##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921568_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5097491 Sequences flagged as poor quality 0 Sequence length 98 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.335604123675747 31.0 28.0 33.0 16.0 34.0 2 28.306016038086188 31.0 28.0 33.0 16.0 34.0 3 28.394122912625054 31.0 28.0 34.0 16.0 34.0 4 31.833850417783964 35.0 32.0 37.0 19.0 37.0 5 31.781192943744283 35.0 32.0 37.0 19.0 37.0 6 31.883520932160547 35.0 32.0 37.0 19.0 37.0 7 31.694375527097545 35.0 32.0 37.0 18.0 37.0 8 31.645942091903645 35.0 32.0 37.0 18.0 37.0 9 32.8953008450628 37.0 32.0 39.0 17.0 39.0 10-11 32.681756377794486 37.0 32.0 39.0 17.0 39.0 12-13 32.499282293975604 37.0 32.0 39.0 17.0 39.0 14-15 33.234158432060006 38.0 32.0 40.0 16.0 41.0 16-17 33.100255105894256 38.0 32.0 40.0 15.0 41.0 18-19 32.934515431219005 38.0 32.0 40.0 11.0 41.0 20-21 32.808543261773295 38.0 32.0 40.0 10.0 41.0 22-23 32.59473699904522 37.5 31.0 40.0 10.0 41.0 24-25 32.694522756391336 38.0 31.5 40.0 10.0 41.0 26-27 32.46475432717782 38.0 31.0 40.0 9.0 41.0 28-29 32.27737930287665 37.0 31.0 40.0 8.0 41.0 30-31 32.03339397754699 37.0 30.0 40.0 8.0 41.0 32-33 31.79886958113315 37.0 30.0 40.0 2.0 41.0 34-35 31.46544898264656 37.0 30.0 40.0 2.0 41.0 36-37 31.170904862804072 37.0 30.0 40.0 2.0 41.0 38-39 30.957188938636676 36.0 29.5 40.0 2.0 41.0 40-41 30.736114982841556 36.0 29.0 39.0 2.0 41.0 42-43 30.486371530621632 36.0 28.0 39.0 2.0 40.0 44-45 30.223633057910256 35.5 28.0 39.0 2.0 40.0 46-47 29.92446372146611 35.0 27.0 39.0 2.0 40.0 48-49 29.631603174973726 35.0 27.0 39.0 2.0 40.0 50-51 28.67020961881051 34.0 25.0 38.0 2.0 39.5 52-53 28.85875237445245 34.5 26.0 38.0 2.0 39.5 54-55 29.44270926618605 35.0 27.0 39.0 2.0 40.0 56-57 29.42181045537893 35.0 27.0 39.0 2.0 40.0 58-59 29.1747501859248 35.0 26.0 39.0 2.0 40.0 60-61 28.825621859852227 34.0 26.0 38.0 2.0 40.0 62-63 28.401241905086245 34.0 26.0 38.0 2.0 40.0 64-65 27.93288590406535 34.0 25.0 37.5 2.0 40.0 66-67 27.58499642274994 34.0 24.0 37.0 2.0 39.5 68-69 27.121354603666784 33.0 22.5 36.0 2.0 39.0 70-71 26.697289803944727 33.0 22.0 36.0 2.0 39.0 72-73 26.220166548602045 32.5 20.5 35.0 2.0 38.0 74-75 25.776218339571372 32.0 20.0 35.0 2.0 37.0 76-77 25.352675855631723 32.0 18.0 35.0 2.0 37.0 78-79 24.960957655442648 32.0 16.0 35.0 2.0 36.0 80-81 24.519081740409156 31.0 10.0 35.0 2.0 36.0 82-83 23.979228800992487 31.0 6.0 34.0 2.0 35.0 84-85 23.567129593755045 31.0 2.0 34.0 2.0 35.0 86-87 23.07391606968997 30.5 2.0 34.0 2.0 35.0 88-89 22.5613626389924 30.0 2.0 34.0 2.0 35.0 90-91 21.969383369190844 29.5 2.0 34.0 2.0 35.0 92-93 21.42317514636122 29.0 2.0 34.0 2.0 35.0 94-95 20.739058195492646 29.0 2.0 34.0 2.0 35.0 96-97 20.093642244782778 29.0 2.0 34.0 2.0 35.0 98 19.612399511838277 27.0 2.0 34.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 297386.0 3 49544.0 4 35801.0 5 29438.0 6 27224.0 7 28233.0 8 32329.0 9 37104.0 10 38614.0 11 41091.0 12 41293.0 13 41009.0 14 40045.0 15 42012.0 16 45460.0 17 48623.0 18 50798.0 19 50117.0 20 51793.0 21 55667.0 22 59860.0 23 66975.0 24 76574.0 25 88249.0 26 100979.0 27 116617.0 28 135093.0 29 155233.0 30 180326.0 31 210577.0 32 249071.0 33 301828.0 34 371837.0 35 461826.0 36 568280.0 37 575842.0 38 274823.0 39 19920.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.62532697883072 17.57386381190263 12.959174898573348 24.8416343106933 2 16.454297046603173 19.36162195168912 38.55687416648133 25.627206835226374 3 20.186621375112107 22.995863445570073 28.016958792609408 28.800556386708408 4 14.0633076039494 14.931097232396825 34.84668552217762 36.15890964147615 5 15.20756319656084 36.59907994152297 32.84826421370124 15.345092648214944 6 34.573651474678165 33.23084743700208 16.856120007615296 15.339381080704454 7 30.847201634856532 30.921777343232538 19.518719778439493 18.712301243471437 8 27.851535077478847 33.32114254859865 19.340398756382996 19.486923617539503 9 27.781664649112308 15.794095661506043 18.763392865901633 37.660846823480014 10-11 26.68301428214242 24.65874867664846 26.30245599724329 22.355781043965823 12-13 27.023975244222093 22.007312512758347 26.518840368452707 24.449871874566853 14-15 24.544425486254998 23.515729253249308 23.938300788804778 28.001544471690913 16-17 24.54856743529134 26.504715541644035 24.698534048885705 24.248182974178924 18-19 24.524042134642627 25.862852886464438 26.178779288723973 23.434325690168958 20-21 25.22795069276018 25.00053757903271 25.871886914187364 23.899624814019745 22-23 25.262511505221756 24.570646823714377 25.64055635099042 24.526285320073452 24-25 24.736900332671734 24.98771218265307 25.620405934316352 24.654981550358848 26-27 24.496076633638076 25.137622406703773 25.865924316094713 24.500376643563442 28-29 24.570468348157164 25.239786836942596 25.776838259373264 24.41290655552698 30-31 24.958265387273155 25.049131738440384 25.51201412001839 24.480588754268073 32-33 24.715079541286034 25.19143740991765 25.35529886565529 24.73818418314103 34-35 24.93598155788624 25.143844058839594 25.61016186054751 24.310012522726655 36-37 24.953562542999467 24.959088935315403 25.52490876034647 24.56243976133866 38-39 24.894079177950232 25.115763730414013 25.448128069877068 24.542029021758687 40-41 24.87217558813213 24.986208690819232 25.51571421453152 24.62590150651712 42-43 24.783995271346278 24.835532792630737 25.393368622342493 24.98710331368049 44-45 24.476424253006996 24.95618372067981 25.65936044276343 24.908031583549764 46-47 24.835329946960076 24.8420333949834 25.443680159496786 24.87895649855974 48-49 24.56365648600701 25.0174907496868 25.31979429224769 25.099058472058505 50-51 24.499338994296878 25.060123417260204 25.50630595798876 24.93423163045416 52-53 24.60940342824684 25.039148042479702 25.553673613308437 24.797774915965025 54-55 24.25973737995758 24.787076739416904 25.827635571834236 25.125550308791283 56-57 24.455122809401033 24.84635657403661 25.608337000534576 25.090183616027783 58-59 24.437006855644068 24.738636690235364 25.795694483869962 25.02866197025061 60-61 24.72368485943343 24.718782696467223 25.676171186287018 24.88136125781233 62-63 24.450211469620843 24.675796783630048 25.863286853919114 25.01070489282999 64-65 24.259972403689815 24.475889163845586 25.945808644251265 25.318329788213333 66-67 24.345368898246292 24.790312725109835 25.64730941582597 25.2170089608179 68-69 24.303248153638247 24.61602398574746 25.669775853666387 25.410952006947905 70-71 24.19596573663056 24.53668440769489 25.875281791847787 25.392068063826763 72-73 24.337214898037715 24.646871608271667 25.637572363020546 25.378341130670073 74-75 24.131687197456227 24.79387722135968 25.7925335989229 25.281901982261196 76-77 24.085854091213797 24.478869786459732 25.94978875000566 25.485487372320808 78-79 24.054425797895103 24.433226124146863 25.970161148295983 25.542186929662048 80-81 24.238123143960717 24.726400368632877 25.643073618263696 25.392402869142707 82-83 24.265017681055447 24.552621382988917 25.77159197188977 25.410768964065873 84-85 24.194406186053833 24.55954863843853 25.711081378876123 25.53496379663151 86-87 24.01273588975188 24.673661516165453 25.92055179149358 25.393050802589084 88-89 24.053589874940297 24.31276399322776 25.949726184054462 25.683919947777483 90-91 24.242055462689347 24.240264928261055 25.98362566103432 25.534053948015277 92-93 24.34882749354914 24.325297389722557 25.88437334523217 25.441501771496135 94-95 24.2735803761526 24.193985415133472 25.965391441918307 25.567042766795616 96-97 24.230385452189932 24.08674282874041 25.99663876261128 25.686232956458376 98 24.133652992098124 24.05392195252107 25.925830456233918 25.886594599146882 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 257.0 1 221.0 2 270.5 3 380.0 4 401.5 5 478.0 6 730.0 7 1324.5 8 1909.0 9 2055.0 10 1953.5 11 1936.5 12 2061.0 13 2291.0 14 2527.5 15 2712.5 16 2838.0 17 2880.5 18 2850.0 19 2794.0 20 2780.0 21 2708.5 22 2750.0 23 2958.5 24 3128.0 25 3564.5 26 4349.5 27 5204.5 28 6157.5 29 7920.0 30 10957.0 31 16319.5 32 25552.0 33 36457.5 34 48248.5 35 62008.0 36 76363.5 37 89993.0 38 102837.0 39 113096.0 40 122800.0 41 134002.0 42 147946.0 43 166008.5 44 180916.0 45 193666.5 46 207794.0 47 222551.5 48 234810.0 49 239476.5 50 239899.0 51 240644.0 52 243282.5 53 246805.0 54 246039.0 55 238894.5 56 224233.5 57 204228.0 58 183964.0 59 162883.5 60 140046.5 61 115652.5 62 92394.0 63 70801.0 64 51614.0 65 37085.5 66 26614.5 67 19208.5 68 13758.0 69 9771.5 70 6884.0 71 4852.5 72 3519.5 73 2608.5 74 1957.5 75 1388.5 76 884.5 77 502.0 78 294.5 79 179.0 80 117.5 81 72.5 82 41.5 83 29.0 84 24.5 85 27.0 86 18.5 87 8.5 88 8.5 89 12.5 90 13.0 91 8.5 92 8.5 93 10.5 94 10.0 95 7.0 96 5.5 97 6.0 98 4.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.30877935831568903 2 0.14954415809660085 3 0.147248911278117 4 0.14128519304889406 5 0.13624349704589964 6 0.04867100304836242 7 0.039195753361800936 8 0.014615033160431277 9 0.011005414232217379 10-11 0.0021873506005209227 12-13 0.006620904284087995 14-15 0.011819540240483014 16-17 0.00699363667341443 18-19 0.051662670910061444 20-21 0.10233465836428156 22-23 0.10275643448904569 24-25 0.07908792776681704 26-27 0.0878765651572509 28-29 0.10829837659350453 30-31 0.08428656372321207 32-33 0.02182446226977154 34-35 0.3281712513077512 36-37 0.4285833952428754 38-39 0.39689133340304084 40-41 0.39270299839666223 42-43 0.36619976376613517 44-45 0.34836746156099146 46-47 0.35341896631107345 48-49 0.34650379961435934 50-51 0.347847597965352 52-53 0.3980291480651952 54-55 0.3834533498931141 56-57 0.3665724961554616 58-59 0.3450521050454037 60-61 0.35508645331595484 62-63 0.35386035993001264 64-65 0.3710354760802913 66-67 0.3944783816195065 68-69 0.35261464904989537 70-71 0.32590543073052997 72-73 0.3086714620977261 74-75 0.2935169478474803 76-77 0.2966949819038425 78-79 0.30458121456222287 80-81 0.29284014429844013 82-83 0.30403192472532076 84-85 0.296047604596065 86-87 0.29125112727025904 88-89 0.31697947088087064 90-91 0.2983722776558115 92-93 0.2872099234701935 94-95 0.3042869521495967 96-97 0.3027764050981159 98 0.30220749776703876 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 5097491.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.93061958022135 #Duplication Level Percentage of deduplicated Percentage of total 1 73.96189468425726 31.012680694379867 2 10.997261682265865 9.222439920464701 3 4.778119563311362 6.010485411540663 4 2.655470764133752 4.453821376691682 5 1.655387411277059 3.4705709900072894 6 1.138254374370649 2.863662669435512 7 0.7787009454979028 2.2855989178701868 8 0.5749743949637361 1.9287226098873886 9 0.4437950454356814 1.6747741099575542 >10 2.6739723698097513 21.06158080506448 >50 0.22434294038107255 6.487647007805464 >100 0.11408703402436829 8.325194724909366 >500 0.0033128526369928667 0.8723940824743475 >1k 4.259376348750327E-4 0.3304266795115416 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 3.923498835015108E-5 9 0.0 0.0 0.0 3.923498835015108E-5 5.885248252522663E-5 10-11 0.0 0.0 0.0 3.923498835015108E-5 5.885248252522663E-5 12-13 0.0 0.0 0.0 5.885248252522663E-5 5.885248252522663E-5 14-15 0.0 0.0 0.0 6.86612296127644E-5 1.4713120631306656E-4 16-17 0.0 0.0 0.0 1.1770496505045326E-4 1.7655744757567987E-4 18-19 0.0 0.0 0.0 1.1770496505045326E-4 1.7655744757567987E-4 20-21 0.0 0.0 0.0 1.373224592255288E-4 1.7655744757567987E-4 22-23 0.0 0.0 0.0 2.746449184510576E-4 2.354099301009065E-4 24-25 0.0 0.0 0.0 7.650822728279462E-4 2.746449184510576E-4 26-27 0.0 0.0 0.0 0.0020304106471203186 3.727323893264353E-4 28-29 0.0 0.0 0.0 0.007356560315653328 3.727323893264353E-4 30-31 9.80874708753777E-6 0.0 0.0 0.027121185697041937 4.0215863058904865E-4 32-33 1.961749417507554E-5 0.0 0.0 0.07087800645454793 4.806286072893508E-4 34-35 1.961749417507554E-5 9.80874708753777E-6 0.0 0.1310644785836797 5.492898369021152E-4 36-37 1.961749417507554E-5 1.961749417507554E-5 0.0 0.2265820577221225 5.492898369021152E-4 38-39 1.961749417507554E-5 1.961749417507554E-5 0.0 0.37482165245608084 5.492898369021152E-4 40-41 1.961749417507554E-5 1.961749417507554E-5 0.0 0.5359597496101514 5.689073310771907E-4 42-43 1.961749417507554E-5 3.923498835015108E-5 0.0 0.7044838333211378 5.885248252522663E-4 44-45 1.961749417507554E-5 3.923498835015108E-5 0.0 0.9030226831199898 6.081423194273418E-4 46-47 1.961749417507554E-5 3.923498835015108E-5 0.0 1.1383639519912836 6.375685606899551E-4 48-49 1.961749417507554E-5 3.923498835015108E-5 0.0 1.3860053897103497 6.86612296127644E-4 50-51 1.961749417507554E-5 3.923498835015108E-5 0.0 1.652587518055451 6.86612296127644E-4 52-53 1.961749417507554E-5 3.923498835015108E-5 1.961749417507554E-5 1.9237895662787832 7.454647786528706E-4 54-55 3.923498835015108E-5 5.885248252522663E-5 1.961749417507554E-5 2.230999525060466 8.239347553531727E-4 56-57 3.923498835015108E-5 5.885248252522663E-5 1.961749417507554E-5 2.5790923417030065 8.53360996615786E-4 58-59 3.923498835015108E-5 5.885248252522663E-5 1.961749417507554E-5 2.960201401042199 8.631697437033239E-4 60-61 3.923498835015108E-5 7.846997670030216E-5 1.961749417507554E-5 3.364625852208469 8.827872378783994E-4 62-63 3.923498835015108E-5 7.846997670030216E-5 1.961749417507554E-5 3.7772504159399203 8.827872378783994E-4 64-65 5.885248252522663E-5 7.846997670030216E-5 1.961749417507554E-5 4.23047338386669 8.827872378783994E-4 66-67 7.846997670030216E-5 7.846997670030216E-5 1.961749417507554E-5 4.737507138315692 9.02404732053475E-4 68-69 7.846997670030216E-5 9.808747087537771E-5 1.961749417507554E-5 5.297920094415076 9.220222262285505E-4 70-71 7.846997670030216E-5 9.808747087537771E-5 1.961749417507554E-5 5.903051128486544 9.612572145787016E-4 72-73 7.846997670030216E-5 1.1770496505045326E-4 1.961749417507554E-5 6.525180721260714 9.80874708753777E-4 74-75 7.846997670030216E-5 1.1770496505045326E-4 1.961749417507554E-5 7.163112205592908 9.80874708753777E-4 76-77 7.846997670030216E-5 1.1770496505045326E-4 1.961749417507554E-5 7.858915297741575 9.906834558413148E-4 78-79 7.846997670030216E-5 1.1770496505045326E-4 1.961749417507554E-5 8.623340384514655 0.0010004922029288527 80-81 7.846997670030216E-5 1.1770496505045326E-4 2.942624126261331E-5 9.437682185216218 0.001029918444191466 82-83 7.846997670030216E-5 1.1770496505045326E-4 3.923498835015108E-5 10.268129948635515 0.0011378146621543815 84-85 7.846997670030216E-5 1.1770496505045326E-4 3.923498835015108E-5 11.11201569556474 0.0011378146621543815 86 7.846997670030216E-5 1.1770496505045326E-4 3.923498835015108E-5 11.762551419904419 0.0011378146621543815 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 11035 0.0 42.74621 1 GGTATCA 6070 0.0 39.878895 1 TCAACGC 14405 0.0 32.40413 4 TATCAAC 14635 0.0 31.644354 2 CAACGCA 14975 0.0 31.078066 5 ATCAACG 15455 0.0 30.17289 3 AACGCAG 15610 0.0 29.867788 6 GTACATG 23175 0.0 27.065886 1 TACATGG 24775 0.0 25.035053 2 ACGCAGA 18480 0.0 24.626495 7 ACATGGG 25930 0.0 23.706831 3 CGCAGAG 19160 0.0 23.246468 8 CATGGGG 18910 0.0 21.355867 4 GCAGAGT 19960 0.0 20.81913 9 GAGTACA 17770 0.0 19.915215 1 AGTACAT 16905 0.0 19.486435 2 GTATAGG 1355 0.0 19.019314 1 ATGGGGG 9745 0.0 18.669157 5 ATATGTA 1340 0.0 17.858486 1 AGAGTAC 17380 0.0 17.74812 10-11 >>END_MODULE