Basic Statistics
Measure | Value |
---|---|
Filename | SRR2921566_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6730636 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATCAA | 9470 | 0.0 | 38.643024 | 1 |
GGTATCA | 6020 | 0.0 | 37.15319 | 1 |
TCAACGC | 11660 | 0.0 | 30.829529 | 4 |
CAACGCA | 12100 | 0.0 | 29.786726 | 5 |
TATCAAC | 12480 | 0.0 | 29.030876 | 2 |
AACGCAG | 13115 | 0.0 | 27.694996 | 6 |
ATCAACG | 13060 | 0.0 | 27.63376 | 3 |
GTACATG | 22055 | 0.0 | 25.331202 | 1 |
TACATGG | 23610 | 0.0 | 22.827065 | 2 |
ACGCAGA | 16775 | 0.0 | 21.369413 | 7 |
ACATGGG | 24315 | 0.0 | 21.170183 | 3 |
CGCAGAG | 17645 | 0.0 | 19.992878 | 8 |
CATGGGG | 18495 | 0.0 | 18.280802 | 4 |
GAGTACA | 17775 | 0.0 | 17.910646 | 1 |
AGTACAT | 16590 | 0.0 | 17.602684 | 2 |
GCAGAGT | 19760 | 0.0 | 16.577978 | 9 |
TACACTG | 6130 | 0.0 | 16.500057 | 5 |
AGAGTAC | 16035 | 0.0 | 16.080412 | 5 |
CAGAGTA | 18025 | 0.0 | 15.358997 | 4 |
GTATTAG | 1445 | 0.0 | 15.149028 | 1 |