##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921563_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6316348 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.00167232711054 31.0 30.0 34.0 26.0 34.0 2 29.983792374960974 31.0 30.0 34.0 26.0 34.0 3 30.164194721380138 31.0 30.0 34.0 26.0 34.0 4 33.816124127422995 35.0 35.0 37.0 30.0 37.0 5 33.30869261794949 35.0 33.0 37.0 27.0 37.0 6 33.19338263186259 35.0 33.0 37.0 27.0 37.0 7 32.99830091692225 35.0 33.0 37.0 26.0 37.0 8 32.89325192342157 35.0 33.0 37.0 26.0 37.0 9 34.20247744424468 37.0 34.0 39.0 26.0 39.0 10-11 33.988950418817964 37.0 33.0 39.0 25.0 39.0 12-13 33.80850120987634 37.0 33.0 39.0 25.0 39.0 14-15 34.66322849849311 38.0 33.0 40.0 25.0 41.0 16-17 34.51822920459734 38.0 33.0 40.0 24.0 41.0 18-19 34.38760965988575 38.0 33.0 40.0 23.5 41.0 20-21 34.249017391062054 38.0 33.0 40.0 22.0 41.0 22-23 34.073750527994974 38.0 33.0 40.0 21.0 41.0 24-25 33.91477519921322 38.0 33.0 40.0 19.0 41.0 26-27 33.82216400996272 38.0 32.5 40.0 19.0 41.0 28-29 33.824638066173684 38.0 33.0 40.0 19.0 41.0 30-31 33.66644348918078 38.0 32.0 40.0 18.0 41.0 32-33 33.49218852412818 38.0 32.0 40.0 17.5 41.0 34-35 33.281098824827254 38.0 32.0 40.0 16.0 41.0 36-37 33.10885673176969 38.0 32.0 40.0 16.0 41.0 38-39 32.926734799919195 38.0 31.0 40.0 15.0 41.0 40-41 32.931633912507664 38.0 32.0 40.0 15.0 41.0 42-43 32.726975302817394 37.5 31.0 40.0 11.0 41.0 44-45 32.519476523459446 37.0 31.0 40.0 9.0 41.0 46-47 32.245663633479346 37.0 31.0 40.0 8.0 41.0 48-49 31.95443435035562 37.0 30.0 40.0 7.0 41.0 50-51 31.682940917758174 36.5 30.0 40.0 4.0 41.0 52-53 31.36034176710973 36.0 30.0 39.5 2.0 41.0 54-55 31.047244230368563 36.0 29.0 39.0 2.0 40.5 56-57 30.70163273144545 35.0 28.5 39.0 2.0 40.0 58-59 30.23134135421291 35.0 28.0 39.0 2.0 40.0 60-61 29.886989681379177 35.0 28.0 38.0 2.0 40.0 62-63 29.560941702388785 34.0 27.5 38.0 2.0 40.0 64-65 29.117133666479425 34.0 26.5 37.5 2.0 40.0 66-67 28.703652094533105 34.0 26.0 37.0 2.0 39.5 68-69 28.284158820888273 34.0 26.0 36.5 2.0 39.0 70-71 27.831284549236365 33.0 26.0 36.0 2.0 39.0 72-73 27.36913426872617 33.0 25.0 35.5 2.0 38.5 74-75 26.85417499162491 32.5 24.0 35.0 2.0 37.0 76-77 25.354122904564473 30.5 21.5 34.0 2.0 36.0 78-79 26.241384261918437 32.0 23.5 35.0 2.0 36.0 80-81 26.30933602771728 32.0 24.0 35.0 2.0 36.0 82-83 26.011111484041095 32.0 23.0 35.0 2.0 35.5 84-85 25.61401897108899 32.0 20.5 35.0 2.0 35.0 86-87 25.197126804919552 32.0 19.5 34.5 2.0 35.0 88-89 24.77694634621145 31.5 18.5 34.0 2.0 35.0 90-91 24.37992309796737 31.0 14.5 34.0 2.0 35.0 92-93 23.98846303275247 31.0 8.5 34.0 2.0 35.0 94-95 23.63006241898008 31.0 2.0 34.0 2.0 35.0 96-97 23.125955852970737 31.0 2.0 34.0 2.0 35.0 98-99 22.400312728177738 31.0 2.0 34.0 2.0 35.0 100-101 19.83653964284425 26.5 2.0 32.5 2.0 34.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 174203.0 3 79919.0 4 42143.0 5 30275.0 6 26111.0 7 25990.0 8 29171.0 9 33187.0 10 37673.0 11 41970.0 12 46054.0 13 50136.0 14 52908.0 15 56021.0 16 57998.0 17 59852.0 18 58661.0 19 57383.0 20 57412.0 21 59993.0 22 64565.0 23 72720.0 24 84297.0 25 99609.0 26 118264.0 27 139620.0 28 163898.0 29 192289.0 30 225170.0 31 265557.0 32 318224.0 33 386912.0 34 480724.0 35 613356.0 36 784170.0 37 832743.0 38 380005.0 39 17165.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.78598974527286 18.47304646527424 13.523340082105745 25.21762370734716 2 16.285375663278845 20.507103155177646 37.436806838381926 25.77071434316159 3 19.652840313953767 23.917490877634275 28.479940294575467 27.949728513836487 4 14.63193536404278 16.154365755077908 34.51025367136759 34.70344520951172 5 15.342331399475912 36.54113298741465 33.05705441513441 15.05948119797503 6 34.45800794792249 33.88076531441046 16.859342374788525 14.801884362878525 7 30.208949952139548 30.916187612973022 20.200661961260778 18.674200473626655 8 27.45718745713989 33.63766885396921 19.593632642577006 19.311511046313893 9 27.53141144347145 15.576566958565866 18.61269479405923 38.27932680390346 10-11 26.42213046544988 24.72979655885686 26.830011333106143 22.01806164258712 12-13 27.05329668745006 21.974004854776638 26.78307978181078 24.189618675962517 14-15 24.405387233351888 23.439649684961193 24.14474635223228 28.01021672945464 16-17 24.616858146495534 26.34011323387663 24.841164899526163 24.201863720101674 18-19 24.64826539968986 25.80414276066536 26.07848628222978 23.469105557415006 20-21 25.3009729422345 24.991068129716655 25.788224187370083 23.91973474067876 22-23 25.12041097660418 24.65360528649284 25.613890598536255 24.612093138366724 24-25 24.84581893525829 24.885497973113313 25.593177455208792 24.675505636419608 26-27 24.633882494082478 25.065570536330835 25.69788458049152 24.60266238909517 28-29 24.709270540842578 25.36888622159974 25.463618092401774 24.458225145155907 30-31 25.111106887969825 25.103616091118496 25.253004435090187 24.53227258582149 32-33 24.832260365615703 25.097593393171184 25.238970774564013 24.831175466649096 34-35 25.018222330487976 25.1264396908175 25.416215134053317 24.439122844641208 36-37 25.054106833587564 25.005588657246996 25.403513723231956 24.536790785933484 38-39 25.011434931911474 25.0485192713446 25.356161701974 24.583884094769928 40-41 25.034497196043837 24.908939120564572 25.395724089573314 24.660839593818277 42-43 24.84184652437684 24.8541516613677 25.299219122657984 25.004782691597477 44-45 24.72259328016701 24.926004817524998 25.4628459627101 24.88855593959789 46-47 24.800517857779152 24.80117507789642 25.420260591735655 24.978046472588776 48-49 24.652879641247086 24.956149343170278 25.371382884826225 25.019588130756414 50-51 24.673790781941758 24.928774285919907 25.44879622308357 24.948638709054766 52-53 24.692906845586236 24.87902630783953 25.430861409320954 24.997205437253278 54-55 24.366062366098788 24.71380570013412 25.654870956044775 25.26526097772232 56-57 24.466845365245106 24.78794387857617 25.453630125609934 25.291580630568795 58-59 24.52375521971056 24.768995621883285 25.497053560621 25.210195597785155 60-61 24.703881807693616 24.654772264589738 25.529044074270857 25.112301853445786 62-63 24.424959619274 24.69019539663682 25.569910156150417 25.314934827938764 64-65 24.27130529897813 24.5254992377032 25.65977249298091 25.543422970337758 66-67 24.335112218005538 24.73359896476294 25.38761590221198 25.54367291501954 68-69 24.226241624620272 24.648410116675233 25.427850508735574 25.697497749968928 70-71 24.138923308095396 24.486839721369133 25.524380834372245 25.849856136163226 72-73 24.083507188499603 24.619388463314113 25.378611684160163 25.91849266402612 74-75 23.89863523983922 24.58123707019511 25.457806762962115 26.062320927003558 76-77 23.837179089783735 24.29711010330518 25.667946024669448 26.197764782241645 78-79 23.782783389366475 24.331513923173766 25.72824006232002 26.157462625139736 80-81 23.817168831063952 24.43227373704257 25.545989526622098 26.204567905271375 82-83 23.66093687432737 24.383421766349684 25.638341448291662 26.317299911031284 84-85 23.605076269219722 24.353710299137692 25.5391253721693 26.502088059473294 86-87 23.411723954499625 24.390591666321708 25.65096205590054 26.546722323278125 88-89 23.305193705089195 24.129397472487337 25.76862696858997 26.796781853833494 90-91 23.322519138505307 24.01146563959599 25.740718102755757 26.92529711914295 92-93 23.265363858871538 24.00759375867717 25.725627681339645 27.00141470111165 94-95 23.098911650841664 23.889661811044345 25.823517002066502 27.187909536047485 96-97 22.921025821926467 23.786063248088833 25.91612419914314 27.376786730841555 98-99 22.734935762705557 23.711964864032577 25.918412421717107 27.634686951544758 100-101 22.98609534431051 23.488579980981676 25.93842413902186 27.586900535685956 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 307.0 1 266.0 2 285.5 3 354.0 4 343.5 5 360.0 6 539.5 7 1114.5 8 1587.5 9 1570.5 10 1309.5 11 1112.5 12 1116.0 13 1167.5 14 1267.0 15 1356.0 16 1478.5 17 1627.0 18 1748.0 19 1895.0 20 2056.5 21 2281.0 22 2557.0 23 2827.0 24 3073.0 25 3469.5 26 4171.5 27 5010.0 28 6187.5 29 8025.0 30 10709.5 31 15100.0 32 22199.0 33 31233.0 34 41750.5 35 54471.5 36 70630.5 37 87485.5 38 103841.0 39 120136.5 40 134964.5 41 150365.0 42 167153.5 43 187336.0 44 208251.0 45 227795.0 46 247020.0 47 263958.5 48 280920.5 49 295063.0 50 301955.5 51 304953.0 52 307288.5 53 308002.5 54 304571.0 55 292929.5 56 273200.0 57 247789.5 58 223671.0 59 199788.5 60 170971.5 61 142663.5 62 115702.0 63 89608.0 64 66722.0 65 49091.0 66 36348.5 67 27302.0 68 20480.5 69 15143.0 70 11074.0 71 8038.0 72 5722.0 73 4105.5 74 2998.5 75 2106.5 76 1431.0 77 860.5 78 500.5 79 294.0 80 155.5 81 78.5 82 39.5 83 23.0 84 14.5 85 11.0 86 10.0 87 5.5 88 3.5 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.24458753697548016 2 0.0 3 6.33277330508072E-5 4 0.013520471006347339 5 0.015689445863337485 6 0.10327170067260386 7 0.13339986967152537 8 0.1502925424628282 9 0.10867038991518518 10-11 0.11712464227746794 12-13 0.09280679278595796 14-15 0.11531980188551993 16-17 0.07054709461859923 18-19 0.07497211996552439 20-21 0.05193665706829326 22-23 0.07824933015090366 24-25 0.07046793495228572 26-27 0.049213564547108554 28-29 0.018293798885051935 30-31 0.03060312699680258 32-33 0.037933312097433516 34-35 0.042207934078363006 36-37 0.03513897587656665 38-39 0.03739502636650165 40-41 0.021246454438545816 42-43 0.030270656398285842 44-45 0.016971832457616333 46-47 0.029653211001040475 48-49 3.641344650421414E-4 50-51 0.01642563076005312 52-53 0.008105949830503322 54-55 0.016750185391938507 56-57 0.010844874284950734 58-59 0.007987210331033058 60-61 0.02996984966629451 62-63 0.013219664274356004 64-65 0.014161664303486763 66-67 0.056852472346362176 68-69 0.07549457376319353 70-71 0.032360471588962485 72-73 0.053551514261088846 74-75 0.04640339639297898 76-77 0.22320651110420134 78-79 0.08000667474306355 80-81 0.015871513095858554 82-83 0.010211596954442662 84-85 0.023961630993099177 86-87 0.1782200727382342 88-89 0.3824045160272993 90-91 0.2775021262286372 92-93 0.2769163446979172 94-95 0.002066067290782585 96-97 0.005992386739932631 98-99 0.004955395111225664 100-101 0.005287865709742401 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 6316348.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.09612654716877 #Duplication Level Percentage of deduplicated Percentage of total 1 75.81447004132184 39.4964022537924 2 12.423817043867324 12.94465489832369 3 4.442712251294301 6.943442989682549 4 2.189344412638566 4.562254543046226 5 1.239538395376455 3.2287574552803164 6 0.774627830028873 2.4213065676085748 7 0.5480883486291623 1.9987295978449517 8 0.38897700113000067 1.621135605984538 9 0.2937113752235072 1.3771102474788124 >10 1.7100857347211027 16.66876268422954 >50 0.1279954984864951 4.549321477669677 >100 0.04589817515540227 3.809189258553871 >500 6.421577119102148E-4 0.23243990455869828 >1k 9.173441508970938E-5 0.14649251594618634 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.58319332627018E-5 0.0 3 0.0 0.0 0.0 1.58319332627018E-5 0.0 4 0.0 0.0 0.0 1.58319332627018E-5 0.0 5 0.0 1.58319332627018E-5 0.0 1.58319332627018E-5 0.0 6 0.0 1.58319332627018E-5 0.0 1.58319332627018E-5 7.915966631350901E-5 7 0.0 1.58319332627018E-5 0.0 1.58319332627018E-5 7.915966631350901E-5 8 0.0 1.58319332627018E-5 0.0 1.58319332627018E-5 9.499159957621081E-5 9 0.0 1.58319332627018E-5 0.0 3.16638665254036E-5 1.266554661016144E-4 10-11 0.0 1.58319332627018E-5 0.0 5.54117664194563E-5 1.5831933262701802E-4 12-13 0.0 1.58319332627018E-5 0.0 9.499159957621081E-5 2.6914286546593063E-4 14-15 0.0 2.3747899894052702E-5 0.0 1.108235328389126E-4 4.432941313556504E-4 16-17 0.0 3.16638665254036E-5 0.0 1.741512658897198E-4 5.066218644064576E-4 18-19 0.0 3.9579833156754506E-5 0.0 2.6914286546593063E-4 6.174453972453703E-4 20-21 0.0 6.33277330508072E-5 0.0 3.0872269862268514E-4 6.570252304021248E-4 22-23 0.0 6.33277330508072E-5 0.0 5.382857309318613E-4 7.045210301902301E-4 24-25 0.0 7.12436996821581E-5 0.0 0.0010211596954442662 7.757647298723883E-4 26-27 0.0 7.915966631350901E-5 0.0 0.0021214790572020416 8.470084295545465E-4 28-29 0.0 7.915966631350901E-5 0.0 0.006546504404127195 8.549243961858973E-4 30-31 0.0 7.915966631350901E-5 0.0 0.024563244457081843 8.628403628172482E-4 32-33 0.0 7.915966631350901E-5 0.0 0.0658450104395768 9.024201959740027E-4 34-35 0.0 7.915966631350901E-5 0.0 0.12174756679017687 9.657479290248099E-4 36-37 0.0 8.707563294485991E-5 0.0 0.20760414087380874 9.736638956561608E-4 38-39 0.0 9.499159957621081E-5 0.0 0.34508073336047984 0.0010053277621815643 40-41 0.0 9.499159957621081E-5 0.0 0.5011360995309315 0.0010290756620756172 42-43 0.0 1.5831933262701802E-4 0.0 0.6614581717156813 0.0010686554952323716 44-45 0.0 1.5831933262701802E-4 0.0 0.8521063120651364 0.0011398991949145296 46-47 7.9159666313509E-6 1.5831933262701802E-4 0.0 1.0731596802456103 0.0012190588612280388 48-49 1.58319332627018E-5 1.7415126588971982E-4 0.0 1.305912847107221 0.0012982185275415478 50-51 1.58319332627018E-5 1.8998319915242162E-4 0.0 1.5555349388602402 0.0013219664274356003 52-53 1.58319332627018E-5 2.137310990464743E-4 0.0 1.8097641231927057 0.0013852941604864076 54-55 1.58319332627018E-5 2.2956303230917612E-4 0.0 2.0917071067015307 0.001440705926905864 56-57 1.58319332627018E-5 2.533109322032288E-4 0.0 2.414013604063614 0.0014565378601685659 58-59 1.58319332627018E-5 2.8497479872863245E-4 0.0 2.7629177493070363 0.0014723697934312676 60-61 1.58319332627018E-5 3.008067319913342E-4 0.0 3.138071239900018 0.0015119496265880222 62-63 1.58319332627018E-5 3.008067319913342E-4 0.0 3.531502697444789 0.0016306891260582856 64-65 1.58319332627018E-5 3.324705985167378E-4 0.0 3.9556560214858334 0.0016386050926896364 66-67 1.58319332627018E-5 3.324705985167378E-4 0.0 4.424051683029497 0.0016544370259523383 68-69 1.58319332627018E-5 3.324705985167378E-4 0.0 4.946956690796644 0.001678184925846391 70-71 1.58319332627018E-5 3.4038656514808873E-4 0.0 5.516114691590774 0.0017098487923717946 72-73 1.58319332627018E-5 3.4830253177943964E-4 0.0 6.114886323552787 0.0019869076244690763 74-75 1.58319332627018E-5 3.5621849841079055E-4 0.0 6.738949468901966 0.0020185714909944797 76-77 1.58319332627018E-5 3.7996639830484324E-4 0.0 7.414197254489461 0.0020423193908885324 78-79 1.58319332627018E-5 3.7996639830484324E-4 0.0 8.149479731009121 0.0020423193908885324 80-81 1.58319332627018E-5 3.8788236493619415E-4 0.0 8.926328948310005 0.002058151324151234 82-83 1.58319332627018E-5 3.9579833156754506E-4 0.0 9.73447789767125 0.0021452269570960943 84-85 1.58319332627018E-5 3.9579833156754506E-4 0.0 10.568068763785655 0.002153142923727445 86-87 1.58319332627018E-5 4.1163026483024683E-4 0.0 11.43621282424591 0.0022006387235155504 88-89 1.58319332627018E-5 4.1163026483024683E-4 0.0 12.360742315021275 0.0022560504899350065 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 11085 0.0 44.268024 1 GGTATCA 5970 0.0 43.44996 1 TCAACGC 14725 0.0 32.0265 4 TATCAAC 14915 0.0 31.902815 2 CAACGCA 15040 0.0 31.418636 5 ATCAACG 15490 0.0 30.536795 3 AACGCAG 16085 0.0 29.460886 6 GTACATG 23035 0.0 25.414648 1 TACATGG 23645 0.0 24.40178 2 ACGCAGA 19295 0.0 24.116686 7 ACATGGG 24600 0.0 22.64532 3 CGCAGAG 20540 0.0 22.377129 8 CATGGGG 19115 0.0 20.29847 4 GCAGAGT 22075 0.0 19.614416 9 AGAGTAC 18800 0.0 17.790108 10-11 ATGGGGG 10585 0.0 16.780035 5 GTGGTAT 3745 0.0 16.776035 1 GTATAGG 1210 0.0 16.5208 1 AGTACAT 17585 0.0 16.445969 2 GAGTACA 18570 0.0 16.403452 1 >>END_MODULE