##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921566_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6730636 Sequences flagged as poor quality 0 Sequence length 101 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.04707058887154 31.0 30.0 34.0 26.0 34.0 2 30.032101275421816 31.0 30.0 34.0 26.0 34.0 3 30.21551707743518 31.0 30.0 34.0 26.0 34.0 4 33.857267426139224 35.0 35.0 37.0 30.0 37.0 5 33.372166612486545 35.0 33.0 37.0 28.0 37.0 6 33.26269954280695 35.0 33.0 37.0 27.0 37.0 7 33.078055327906604 35.0 33.0 37.0 26.0 37.0 8 32.97570913060816 35.0 33.0 37.0 26.0 37.0 9 34.29657583622112 37.0 34.0 39.0 27.0 39.0 10-11 34.083263899577986 37.0 33.5 39.0 26.0 39.0 12-13 33.89902603557821 37.0 33.0 39.0 25.0 39.0 14-15 34.76714161930611 38.0 33.0 40.0 25.0 41.0 16-17 34.605921862361896 38.0 33.0 40.0 24.5 41.0 18-19 34.45519888462249 38.0 33.0 40.0 24.0 41.0 20-21 34.305339198257045 38.0 33.0 40.0 23.0 41.0 22-23 34.12209306817364 38.0 33.0 40.0 22.0 41.0 24-25 33.95705487564622 38.0 33.0 40.0 20.5 41.0 26-27 33.86242555681216 38.0 32.5 40.0 20.0 41.0 28-29 33.8789777073073 38.0 33.0 40.0 19.5 41.0 30-31 33.72252503329552 38.0 32.5 40.0 18.5 41.0 32-33 33.55039464324025 38.0 32.0 40.0 18.0 41.0 34-35 33.33956924724498 38.0 32.0 40.0 16.5 41.0 36-37 33.15931904503527 38.0 32.0 40.0 16.0 41.0 38-39 32.97031068089257 38.0 31.0 40.0 15.0 41.0 40-41 32.98377813032825 38.0 32.0 40.0 15.0 41.0 42-43 32.76965029753504 37.5 31.0 40.0 13.5 41.0 44-45 32.55752101287308 37.0 31.0 40.0 9.0 41.0 46-47 32.27433224735374 37.0 31.0 40.0 8.5 41.0 48-49 31.964385386462737 37.0 30.0 40.0 7.5 41.0 50-51 31.669687975995135 36.5 30.0 40.0 6.5 41.0 52-53 31.317473935598358 36.0 30.0 39.0 2.0 41.0 54-55 30.969573900594238 35.5 29.0 39.0 2.0 40.0 56-57 30.595484810053613 35.0 28.0 39.0 2.0 40.0 58-59 30.084182163468654 35.0 28.0 38.5 2.0 40.0 60-61 29.697150908175693 34.0 28.0 38.0 2.0 40.0 62-63 29.339632317064837 34.0 27.0 38.0 2.0 40.0 64-65 28.857024878481024 34.0 26.0 37.0 2.0 40.0 66-67 28.405919514886854 34.0 26.0 37.0 2.0 39.0 68-69 27.947571150779808 33.0 26.0 36.0 2.0 39.0 70-71 27.459935806957915 33.0 25.0 36.0 2.0 39.0 72-73 26.96911829729018 32.5 24.0 35.0 2.0 38.0 74-75 26.422647800297028 32.0 22.5 35.0 2.0 37.0 76-77 24.985033955186402 30.5 20.5 34.0 2.0 35.5 78-79 25.84535644179837 31.5 22.0 34.5 2.0 36.0 80-81 25.892444785307063 32.0 22.5 35.0 2.0 36.0 82-83 25.56636497650445 32.0 20.5 35.0 2.0 35.5 84-85 25.1325209831582 32.0 19.5 34.5 2.0 35.0 86-87 24.67267929806336 31.0 17.5 34.0 2.0 35.0 88-89 24.211342657662662 31.0 13.0 34.0 2.0 35.0 90-91 23.763190729672502 31.0 7.0 34.0 2.0 35.0 92-93 23.33049751910518 31.0 2.0 34.0 2.0 35.0 94-95 22.91906515223821 30.0 2.0 34.0 2.0 35.0 96-97 22.350061792080275 30.0 2.0 34.0 2.0 35.0 98-99 21.539423540360822 30.0 2.0 34.0 2.0 35.0 100-101 18.937951034642197 25.0 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 180055.0 3 80897.0 4 43327.0 5 31245.0 6 27435.0 7 27084.0 8 30588.0 9 35579.0 10 40628.0 11 45334.0 12 50297.0 13 54701.0 14 58705.0 15 62272.0 16 65237.0 17 66798.0 18 67393.0 19 66975.0 20 67835.0 21 70408.0 22 75846.0 23 83689.0 24 96763.0 25 112015.0 26 132731.0 27 155332.0 28 182442.0 29 212590.0 30 249845.0 31 293658.0 32 347730.0 33 421272.0 34 521340.0 35 660575.0 36 828051.0 37 831442.0 38 338648.0 39 13874.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.65063573470653 17.91866062912805 13.243599313479196 25.187104322686228 2 16.742964557881308 19.296913397188618 37.47339775914193 26.48672428578815 3 21.14875690722654 22.207364776442983 27.085004795983497 29.558873520346975 4 14.884971337563528 15.038826315650264 33.43498698458805 36.64121536219815 5 15.99046005706134 35.700026747503564 32.631924631478846 15.677588563956252 6 36.469198168646685 32.667899586722896 15.937405459850723 14.925496784779693 7 32.12336013494886 29.52654975681265 18.680829671252592 19.6692604369859 8 28.174248463251892 34.12468414244404 18.13091193606378 19.570155458240286 9 26.920655876594914 16.022846028926562 17.991359335448827 39.0651387590297 10-11 27.21015237064724 24.47893927383146 25.80914598744602 22.501762368075276 12-13 27.519262831861962 21.206960986844717 26.318045262951728 24.955730918341594 14-15 24.470259092205932 22.94619691769258 23.38476065751687 29.198783332584615 16-17 25.169105275709917 26.133139905901132 24.013774344706835 24.683980473682112 18-19 25.1804463881393 25.49275794493821 25.212006151960747 24.114789514961743 20-21 25.598049333778803 24.566546490543793 25.241170474060798 24.5942337016166 22-23 25.39657662796338 24.264436263583647 25.114673476494765 25.22431363195821 24-25 25.162225352845624 24.56108122976504 25.07431596085151 25.20237745653782 26-27 25.07120927443801 24.717368507465647 25.142360946717858 25.069061271378484 28-29 25.152123879392228 24.837095044657875 25.04921698627987 24.96156408967002 30-31 25.37123950709173 24.67955953750576 24.88777171283886 25.061429242563655 32-33 25.146660289303018 24.728643721732716 24.83596446651089 25.28873152245338 34-35 25.31932608915869 24.719495526354144 25.00855249814327 24.952625886343895 36-37 25.331605672387685 24.654036787406746 24.946575384814775 25.067782155390795 38-39 25.36098750253233 24.681788934993044 24.933067063138946 25.024156499335685 40-41 25.379128040800147 24.554177463531648 25.035505753960617 25.031188741707584 42-43 25.218277414553867 24.53011297204019 24.99717246646679 25.25443714693915 44-45 25.10392624971738 24.553506647646678 25.052272401531695 25.290294701104248 46-47 25.270027898969232 24.586575976686852 24.974429908075482 25.168966216268434 48-49 25.09890258138449 24.6148382027016 24.958603324838315 25.327655891075594 50-51 25.038394297360213 24.74651590790718 25.001994943171983 25.213094851560626 52-53 25.213637495594416 24.643006366034818 24.965565106687993 25.177791031682776 54-55 24.973803943759336 24.432429926338987 25.09702924128509 25.49673688861659 56-57 25.093998285266817 24.622000888570575 25.027355492123966 25.25664533403864 58-59 25.180818076146487 24.543896553204874 25.02499588788113 25.250289482767514 60-61 25.21744874946487 24.48320322708962 25.05233862415462 25.24700939929089 62-63 25.039373740943 24.542653140040052 25.060971903962397 25.357001215054552 64-65 24.987714754049154 24.399152284595097 25.10766214481448 25.50547081654127 66-67 24.939917872645218 24.66648955955036 24.917083245002768 25.476509322801654 68-69 24.976769044941037 24.43826587899622 24.99092433366246 25.59404074240029 70-71 24.914715587091017 24.324349630646 25.129217794089477 25.63171698817351 72-73 24.970374415506523 24.435192496244355 24.915058954225604 25.67937413402352 74-75 24.711618837193935 24.495391958690877 25.029615716980548 25.76337348713464 76-77 24.829949066431336 24.257917090951757 25.163607086281363 25.748526756335536 78-79 24.75667617355784 24.199310454244625 25.208648777890403 25.835364594307137 80-81 24.70526645677655 24.402712929075676 25.12176514547103 25.770255468676744 82-83 24.691183294767 24.386322777703235 25.15605955040169 25.76643437712808 84-85 24.76560121641193 24.369931477630942 25.003297309744482 25.861169996212645 86-87 24.489114618639007 24.36946617579897 25.23617693234877 25.905242273213254 88-89 24.50504418697048 24.236161072752502 25.1486992673088 26.110095472968215 90-91 24.483861906088936 24.23282960755336 25.17059342742184 26.112715058935866 92-93 24.504429098701337 24.26114209982477 25.206243445073223 26.02818535640067 94-95 24.448773648912926 24.128783300476762 25.18924441968821 26.233198630922104 96-97 24.242152066594606 24.132706315863764 25.318504815925053 26.306636801616577 98-99 24.276430407095166 24.09933657789911 25.24301741199782 26.381215603007906 100-101 24.60852950534943 23.736978006838182 25.318052481045967 26.33644000676642 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 53.0 1 48.5 2 52.5 3 77.0 4 86.5 5 87.0 6 155.0 7 355.0 8 525.5 9 529.5 10 468.0 11 423.0 12 431.0 13 457.5 14 519.0 15 592.0 16 660.0 17 755.5 18 848.0 19 952.0 20 1016.5 21 1096.5 22 1255.5 23 1458.0 24 1662.5 25 2016.5 26 2436.5 27 2998.5 28 3851.5 29 5098.0 30 7252.0 31 10842.5 32 16735.0 33 25190.0 34 35645.0 35 48520.0 36 65785.0 37 83307.0 38 98803.0 39 114798.5 40 130249.0 41 144542.0 42 161116.5 43 182784.5 44 205290.0 45 227448.5 46 248675.0 47 268395.5 48 289179.0 49 306238.0 50 316756.0 51 324701.0 52 331673.0 53 336954.5 54 338776.5 55 334105.5 56 319776.0 57 296052.5 58 271109.0 59 245345.0 60 213045.0 61 176410.5 62 140829.5 63 108457.5 64 79240.0 65 56550.0 66 40522.5 67 28973.5 68 20664.0 69 14598.5 70 10383.0 71 7438.5 72 5243.0 73 3758.0 74 2753.5 75 1904.0 76 1235.0 77 747.0 78 418.0 79 211.0 80 111.5 81 66.0 82 38.0 83 22.0 84 13.0 85 5.5 86 3.5 87 4.0 88 2.0 89 1.0 90 0.5 91 0.5 92 0.5 93 0.0 94 0.5 95 1.0 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.24069047858181605 2 0.0 3 5.942974779797927E-5 4 0.01369855686743422 5 0.015392304679676632 6 0.10848900460521116 7 0.13780272770656443 8 0.1550967843157764 9 0.11205478947308992 10-11 0.12104353882753428 12-13 0.09534017290490825 14-15 0.11900806996545349 16-17 0.07345516827830238 18-19 0.07875184455079728 20-21 0.05502451774245405 22-23 0.08103246112254474 24-25 0.0737077447064438 26-27 0.05136958825287834 28-29 0.01860151106076751 30-31 0.03213663612175729 32-33 0.03971392896599965 34-35 0.04560490271647434 36-37 0.03660872464355523 38-39 0.039119631488019856 40-41 0.02146899639202001 42-43 0.032047491500060324 44-45 0.018192931544656406 46-47 0.030784609359353263 48-49 3.417210498383808E-4 50-51 0.01665518682038369 52-53 0.00808244570052518 54-55 0.01623174986732309 56-57 0.010786499225333238 58-59 0.00785958414628276 60-61 0.031148616564615882 62-63 0.013327120943696851 64-65 0.015139728251535218 66-67 0.05957832216747422 68-69 0.07777125371213063 70-71 0.03368180956450475 72-73 0.05593082139637324 74-75 0.04771465876330261 76-77 0.2217843900635839 78-79 0.07932385587335283 80-81 0.016090604216302887 82-83 0.009999055067010012 84-85 0.02474506123938362 86-87 0.17510232316827115 88-89 0.3787457827165219 90-91 0.27562774156855313 92-93 0.27641518572687634 94-95 0.0017903211524141255 96-97 0.005363534738767629 98-99 0.004538946988070666 100-101 0.005044099844353491 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6730636.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.567751473424515 #Duplication Level Percentage of deduplicated Percentage of total 1 73.11206057347296 34.777763270689206 2 13.105387114565833 12.46787594457375 3 5.0615470557825235 7.222992372615199 4 2.5896613196332368 4.927374642106174 5 1.4821193094901794 3.5250541483896205 6 0.9495186689591787 2.7099880838656234 7 0.6398540790339252 2.1305493867519876 8 0.47161666304355215 1.7946995374705184 9 0.3564800568857675 1.5261259276056978 >10 2.0079262272048966 17.728964720068912 >50 0.15175443576202374 4.935058853160214 >100 0.07047130588299466 5.699567567666387 >500 0.0013517227307729175 0.4003369175173185 >1k 2.514675521666125E-4 0.15364862751935995 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.457231084848445E-5 2 0.0 0.0 0.0 0.0 5.942974779797927E-5 3 0.0 0.0 0.0 0.0 5.942974779797927E-5 4 0.0 0.0 0.0 0.0 7.428718474747409E-5 5 0.0 1.4857436949494818E-5 0.0 0.0 7.428718474747409E-5 6 0.0 1.4857436949494818E-5 0.0 0.0 1.3371693254545335E-4 7 0.0 1.4857436949494818E-5 0.0 1.4857436949494818E-5 1.4857436949494818E-4 8 0.0 1.4857436949494818E-5 0.0 1.4857436949494818E-5 2.0800411729292746E-4 9 0.0 1.4857436949494818E-5 0.0 2.9714873898989635E-5 2.525764281414119E-4 10-11 0.0 2.2286155424242225E-5 0.0 5.942974779797927E-5 2.525764281414119E-4 12-13 0.0 2.9714873898989635E-5 0.0 5.942974779797927E-5 4.5315182695959195E-4 14-15 0.0 2.9714873898989635E-5 0.0 7.428718474747409E-5 5.942974779797927E-4 16-17 1.4857436949494818E-5 2.9714873898989635E-5 0.0 1.1143077712121113E-4 7.725867213737305E-4 18-19 1.4857436949494818E-5 2.9714873898989635E-5 0.0 1.4857436949494818E-4 8.617313430706994E-4 20-21 1.4857436949494818E-5 2.9714873898989635E-5 0.0 1.4857436949494818E-4 9.285898093434261E-4 22-23 1.4857436949494818E-5 2.9714873898989635E-5 0.0 1.782892433939378E-4 0.0010251631495151424 24-25 1.4857436949494818E-5 4.457231084848445E-5 0.0 3.491497683131282E-4 0.001144022645111101 26-27 1.4857436949494818E-5 4.457231084848445E-5 0.0 6.314410703535298E-4 0.0012480247037575647 28-29 1.4857436949494818E-5 4.457231084848445E-5 0.0 0.0022137581054747276 0.0012925970146060492 30-31 1.4857436949494818E-5 4.457231084848445E-5 0.0 0.007985872360353464 0.0013223118885050387 32-33 1.4857436949494818E-5 4.457231084848445E-5 0.0 0.020867270195565474 0.0014486001025757447 34-35 1.4857436949494818E-5 5.942974779797927E-5 0.0 0.0378418919103633 0.0015748883166464506 36-37 1.4857436949494818E-5 8.91446216969689E-5 0.0 0.06728190322578728 0.0015748883166464506 38-39 1.4857436949494818E-5 1.0400205864646373E-4 0.0 0.11989951618242317 0.0016046031905454401 40-41 1.4857436949494818E-5 1.0400205864646373E-4 0.0 0.18227846521487717 0.0016343180644444299 42-43 1.4857436949494818E-5 1.0400205864646373E-4 0.0 0.24621744512702815 0.001671461656818167 44-45 2.9714873898989635E-5 1.0400205864646373E-4 0.0 0.32454585272476477 0.0017160339676666513 46-47 2.9714873898989635E-5 1.0400205864646373E-4 0.0 0.4187568604215114 0.0017754637154646308 48-49 3.7143592373737045E-5 1.0400205864646373E-4 0.0 0.5248686751148034 0.0019166093664848315 50-51 4.457231084848445E-5 1.1143077712121114E-4 0.0 0.6444858999951862 0.001946324240383821 52-53 4.457231084848445E-5 1.1885949559595854E-4 0.0 0.7647048510720236 0.0021023273283535164 54-55 4.457231084848445E-5 1.1885949559595854E-4 0.0 0.8990309385324061 0.002288045290222202 56-57 4.457231084848445E-5 1.1885949559595854E-4 0.0 1.0592981109066066 0.002362332474969676 58-59 4.457231084848445E-5 1.1885949559595854E-4 0.0 1.2405068406611202 0.002414333504292908 60-61 4.457231084848445E-5 1.3371693254545335E-4 0.0 1.4422262621244113 0.0024960494075151295 62-63 4.457231084848445E-5 1.3371693254545335E-4 0.0 1.6502378081358136 0.002600051466161593 64-65 4.457231084848445E-5 1.3371693254545335E-4 0.0 1.8687535620705087 0.0026594812139595723 66-67 4.457231084848445E-5 1.3371693254545335E-4 0.0 2.119428238282385 0.002711482243282804 68-69 4.457231084848445E-5 1.3371693254545335E-4 0.0 2.4096311254983926 0.002763483272606036 70-71 4.457231084848445E-5 1.3371693254545335E-4 0.0 2.7311832046778344 0.002845199175828258 72-73 5.942974779797927E-5 1.3371693254545335E-4 0.0 3.0634474958978615 0.0030457745746464374 74-75 5.942974779797927E-5 1.3371693254545335E-4 0.0 3.409239483460404 0.003149776633292901 76-77 5.942974779797927E-5 1.3371693254545335E-4 0.0 3.7878515492443805 0.003149776633292901 78-79 5.942974779797927E-5 1.3371693254545335E-4 0.0 4.211147356653963 0.003194348944141386 80-81 5.942974779797927E-5 1.3371693254545335E-4 0.0 4.67413480687412 0.0033132084397373444 82-83 5.942974779797927E-5 1.3371693254545335E-4 0.0 5.1488522035659035 0.0035434987124545137 84-85 7.428718474747409E-5 1.3371693254545335E-4 0.0 5.633732087131142 0.0035732135863535035 86-87 7.428718474747409E-5 1.3371693254545335E-4 0.0 6.144894776660037 0.0036846443634747147 88-89 7.428718474747409E-5 1.3371693254545335E-4 0.0 6.7095888115179605 0.0038480761699191575 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9470 0.0 38.643024 1 GGTATCA 6020 0.0 37.15319 1 TCAACGC 11660 0.0 30.829529 4 CAACGCA 12100 0.0 29.786726 5 TATCAAC 12480 0.0 29.030876 2 AACGCAG 13115 0.0 27.694996 6 ATCAACG 13060 0.0 27.63376 3 GTACATG 22055 0.0 25.331202 1 TACATGG 23610 0.0 22.827065 2 ACGCAGA 16775 0.0 21.369413 7 ACATGGG 24315 0.0 21.170183 3 CGCAGAG 17645 0.0 19.992878 8 CATGGGG 18495 0.0 18.280802 4 GAGTACA 17775 0.0 17.910646 1 AGTACAT 16590 0.0 17.602684 2 GCAGAGT 19760 0.0 16.577978 9 TACACTG 6130 0.0 16.500057 5 AGAGTAC 16035 0.0 16.080412 5 CAGAGTA 18025 0.0 15.358997 4 GTATTAG 1445 0.0 15.149028 1 >>END_MODULE