##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921565_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4468285 Sequences flagged as poor quality 0 Sequence length 98 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.737455421934815 31.0 28.0 31.0 16.0 34.0 2 27.69105641202385 31.0 28.0 33.0 15.0 34.0 3 27.774258580193518 31.0 28.0 33.0 16.0 34.0 4 31.15700856145031 35.0 32.0 37.0 16.0 37.0 5 31.064286185863256 35.0 32.0 37.0 16.0 37.0 6 31.159373227088246 35.0 32.0 37.0 16.0 37.0 7 30.96107074638256 35.0 32.0 37.0 11.0 37.0 8 30.900324173592328 35.0 32.0 37.0 11.0 37.0 9 32.0805416395776 37.0 32.0 39.0 10.0 39.0 10-11 31.831557073910908 37.0 31.0 39.0 10.0 39.0 12-13 31.586233644451955 37.0 31.0 39.0 10.0 39.0 14-15 32.220094734333195 37.0 31.0 40.0 8.0 41.0 16-17 32.039939260812595 37.0 31.0 40.0 7.5 41.0 18-19 31.852406012597676 37.0 30.0 40.0 2.0 41.0 20-21 31.704875919955867 37.0 30.0 40.0 2.0 41.0 22-23 31.492033968289846 37.0 30.0 40.0 2.0 41.0 24-25 31.580434887210643 37.0 30.0 40.0 2.0 41.0 26-27 31.31115741274337 37.0 30.0 40.0 2.0 41.0 28-29 31.08892349078002 37.0 30.0 40.0 2.0 41.0 30-31 30.810783555659498 36.0 29.0 40.0 2.0 41.0 32-33 30.533398943890106 36.0 28.5 39.5 2.0 41.0 34-35 30.1926479622495 36.0 27.5 39.0 2.0 41.0 36-37 29.883062629174283 35.0 27.0 39.0 2.0 40.0 38-39 29.6500962897398 35.0 26.0 39.0 2.0 40.0 40-41 29.4029642245291 35.0 26.0 39.0 2.0 40.0 42-43 29.134602201963393 35.0 25.0 39.0 2.0 40.0 44-45 28.85872376090603 35.0 24.5 39.0 2.0 40.0 46-47 28.53019547768327 34.5 24.0 38.5 2.0 40.0 48-49 28.214230515734783 34.0 23.0 38.0 2.0 40.0 50-51 27.311896958228942 33.0 22.5 37.5 2.0 39.5 52-53 27.52519803459269 33.5 23.0 37.5 2.0 39.5 54-55 28.076568750650416 34.0 23.0 38.0 2.0 40.0 56-57 28.043513450910137 34.0 23.0 38.5 2.0 40.0 58-59 27.780542646675404 34.0 22.5 38.0 2.0 40.0 60-61 27.399026136425945 34.0 22.0 38.0 2.0 40.0 62-63 26.92421644993549 33.0 20.5 37.5 2.0 40.0 64-65 26.462397317986657 33.0 18.5 37.0 2.0 39.5 66-67 26.109083574570555 33.0 18.0 36.0 2.0 39.0 68-69 25.644219874068014 32.0 14.5 36.0 2.0 39.0 70-71 25.208421799415213 32.0 10.0 35.0 2.0 38.5 72-73 24.72667533516774 31.5 7.5 35.0 2.0 37.5 74-75 24.27853180806506 31.0 4.5 35.0 2.0 37.0 76-77 23.856853020789856 31.0 2.0 35.0 2.0 36.0 78-79 23.462622795994434 31.0 2.0 34.0 2.0 36.0 80-81 23.03482700857264 30.5 2.0 34.0 2.0 35.0 82-83 22.493962224880462 30.0 2.0 34.0 2.0 35.0 84-85 22.086628874389167 30.0 2.0 34.0 2.0 35.0 86-87 21.5896094362826 29.0 2.0 34.0 2.0 35.0 88-89 21.087171028705647 29.0 2.0 34.0 2.0 35.0 90-91 20.485092490743092 29.0 2.0 34.0 2.0 35.0 92-93 19.909143888538892 27.0 2.0 34.0 2.0 35.0 94-95 19.205057980858427 26.5 2.0 33.0 2.0 35.0 96-97 18.558884337055495 25.0 2.0 33.0 2.0 35.0 98 18.094852723136505 25.0 2.0 33.0 2.0 34.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 330143.0 3 54098.0 4 40217.0 5 31641.0 6 28776.0 7 30318.0 8 33668.0 9 38195.0 10 39933.0 11 41797.0 12 41590.0 13 40779.0 14 39750.0 15 41418.0 16 43616.0 17 46998.0 18 48830.0 19 48502.0 20 50753.0 21 54184.0 22 58107.0 23 64674.0 24 72085.0 25 81945.0 26 93810.0 27 106548.0 28 122618.0 29 141043.0 30 160852.0 31 188069.0 32 221531.0 33 266367.0 34 322992.0 35 380857.0 36 449986.0 37 426417.0 38 175146.0 39 10032.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.84444095265887 16.611618667085683 12.783160115827515 24.760780264427932 2 16.736228756817912 18.633735256762666 39.63938725596212 24.990648730457306 3 21.345149617074146 23.15329292925671 26.864960844590573 28.63659660907857 4 14.77980261565629 14.079478123683431 33.911898636595886 37.2288206240644 5 15.84099598570684 37.12004381347542 31.197314363030674 15.84164583778706 6 35.507939034911246 31.268913326333937 17.37882092574344 15.844326713011384 7 31.947880513313986 31.012093121558554 18.285702515568097 18.754323849559366 8 29.34310735569794 33.498156179177975 18.48082594219524 18.67791052292885 9 29.99107173432848 15.972485990411906 17.599673040599324 36.4367692346603 10-11 28.214095561054663 24.411390624548897 24.929485043309377 22.445028771087067 12-13 28.137674497720177 21.045847669064642 25.76982667310504 25.04665116011014 14-15 25.70746706283591 22.626434224993915 23.312377770876523 28.35372094129365 16-17 25.8395928888495 25.62108197259202 23.97020883537912 24.569116303179364 18-19 25.801975877160327 25.511179817629426 25.23722202996787 23.449622275242376 20-21 26.210103295169336 24.43565813272058 25.349058187808645 24.005180384301447 22-23 26.24128783746153 23.593536438463698 25.124665890484888 25.04050983358988 24-25 25.656638776804463 23.886903777343687 24.95232391316496 25.504133532686886 26-27 25.1286057402887 24.315358041449738 25.291038001846864 25.264998216414696 28-29 25.06833388539623 25.521189749485924 24.551896506858927 24.858579858258924 30-31 26.680486586614165 24.488707759089902 24.582400992704784 24.24840466159115 32-33 26.051839537689897 24.33342074622404 24.68167325509152 24.933066460994542 34-35 25.909911261053075 24.80133955408143 24.940764179411428 24.347985005454063 36-37 25.688375034440664 24.826201063356887 25.13136893827469 24.35405496392776 38-39 26.0157831671903 24.871501860930064 24.636651622187557 24.476063349692083 40-41 26.079306089965904 24.448534388007094 24.58639306853788 24.885766453489122 42-43 25.54146122125285 24.568776594388737 24.27691281111315 25.61284937324527 44-45 24.915221105534975 24.542073831601826 25.20360913378835 25.339095929074844 46-47 25.139687825976626 24.08385199524362 24.838326822690053 25.938133356089704 48-49 25.045887360732365 24.591044475821953 24.968281919728668 25.394786243717014 50-51 25.287830863319115 24.29000447882238 25.316911209170883 25.10525344868762 52-53 25.34255231170365 24.48425765195537 24.978277526656438 25.194912509684542 54-55 24.38467784226974 23.907246141105794 25.947599211659817 25.76047680496465 56-57 24.959201888773993 24.120252124017274 25.10112496327833 25.8194210239304 58-59 25.13823450554218 24.392215035045904 25.37843829140714 25.091112168004777 60-61 26.10786915029436 24.174306827356133 25.374526010606584 24.343298011742924 62-63 25.546093652627643 24.137553910951066 25.51231825230269 24.8040341841186 64-65 24.97310862498318 23.761755781617552 25.704280001823832 25.56085559157544 66-67 25.19254753830647 24.115494487015614 25.224078549173605 25.467879425504307 68-69 24.58788218156977 24.19933552728276 25.53745454333136 25.675327747816105 70-71 24.78704801093267 23.96478538215736 25.532057241602423 25.716109365307542 72-73 24.57344257985995 24.82764356283626 24.983358359861004 25.61555549744278 74-75 24.518657860796615 24.540439495254105 25.44340663416292 25.497496009786364 76-77 24.367364440928633 23.758556556344693 25.486830279062943 26.38724872366373 78-79 24.30552017161467 23.945370886425145 25.84254618923 25.90656275273019 80-81 24.84112693214675 24.235843828924537 25.126643970140055 25.796385268788658 82-83 24.859642032611195 24.359824575127103 25.34792221949253 25.43261117276917 84-85 24.828822580808062 24.623658810023198 24.86852662965594 25.6789919795128 86-87 24.22354477345637 24.95817714755354 25.148899229705425 25.66937884928467 88-89 24.0458920510432 24.179081995101402 25.552164134549905 26.222861819305493 90-91 24.97717922929426 23.563054569417453 25.746576435497744 25.71318976579055 92-93 25.2103222253305 23.741306776733417 25.346862091032634 25.70150890690344 94-95 24.920229090178978 24.094321981216364 25.107003734931745 25.878445193672917 96-97 24.224718919539516 23.968758126084623 25.507564294058515 26.298958660317346 98 24.19127268972731 23.766264665414198 25.201730109242888 26.8407325356156 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 115.0 1 113.0 2 174.0 3 267.0 4 275.5 5 308.0 6 478.5 7 825.0 8 1171.5 9 1399.5 10 1434.0 11 1410.5 12 1576.5 13 1803.5 14 2076.0 15 2367.0 16 2556.0 17 2635.5 18 2676.0 19 2600.5 20 2465.0 21 2403.5 22 2394.5 23 2400.5 24 2478.0 25 2820.0 26 3315.0 27 3811.0 28 4623.0 29 6138.5 30 8548.0 31 12165.0 32 17827.0 33 24418.0 34 32241.5 35 41766.5 36 51082.5 37 59725.5 38 68459.0 39 75785.5 40 82571.5 41 90836.5 42 101719.0 43 117120.0 44 132815.5 45 149214.0 46 170510.5 47 193279.5 48 211583.5 49 226971.5 50 234952.0 51 237703.5 52 239902.5 53 239614.5 54 239763.5 55 233757.5 56 220759.0 57 205680.5 58 183930.5 59 156553.0 60 131057.5 61 107771.0 62 86795.5 63 67597.5 64 50724.0 65 37740.0 66 27853.5 67 20569.0 68 14988.0 69 10845.5 70 7777.0 71 5608.5 72 4185.5 73 3028.0 74 2116.5 75 1462.5 76 999.0 77 635.5 78 391.5 79 243.0 80 151.0 81 92.0 82 56.0 83 44.5 84 37.0 85 29.5 86 20.0 87 15.0 88 14.0 89 10.5 90 8.0 91 8.5 92 8.0 93 9.0 94 9.5 95 6.0 96 4.0 97 5.0 98 6.5 99 4.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.2995556460700246 2 0.1415308110382395 3 0.13862141738944586 4 0.1326012105315574 5 0.12825950000951147 6 0.04896733310431183 7 0.039813933086184077 8 0.014770767755413989 9 0.010115737917344127 10-11 0.0018799158961435988 12-13 0.006322336198340079 14-15 0.01113402569442191 16-17 0.0070720645616830615 18-19 0.05076891917144945 20-21 0.10123570900244724 22-23 0.10191829751235652 24-25 0.07878861800444689 26-27 0.08868055641034536 28-29 0.10571169923136058 30-31 0.08314151850206511 32-33 0.021943542097247602 34-35 0.31926119305281553 36-37 0.41633423114237345 38-39 0.38382735210489033 40-41 0.380179420068326 42-43 0.35506911488412224 44-45 0.3375679930890711 46-47 0.3428608515347611 48-49 0.33545308770590954 50-51 0.33806035201425155 52-53 0.3860429672682025 54-55 0.37270451638604074 56-57 0.3552369645177065 58-59 0.3353188079990421 60-61 0.34442744811488074 62-63 0.34330845055765247 64-65 0.36063053274354706 66-67 0.38295453401025226 68-69 0.3419768434645507 70-71 0.3158258705521246 72-73 0.2986716379998142 74-75 0.28414704970699045 76-77 0.2877278418901211 78-79 0.295146795694545 80-81 0.2838673003176834 82-83 0.2944865871357803 84-85 0.28691097367334445 86-87 0.2816964450566604 88-89 0.30760123850649634 90-91 0.28901468908093375 92-93 0.2784849220674151 94-95 0.29504608591439446 96-97 0.29341234948084105 98 0.29261786121520894 >>END_MODULE >>Sequence Length Distribution pass #Length Count 98 4468285.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.68379351031048 #Duplication Level Percentage of deduplicated Percentage of total 1 78.97836843095915 40.81901685766916 2 10.31181663773989 10.659076036422652 3 3.8711297918065726 6.002240184340262 4 1.9358574424421804 4.002098252823175 5 1.1070742306200043 2.8608897967975073 6 0.7287848102141876 2.259981818673653 7 0.4937956459393749 1.7864862540714725 8 0.37274817863267523 1.5412031916636408 9 0.27777451047273144 1.2920796397530203 >10 1.7227622157460178 16.642035146024455 >50 0.13363470447275383 4.768399942222789 >100 0.0624479679379199 5.474936376927957 >500 0.0027119180263170677 0.918785847766148 >1k 0.0010497743905932137 0.8487271367605927 >5k 4.3740599608037536E-5 0.12404351808338321 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5487 0.12279879193023721 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 4.4759902289133304E-5 9 0.0 0.0 0.0 2.2379951144566652E-5 4.4759902289133304E-5 10-11 0.0 0.0 0.0 3.3569926716849977E-5 6.713985343369995E-5 12-13 0.0 0.0 0.0 8.951980457826661E-5 1.1189975572283325E-4 14-15 0.0 0.0 0.0 1.1189975572283325E-4 1.4546968243968323E-4 16-17 0.0 0.0 0.0 1.2308973129511659E-4 1.6784963358424987E-4 18-19 0.0 0.0 0.0 1.342797068673999E-4 1.7903960915653322E-4 20-21 0.0 0.0 0.0 1.4546968243968323E-4 1.7903960915653322E-4 22-23 0.0 0.0 0.0 2.685594137347998E-4 1.7903960915653322E-4 24-25 0.0 0.0 0.0 3.804591694576331E-4 1.7903960915653322E-4 26-27 0.0 0.0 0.0 9.063880213549494E-4 2.1260953587338318E-4 28-29 0.0 0.0 0.0 0.002808683868643115 2.237995114456665E-4 30-31 0.0 2.2379951144566652E-5 0.0 0.01086546628068711 2.3498948701794985E-4 32-33 0.0 2.2379951144566652E-5 0.0 0.02964224529097853 3.356992671684998E-4 34-35 0.0 2.2379951144566652E-5 0.0 0.05602820769042261 3.5807921831306643E-4 36-37 0.0 2.2379951144566652E-5 0.0 0.10017266132308034 3.804591694576331E-4 38-39 0.0 2.2379951144566652E-5 0.0 0.18123284436870074 3.916491450299164E-4 40-41 0.0 2.2379951144566652E-5 0.0 0.2799619988429565 4.028391206021997E-4 42-43 0.0 2.2379951144566652E-5 0.0 0.37286117604405267 4.2521907174676636E-4 44-45 0.0 2.2379951144566652E-5 0.0 0.481090619779177 4.47599022891333E-4 46-47 0.0 2.2379951144566652E-5 0.0 0.6028711239323364 4.47599022891333E-4 48-49 0.0 2.2379951144566652E-5 0.0 0.7398028550103675 4.47599022891333E-4 50-51 0.0 2.2379951144566652E-5 0.0 0.8992600069154049 4.47599022891333E-4 52-53 0.0 2.2379951144566652E-5 0.0 1.0701868837820327 4.923589251804663E-4 54-55 0.0 2.2379951144566652E-5 0.0 1.2573392252284714 5.371188274695996E-4 56-57 0.0 2.2379951144566652E-5 0.0 1.4630445461737558 5.48308803041883E-4 58-59 0.0 2.2379951144566652E-5 0.0 1.701637205325981 5.706887541864496E-4 60-61 0.0 2.2379951144566652E-5 0.0 1.973128392660719 5.818787297587329E-4 62-63 0.0 2.2379951144566652E-5 0.0 2.273623996678815 6.042586809032996E-4 64-65 0.0 2.2379951144566652E-5 0.0 2.565839018773422 6.266386320478662E-4 66-67 0.0 2.2379951144566652E-5 0.0 2.8971406255420145 6.602085587647163E-4 68-69 0.0 2.2379951144566652E-5 0.0 3.2652124920411296 6.713985343369996E-4 70-71 0.0 2.2379951144566652E-5 0.0 3.6715205050707374 6.713985343369996E-4 72-73 0.0 3.3569926716849977E-5 0.0 4.0841396643231125 7.385383877706995E-4 74-75 0.0 4.4759902289133304E-5 1.1189975572283326E-5 4.499869636784583 7.385383877706995E-4 76-77 0.0 4.4759902289133304E-5 2.2379951144566652E-5 4.9629108259656665 7.497283633429828E-4 78-79 0.0 4.4759902289133304E-5 2.2379951144566652E-5 5.482830660980667 7.609183389152662E-4 80-81 0.0 4.4759902289133304E-5 2.2379951144566652E-5 6.024772367921921 7.832982900598328E-4 82-83 0.0 4.4759902289133304E-5 2.2379951144566652E-5 6.5910746516840355 8.728180946380994E-4 84-85 0.0 5.594987786141663E-5 2.2379951144566652E-5 7.165556807589489 8.728180946380994E-4 86 0.0 6.713985343369995E-5 2.2379951144566652E-5 7.615628815082297 8.728180946380994E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 11320 0.0 37.320744 1 GGTATCA 7015 0.0 34.376183 1 GTACATG 26760 0.0 28.960762 1 TATCAAC 14670 0.0 28.435402 2 TCAACGC 14940 0.0 28.043882 4 TACATGG 27930 0.0 27.584541 2 CAACGCA 15225 0.0 27.397612 5 ATCAACG 15505 0.0 26.992943 3 AACGCAG 16040 0.0 26.065443 6 ACATGGG 29330 0.0 25.656977 3 CATGGGG 24195 0.0 24.266052 4 ATGGGGG 17020 0.0 23.914335 5 TGGGGGG 15565 0.0 22.467615 6 GTAAGTA 4730 0.0 22.436468 2 ATATGTA 2450 0.0 21.977274 1 ACGCAGA 18850 0.0 21.639595 7 TGTAAGT 4770 0.0 21.322 1 TATGTAA 2660 0.0 20.725416 2 CGCAGAG 19635 0.0 20.677505 8 TACCTGG 3410 0.0 20.47825 2 >>END_MODULE