520901731414E-5 0.0 5.9206911578029975E-5 1.0149756270519424E-4 18-19 1.1841382315605995E-4 3.3832520901731414E-5 0.0 7.612317202889568E-5 1.1841382315605995E-4 20-21 1.268719533814928E-4 3.3832520901731414E-5 0.0 1.0995569293062709E-4 1.268719533814928E-4 22-23 1.8607886495952276E-4 3.3832520901731414E-5 0.0 2.452857765375528E-4 1.7762073473408992E-4 24-25 2.1991138586125418E-4 5.074878135259712E-5 0.0 5.920691157802998E-4 2.1991138586125418E-4 26-27 2.1991138586125418E-4 6.766504180346283E-5 0.0 0.001657793524184839 2.368276463121199E-4 28-29 2.1991138586125418E-4 6.766504180346283E-5 0.0 0.005294789521120966 2.368276463121199E-4 30-31 2.368276463121199E-4 6.766504180346283E-5 0.0 0.019589029602102487 2.368276463121199E-4 32-33 2.6220203698841847E-4 6.766504180346283E-5 0.0 0.051916003323706855 2.706601672138513E-4 34-35 3.129508183410156E-4 6.766504180346283E-5 0.0 0.09594057114708485 2.87576427664717E-4 36-37 3.5524146946817984E-4 7.612317202889568E-5 0.0 0.16642217031561682 2.87576427664717E-4 38-39 3.5524146946817984E-4 8.458130225432854E-5 0.0 0.29065518706677457 3.298670787918813E-4 40-41 4.0599025082077697E-4 8.458130225432854E-5 0.0 0.43806348063561834 3.636995996936127E-4 42-43 4.0599025082077697E-4 1.0149756270519424E-4 8.458130225432854E-6 0.5784853586382546 3.7215772991904553E-4 44-45 4.0599025082077697E-4 1.0149756270519424E-4 1.6916260450865707E-5 0.7433596911226171 3.7215772991904553E-4 46-47 4.0599025082077697E-4 1.0149756270519424E-4 1.6916260450865707E-5 0.9228073819854006 3.806158601444784E-4 48-49 4.0599025082077697E-4 1.0149756270519424E-4 1.6916260450865707E-5 1.1202539739679052 3.890739903699113E-4 50-51 4.0599025082077697E-4 1.0149756270519424E-4 1.6916260450865707E-5 1.3403852712150206 3.975321205953441E-4 52-53 4.313646414970755E-4 1.0149756270519424E-4 1.6916260450865707E-5 1.5751660500125857 4.6519716239880695E-4 54-55 4.3982277172250836E-4 1.0149756270519424E-4 1.6916260450865707E-5 1.839964732980212 5.328622042022697E-4 56-57 4.3982277172250836E-4 1.0995569293062709E-4 1.6916260450865707E-5 2.1186432076477737 5.497784646531355E-4 58-59 4.3982277172250836E-4 1.1841382315605995E-4 1.6916260450865707E-5 2.4322199276254715 5.582365948785683E-4 60-61 4.3982277172250836E-4 1.1841382315605995E-4 1.6916260450865707E-5 2.7817944498426113 5.582365948785683E-4 62-63 4.3982277172250836E-4 1.1841382315605995E-4 1.6916260450865707E-5 3.161665994527252 5.920691157802997E-4 64-65 4.3982277172250836E-4 1.1841382315605995E-4 1.6916260450865707E-5 3.5467223730400823 6.005272460057325E-4 66-67 4.3982277172250836E-4 1.5224634405779135E-4 1.6916260450865707E-5 3.980336877177123 6.259016366820312E-4 68-69 5.582365948785683E-4 1.5224634405779135E-4 1.6916260450865707E-5 4.452393583188755 6.597341575837626E-4 70-71 5.666947251040011E-4 1.5224634405779135E-4 1.6916260450865707E-5 4.977212105546639 7.273991993872254E-4 72-73 5.75152855329434E-4 1.5224634405779135E-4 1.6916260450865707E-5 5.508526471917654 7.950642411906882E-4 74-75 5.75152855329434E-4 1.5224634405779135E-4 3.3832520901731414E-5 6.055733664982258 7.950642411906882E-4 76-77 5.75152855329434E-4 1.607044742832242E-4 3.3832520901731414E-5 6.656912187015349 7.950642411906882E-4 78-79 5.920691157802997E-4 1.6916260450865707E-4 3.3832520901731414E-5 7.326017952888892 7.950642411906882E-4 80-81 5.920691157802997E-4 1.6916260450865707E-4 3.3832520901731414E-5 8.007548712063594 8.119805016415539E-4 82-83 6.259016366820312E-4 1.6916260450865707E-4 3.3832520901731414E-5 8.725060357217288 8.288967620924196E-4 84-85 6.597341575837626E-4 1.6916260450865707E-4 3.3832520901731414E-5 9.464216357617865 8.288967620924196E-4 86-87 6.681922878091955E-4 1.6916260450865707E-4 3.3832520901731414E-5 10.226471511664101 8.373548923178524E-4 88-89 6.766504180346283E-4 1.6916260450865707E-4 3.3832520901731414E-5 11.052670130214608 8.62729282994151E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 16445 0.0 39.607822 1 GGTATCA 10405 0.0 36.03259 1 TATCAAC 21550 0.0 29.793352 2 TCAACGC 22295 0.0 28.777712 4 GTACATG 38435 0.0 28.409733 1 CAACGCA 22855 0.0 28.010254 5 ATCAACG 22895 0.0 27.961317 3 ATATGTA 4625 0.0 27.56985 1 TACATGG 39440 0.0 27.212067 2 AACGCAG 23955 0.0 26.719736 6 TATGTAA 4930 0.0 26.489622 2 ATTATAT 3530 0.0 26.41756 1 ACATGGG 41550 0.0 25.37408 3 GTAAGTA 8875 0.0 24.506828 2 TTATATG 3685 0.0 24.485338 2 CATGGGG 35600 0.0 24.358984 4 TGTAAGT 8785 0.0 24.100698 1 ATGGGGG 28510 0.0 24.070162 5 TGGGGGG 25405 0.0 23.867678 6 TATATGT 3605 0.0 23.3172 3 >>END_MODULE