##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921566_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6730636 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.422727213297524 31.0 28.0 31.0 10.0 34.0 2 27.385045781706218 31.0 27.0 31.0 10.0 34.0 3 27.481989220632343 31.0 27.0 33.0 10.0 34.0 4 30.81165316323747 35.0 31.0 37.0 10.0 37.0 5 30.702444018663318 35.0 31.0 37.0 10.0 37.0 6 30.7843047818958 35.0 31.0 37.0 10.0 37.0 7 30.567076870595884 35.0 30.0 37.0 10.0 37.0 8 30.502040668965012 35.0 30.0 37.0 10.0 37.0 9 31.678946684978953 37.0 31.0 39.0 10.0 39.0 10-11 31.42750484501019 37.0 30.0 39.0 8.0 39.0 12-13 31.205337875945155 37.0 30.0 39.0 4.5 39.0 14-15 31.844386919750228 37.0 30.0 40.0 2.0 41.0 16-17 31.66781631037542 37.0 30.0 40.0 2.0 41.0 18-19 31.45183991527695 37.0 30.0 40.0 2.0 41.0 20-21 31.29114707733415 37.0 30.0 40.0 2.0 41.0 22-23 31.03770572350072 37.0 29.0 40.0 2.0 41.0 24-25 31.134949654089155 37.0 30.0 40.0 2.0 41.0 26-27 30.865885482441776 37.0 29.0 40.0 2.0 41.0 28-29 30.642419899100176 36.5 28.5 40.0 2.0 41.0 30-31 30.369710826733165 36.0 27.5 40.0 2.0 41.0 32-33 30.105694172140645 36.0 27.0 39.0 2.0 41.0 34-35 29.741559267207435 36.0 26.5 39.0 2.0 40.5 36-37 29.415248276685887 35.0 25.0 39.0 2.0 40.0 38-39 29.17297904685382 35.0 25.0 39.0 2.0 40.0 40-41 28.912523645610904 35.0 24.5 39.0 2.0 40.0 42-43 28.634608750198346 35.0 24.0 39.0 2.0 40.0 44-45 28.34318190732644 34.5 23.5 39.0 2.0 40.0 46-47 28.03052824428479 34.0 23.0 38.0 2.0 40.0 48-49 27.71765238827356 34.0 22.0 38.0 2.0 40.0 50-51 26.847458100542056 33.0 20.5 37.5 2.0 39.5 52-53 27.070535830492098 33.5 21.5 37.5 2.0 39.5 54-55 27.581952805054378 34.0 22.0 38.0 2.0 40.0 56-57 27.528188866549907 34.0 21.5 38.0 2.0 40.0 58-59 27.251650438383535 34.0 20.0 38.0 2.0 40.0 60-61 26.87684455079728 33.5 18.5 38.0 2.0 40.0 62-63 26.425279498103894 33.0 16.5 37.5 2.0 40.0 64-65 25.92422528866514 32.5 12.5 37.0 2.0 39.5 66-67 25.548268989735888 32.0 8.0 36.0 2.0 39.0 68-69 25.077668440248438 32.0 7.0 36.0 2.0 39.0 70-71 24.637089347871434 31.5 4.0 35.0 2.0 38.5 72-73 24.14724812038565 31.0 2.0 35.0 2.0 37.5 74-75 23.684000962167616 31.0 2.0 35.0 2.0 37.0 76-77 23.241172676698014 30.5 2.0 34.5 2.0 36.0 78-79 22.825009256183222 30.0 2.0 34.0 2.0 36.0 80-81 22.364819387053466 30.0 2.0 34.0 2.0 35.5 82-83 21.81628147770879 29.0 2.0 34.0 2.0 35.0 84-85 21.38003184245887 29.0 2.0 34.0 2.0 35.0 86-87 20.86001634912362 29.0 2.0 34.0 2.0 35.0 88-89 20.3201271766888 28.0 2.0 34.0 2.0 35.0 90-91 19.708604654894426 27.0 2.0 33.5 2.0 35.0 92-93 19.140369721375514 26.0 2.0 33.0 2.0 35.0 94-95 18.443655918994878 25.0 2.0 33.0 2.0 35.0 96-97 17.7814691657668 24.0 2.0 33.0 2.0 34.0 98 17.29588229106432 20.0 2.0 32.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 548291.0 3 87902.0 4 62782.0 5 51041.0 6 46787.0 7 48581.0 8 54748.0 9 62227.0 10 65718.0 11 67158.0 12 67579.0 13 65835.0 14 63973.0 15 65757.0 16 68710.0 17 72451.0 18 75723.0 19 77502.0 20 81163.0 21 84940.0 22 91469.0 23 101118.0 24 112096.0 25 126468.0 26 142425.0 27 161646.0 28 184445.0 29 209769.0 30 240386.0 31 276109.0 32 323061.0 33 382556.0 34 460023.0 35 557149.0 36 654673.0 37 607686.0 38 264853.0 39 15836.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.510125096328544 16.516199662330376 12.585667386327106 25.388007855013978 2 16.59935522067555 18.180994409998053 38.72242513446046 26.497225234865933 3 21.265105773894724 21.413894484997634 26.73093347061572 30.590066270491928 4 14.151153652854651 14.119433815786303 33.9305252251558 37.79888730620325 5 16.024138041844353 35.475682240966236 32.54041553946696 15.959764177722446 6 36.4535106175187 32.07646539952712 16.24283997182813 15.227184011126047 7 32.20890715097359 29.322135296482664 18.60874722148525 19.8602103310585 8 28.27243234825425 33.700338147281 18.213546338184134 19.81368316628061 9 27.17786747325233 16.028572056894483 17.96496606503602 38.82859440481717 10-11 27.261331357843314 24.23202379859273 25.773807878841364 22.732836964722587 12-13 27.603221841169688 21.08610174246221 26.192258493780784 25.118417922587316 14-15 24.59420660904173 22.79184604807157 23.349013743415334 29.26493359947137 16-17 25.231423733099838 25.927414795458137 23.94908937894296 24.892072092499067 18-19 25.229646202625588 25.353911464475658 25.15545421483999 24.260988118058762 20-21 25.718915829396195 24.468961098481213 25.17696586997291 24.635157202149685 22-23 25.52375921119941 24.107792812459078 25.01154688212617 25.356901094215345 24-25 25.172233209706175 24.46982147639171 25.036842063786025 25.32110325011609 26-27 25.15544760717085 24.631298485132156 25.038823795510613 25.17443011218638 28-29 25.20350548748469 24.68968383220583 25.001448311922736 25.105362368386746 30-31 25.462585709731293 24.59854418363414 24.784387386572895 25.154482720061665 32-33 25.193506882969164 24.668200673540372 24.791974342338143 25.34631810115232 34-35 25.392577289469013 24.616030717542596 24.95229449966984 25.039097493318547 36-37 25.446598356528195 24.482515265339007 24.899724347329823 25.171162030802975 38-39 25.462201325193785 24.585943131295167 24.842554464092277 25.109301079418778 40-41 25.51502705558336 24.455840063204146 24.900093196881226 25.129039684331268 42-43 25.31722183672284 24.369442592746815 24.89628235861801 25.41705321191234 44-45 25.24432497547507 24.468785501516223 24.954312064477463 25.332577458531247 46-47 25.450104191181893 24.47604542113805 24.867389483284345 25.206460904395712 48-49 25.301150753681938 24.484577503382727 24.834627983405102 25.37964375953023 50-51 25.146295430635917 24.638280200987705 24.94573112829384 25.269693240082535 52-53 25.22563978225935 24.576988102036413 25.020753736325112 25.17661837937912 54-55 24.940389121678376 24.360469382349574 25.229569739806045 25.469571756166005 56-57 25.10336512223388 24.506719329397146 25.169332707456427 25.22058284091255 58-59 25.179187016644168 24.437326119363988 25.162430221327597 25.221056642664248 60-61 25.25651812254931 24.32324377209528 25.21605312395306 25.20418498140235 62-63 25.02035884040339 24.4415520130726 25.248704369658693 25.28938477686532 64-65 24.997725907594006 24.277539482717792 25.289898317499688 25.434836292188518 66-67 24.944369079962502 24.548870862732315 25.113226951333107 25.39353310597207 68-69 24.94346211702792 24.309355197903276 25.202950816421417 25.544231868647387 70-71 24.93168503975034 24.17837593954031 25.33837760297773 25.551561417731616 72-73 24.929568753921334 24.307587528632254 25.207888418784247 25.554955298662165 74-75 24.732239385964565 24.392659093467614 25.370750766810428 25.504350753757386 76-77 24.888060015641834 24.148384768815813 25.330239438354347 25.633315777188002 78-79 24.780886284401994 24.088288221295183 25.426177080288458 25.704648414014365 80-81 24.823072995027196 24.274481936719475 25.294344400419543 25.60810066783379 82-83 24.858484316925388 24.290789786043636 25.32538734353175 25.52533855349922 84-85 24.89911799914006 24.274905380167247 25.23410860290769 25.591868017785004 86-87 24.743438256658596 24.26327435276588 25.450504749487802 25.542782641087726 88-89 24.72201010753103 24.056958203540134 25.41219781977976 25.80883386914908 90-91 24.763744385865046 24.044494347866255 25.44401213577042 25.747749130498278 92-93 24.789446370416748 24.104172064761343 25.476382010327686 25.62999955449422 94-95 24.82712156189743 23.980288065408203 25.491229892445265 25.701360480249097 96-97 24.66903704688347 23.992972758261676 25.526460085092573 25.81153010976228 98 24.75986502937115 23.951132084553496 25.41004041876481 25.878962467310547 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 74.0 1 69.5 2 102.0 3 188.5 4 236.0 5 261.0 6 394.0 7 689.0 8 967.0 9 1144.0 10 1254.5 11 1397.0 12 1690.0 13 1974.0 14 2198.5 15 2406.5 16 2520.5 17 2563.5 18 2487.0 19 2318.0 20 2138.0 21 1945.5 22 1867.0 23 1928.0 24 2096.5 25 2447.5 26 2948.5 27 3569.0 28 4520.0 29 6124.5 30 8898.5 31 13505.5 32 20956.5 33 31136.5 34 44117.5 35 59894.5 36 77945.5 37 96174.5 38 113546.5 39 129217.5 40 144154.5 41 161931.5 42 182806.0 43 205405.0 44 226856.5 45 248294.0 46 271294.0 47 292621.5 48 308606.0 49 320259.5 50 325655.0 51 328253.5 52 334453.5 53 340279.0 54 339775.0 55 332804.0 56 317598.5 57 295528.0 58 271577.5 59 243375.5 60 210420.5 61 174919.5 62 141018.5 63 108837.0 64 79705.0 65 57402.5 66 41353.0 67 29695.0 68 21147.0 69 15010.0 70 10549.5 71 7417.5 72 5356.0 73 3903.5 74 2770.0 75 1900.5 76 1254.5 77 767.5 78 455.5 79 278.5 80 176.5 81 115.5 82 81.5 83 59.5 84 48.0 85 38.5 86 28.0 87 20.0 88 23.5 89 21.5 90 15.0 91 18.5 92 17.5 93 13.5 94 12.5 95 10.5 96 9.5 97 10.0 98 6.5 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.3049786082622801 2 0.14689547911965528 3 0.14405770866230175 4 0.13802558926080685 5 0.13318206481527153 6 0.0498912732764036 7 0.039684214092100656 8 0.015214015436282693 9 0.010459635612444352 10-11 0.002288045290222202 12-13 0.006641274316424183 14-15 0.01181166237484838 16-17 0.0066709891903231735 18-19 0.05191931342000964 20-21 0.10329633039136271 22-23 0.10340033245000918 24-25 0.078848417890969 26-27 0.08948634274680728 28-29 0.10833300151724146 30-31 0.08337993616056491 32-33 0.02106784559438365 34-35 0.3233869726427042 36-37 0.4213717693246225 38-39 0.39124831590952175 40-41 0.38647907864873393 42-43 0.36144429738883516 44-45 0.34433595874149187 46-47 0.349068052409906 48-49 0.3421964878207646 50-51 0.34263478221077476 52-53 0.39255577036107736 54-55 0.37862692322092595 56-57 0.361214007116118 58-59 0.34037645179445153 60-61 0.35070979919282513 62-63 0.34879318982634033 64-65 0.3664438249223402 66-67 0.3889825567747238 68-69 0.3477754553952999 70-71 0.32147036327621936 72-73 0.3052608995643205 74-75 0.2905743231397449 76-77 0.2939618187642297 78-79 0.3008705269457448 80-81 0.2902400308083813 82-83 0.3008482407903205 84-85 0.29271379406047215 86-87 0.28802627270290654 88-89 0.31326162936162344 90-91 0.2956035655471489 92-93 0.2847130642631692 94-95 0.3013831085205024 96-97 0.29981564892233065 98 0.2992139227258761 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 6730636.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.39881375566424 #Duplication Level Percentage of deduplicated Percentage of total 1 77.82500368639764 41.5576287738383 2 11.012531830745404 11.761122724165961 3 4.174546467832495 6.687474880504602 4 2.078320120291692 4.43919316112423 5 1.2171335867253819 3.2496744856656137 6 0.7479275626326126 2.396306677184807 7 0.5163173744326285 1.9299514721299038 8 0.3859692529363644 1.6488240202369429 9 0.27404314064680907 1.3170220765574634 >10 1.598663684642921 15.824870436860841 >50 0.11884804109040403 4.326045409109054 >100 0.049543802028515 4.395739089835344 >500 9.548717857477053E-4 0.3302103588084195 >1k 1.9657781134629578E-4 0.13593643397844288 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.4857436949494818E-5 1.1885949559595854E-4 2 0.0 0.0 0.0 1.4857436949494818E-5 1.4857436949494818E-4 3 0.0 0.0 0.0 1.4857436949494818E-5 1.4857436949494818E-4 4 0.0 0.0 0.0 1.4857436949494818E-5 1.4857436949494818E-4 5 1.4857436949494818E-5 0.0 0.0 1.4857436949494818E-5 1.4857436949494818E-4 6 1.4857436949494818E-5 0.0 0.0 1.4857436949494818E-5 2.525764281414119E-4 7 1.4857436949494818E-5 0.0 0.0 1.4857436949494818E-5 2.674338650909067E-4 8 1.4857436949494818E-5 0.0 0.0 1.4857436949494818E-5 2.8229130204040153E-4 9 1.4857436949494818E-5 0.0 0.0 1.4857436949494818E-5 3.8629336068686526E-4 10-11 2.9714873898989635E-5 0.0 0.0 2.9714873898989635E-5 4.011507976363601E-4 12-13 2.9714873898989635E-5 7.428718474747409E-6 0.0 5.942974779797927E-5 6.240123518787824E-4 14-15 2.9714873898989635E-5 1.4857436949494818E-5 0.0 7.428718474747409E-5 7.948728767979727E-4 16-17 4.457231084848445E-5 1.4857436949494818E-5 0.0 8.171590322222149E-5 0.0010400205864646373 18-19 4.457231084848445E-5 1.4857436949494818E-5 0.0 1.0400205864646373E-4 0.001144022645111101 20-21 4.457231084848445E-5 1.4857436949494818E-5 0.0 1.2628821407070594E-4 0.001218309829858575 22-23 4.457231084848445E-5 1.4857436949494818E-5 0.0 1.9314668034343263E-4 0.0013297406069797861 24-25 4.457231084848445E-5 1.4857436949494818E-5 0.0 3.565784867878756E-4 0.0014411713841009973 26-27 4.457231084848445E-5 1.4857436949494818E-5 0.0 6.462985073030245E-4 0.0014634575395252396 28-29 4.457231084848445E-5 1.4857436949494818E-5 0.0 0.0021691857946262434 0.0014708862579999869 30-31 4.457231084848445E-5 2.9714873898989635E-5 0.0 0.00785215542780801 0.001493172413424229 32-33 4.457231084848445E-5 6.685846627272668E-5 0.0 0.020532977864201836 0.0015228872873232187 34-35 4.457231084848445E-5 7.428718474747409E-5 0.0 0.037455598549676436 0.0015748883166464506 36-37 4.457231084848445E-5 7.428718474747409E-5 0.0 0.06668017702933274 0.0015748883166464506 38-39 4.457231084848445E-5 1.0400205864646373E-4 0.0 0.11908978586867572 0.0016417467829191773 40-41 4.457231084848445E-5 1.3371693254545335E-4 0.0 0.1807778640829782 0.0017011765307171566 42-43 4.457231084848445E-5 1.7086052491919042E-4 0.0 0.2442414060127453 0.0017383201230908936 44-45 4.457231084848445E-5 1.782892433939378E-4 0.0 0.321715510985886 0.001797749870888873 46-47 4.457231084848445E-5 1.782892433939378E-4 0.0 0.41584480277941044 0.0019686103958080634 48-49 4.457231084848445E-5 1.782892433939378E-4 0.0 0.522528628795258 0.0020800411729292746 50-51 5.2001029323231864E-5 2.0057539881818002E-4 0.0 0.6440401768867013 0.0021691857946262434 52-53 5.942974779797927E-5 2.2286155424242225E-4 0.0 0.7665100296613871 0.0022657591347979597 54-55 5.942974779797927E-5 2.525764281414119E-4 0.0 0.902596723400285 0.0023697611934444234 56-57 7.428718474747409E-5 2.674338650909067E-4 0.0 1.0652559431233541 0.0023920473488686657 58-59 7.428718474747409E-5 2.674338650909067E-4 0.0 1.248306995059605 0.0024291909412424025 60-61 7.428718474747409E-5 2.748625835656541E-4 0.0 1.4533099100887346 0.0025257642814141192 62-63 1.0400205864646373E-4 2.8229130204040153E-4 0.0 1.6644638040149549 0.0026446237770100774 64-65 1.0400205864646373E-4 2.8229130204040153E-4 0.0 1.8852601745213975 0.002652052495484825 66-67 1.0400205864646373E-4 2.9714873898989636E-4 0.0 2.1397680694662435 0.0026817673693838146 68-69 1.0400205864646373E-4 2.9714873898989636E-4 0.0 2.434502474951847 0.002704053524808057 70-71 1.0400205864646373E-4 2.9714873898989636E-4 0.0 2.759709483620864 0.0027857694280302783 72-73 1.0400205864646373E-4 3.0457745746464374E-4 0.0 3.094432680656033 0.0030977756039696695 74-75 1.0400205864646373E-4 3.120061759393912E-4 0.0 3.4401206661599293 0.0032092063810908807 76-77 1.0400205864646373E-4 3.26863612888886E-4 0.0 3.8187327319439053 0.003246349973464618 78-79 1.0400205864646373E-4 3.342923313636334E-4 0.0 4.2410479485148205 0.003276064847363607 80-81 1.0400205864646373E-4 3.417210498383808E-4 0.0 4.703663962811241 0.003350352032111081 82-83 1.0400205864646373E-4 3.417210498383808E-4 0.0 5.17721505070249 0.0035880710233029984 84-85 1.1885949559595854E-4 3.417210498383808E-4 0.0 5.659242306373425 0.003595499741777746 86 1.3371693254545335E-4 3.417210498383808E-4 0.0 6.033679432374593 0.003595499741777746 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9120 0.0 38.4986 1 TCAACGC 11400 0.0 29.782152 4 GGTATCA 5800 0.0 29.276125 1 CAACGCA 11710 0.0 28.91397 5 TATCAAC 12120 0.0 28.392405 2 ATCAACG 12650 0.0 26.984728 3 AACGCAG 12730 0.0 26.676298 6 GTACATG 22445 0.0 25.299435 1 TACATGG 23710 0.0 23.582073 2 ACATGGG 24540 0.0 22.091602 3 ACGCAGA 15625 0.0 20.789396 7 CGCAGAG 16340 0.0 19.59644 8 GAGTACA 17745 0.0 19.137959 1 CATGGGG 19040 0.0 19.03823 4 AGTACAT 16530 0.0 18.872086 2 GTGTAGC 3655 0.0 18.633291 1 GTATAGG 1745 0.0 16.877176 1 GCAGAGT 18300 0.0 16.417578 9 GTATATG 1870 0.0 16.24118 1 GTATATA 1530 0.0 15.940417 1 >>END_MODULE