##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921567_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8718444 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.053079540339997 31.0 30.0 34.0 26.0 34.0 2 30.039937172275238 31.0 30.0 34.0 26.0 34.0 3 30.222651427250092 31.0 30.0 34.0 26.0 34.0 4 33.87272958339814 35.0 35.0 37.0 30.0 37.0 5 33.38215592140065 35.0 33.0 37.0 28.0 37.0 6 33.276431666017466 35.0 33.0 37.0 27.0 37.0 7 33.089252508819236 35.0 33.0 37.0 26.0 37.0 8 32.98574676857476 35.0 33.0 37.0 26.0 37.0 9 34.30714276538336 37.0 34.0 39.0 27.0 39.0 10-11 34.10097271944397 37.0 33.5 39.0 26.0 39.0 12-13 33.922678404540996 37.0 33.0 39.0 25.0 39.0 14-15 34.79497448168503 38.0 33.0 40.0 25.0 41.0 16-17 34.64404192995906 38.0 33.0 40.0 25.0 41.0 18-19 34.50830039167539 38.0 33.0 40.0 24.0 41.0 20-21 34.36781660810117 38.0 33.0 40.0 23.5 41.0 22-23 34.19628187093936 38.0 33.0 40.0 22.5 41.0 24-25 34.04161826353418 38.0 33.0 40.0 21.5 41.0 26-27 33.95525629343952 38.0 32.5 40.0 20.5 41.0 28-29 33.97188236800053 38.0 33.0 40.0 20.5 41.0 30-31 33.82320841884171 38.0 33.0 40.0 19.0 41.0 32-33 33.65411890011566 38.0 32.0 40.0 18.5 41.0 34-35 33.45431203090827 38.0 32.0 40.0 18.0 41.0 36-37 33.28674428602168 38.0 32.0 40.0 16.0 41.0 38-39 33.10470153848554 38.0 32.0 40.0 16.0 41.0 40-41 33.12153097502261 38.0 32.0 40.0 15.5 41.0 42-43 32.922170114300215 38.0 31.5 40.0 14.5 41.0 44-45 32.718520644280105 37.0 31.0 40.0 12.0 41.0 46-47 32.459500456732876 37.0 31.0 40.0 9.0 41.0 48-49 32.169154725315664 37.0 30.5 40.0 8.5 41.0 50-51 31.898748503746766 37.0 30.0 40.0 7.5 41.0 52-53 31.57187417846579 36.0 30.0 39.5 4.0 41.0 54-55 31.252036946042207 36.0 29.5 39.0 2.0 40.5 56-57 30.909478457394464 35.5 29.0 39.0 2.0 40.0 58-59 30.435392198424395 35.0 28.0 39.0 2.0 40.0 60-61 30.08313989285244 35.0 28.0 38.5 2.0 40.0 62-63 29.749201463013357 34.5 28.0 38.0 2.0 40.0 64-65 29.29335400904106 34.0 27.0 38.0 2.0 40.0 66-67 28.872514120638957 34.0 26.0 37.0 2.0 39.5 68-69 28.440777677759932 34.0 26.0 36.5 2.0 39.0 70-71 27.972981073228205 33.0 26.0 36.0 2.0 39.0 72-73 27.498506556903962 33.0 25.5 35.5 2.0 38.5 74-75 26.96469536307167 32.5 24.5 35.0 2.0 37.5 76-77 25.470490032395688 30.5 22.0 34.0 2.0 36.0 78-79 26.34310141809708 32.0 24.0 35.0 2.0 36.0 80-81 26.398533155686955 32.0 24.0 35.0 2.0 36.0 82-83 26.080096402523203 32.0 23.5 35.0 2.0 36.0 84-85 25.65923678583013 32.0 21.0 35.0 2.0 35.0 86-87 25.216671117002072 32.0 20.0 34.0 2.0 35.0 88-89 24.773971708713162 31.5 18.5 34.0 2.0 35.0 90-91 24.346423226438112 31.0 14.5 34.0 2.0 35.0 92-93 23.934359732080633 31.0 7.5 34.0 2.0 35.0 94-95 23.546089474222693 31.0 2.0 34.0 2.0 35.0 96-97 23.007718579140956 31.0 2.0 34.0 2.0 35.0 98-99 22.24253398886315 30.5 2.0 34.0 2.0 35.0 100-101 19.66104846231736 26.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 228932.0 3 104117.0 4 54919.0 5 39418.0 6 33811.0 7 33539.0 8 37865.0 9 43645.0 10 49403.0 11 56147.0 12 61329.0 13 67281.0 14 71425.0 15 75541.0 16 79844.0 17 81628.0 18 81222.0 19 80354.0 20 81205.0 21 84736.0 22 91714.0 23 102506.0 24 118281.0 25 140094.0 26 165394.0 27 195862.0 28 229458.0 29 269234.0 30 314787.0 31 371764.0 32 442277.0 33 536476.0 34 667684.0 35 847136.0 36 1083616.0 37 1149017.0 38 522900.0 39 23883.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.872306678564485 18.42344021938528 13.391196649386778 25.313056452663456 2 16.337835054053222 19.919185120647676 37.702863033816584 26.040116791482514 3 20.352322406486945 22.978160644656985 28.036362030570857 28.63315491828522 4 14.624663538442196 15.509466809954397 34.36182201791586 35.50404763368755 5 15.420366799242402 36.17007168726045 33.20266191581307 15.206899597684073 6 35.186037216284646 33.671851434320466 16.396313392628826 14.745797956766058 7 30.873728845291094 30.393521863206306 19.619250271120713 19.11349902038189 8 27.534166412595027 34.276614970842836 18.984573505432692 19.20464511112944 9 26.91979419800226 16.083520051479205 18.67763248472027 38.31905326579826 10-11 26.60623555043733 24.89908560939545 26.490512726639654 22.00416611352757 12-13 27.01640434389111 21.804787814014375 26.762451190122334 24.416356651972183 14-15 24.096979027289425 23.492805155806902 23.97517158490867 28.435044231995004 16-17 24.57886836395525 26.56361761735852 24.683740562262596 24.173773456423632 18-19 24.556073928226958 25.973214319023896 25.923114207763653 23.5475975449855 20-21 25.054967023802412 25.172472539727544 25.828180632109444 23.9443798043606 22-23 24.866095722094162 24.847642791674108 25.653849312853623 24.63241217337811 24-25 24.604885311037478 25.072657530347026 25.687268582487295 24.6351885761282 26-27 24.517633333683346 25.24458951473883 25.752264777233574 24.48551237434425 28-29 24.53136925563889 25.384104613247636 25.63771742276522 24.446808708348254 30-31 24.836051283407528 25.246957856576017 25.470057648885362 24.44693321113109 32-33 24.63571801657657 25.261470172182243 25.390105418825026 24.71270639241616 34-35 24.773360179048957 25.223966112524337 25.570974450822586 24.43169925760412 36-37 24.818651764745706 25.127519912750213 25.534980090835475 24.518848231668606 38-39 24.772476373859455 25.227959654523236 25.50428116762434 24.495282803992964 40-41 24.817096783612026 25.09848634728583 25.51937469393758 24.56504217516456 42-43 24.698275236456745 25.020008661480063 25.46670765829618 24.815008443767013 44-45 24.59519741742236 25.106315367122782 25.566491881119056 24.731995334335796 46-47 24.687584598909595 25.017544368910134 25.542277755598924 24.752593276581347 48-49 24.581275355473423 25.107873759299075 25.51777081791935 24.793080067308157 50-51 24.499994063305127 25.19173086662036 25.576250880251244 24.732024189823264 52-53 24.633971494527334 25.126777562896397 25.483401383353314 24.755849559222963 54-55 24.406063175409244 24.961909128312566 25.687492697445162 24.944534998833028 56-57 24.48286320654236 25.049478225967142 25.589095736596086 24.878562830894417 58-59 24.477326041996992 24.95069968507332 25.61649697539277 24.955477297536916 60-61 24.56073301393806 24.99701258923294 25.632437584340927 24.809816812488073 62-63 24.40863533764313 24.9744716624986 25.625793431856874 24.991099568001392 64-65 24.262979772600133 24.852028105869703 25.69380350360323 25.191188617926937 66-67 24.283713960609195 24.938104156938877 25.56834141749902 25.209840464952908 68-69 24.236431556027007 24.947607387780174 25.551105309925386 25.264855746267433 70-71 24.192463831438246 24.788581553745225 25.63127787677472 25.387676738041804 72-73 24.15538690158027 24.893821387418136 25.49706337917082 25.45372833183078 74-75 24.023639081426868 24.989425424744482 25.533594329686682 25.453341164141964 76-77 24.05969750852861 24.73207129683148 25.710154184019324 25.498077010620584 78-79 23.92495280364595 24.75264817290476 25.728888943988608 25.593510079460685 80-81 23.920611001928236 24.905654468298337 25.60765990558822 25.56607462418521 82-83 23.921788108744416 24.808439002200565 25.665580368094222 25.6041925209608 84-85 23.838936792612206 24.806151256830976 25.567750186648126 25.78716176390869 86-87 23.72172742226894 24.88468860465341 25.696763260666835 25.69682071241082 88-89 23.58125499659453 24.72672618146739 25.695294820593507 25.996724001344575 90-91 23.635003511747026 24.67688218052778 25.72210783493104 25.966006472794156 92-93 23.627986852947252 24.666625183396693 25.7125959310203 25.99279203263575 94-95 23.527476343507274 24.56899001493702 25.732339749646506 26.171193891909205 96-97 23.35681519919917 24.535856148470057 25.830331570568386 26.27699708176239 98-99 23.2555922790566 24.467383696402 25.80510419703964 26.47191982750176 100-101 23.497849874256975 24.25129288859797 25.862050474201098 26.388806762943958 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 109.0 1 100.5 2 142.5 3 199.0 4 191.0 5 220.5 6 402.0 7 848.0 8 1246.5 9 1293.0 10 1079.5 11 923.0 12 957.5 13 1051.0 14 1185.0 15 1249.0 16 1326.5 17 1449.0 18 1627.5 19 1892.0 20 2054.0 21 2261.5 22 2546.5 23 2918.5 24 3396.0 25 3956.5 26 4948.5 27 6350.5 28 8235.0 29 11323.0 30 16352.0 31 23760.0 32 34909.5 33 49168.0 34 65344.5 35 84234.5 36 107895.0 37 132710.0 38 154990.0 39 177591.5 40 199997.0 41 221701.0 42 244254.0 43 270522.0 44 297456.0 45 322756.0 46 347352.5 47 369391.5 48 390592.5 49 406064.5 50 412464.5 51 415104.0 52 415588.5 53 414167.0 54 409070.5 55 393470.5 56 367934.5 57 335345.0 58 301517.0 59 267056.5 60 227808.0 61 188809.0 62 152623.0 63 117849.5 64 86734.5 65 63138.0 66 46224.0 67 34563.5 68 25507.0 69 18249.0 70 13050.5 71 9243.0 72 6542.0 73 4734.5 74 3438.0 75 2319.0 76 1547.0 77 896.5 78 440.0 79 226.0 80 131.0 81 76.0 82 41.5 83 27.0 84 17.0 85 9.0 86 5.0 87 2.5 88 0.5 89 1.0 90 1.5 91 1.0 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.2414536355340471 2 0.0 3 1.032294294715892E-4 4 0.014360360633158853 5 0.016218490363647458 6 0.10789769367102661 7 0.13752453992937272 8 0.1554176410377815 9 0.11108633604803794 10-11 0.12121429007286164 12-13 0.09603777921840181 14-15 0.11971746334552358 16-17 0.07353949856189934 18-19 0.07898771845067766 20-21 0.05517613005256443 22-23 0.08132758551870035 24-25 0.07468649222269479 26-27 0.051700739260354255 28-29 0.018501007748630373 30-31 0.03254594512507048 32-33 0.04005301863497661 34-35 0.04537506922106743 36-37 0.03712244983164427 38-39 0.03916983351616412 40-41 0.021569215791258166 42-43 0.03261476474471821 44-45 0.01802500537940027 46-47 0.030791044824053464 48-49 4.0718274958237964E-4 50-51 0.016889481655212788 52-53 0.008195269706383386 54-55 0.016751842415917335 56-57 0.011160248319539589 58-59 0.008034690593872027 60-61 0.030997503682996648 62-63 0.013425560799610572 64-65 0.015283690530099177 66-67 0.059844394252001845 68-69 0.07816761798320894 70-71 0.034037036884104546 72-73 0.0566901616848144 74-75 0.04755435717657876 76-77 0.22352612461581448 78-79 0.07989957841101003 80-81 0.0162586351417753 82-83 0.010558076647621985 84-85 0.024964317027212655 86-87 0.17764637818399706 88-89 0.3802685433318147 90-91 0.2758921201994301 92-93 0.2772971874339045 94-95 0.001967094128264172 96-97 0.005861137606664676 98-99 0.005069711980715826 100-101 0.005339255491002752 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 8718444.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.1188908386061 #Duplication Level Percentage of deduplicated Percentage of total 1 73.98807464476567 37.08200236479651 2 13.174487593261441 13.205814110824813 3 4.8675378363760915 7.318667924223547 4 2.3797945041891273 4.770906438950783 5 1.398997465663625 3.5058100632540903 6 0.8743832084226096 2.629386994442576 7 0.6037775663815941 2.1182463358194856 8 0.41467349809251847 1.6626380627649495 9 0.306932512870841 1.3844805396653466 >10 1.7950395037468643 16.63233771001565 >50 0.14028024681277831 4.817609534451002 >100 0.05530876274074492 4.565789970708685 >500 5.977805712584776E-4 0.1886619879930943 >1k 1.1487610481437127E-4 0.11764796208946124 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.587974643181742E-5 2 0.0 0.0 0.0 0.0 4.587974643181742E-5 3 0.0 0.0 0.0 0.0 4.587974643181742E-5 4 0.0 0.0 0.0 1.1469936607954356E-5 4.587974643181742E-5 5 0.0 1.1469936607954356E-5 0.0 3.440980982386307E-5 4.587974643181742E-5 6 0.0 1.1469936607954356E-5 0.0 3.440980982386307E-5 6.881961964772613E-5 7 0.0 1.1469936607954356E-5 0.0 3.440980982386307E-5 6.881961964772613E-5 8 1.1469936607954356E-5 1.1469936607954356E-5 0.0 3.440980982386307E-5 6.881961964772613E-5 9 1.1469936607954356E-5 1.1469936607954356E-5 0.0 6.881961964772613E-5 8.028955625568049E-5 10-11 1.7204904911931534E-5 1.1469936607954356E-5 0.0 9.175949286363485E-5 9.175949286363485E-5 12-13 2.293987321590871E-5 1.1469936607954356E-5 0.0 9.749446116761202E-5 9.175949286363485E-5 14-15 2.293987321590871E-5 2.293987321590871E-5 0.0 1.032294294715892E-4 1.3763923929545227E-4 16-17 2.293987321590871E-5 3.440980982386307E-5 0.0 1.261693026874979E-4 1.8925395403124686E-4 18-19 2.293987321590871E-5 4.587974643181742E-5 0.0 1.3763923929545227E-4 2.4086866876704146E-4 20-21 2.293987321590871E-5 4.587974643181742E-5 0.0 1.4337420759942944E-4 2.5807357367897297E-4 22-23 2.293987321590871E-5 4.587974643181742E-5 0.0 2.293987321590871E-4 3.2115822502272196E-4 24-25 2.293987321590871E-5 4.587974643181742E-5 0.0 4.874723058380601E-4 3.7277293975851656E-4 26-27 2.293987321590871E-5 4.587974643181742E-5 0.0 9.749446116761202E-4 4.18652686190334E-4 28-29 2.293987321590871E-5 4.587974643181742E-5 0.0 0.0033606914261306263 4.2438765449431115E-4 30-31 2.293987321590871E-5 4.587974643181742E-5 0.0 0.013494380419258298 4.2438765449431115E-4 32-33 2.293987321590871E-5 4.587974643181742E-5 0.0 0.036807026574925523 4.4159255940624267E-4 34-35 2.293987321590871E-5 5.734968303977178E-5 0.0 0.06775865051149035 4.702674009261286E-4 36-37 2.867484151988589E-5 7.45545879517033E-5 0.0 0.11988951239464289 4.932072741420373E-4 38-39 3.440980982386307E-5 9.749446116761202E-5 0.0 0.2061032909083318 5.104121790539687E-4 40-41 3.440980982386307E-5 1.1469936607954356E-4 0.0 0.30800220773339826 5.218821156619232E-4 42-43 3.440980982386307E-5 1.1469936607954356E-4 0.0 0.414122061230192 5.448219888778319E-4 44-45 3.440980982386307E-5 1.1469936607954356E-4 0.0 0.5430670885768148 5.620268937897634E-4 46-47 3.440980982386307E-5 1.261693026874979E-4 0.0 0.6942007082915254 5.964367036136264E-4 48-49 3.440980982386307E-5 1.261693026874979E-4 0.0 0.8559898991150257 6.193765768295351E-4 50-51 3.440980982386307E-5 1.261693026874979E-4 0.0 1.031216120674744 6.193765768295351E-4 52-53 3.440980982386307E-5 1.261693026874979E-4 0.0 1.2157960755382498 6.423164500454438E-4 54-55 3.440980982386307E-5 1.6631408081533815E-4 0.0 1.4251338885700247 6.881961964772613E-4 56-57 3.440980982386307E-5 1.9498892233522404E-4 0.0 1.666793982963015 7.1113606969317E-4 58-59 3.440980982386307E-5 2.064588589431784E-4 0.0 1.931325130952266 7.1113606969317E-4 60-61 3.440980982386307E-5 2.2939873215908712E-4 0.0 2.215682064368367 7.226060063011243E-4 62-63 3.440980982386307E-5 2.2939873215908712E-4 0.0 2.514829481040424 7.570158161249875E-4 64-65 3.440980982386307E-5 2.4086866876704146E-4 0.0 2.84148754066666 7.856906576448734E-4 66-67 4.0144778127840245E-5 2.6380854198295014E-4 0.0 3.2112840318754126 7.914256259488505E-4 68-69 4.587974643181742E-5 2.6380854198295014E-4 0.0 3.6158803107526984 7.914256259488505E-4 70-71 4.587974643181742E-5 2.6380854198295014E-4 0.0 4.059204830586742 8.143654991647592E-4 72-73 4.587974643181742E-5 2.6380854198295014E-4 0.0 4.518862540150513 9.290648652443028E-4 74-75 4.587974643181742E-5 2.6380854198295014E-4 0.0 5.003387072280329 9.290648652443028E-4 76-77 4.587974643181742E-5 2.6380854198295014E-4 0.0 5.534181328686633 9.290648652443028E-4 78-79 4.587974643181742E-5 2.695435102869273E-4 0.0 6.114233227855797 9.290648652443028E-4 80-81 4.587974643181742E-5 2.7527847859090454E-4 0.0 6.7329904281085025 9.347998335482799E-4 82-83 5.734968303977178E-5 2.7527847859090454E-4 0.0 7.371366954929114 9.864145482840745E-4 84-85 5.734968303977178E-5 2.7527847859090454E-4 0.0 8.029924835211421 9.97884484892029E-4 86-87 6.308465134374896E-5 2.7527847859090454E-4 0.0 8.724245977837331 9.97884484892029E-4 88-89 6.881961964772613E-5 2.7527847859090454E-4 0.0 9.472125989454081 0.0010093544214999832 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 13130 0.0 38.64764 1 GGTATCA 7910 0.0 36.46923 1 TCAACGC 16400 0.0 30.466003 4 CAACGCA 16880 0.0 29.402716 5 TATCAAC 17435 0.0 28.683195 2 ATCAACG 17560 0.0 28.507536 3 AACGCAG 18385 0.0 26.887833 6 GTACATG 27540 0.0 25.045801 1 TACATGG 28470 0.0 23.854465 2 ACATGGG 30190 0.0 21.945967 3 ACGCAGA 22260 0.0 21.652576 7 CGCAGAG 23495 0.0 20.0692 8 CATGGGG 22365 0.0 19.537209 4 AGTACAT 20745 0.0 19.092981 2 GAGTACA 22610 0.0 19.074718 1 GTATATA 1875 0.0 17.009989 1 GCAGAGT 26865 0.0 16.683283 9 AGAGTAC 21035 0.0 16.340956 10-11 GTATAGG 1865 0.0 16.33547 1 GTGTAGC 4595 0.0 15.332277 1 >>END_MODULE