##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921571_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6178948 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.101429078218494 31.0 30.0 34.0 26.0 34.0 2 30.088994760920468 31.0 30.0 34.0 26.0 34.0 3 30.263872749859686 31.0 30.0 34.0 26.0 34.0 4 33.93054853350441 35.0 35.0 37.0 30.0 37.0 5 33.45743353075637 35.0 35.0 37.0 28.0 37.0 6 33.35576670980238 35.0 33.0 37.0 28.0 37.0 7 33.16671980408316 35.0 33.0 37.0 27.0 37.0 8 33.064279550499535 35.0 33.0 37.0 26.0 37.0 9 34.37412129054978 37.0 34.0 39.0 27.0 39.0 10-11 34.16430410160435 37.0 33.5 39.0 26.0 39.0 12-13 33.97443448302203 37.0 33.0 39.0 25.0 39.0 14-15 34.821764481591366 38.0 33.0 40.0 25.0 41.0 16-17 34.666794493172624 38.0 33.0 40.0 25.0 41.0 18-19 34.52706965651758 38.0 33.0 40.0 24.5 41.0 20-21 34.3860069707659 38.0 33.0 40.0 23.5 41.0 22-23 34.22086308219457 38.0 33.0 40.0 23.0 41.0 24-25 34.052666813185674 38.0 33.0 40.0 22.0 41.0 26-27 33.95893297694042 38.0 32.5 40.0 21.5 41.0 28-29 33.963345054854 38.0 33.0 40.0 21.5 41.0 30-31 33.79978387906809 38.0 32.5 40.0 19.5 41.0 32-33 33.618908752752084 38.0 32.0 40.0 19.0 41.0 34-35 33.41823252113467 38.0 32.0 40.0 18.0 41.0 36-37 33.249272691726816 38.0 32.0 40.0 17.5 41.0 38-39 33.06972894091356 37.5 32.0 40.0 16.0 41.0 40-41 33.08186134597669 38.0 32.0 40.0 15.5 41.0 42-43 32.87276450619102 37.5 31.0 40.0 15.0 41.0 44-45 32.66898103042783 37.0 31.0 40.0 13.5 41.0 46-47 32.3860971964807 37.0 31.0 40.0 9.0 41.0 48-49 32.0888912643382 37.0 30.5 40.0 8.5 41.0 50-51 31.810380990421024 36.5 30.0 40.0 7.5 41.0 52-53 31.473568963519355 36.0 30.0 39.0 4.5 41.0 54-55 31.140789014570117 36.0 29.0 39.0 2.0 40.0 56-57 30.78732043059757 35.0 29.0 39.0 2.0 40.0 58-59 30.291801371366127 35.0 28.0 39.0 2.0 40.0 60-61 29.915107312765862 34.5 28.0 38.0 2.0 40.0 62-63 29.55280567177455 34.0 27.5 38.0 2.0 40.0 64-65 29.088929377622208 34.0 26.5 37.5 2.0 40.0 66-67 28.660846393269534 34.0 26.0 37.0 2.0 39.0 68-69 28.21763397264389 33.5 26.0 36.0 2.0 39.0 70-71 27.74224342072469 33.0 26.0 36.0 2.0 39.0 72-73 27.26169462827653 33.0 25.0 35.0 2.0 38.0 74-75 26.718249854182297 32.0 24.0 35.0 2.0 37.0 76-77 25.256564547880966 30.5 21.0 34.0 2.0 35.5 78-79 26.13581988390257 32.0 23.5 34.5 2.0 36.0 80-81 26.195864490201245 32.0 24.0 35.0 2.0 36.0 82-83 25.87923567248017 32.0 22.5 35.0 2.0 35.5 84-85 25.457265702834853 32.0 20.0 34.5 2.0 35.0 86-87 25.0159845171055 31.5 19.5 34.0 2.0 35.0 88-89 24.574881193368192 31.0 17.5 34.0 2.0 35.0 90-91 24.142703175362538 31.0 12.5 34.0 2.0 35.0 92-93 23.716328896116295 31.0 7.0 34.0 2.0 35.0 94-95 23.318620904399907 31.0 2.0 34.0 2.0 35.0 96-97 22.77092160348331 31.0 2.0 34.0 2.0 35.0 98-99 21.99995031516692 30.0 2.0 34.0 2.0 35.0 100-101 19.419161239097658 26.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 152269.0 3 71174.0 4 38644.0 5 27642.0 6 24429.0 7 24136.0 8 27378.0 9 31409.0 10 35476.0 11 39671.0 12 43895.0 13 48204.0 14 51902.0 15 55822.0 16 59112.0 17 60871.0 18 60118.0 19 59567.0 20 60235.0 21 62477.0 22 67622.0 23 75764.0 24 86832.0 25 102559.0 26 120589.0 27 142069.0 28 167978.0 29 196618.0 30 230110.0 31 271310.0 32 322354.0 33 392215.0 34 489246.0 35 604083.0 36 758168.0 37 779005.0 38 324583.0 39 13412.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.13772335048351 18.382819720076153 13.922135536029806 24.55732139341053 2 16.312453187824204 19.76687617374349 38.11631041400575 25.804360224426553 3 20.407590880055338 23.578652069990635 27.953867822981316 28.05988922697271 4 14.879850390420273 15.531883486068951 34.09472381500544 35.49354230850534 5 15.425943715751028 37.01494228408225 32.51938903595843 15.03972496420828 6 35.32091609167786 33.115450796678594 16.553018992978302 15.010614118665247 7 31.054766408846866 30.99117442435398 19.098290292871557 18.855768873927595 8 28.376167429014153 34.30816560067688 18.545693844273643 18.769973126035328 9 28.111052875030683 15.761750884409842 18.16668138320322 37.96051485735626 10-11 27.2007397695139 24.83234634746094 25.82718533060516 22.139728552420003 12-13 27.27781530147848 21.624278294231512 26.571529168604833 24.52637723568517 14-15 24.77013939123547 23.28908776705136 23.67674247550869 28.26403036620448 16-17 25.027082967246976 26.321664187401662 24.44818201179196 24.203070833559394 18-19 25.08385262927736 25.9265656823326 25.697184666901514 23.292397021488526 20-21 25.4988122746196 24.87408653635962 25.702344846793952 23.924756342226836 22-23 25.46289416409374 24.309463987447486 25.523008553930254 24.70463329452852 24-25 25.145283489459842 24.721142509166764 25.313176170300984 24.820397831072412 26-27 24.797852918435996 24.970914817048733 25.524848906826215 24.706383357689056 28-29 24.758538325667164 25.42554038724515 25.288452573346593 24.52746871374109 30-31 25.497355601464072 24.996555782004233 25.142232847268236 24.36385576926346 32-33 25.22515856844345 24.98526088377384 25.00103009888221 24.788550448900498 34-35 25.214322265463878 25.215083242373655 25.343906918599675 24.22668757356279 36-37 25.156251644274846 25.119063712462975 25.45165852185661 24.273026121405564 38-39 25.36014509500914 25.082291876209446 25.125932090128256 24.43163093865316 40-41 25.266698086475376 24.895520232956596 25.214396488362894 24.623385192205134 42-43 24.953402377221426 24.93690592432305 25.074543650075753 25.035148048379774 44-45 24.66686900079315 24.960261577558718 25.395627964194954 24.977241457453182 46-47 24.89717785165879 24.734292642466276 25.32047865246992 25.048050853405012 48-49 24.676915756752088 25.012047003340793 25.32855849867028 24.98247874123684 50-51 24.778969842454302 24.96718135156178 25.483571251673304 24.770277554310614 52-53 24.95017147131917 24.909004111637593 25.30933989227213 24.831484524771106 54-55 24.299558356128816 24.749627363742437 25.707090298605127 25.24372398152362 56-57 24.725041188587973 24.809902871167083 25.20652562546038 25.25853031478456 58-59 24.839562349412045 24.857608828564192 25.48684019179118 24.81598863023258 60-61 25.288887478652867 24.79579683470726 25.48009497723755 24.435220709402323 62-63 24.924273177894662 24.7924047543204 25.49990871021125 24.783413357573686 64-65 24.530227756441477 24.558027803932212 25.739970900189007 25.171773539437304 66-67 24.78929861313134 24.858557436040645 25.26904996148824 25.083093989339776 68-69 24.461106830341002 24.845703994127224 25.36952448899685 25.32366468653493 70-71 24.450644740187524 24.611533321768825 25.472225714149495 25.465596223894156 72-73 24.381787112245114 25.05076038974782 25.086141664681698 25.48131083332537 74-75 24.195543467340404 24.950957966133693 25.36618902007333 25.48730954645257 76-77 24.196829673601282 24.40383684863926 25.52579595442534 25.873537523334118 78-79 24.100469321762194 24.501979288168872 25.71968446703362 25.677866923035314 80-81 24.409504579837837 24.723233345440914 25.357222171504194 25.51003990321706 82-83 24.29304305468816 24.672079757946104 25.51227130922155 25.522605878144184 84-85 24.167510798342846 24.74515182431593 25.241060129559877 25.846277247781344 86-87 23.908467442406145 24.90574372229321 25.38852422676297 25.797264608537674 88-89 23.742243583303086 24.55546474009745 25.53199127705928 26.170300399540185 90-91 24.018954258760573 24.21852914380784 25.73735438806718 26.025162209364407 92-93 24.20707665423349 24.24496203185715 25.5071155376624 26.04084577624696 94-95 23.95172439241576 24.404278879409542 25.411389629142423 26.232607099032272 96-97 23.55564324187584 24.199940779363963 25.709419601350763 26.534996377409442 98-99 23.288461848151023 24.097296082126736 25.6821499145727 26.93209215514954 100-101 23.772488307476053 24.009385579564395 25.657097793968 26.561028318991557 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 184.0 1 144.5 2 139.5 3 195.0 4 195.0 5 224.5 6 366.5 7 820.5 8 1260.0 9 1302.5 10 1159.0 11 996.5 12 964.0 13 1072.0 14 1194.5 15 1288.5 16 1411.5 17 1524.0 18 1689.5 19 1825.5 20 1925.0 21 2061.5 22 2208.0 23 2425.5 24 2722.5 25 3052.0 26 3630.5 27 4575.0 28 5721.5 29 7548.0 30 10905.0 31 15796.0 32 23010.5 33 31936.5 34 41650.5 35 52976.5 36 68182.5 37 83762.5 38 97046.5 39 111046.5 40 124008.0 41 137007.5 42 152443.0 43 170760.0 44 189879.5 45 208228.0 46 229589.0 47 251913.0 48 274300.5 49 292982.5 50 304705.5 51 313541.0 52 316336.0 53 315536.5 54 312139.0 55 302957.0 56 285892.0 57 260616.5 58 233707.5 59 203597.0 60 170668.0 61 139629.0 62 111234.5 63 84607.0 64 60209.0 65 42433.0 66 30822.5 67 22215.0 68 15547.5 69 10627.5 70 7148.0 71 4807.0 72 3204.0 73 2140.0 74 1427.5 75 891.0 76 521.5 77 295.5 78 146.0 79 69.5 80 42.5 81 29.0 82 15.5 83 9.5 84 6.0 85 4.5 86 5.0 87 2.0 88 1.0 89 1.0 90 0.5 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.21709197099570995 2 0.0 3 1.1328789301997687E-4 4 0.011879044782380431 5 0.013643099116548643 6 0.10534155652386133 7 0.1352819282505695 8 0.1522589282188489 9 0.10929044879484338 10-11 0.11807835249625018 12-13 0.09406941116837364 14-15 0.11682409368067187 16-17 0.07125808470956545 18-19 0.0764369598190501 20-21 0.053051101902783455 22-23 0.07906685733558529 24-25 0.07231004371617952 26-27 0.05054258427162682 28-29 0.018708686333013324 30-31 0.031218906519362197 32-33 0.03813755998593935 34-35 0.04331643509542401 36-37 0.03581515817902983 38-39 0.03731217676536524 40-41 0.02130621588011422 42-43 0.030142671535672416 44-45 0.01696081598356225 46-47 0.030725294985489437 48-49 4.126916102870586E-4 50-51 0.017122655830733646 52-53 0.008245740213382603 54-55 0.01628918061780096 56-57 0.010665245928594965 58-59 0.007404173008091345 60-61 0.030571547130676616 62-63 0.013270867468054434 64-65 0.014581770230142737 66-67 0.05763926157009251 68-69 0.07599190023932877 70-71 0.03240842939607195 72-73 0.05445910857317459 74-75 0.0464237601611148 76-77 0.19440202442228027 78-79 0.07292503513543082 80-81 0.016183984717139555 82-83 0.010592417997367837 84-85 0.024203149144482197 86-87 0.1617670192401684 88-89 0.3721750045476997 90-91 0.2727001424838014 92-93 0.274156701108344 94-95 0.0021686539520967 96-97 0.00580195852109453 98-99 0.004895655376934715 100-101 0.005186967101843226 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6178948.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.33365012722894 #Duplication Level Percentage of deduplicated Percentage of total 1 70.23077525929607 28.32663517472494 2 12.789192279224862 10.316696136002264 3 5.559613903470286 6.727185660751443 4 3.01281103077612 4.860706640591201 5 1.8937461550709496 3.819084742420836 6 1.2662446398946545 3.0643360968594 7 0.8830336679984363 2.49311797109288 8 0.6684143281232344 2.1567671720439474 9 0.4948230647762041 1.79622183326099 >10 2.856924414035332 21.48481649473376 >50 0.231597678141465 6.422467065162533 >100 0.10967136237072687 7.4562320637283825 >500 0.002626854643081695 0.6861507982310391 >1k 5.253621785856332E-4 0.3895821503964658 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.2367969434279106E-5 0.0 3 0.0 0.0 0.0 4.855195415141866E-5 0.0 4 0.0 0.0 0.0 6.473593886855821E-5 0.0 5 1.6183984717139553E-5 0.0 0.0 6.473593886855821E-5 0.0 6 1.6183984717139553E-5 0.0 0.0 6.473593886855821E-5 0.0 7 1.6183984717139553E-5 0.0 0.0 8.091992358569776E-5 0.0 8 1.6183984717139553E-5 0.0 0.0 8.091992358569776E-5 0.0 9 1.6183984717139553E-5 0.0 0.0 8.091992358569776E-5 0.0 10-11 1.6183984717139553E-5 0.0 0.0 9.710390830283732E-5 0.0 12-13 2.427597707570933E-5 0.0 0.0 1.4565586245425598E-4 0.0 14-15 3.2367969434279106E-5 0.0 0.0 1.5374785481282575E-4 0.0 16-17 3.2367969434279106E-5 0.0 0.0 1.9420781660567463E-4 0.0 18-19 3.2367969434279106E-5 0.0 0.0 2.670357478328026E-4 0.0 20-21 3.2367969434279106E-5 0.0 0.0 2.9940371726708173E-4 0.0 22-23 3.2367969434279106E-5 0.0 0.0 4.369675873627679E-4 0.0 24-25 3.2367969434279106E-5 0.0 0.0 6.87819350478431E-4 0.0 26-27 3.2367969434279106E-5 0.0 0.0 0.001043867014255501 0.0 28-29 3.2367969434279106E-5 0.0 0.0 0.0031963369816350616 0.0 30-31 3.2367969434279106E-5 0.0 0.0 0.010673337920953534 0.0 32-33 3.2367969434279106E-5 0.0 0.0 0.0271486343630016 0.0 34-35 3.2367969434279106E-5 0.0 0.0 0.04906174967000855 0.0 36-37 4.855195415141866E-5 0.0 0.0 0.08767673720510352 1.6183984717139553E-5 38-39 4.855195415141866E-5 0.0 0.0 0.15416054642311278 1.6183984717139553E-5 40-41 4.855195415141866E-5 0.0 0.0 0.23079980605112715 1.6183984717139553E-5 42-43 4.855195415141866E-5 0.0 0.0 0.30602296701639176 1.6183984717139553E-5 44-45 4.855195415141866E-5 0.0 0.0 0.39805319611040585 1.6183984717139553E-5 46-47 4.855195415141866E-5 0.0 0.0 0.507327460920532 1.6183984717139553E-5 48-49 4.855195415141866E-5 0.0 0.0 0.627347891582839 1.6183984717139553E-5 50-51 4.855195415141866E-5 0.0 8.091992358569776E-6 0.759384930897622 1.6183984717139553E-5 52-53 4.855195415141866E-5 0.0 1.6183984717139553E-5 0.8988827871670064 1.6183984717139553E-5 54-55 4.855195415141866E-5 0.0 1.6183984717139553E-5 1.0573078135630856 1.6183984717139553E-5 56-57 4.855195415141866E-5 0.0 1.6183984717139553E-5 1.2375326673731517 1.6183984717139553E-5 58-59 4.855195415141866E-5 0.0 1.6183984717139553E-5 1.4381088819650205 1.6183984717139553E-5 60-61 5.6643946509988435E-5 0.0 1.6183984717139553E-5 1.6612455712525822 1.6183984717139553E-5 62-63 6.473593886855821E-5 0.0 1.6183984717139553E-5 1.8988507428772663 1.6183984717139553E-5 64-65 6.473593886855821E-5 0.0 1.6183984717139553E-5 2.1466032729195974 1.6183984717139553E-5 66-67 6.473593886855821E-5 0.0 1.6183984717139553E-5 2.4313443000329507 1.6183984717139553E-5 68-69 6.473593886855821E-5 1.6183984717139553E-5 3.2367969434279106E-5 2.7559141135351846 4.045996179284888E-5 70-71 6.473593886855821E-5 1.6183984717139553E-5 3.2367969434279106E-5 3.1200294936937487 4.855195415141866E-5 72-73 6.473593886855821E-5 1.6183984717139553E-5 3.2367969434279106E-5 3.4900115683122754 4.855195415141866E-5 74-75 6.473593886855821E-5 1.6183984717139553E-5 3.2367969434279106E-5 3.873669110016786 4.855195415141866E-5 76-77 6.473593886855821E-5 1.6183984717139553E-5 3.2367969434279106E-5 4.290479544414357 4.855195415141866E-5 78-79 6.473593886855821E-5 2.427597707570933E-5 3.2367969434279106E-5 4.761935203209349 4.855195415141866E-5 80-81 7.282793122712799E-5 3.2367969434279106E-5 3.2367969434279106E-5 5.271229018273013 4.855195415141866E-5 82-83 8.091992358569776E-5 5.6643946509988435E-5 3.2367969434279106E-5 5.80506584616022 4.855195415141866E-5 84-85 8.091992358569776E-5 6.473593886855821E-5 3.2367969434279106E-5 6.3403268647025355 4.855195415141866E-5 86-87 8.091992358569776E-5 6.473593886855821E-5 3.2367969434279106E-5 6.899483536679707 4.855195415141866E-5 88-89 8.091992358569776E-5 7.282793122712799E-5 3.2367969434279106E-5 7.518739435903976 4.855195415141866E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 12900 0.0 38.174236 1 GGTATCA 8060 0.0 37.898296 1 TCAACGC 16925 0.0 28.453983 4 TATCAAC 17165 0.0 28.442583 2 CAACGCA 17320 0.0 27.722574 5 ATCAACG 18095 0.0 26.745419 3 AACGCAG 18630 0.0 26.024769 6 GTACATG 29125 0.0 25.909374 1 TACATGG 30335 0.0 24.6266 2 ACATGGG 31275 0.0 23.310143 3 GTAAGTA 4000 0.0 22.083746 2 CATGGGG 24730 0.0 21.451757 4 TGTAAGT 4090 0.0 21.288618 1 ACGCAGA 22285 0.0 21.244987 7 ATATGTA 2475 0.0 19.992994 1 CGCAGAG 23460 0.0 19.897383 8 ATGGGGG 16110 0.0 19.309723 5 TATGTAA 2760 0.0 18.927938 2 TGGGGGG 12535 0.0 18.903847 6 TAAGTAC 5310 0.0 18.637535 1 >>END_MODULE