##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921569_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6051636 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.11891346406162 31.0 30.0 34.0 26.0 34.0 2 30.102964388472802 31.0 30.0 34.0 26.0 34.0 3 30.29354558007124 31.0 30.0 34.0 26.0 34.0 4 33.940929361911394 35.0 35.0 37.0 30.0 37.0 5 33.45618655847774 35.0 35.0 37.0 28.0 37.0 6 33.35162442023942 35.0 33.0 37.0 28.0 37.0 7 33.16034226116706 35.0 33.0 37.0 27.0 37.0 8 33.05796449092444 35.0 33.0 37.0 26.0 37.0 9 34.38841034060872 38.0 34.0 39.0 27.0 39.0 10-11 34.18702215400926 37.0 34.0 39.0 26.0 39.0 12-13 34.00114836715228 37.0 33.0 39.0 25.0 39.0 14-15 34.878735436169656 38.0 34.0 40.0 25.0 41.0 16-17 34.72861289079515 38.0 33.0 40.0 25.0 41.0 18-19 34.59777116469001 38.0 33.5 40.0 24.5 41.0 20-21 34.45335377078199 38.0 33.0 40.0 23.5 41.0 22-23 34.28778118842574 38.0 33.0 40.0 23.0 41.0 24-25 34.136066181112014 38.0 33.0 40.0 22.0 41.0 26-27 34.051130223298294 38.0 33.0 40.0 21.5 41.0 28-29 34.069032902838174 38.0 33.0 40.0 21.5 41.0 30-31 33.917598150318355 38.0 33.0 40.0 20.0 41.0 32-33 33.74442704419103 38.0 33.0 40.0 19.0 41.0 34-35 33.54743403271446 38.0 32.0 40.0 18.0 41.0 36-37 33.381312921001864 38.0 32.0 40.0 17.5 41.0 38-39 33.20678259564852 38.0 32.0 40.0 16.0 41.0 40-41 33.22425621765751 38.0 32.0 40.0 15.5 41.0 42-43 33.02781454469502 38.0 32.0 40.0 15.0 41.0 44-45 32.82743121033717 37.5 31.0 40.0 13.5 41.0 46-47 32.562086186280865 37.0 31.0 40.0 9.0 41.0 48-49 32.27452262495629 37.0 31.0 40.0 8.5 41.0 50-51 32.00405411032653 37.0 30.5 40.0 7.5 41.0 52-53 31.68866146278461 36.0 30.0 40.0 6.5 41.0 54-55 31.371351399852866 36.0 30.0 39.0 2.0 41.0 56-57 31.026400712138006 35.5 29.0 39.0 2.0 40.0 58-59 30.552249837895076 35.0 28.5 39.0 2.0 40.0 60-61 30.189396883751765 35.0 28.0 38.5 2.0 40.0 62-63 29.84450551883821 34.5 28.0 38.0 2.0 40.0 64-65 29.39739212669103 34.0 27.5 38.0 2.0 40.0 66-67 28.976203624937124 34.0 26.5 37.0 2.0 39.5 68-69 28.543224757734933 34.0 26.0 36.5 2.0 39.0 70-71 28.077824575040534 33.5 26.0 36.0 2.0 39.0 72-73 27.606022569764605 33.0 26.0 35.5 2.0 38.5 74-75 27.08043981825741 33.0 24.5 35.0 2.0 37.5 76-77 25.586466370416197 30.5 22.0 34.0 2.0 36.0 78-79 26.467125501269408 32.0 24.0 35.0 2.0 36.0 80-81 26.51855052088394 33.0 24.0 35.0 2.0 36.0 82-83 26.210691208129504 32.0 23.5 35.0 2.0 36.0 84-85 25.801695855467845 32.0 22.5 35.0 2.0 35.0 86-87 25.3738840207838 32.0 20.0 34.5 2.0 35.0 88-89 24.944679339603375 32.0 19.0 34.0 2.0 35.0 90-91 24.533052054023077 31.0 17.0 34.0 2.0 35.0 92-93 24.130408702704525 31.0 9.5 34.0 2.0 35.0 94-95 23.75937168064966 31.0 4.5 34.0 2.0 35.0 96-97 23.244548746818218 31.0 2.0 34.0 2.0 35.0 98-99 22.515046096625774 31.0 2.0 34.0 2.0 35.0 100-101 19.944586885265405 27.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 154272.0 3 72189.0 4 38172.0 5 27465.0 6 23248.0 7 23002.0 8 26057.0 9 29896.0 10 34003.0 11 37341.0 12 41678.0 13 45417.0 14 49154.0 15 52111.0 16 54647.0 17 56915.0 18 56483.0 19 55443.0 20 55473.0 21 57882.0 22 62338.0 23 70061.0 24 80974.0 25 94426.0 26 111393.0 27 131866.0 28 154793.0 29 182757.0 30 213440.0 31 254463.0 32 302254.0 33 368635.0 34 462979.0 35 586681.0 36 759007.0 37 820414.0 38 384229.0 39 20078.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.993424340574634 17.85893838947033 12.669657098642679 25.47798017131236 2 16.451022500361887 19.5100795883956 37.52770325247586 26.511194658766655 3 21.072362676621896 22.383844479535096 27.84019440719093 28.70359843665209 4 14.707933619158647 14.627514261792937 33.93620857601547 36.72834354303295 5 15.230914110356444 36.64787639274339 33.025371827943054 15.09583766895711 6 36.04608462025298 32.90029268951125 16.01250158387141 15.041121106364367 7 31.44164546166669 30.63466407738973 18.715087866305414 19.208602594638172 8 28.449348737326265 34.260716243304 18.417037158646476 18.872897860723263 9 27.580027963550773 15.682532970985003 18.193942377616455 38.543496687847764 10-11 27.324263544999777 24.66944540813634 25.813269102648157 22.193021944215722 12-13 27.32790977660991 21.374027430829557 26.49992863015718 24.79813416240336 14-15 24.351316260537594 23.139976719516497 23.714386915282994 28.794320104662912 16-17 24.862908087337654 26.4533586536761 24.3985447086693 24.285188550316946 18-19 24.83923080828368 25.966719491558077 25.638996246582824 23.555053453575418 20-21 25.167398480468194 24.94272078660918 25.790253093275922 24.099627639646705 22-23 25.090378381954093 24.59289210822253 25.571004498247007 24.745725011576372 24-25 24.87109782625142 24.805176046209574 25.539030232986736 24.78469589455227 26-27 24.64451998832123 25.02424535205111 25.74966330951618 24.58157135011148 28-29 24.605377687349996 25.452745603442228 25.481858897458153 24.460017811749623 30-31 25.077515112926267 25.043348626431204 25.339053203186623 24.540083057455895 32-33 24.7922776532363 25.09873454800811 25.35960766376148 24.74938013499411 34-35 24.92974325695209 25.118301370121177 25.591308472790868 24.360646900135862 36-37 24.904855096912005 25.109220546571372 25.640524430539795 24.345399925976828 38-39 24.925562028997582 25.24970525671264 25.45750506006283 24.367227654226948 40-41 24.99005633161483 25.054449486867043 25.446378360197556 24.509115821320567 42-43 24.680261343225098 24.9866626620905 25.38585300819679 24.947222986487613 44-45 24.506632633751323 24.979551658650124 25.62756864469765 24.8862470629009 46-47 24.643025920322444 24.94149815308219 25.51846678134797 24.897009145247395 48-49 24.502574932476705 25.07568640767795 25.564597219089453 24.857141440755896 50-51 24.454501642312664 25.07159603967465 25.699895911390147 24.774006406622533 52-53 24.566194266867257 25.07799170220345 25.510018840299846 24.845795190629445 54-55 24.114053690320137 24.85982190380419 25.855548530548134 25.17057587532754 56-57 24.44045444362997 24.972684084234906 25.573630099490835 25.01323137264429 58-59 24.546450977192304 24.973040192856303 25.664059030223658 24.81644979972774 60-61 24.77527609786641 24.958266918820048 25.665146550514343 24.6013104327992 62-63 24.480626308345073 24.89880093141072 25.709930461508407 24.910642298735798 64-65 24.203359169112357 24.813445600915713 25.78006446108949 25.20313076888244 66-67 24.35070241488728 24.92282583634175 25.470586518683625 25.255885230087344 68-69 24.124246579816546 24.90802268725481 25.605582596019598 25.362148136909042 70-71 24.25450106134125 24.7403633578204 25.553103717541646 25.452031863296703 72-73 24.14227531113259 24.92108638569033 25.4586678165051 25.477970486671982 74-75 23.802636992135742 24.994968029733386 25.600970172133476 25.601424805997397 76-77 23.88580539348642 24.59206689034775 25.693471795001738 25.828655921164096 78-79 23.868533360058027 24.523734868547916 25.827936301295786 25.77979547009828 80-81 23.94112971340227 24.7151942222487 25.592751598854903 25.75092446549413 82-83 23.827771170025052 24.729923600716777 25.685712033420078 25.75659319583809 84-85 23.816188320643196 24.627181994292556 25.575998230132523 25.980631454931725 86-87 23.441236542034012 24.791784130898222 25.670435895899352 26.096543431168417 88-89 23.38744946802974 24.568003024972025 25.75452823101258 26.290019275985653 90-91 23.589090714162207 24.297949548128074 25.819447920785976 26.293511816923743 92-93 23.70237058503672 24.336627168101067 25.697553406578326 26.263448840283882 94-95 23.492831161710473 24.264284074197427 25.759978491295595 26.4829062727965 96-97 23.084308670816256 24.154676988667607 25.97174664573116 26.78926769478498 98-99 22.97916526201817 24.108973621692797 25.93609080705484 26.975770309234193 100-101 23.312502086319594 23.87730391653003 25.898489025380556 26.911704971769822 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 154.0 1 128.5 2 130.5 3 197.0 4 196.0 5 196.5 6 367.0 7 686.5 8 1042.0 9 1172.0 10 1005.0 11 862.0 12 894.0 13 988.0 14 1069.5 15 1155.0 16 1259.5 17 1363.0 18 1482.5 19 1626.0 20 1785.0 21 1950.5 22 2202.5 23 2482.5 24 2785.0 25 3240.5 26 3994.0 27 5060.5 28 6425.5 29 8792.0 30 12860.0 31 18531.5 32 26557.5 33 36507.0 34 47373.0 35 59201.5 36 74253.0 37 89194.0 38 101325.0 39 114266.5 40 127943.5 41 140635.5 42 153498.0 43 170744.0 44 189388.0 45 208140.0 46 226457.0 47 245555.5 48 265718.5 49 278209.0 50 285691.0 51 291694.5 52 294896.0 53 296882.0 54 294504.0 55 285005.0 56 268594.5 57 247703.5 58 224239.5 59 197279.0 60 168092.0 61 139157.5 62 111287.0 63 85146.5 64 62241.0 65 44469.5 66 32034.0 67 23484.0 68 17285.5 69 12323.5 70 8660.0 71 6188.0 72 4459.0 73 3260.0 74 2294.5 75 1502.0 76 1018.5 77 609.0 78 305.5 79 152.5 80 84.0 81 50.5 82 29.5 83 20.0 84 9.5 85 2.5 86 1.0 87 1.5 88 2.0 89 1.0 90 0.5 91 0.5 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.24500812672804512 2 0.0 3 1.3219565750484662E-4 4 0.014111886438642376 5 0.01632616370184856 6 0.10446761834320503 7 0.13632677180187308 8 0.15235549527433573 9 0.109458004414013 10-11 0.1185299314102831 12-13 0.09361104997061952 14-15 0.11712535254929411 16-17 0.07146001510996365 18-19 0.07622732100873218 20-21 0.05277911625881001 22-23 0.07991227496167978 24-25 0.07134434390964692 26-27 0.05046569225247519 28-29 0.018763521137094168 30-31 0.03053719688361957 32-33 0.03858460753422711 34-35 0.04250916611640224 36-37 0.036006792212882596 38-39 0.03807234936139583 40-41 0.021539629944695948 42-43 0.031239486314114065 44-45 0.016904519703432264 46-47 0.03019018328266935 48-49 3.470136009502224E-4 50-51 0.016887995246244156 52-53 0.008452259851716132 54-55 0.01701192867515495 56-57 0.011178795287753594 58-59 0.008237441908270755 60-61 0.03104945505645085 62-63 0.013459170379712197 64-65 0.014111886438642376 66-67 0.05726550638538075 68-69 0.07648345009514783 70-71 0.032710163003855486 72-73 0.053704485861343944 74-75 0.04647503584154764 76-77 0.2243195063285366 78-79 0.07921824775977933 80-81 0.016152656901373446 82-83 0.010955715115714163 84-85 0.02421659200916909 86-87 0.17829889305966187 88-89 0.382549446133244 90-91 0.2775365207028314 92-93 0.2772060315590693 94-95 0.0021894905774240223 96-97 0.0058579200731835165 98-99 0.004957337156431749 100-101 0.005122581728312807 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6051636.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.33385244908441 #Duplication Level Percentage of deduplicated Percentage of total 1 72.0124118756835 34.80637290101979 2 13.424600007483722 12.977252718993912 3 5.46495777459196 7.924273881528135 4 2.734256105309546 5.286285246081592 5 1.5966592742486327 3.8586346886497807 6 1.0265924822684565 2.977150173798172 7 0.7176639530388833 2.428122452994562 8 0.49481353757176744 1.9132995611842631 9 0.35742709869615713 1.5548245784715946 >10 1.9899127868421973 17.310860994838915 >50 0.12760561571339396 4.2144106837328765 >100 0.05179268959847192 4.12355686960931 >500 9.629113707640788E-4 0.29723087514179847 >1k 3.438875826190982E-4 0.32772437395537574 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 1.6524457188105828E-5 0.0 7 0.0 0.0 0.0 1.6524457188105828E-5 0.0 8 0.0 0.0 0.0 1.6524457188105828E-5 0.0 9 0.0 0.0 0.0 6.609782875242331E-5 3.3048914376211655E-5 10-11 0.0 0.0 0.0 6.609782875242331E-5 3.3048914376211655E-5 12-13 0.0 8.262228594052914E-6 0.0 6.609782875242331E-5 3.3048914376211655E-5 14-15 0.0 1.6524457188105828E-5 0.0 8.262228594052914E-5 5.78356001583704E-5 16-17 0.0 1.6524457188105828E-5 0.0 1.4045788609889952E-4 8.262228594052914E-5 18-19 0.0 1.6524457188105828E-5 0.0 1.5698234328700539E-4 9.914674312863497E-5 20-21 0.0 1.6524457188105828E-5 0.0 2.0655571485132286E-4 1.156712003167408E-4 22-23 0.0 1.6524457188105828E-5 0.0 3.057024579799578E-4 1.3219565750484662E-4 24-25 0.0 3.3048914376211655E-5 0.0 4.874714870491219E-4 1.5698234328700539E-4 26-27 0.0 4.957337156431748E-5 0.0 0.0010906141744149846 1.817690290691641E-4 28-29 1.6524457188105828E-5 4.957337156431748E-5 0.0 0.004775568127362584 1.817690290691641E-4 30-31 1.6524457188105828E-5 4.957337156431748E-5 0.0 0.017962084963471035 1.90031257663217E-4 32-33 1.6524457188105828E-5 4.957337156431748E-5 0.0 0.04502914583758838 2.313424006334816E-4 34-35 1.6524457188105828E-5 6.609782875242331E-5 0.0 0.0818043253097179 2.6439131500969324E-4 36-37 1.6524457188105828E-5 9.914674312863497E-5 0.0 0.14495253845406433 2.6439131500969324E-4 38-39 1.6524457188105828E-5 1.652445718810583E-4 0.0 0.2474454841632907 2.6439131500969324E-4 40-41 1.6524457188105828E-5 2.0655571485132286E-4 0.0 0.36387680951068435 2.6439131500969324E-4 42-43 1.6524457188105828E-5 2.1481794344537576E-4 0.0 0.47726763473546663 2.6439131500969324E-4 44-45 1.6524457188105828E-5 2.1481794344537576E-4 0.0 0.6117932407038361 2.6439131500969324E-4 46-47 1.6524457188105828E-5 2.313424006334816E-4 0.0 0.7761454918967368 2.809157721977991E-4 48-49 1.6524457188105828E-5 2.4786685782158743E-4 0.0 0.9541304202698246 2.974402293859049E-4 50-51 1.6524457188105828E-5 2.6439131500969324E-4 0.0 1.1463181195960894 2.974402293859049E-4 52-53 1.6524457188105828E-5 2.809157721977991E-4 0.0 1.341133207615263 3.1396468657401077E-4 54-55 2.478668578215874E-5 2.974402293859049E-4 0.0 1.560222723243764 3.552758295442753E-4 56-57 3.3048914376211655E-5 3.139646865740107E-4 0.0 1.814691101712 3.7180028673238115E-4 58-59 3.3048914376211655E-5 3.139646865740107E-4 0.0 2.0937065613331667 3.8832474392048696E-4 60-61 3.3048914376211655E-5 3.470136009502224E-4 0.0 2.4023668971497956 3.9658697251453986E-4 62-63 3.3048914376211655E-5 3.635380581383282E-4 0.0 2.7193142482462593 3.9658697251453986E-4 64-65 3.3048914376211655E-5 3.635380581383282E-4 0.0 3.04544919753931 3.9658697251453986E-4 66-67 3.3048914376211655E-5 3.8006251532643405E-4 0.0 3.4153161227806828 3.9658697251453986E-4 68-69 3.3048914376211655E-5 3.8006251532643405E-4 0.0 3.8319803107787713 3.9658697251453986E-4 70-71 3.3048914376211655E-5 3.8006251532643405E-4 0.0 4.2893359746025705 4.131114297026457E-4 72-73 3.3048914376211655E-5 3.8006251532643405E-4 0.0 4.755796614337015 4.2963588689075153E-4 74-75 3.3048914376211655E-5 3.8006251532643405E-4 0.0 5.234551450219412 4.2963588689075153E-4 76-77 3.3048914376211655E-5 3.8006251532643405E-4 0.0 5.75167607569259 4.2963588689075153E-4 78-79 3.3048914376211655E-5 3.8006251532643405E-4 0.0 6.335369476948052 4.2963588689075153E-4 80-81 3.3048914376211655E-5 3.8006251532643405E-4 0.0 6.964282055298765 4.2963588689075153E-4 82-83 3.3048914376211655E-5 3.965869725145399E-4 0.0 7.595921169085516 4.2963588689075153E-4 84-85 3.3048914376211655E-5 4.131114297026457E-4 0.0 8.235368088893647 4.2963588689075153E-4 86-87 4.131114297026457E-5 4.131114297026457E-4 0.0 8.91367226977961 4.2963588689075153E-4 88-89 4.957337156431748E-5 4.131114297026457E-4 0.0 9.641508511086919 4.544225726729103E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATG 22390 0.0 28.03703 1 GTATCAA 14460 0.0 26.692783 1 TACATGG 23865 0.0 25.966175 2 ACATGGG 24590 0.0 24.621887 3 GGTATCA 10635 0.0 22.733564 1 GAGTACA 17810 0.0 22.687418 1 TCAACGC 16680 0.0 22.60446 4 AGTACAT 16750 0.0 22.59448 2 CAACGCA 16835 0.0 22.424362 5 CATGGGG 19155 0.0 22.237192 4 TATCAAC 17365 0.0 21.985693 2 ATCAACG 17680 0.0 21.406504 3 AACGCAG 17920 0.0 21.222294 6 GTATAGG 1375 0.0 20.767769 1 GTAAGTA 2780 0.0 19.130754 2 ATGGGGG 11125 0.0 18.951736 5 ACGCAGA 21400 0.0 17.349653 7 AGAGTAC 16025 0.0 17.275738 5 GTACACT 5170 0.0 16.80855 4 TACACTG 7460 0.0 16.804716 5 >>END_MODULE